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Add values to the field i.
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Clean email form field Returns: str: the cleaned value, converted to an email address (or an empty string)
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Print error message to stderr, using ANSI-colors. :param message: Message to print :param wrap: Wrap message into ``ERROR: <message>. Exit...`` template. By default: True
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Fetch event for issues and pull requests @return [Array] array of fetched issues
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Parse the document handle. Sets the ``_series``, ``_serial``, and ``_handle`` attributes.
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Set the lo stop values for this object's degrees of freedom. Parameters ---------- lo_stops : float or sequence of float A lo stop value to set on all degrees of freedom, or a list containing one such value for each degree of freedom. For rotational degrees o...
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Return a list of all implemented keyrings that can be constructed without parameters.
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Provide a label for a list of labels. The items in the list of labels are assumed to be either instances of :class:`Label`, or dicts with at least the key `label` in them. These will be passed to the :func:`dict_to_label` function. This method tries to find a label by looking if there's a pref lab...
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Clone a remote git repository to a local path. :param git_uri: the URI to the git repository to be cloned :return: the generated local path where the repository has been cloned to
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Takes a record and returns true if record meets filter criteria, false otherwise
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Returns absolute paths of files that match the regex within file_dir and all its children folders. Note: The regex matching is done using the search function of the re module. Parameters ---------- folder_path: string regex: string Returns ------- A list of strings.
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Make a copy of a dictionary with all keys converted to camel case. This is just calls to_camel_case on each of the keys in the dictionary and returns a new dictionary. :param obj: Dictionary to convert keys to camel case. :return: Dictionary with the input values and all keys in camel case
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Convert an ISO-8601 datetime string to a Unix epoch timestamp in some magnitude. By default, returns seconds.
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Transforms the object into an acceptable format for transmission. @throws ValueError To indicate this serializer does not support the encoding of the specified object.
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List of angles for rotational degrees of freedom.
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Serialize an XML element into a unicode string. This should work the same on Python2 and Python3 and with all :etree:`ElementTree` implementations. :Parameters: - `element`: the XML element to serialize :Types: - `element`: :etree:`ElementTree.Element`
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Perform inference for a single step. Given an SDR input and a weight matrix, return a predicted distribution. :param patternNZ: list of the active indices from the output below :param weightMatrix: numpy array of the weight matrix :return: numpy array of the predicted class label distribution
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Shows predictions of the TM when presented with the characters A, B, C, D, X, and Y without any contextual information, that is, not embedded within a sequence.
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Take the binding predictions returned by IEDB's web API and parse them into a DataFrame Expect response to look like: allele seq_num start end length peptide ic50 percentile_rank HLA-A*01:01 1 2 10 9 LYNTVATLY 2145.70 3.7 HLA-A*01:01 1 5 13 9 TVATLYCVH 2216.49 3.9 HLA-A*...
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Called to verify that the given rule can become a child of the current node. :raises AttributeError: if the child is not allowed
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issue.xml from Elsevier assume the existence of a local DTD. This procedure install the DTDs next to the issue.xml file and normalize it using xmllint in order to resolve all namespaces and references.
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This is sent to all in the sockets in this particular Namespace, including itself.
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Takes a CALLSIGN and returns passcode
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Pushes a value onto the stack. Decrements the stack pointer and then stores the source operand on the top of the stack. :param cpu: current CPU. :param src: source operand.
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Count in how many edges each annotation appears in a graph :param graph: A BEL graph :param annotation: The annotation to count :return: A Counter from {annotation value: frequency}
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Send an email to invite a non-Google contact to Hangouts.
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This adds a new LC format to the astrobase LC format registry. Allows handling of custom format light curves for astrobase lcproc drivers. Once the format is successfully registered, light curves should work transparently with all of the functions in this module, by simply calling them with the `format...
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Maps a single transaction row to a dictionary. Parameters ---------- txn : pd.DataFrame A single transaction object to convert to a dictionary. Returns ------- dict Mapped transaction.
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Uploads selected file to the host, thanks to the fact that every pomf.se based site has pretty much the same architecture.
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Get object properties. @param window_name: Window name to look for, either full name, LDTP's name convention, or a Unix glob. @type window_name: string @param object_name: Object name to look for, either full name, LDTP's name convention, or a Unix glob. @type object_nam...
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Retrieves a list of volumes attached to the server. :param datacenter_id: The unique ID of the data center. :type datacenter_id: ``str`` :param server_id: The unique ID of the server. :type server_id: ``str`` :param depth: The depth of the response d...
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Delete a cart. :param store_id: The store id. :type store_id: :py:class:`str` :param cart_id: The id for the cart. :type cart_id: :py:class:`str` :param line_id: The id for the line item of a cart. :type line_id: :py:class:`str`
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Return presence status for a list of users.
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Returns list of suggested spelling corrections for the given query.
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Process bounds as defined in the configuration.
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This method finds the time range which covers all the Run_Steps :param run_steps: list of Run_Step objects :return: tuple of start and end timestamps
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Gets a neighborhood of inputs. Simply calls topology.wrappingNeighborhood or topology.neighborhood. A subclass can insert different topology behavior by overriding this method. :param centerInput (int) The center of the neighborhood. @returns (1D numpy array of integers) The inputs in the ne...
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r'''This function handles the retrieval of a chemical's dipole moment. Lookup is based on CASRNs. Will automatically select a data source to use if no Method is provided; returns None if the data is not available. Prefered source is 'CCCBDB'. Considerable variation in reported data has found. Para...
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Creates a lambda function to read DICOM files. If store_store_metadata is False, will only return the file path. Else if you give header_fields, will return only the set of of header_fields within a DicomFile object or the whole DICOM file if None. :return: function This...
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Deserializes model from checkpointDir using capnproto
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get scheduler location
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Internal utility function for Unified Job Templates. Returns data about the last job run off of that UJT
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Return the updated program data dictionary. Arguments: instance (dict): The program data. Returns: dict: The updated program data.
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Called when GATT characteristics have been discovered.
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Truncate the supplied text for display. Arguments: text (:py:class:`str`): The text to truncate. max_len (:py:class:`int`, optional): The maximum length of the text before truncation (defaults to 350 characters). end (:py:class:`str`, optional): The ending to use to show that the ...
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Effective process bounds required to initialize inputs. Process bounds sometimes have to be larger, because all intersecting process tiles have to be covered as well.
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Start establishing TCP connection with given address. One of: `port` or `service` must be provided and `addr` must be a domain name and not an IP address if `port` is not given. When `service` is given try an SRV lookup for that service at domain `addr`. If `service` is not given or `a...
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validate extra link
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Implements the '==' operator, which does type JS-style coertion.
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Swap stereo channels. If the input is not stereo, pairs of channels are swapped, and a possible odd last channel passed through. E.g., for seven channels, the output order will be 2, 1, 4, 3, 6, 5, 7. See Also ---------- remix
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Add another chem material package to this material package. :param other: The other material package.
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Returns the current gamepad state. Buttons pressed is shown as a raw integer value. Use rController.buttons for a list of buttons pressed.
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Makes the HTTP request.
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Parse all file contributors and adds them to the model.
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Primitive string formatter. The only directives understood are the following: ============ ========================== Directive meaning ============ ========================== %d day as integer %H hour [00-23] %h ...
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Get trip counts per day between the start and end day of the feed. Returns ------- trip_counts : pandas.DataFrame Has columns "date_str" (dtype str) "trip_counts" (dtype int)
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Return a node representing package verification code.
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Return a new Streamlet by left join_streamlet with this streamlet
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Runs methods services have requested be run before each deployment.
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Fetches experiences for given indices. Args: indices: Index tensor Returns: Batch of experiences
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Provide a timzeone-aware object for a given datetime and timezone name
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Get the data in the image without having a side effect on the Nifti1Image object Parameters ---------- img: Nifti1Image Returns ------- np.ndarray
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Return a list of strings formatted as HTML bibliography entries
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wrap a function that returns a dir, making sure it exists
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Generates the string representation of a MetricSpec object, and returns the metric key associated with the metric. Parameters: ----------------------------------------------------------------------- inferenceElement: An InferenceElement value that indicates which part of the inference this metric is c...
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Write FIR Filter Header Files Mark Wickert February 2015
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Render the segmentation map as an RGB image. Parameters ---------- size : None or float or iterable of int or iterable of float, optional Size of the rendered RGB image as ``(height, width)``. See :func:`imgaug.imgaug.imresize_single_image` for details. If se...
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Path join helper method Join paths if list passed :type path: str|unicode|list :rtype: str|unicode
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revoke_token removes the access token from the data_store
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Separates particles into convenient groups for optimization. Given a state, returns a list of groups of particles. Each group of particles are located near each other in the image. Every particle located in the desired region is contained in exactly 1 group. Parameters ---------- s : :class:`p...
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Attempt to detect if a device at this address is present on the I2C bus. Will send out the device's address for writing and verify an ACK is received. Returns true if the ACK is received, and false if not.
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Add class options to argparser options. :param cliez.component.Component klass: subclass of Component :param Namespace sub_parsers: :param str default_epilog: default_epilog :param list general_arguments: global options, defined by user :return: Namespace subparser
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Format `pdblp` outputs to column-based results Args: data: `pdblp` result source: `bdp` or `bds` col_maps: rename columns with these mappings Returns: pd.DataFrame Examples: >>> format_output( ... data=pd.read_pickle('xbbg/tests/data/sample_bdp.pkl'), ...
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Calculate dendrite segment activity, using the current active cells. :param learn: (bool) If true, segment activations will be recorded. This information is used during segment cleanup. **Pseudocode:** :: for each distal dendrite segment with activity >= activationThreshold ...
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Return the SVG dict for the SVGBuilder. :param instruction_or_id: the instruction or id, see :meth:`get_instruction_id` :param bool copy_result: whether to copy the result :rtype: dict The result is cached.
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Filters the lst using pattern. If pattern starts with '(' it will be considered a re regular expression, otherwise it will use fnmatch filter. :param lst: list of strings :param pattern: string :return: list of strings Filtered list of strings
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Send TCP command to hub and return response.
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Supervisor can take a very long time to start and stop, so wait for it.
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List all files in all app storages.
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Get the label for the metric being optimized. This function also caches the label in the instance variable self._optimizedMetricLabel Parameters: ----------------------------------------------------------------------- metricLabels: A sequence of all the labels being computed for this model Retur...
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Convert this polygon to a Shapely polygon. Returns ------- shapely.geometry.Polygon The Shapely polygon matching this polygon's exterior.
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Is the token valid? This method only checks the timestamps within the token and compares them against the current time if none is provided. :param time: The timestamp to validate against :type time: Union[int, None] :return: The validity of the token. :rtype: bool
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Finds the checkpoints from all last runs. Note that checkpoints are incremental, and this helper will not find previous checkpoints from earlier than the most recent run. It probably should be made to do so. Kwargs: - rundir(str) : Path to the runinfo directory Returns: - a list sui...
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Extract a name to index dictionary from 6dof settings xml
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Drag the left mouse button without modifiers pressed. Parameters: coordinates to click on screen (tuple (x, y)) dest coordinates to drag to (tuple (x, y)) interval to send event of btn down, drag and up Returns: None
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Copies a file from its location on the web to a designated place on the local machine. Args: file_path: Complete url of the file to copy, string (e.g. http://fool.com/input.css). target_path: Path and name of file on the local machine, string. (e.g. /directory/output.css) Returns: ...
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Decorator declaring the wrapped function to be a new-style task. May be invoked as a simple, argument-less decorator (i.e. ``@task``) or with arguments customizing its behavior (e.g. ``@task(alias='myalias')``). Please see the :ref:`new-style task <task-decorator>` documentation for details on how to ...
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Saves the training log, timestamp will be added automatically. Parameters ----------- kwargs : logging information Events, such as accuracy, loss, step number and etc. Examples --------- >>> db.save_training_log(accuracy=0.33, loss=0.98)
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Estimate whether the bounding box is fully inside the image area. Parameters ---------- image : (H,W,...) ndarray or tuple of int Image dimensions to use. If an ndarray, its shape will be used. If a tuple, it is assumed to represent the image shape ...
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Retrieve an object by its absolute name.
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Installs all the necessary packages necessary for managing virtual environments with pip.
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Imports a single experience to memory.
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Calculates the Schwarzenberg-Czerny AoV statistic at a test frequency. Parameters ---------- times,mags,errs : np.array The input time-series and associated errors. frequency : float The test frequency to calculate the theta statistic at. binsize : float The phase bin siz...
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Method to call to get a serializable object for json.dump or jsonify based on the target :return: dict
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Mark all message instances for a user as read. :param user: user instance for the recipient
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Gets a specific track
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Retrieves the most recent timestamp of the media in the static root. If last_timestamp is given, retrieves the first timestamp more recent than this value.
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Gets variable value from data dictionary.
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Starts HDLC controller's threads.
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Returns filepath where to store HyperSearch JobID Parameters: ---------------------------------------------------------------------- permWorkDir: Directory path for saved jobID file outputLabel: Label string for incorporating into file name for saved jobID retval: Filepath where to store Hyper...