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Do url-encode resource ids
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Find all the ROIs in img and returns a similar volume with the ROIs emptied, keeping only their border voxels. This is useful for DTI tractography. Parameters ---------- img: img-like object or str Can either be: - a file path to a Nifti image - any object with get_data() a...
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Check if IP is local
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Make a pybtex BibliographyData instance from standard lsst-texmf bibliography files and user-supplied bibtex content. Parameters ---------- lsst_bib_names : sequence of `str`, optional Names of lsst-texmf BibTeX files to include. For example: .. code-block:: python ['lsst',...
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Sets byte if not overflow. :param cpu: current CPU. :param dest: destination operand.
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Save the current metric value and see if the model's performance has 'leveled off.' We do this by looking at some number of previous number of recordings
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pip install requirements-parser fname='requirements.txt'
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Returns the mean fractionalized bias error
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Return the MLIPNS distance between two strings. This is a wrapper for :py:meth:`MLIPNS.dist`. Parameters ---------- src : str Source string for comparison tar : str Target string for comparison threshold : float A number [0, 1] indicating the maximum similarity score, b...
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Returns the indices that would sort a indexable object. This is similar to `numpy.argsort`, but it is written in pure python and works on both lists and dictionaries. Args: indexable (Iterable or Mapping): indexable to sort by key (Callable, optional): customizes the ordering of the index...
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Activate window. @param window_name: Window name to look for, either full name, LDTP's name convention, or a Unix glob. @type window_name: string @return: 1 on success. @rtype: integer
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Register an io-handler with the glib main loop.
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Updates the branch such that all possible future routes are added. Should NOT be overwritten! Instead, overwrite _predict_hook(). :type my_task: Task :param my_task: The associated task in the task tree. :type seen: list[taskspec] :param seen: A list of already visited tasks....
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`Shapely`_ style contour formatter. Contours are returned as a list of :class:`shapely.geometry.LineString`, :class:`shapely.geometry.LinearRing`, and :class:`shapely.geometry.Point` geometry elements. Filled contours return a list of :class:`shapely.geometry.Polygon` elements instead. .. not...
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Assets if the requested operations are allowed in this context.
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End I2C transaction and get response bytes, including ACKs.
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Generate the HTML page and save it.
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Get URL to allow others to join a group conversation.
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Create an API subclass with fewer methods than its base class. Arguments: name (:py:class:`str`): The name of the new class. docstring (:py:class:`str`): The docstring for the new class. remove_methods (:py:class:`dict`): The methods to remove from the base class's :py:attr:`API_METHODS` ...
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Parses an operand from buf :param buf: a buffer :type buf: iterator/generator/string
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Set a configuration value. If no filename is specified, the property is set in the first configuration file. Note that if a filename is specified and the property path is present in an earlier filename then set property will be hidden. usage: set('section...
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Retrieves the organizations linked to the specified course
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Write the fields of a single review to out.
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Delete ContentMetadataItemTransmision models associated with the given content metadata items.
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Write the current config to disk to store them.
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Lookup country for IP address.
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Setup a mask where unmasked pixels are within an elliptical annulus of input inner and outer arc second \ major-axis and centre. Parameters ---------- shape: (int, int) The (y,x) shape of the mask in units of pixels. pixel_scale: float The arc-second to p...
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Pad the heatmaps on their sides so that they match a target aspect ratio. Depending on which dimension is smaller (height or width), only the corresponding sides (left/right or top/bottom) will be padded. In each case, both of the sides will be padded equally. Parameters ------...
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Returns Fasta object with the same name, of the bases from start to end, but not including end
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Return a CouchDB database instance from a database string.
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r'''Method to calculate viscosity of a liquid mixture at temperature `T`, pressure `P`, mole fractions `zs` and weight fractions `ws` with a given method. This method has no exception handling; see `mixture_property` for that. Parameters ---------- T : float ...
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Create a link bitstream. :param token: A valid token for the user in question. :type token: string :param folder_id: The id of the folder in which to create a new item that will contain the link. The new item will have the same name as the URL unless an item name is supp...
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Extract the image pixels within the polygon. This function will zero-pad the image if the polygon is partially/fully outside of the image. Parameters ---------- image : (H,W) ndarray or (H,W,C) ndarray The image from which to extract the pixels within the polygon. ...
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Checks whether to add particles at a given position by seeing if adding the particle improves the fit of the state. Parameters ---------- st : :class:`peri.states.State` The state to check adding particles to. guess : [N,3] list-like The positions of particles to check to add. r...
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Gets the Nginx config for the project
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UserWarning if array contains non-finite elements
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Stop the builder if it's running.
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Determine the molar mass of a chemical compound. The molar mass is usually the mass of one mole of the substance, but here it is the mass of 1000 moles, since the mass unit used in auxi is kg. :param compound: Formula of a chemical compound, e.g. 'Fe2O3'. :returns: Molar mass. [kg/kmol]
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Connects to a voice channel.
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Return ArgumentParser with any extra arguments.
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Takes a base91 char string and returns decimal
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Add provider required arguments epilog message, parse, and validate.
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Delete a milestone request
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return probability of base call
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Set algorithms used for sealing. Defaults can not be overridden.
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Calculate slope and aspect map. Return a pair of arrays 2 pixels smaller than the input elevation array. Slope is returned in radians, from 0 for sheer face to pi/2 for flat ground. Aspect is returned in radians, counterclockwise from -pi at north around to pi. Logic here is borrowed from hillsha...
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A decorator to register namespace conversions. Usage ----- >>> @conversion('tag_open', 'tag_.*') ... def tag_to_open(annotation): ... annotation.namespace = 'tag_open' ... return annotation
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Sync a bucket. Force all API calls to S3 and populate the database with the current state of S3.
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Return an ExtractedLicense object to represent a license object. But does not add it to the SPDXDocument model. Return None if failed.
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Custom grouping from a given serialized string This class is created for compatibility with ``custom_serialized(cls, java_serialized)`` method of StreamParse API, although its functionality is not yet implemented (Java-serialized). Currently only custom grouping implemented in Python is supported, and ``cu...
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Copies template files to a given directory. :param str src: The path to output the template lambda project files. :param bool minimal: Minimal possible template files (excludes event.json).
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Perform the bulk of the work of collectmedia. Split off from handle() to facilitate testing.
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Return the prefix similarity of two strings. Prefix similarity is the ratio of the length of the shorter term that exactly matches the longer term to the length of the shorter term, beginning at the start of both terms. Parameters ---------- src : str Source...
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Read the maximum volume level of the device.
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Iterate over complete graphs. Args: start (int/iterable): Define the size of the starting graph. If an int, the nodes will be index-labeled, otherwise should be an iterable of node labels. stop (int): Stops yielding graphs when the size equals stop. ...
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Can edit this object
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Return the number of seconds until this token expires. If token_expiry is in the past, this method will return 0, meaning the token has already expired. If token_expiry is None, this method will return None. Note that returning 0 in such a case would not be fair: the token may still be...
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Convert this unnormalized batch to an instance of Batch. As this method is intended to be called before augmentation, it assumes that none of the ``*_aug`` attributes is yet set. It will produce an AssertionError otherwise. The newly created Batch's ``*_unaug`` attributes will match th...
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Make a factor eliminating var by summing over its values.
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Build a file-download event.
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Load roster from an XML file. Can be used before the connection is started to load saved roster copy, for efficient retrieval of versioned roster. :Parameters: - `source`: file name or a file object :Types: - `source`: `str` or file-like object
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Get prediction results for all prediction steps.
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This checks the AWS instance data URL to see if there's a pending shutdown for the instance. This is useful for AWS spot instances. If there is a pending shutdown posted to the instance data URL, we'll use the result of this function break out of the processing loop and shut everything down ASAP before...
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Get count of rows in table object. @param window_name: Window name to look for, either full name, LDTP's name convention, or a Unix glob. @type window_name: string @param object_name: Object name to look for, either full name, LDTP's name convention, or a Unix glob. Or menu heir...
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Mark message instance as read for user. Returns True if the message was `unread` and thus actually marked as `read` or False in case it is already `read` or it does not exist at all. :param user: user instance for the recipient :param message: a Message instance to mark as read
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Update ContentMetadataItemTransmision models for the given content metadata items.
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Sets the review date. Raises CardinalityError if already set. OrderError if no reviewer defined before. Raises SPDXValueError if invalid reviewed value.
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Looks for modules with amtching entry points.
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Overrides the default serializer for `JSONEncoder`. This can serialize the following objects in addition to what `JSONEncoder` can already do. - `np.array` - `bytes` - `complex` - `np.float64` and other `np.dtype` objects Parameters ---------- ...
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Sending ICMP packets. :return: ``ping`` command execution result. :rtype: :py:class:`.PingResult` :raises ValueError: If parameters not valid.
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Get the OS distribution ID. Example:: from burlap.system import distrib_id if distrib_id() != 'Debian': abort(u"Distribution is not supported")
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Close the connection.
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Check whether role is allowed to access resource :param role: Role to be checked. :param method: Method to be checked. :param resource: View function to be checked.
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Get the changeset using the OSM API and return the content as a XML ElementTree. Args: changeset: the id of the changeset.
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Disable the FTDI drivers for the current platform. This is necessary because they will conflict with libftdi and accessing the FT232H. Note you can enable the FTDI drivers again by calling enable_FTDI_driver.
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Convert a JSON representation into Value message.
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r"""Computes the equivalent noise bandwidth .. math:: ENBW = N \frac{\sum_{n=1}^{N} w_n^2}{\left(\sum_{n=1}^{N} w_n \right)^2} .. doctest:: >>> from spectrum import create_window, enbw >>> w = create_window(64, 'rectangular') >>> enbw(w) 1.0 The following table contains t...
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Ripped off and slightly modified based on docker-py's kwargs_from_env utility function.
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Takes one or more index files and optionally one structure file and returns a path for a new merged index file. :param args: index files and zero or one structure file :return: path for the new merged index file
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Returns a version of a path that is unique. Given two paths path1 and path2: CanonicalPath(path1) == CanonicalPath(path2) if and only if they represent the same file on the host OS. Takes account of case, slashes and relative paths. :param unicode path: The original path. :rtype: ...
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Start SASL authentication process. [initiating entity only] :Parameters: - `username`: user name. - `authzid`: authorization ID. - `mechanism`: SASL mechanism to use.
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Takes an HTML hex code and converts it to a proper hue value
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Dumps data as nicely formatted JSON string to a file or file handle :param dict data: a dictionary to dump :param file: a filename or file handle to write to :param kwds: keywords to pass to json.dump
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Press scrollbar left with number of iterations @param window_name: Window name to type in, either full name, LDTP's name convention, or a Unix glob. @type window_name: string @param object_name: Object name to type in, either full name, LDTP's name convention, or a Unix glob. ...
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Return the description of the courserun content item.
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Load all the files in a given directory selecting only files with the given extension if specified. The given kwargs are passed through to the normal constructor.
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Move a thing to a new location.
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Run WsgiDAV using paste.httpserver, if Paste is installed. See http://pythonpaste.org/modules/httpserver.html for more options
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Iterative transformation generator Applies the deformation to an input jams object. This generates a sequence of deformed output JAMS. Parameters ---------- jam : jams.JAMS The jam to transform Examples -------- >>> for jam_out in deformer....
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Return True if the affine matrix of one_img is close to the affine matrix of another_img. False otherwise. Parameters ---------- one_img: nibabel.Nifti1Image another_img: nibabel.Nifti1Image only_check_3d: bool If True will extract only the 3D part of the affine matrices when they hav...
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Establish an ssh tunnel for each local host and port that can be used to communicate with the state host.
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Add a new, empty knitting pattern to the set. :param id_: the id of the pattern :param name: the name of the pattern to add or if :obj:`None`, the :paramref:`id_` is used :return: a new, empty knitting pattern :rtype: knittingpattern.KnittingPattern.KnittingPattern
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Gets the cell with the smallest number of segments. Break ties randomly. :param random: (Object) Random number generator. Gets mutated. :param cells: (list) Indices of cells. :param connections: (Object) Connections instance for the TM. :returns: (int) Cell index.
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Try to obtain the wif key from the wallet by telling which account and permission is supposed to sign the transaction
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Load WMT'15 English-to-French translation dataset. It will download the data from the WMT'15 Website (10^9-French-English corpus), and the 2013 news test from the same site as development set. Returns the directories of training data and test data. Parameters ---------- path : str The path...
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Returns names of 'object' columns in the DataFrame.
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Copy a dataset to a different location.
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Return the first child characteristic found that has the specified UUID. Will return None if no characteristic that matches is found.
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Validates the tpa_user_id, if is given, to see if there is an existing EnterpriseCustomerUser for it. It first uses the third party auth api to find the associated username to do the lookup.
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Returns the database ID for specified address. The ID might be useful as array index. 0 is unknown. :arg addr: IPv4 or IPv6 address (eg. 203.0.113.30)