sequence stringlengths 902 12k | docstring stringlengths 4 15.2k |
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{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'remove_listener'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'registration_id'}; {'id': '6', 'type': 'block', 'children': ['7']}; {'id': '7', 'type': 'try_statement', 'children': ['8', '20']}; {'id': '8', 'type': 'block', 'children': ['9', '18']}; {'id': '9', 'type': 'expression_statement', 'children': ['10']}; {'id': '10', 'type': 'call', 'children': ['11', '16']}; {'id': '11', 'type': 'attribute', 'children': ['12', '15']}; {'id': '12', 'type': 'attribute', 'children': ['13', '14']}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '14', 'type': 'identifier', 'children': [], 'value': '_listeners'}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'pop'}; {'id': '16', 'type': 'argument_list', 'children': ['17']}; {'id': '17', 'type': 'identifier', 'children': [], 'value': 'registration_id'}; {'id': '18', 'type': 'return_statement', 'children': ['19']}; {'id': '19', 'type': 'True', 'children': []}; {'id': '20', 'type': 'except_clause', 'children': ['21', '22']}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'KeyError'}; {'id': '22', 'type': 'block', 'children': ['23']}; {'id': '23', 'type': 'return_statement', 'children': ['24']}; {'id': '24', 'type': 'False', 'children': []} | Removes a lifecycle listener.
:param registration_id: (str), the id of the listener to be removed.
:return: (bool), ``true`` if the listener is removed successfully, ``false`` otherwise. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '9']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'first_order_score'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6', '7', '8']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'y'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'mean'}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'scale'}; {'id': '7', 'type': 'identifier', 'children': [], 'value': 'shape'}; {'id': '8', 'type': 'identifier', 'children': [], 'value': 'skewness'}; {'id': '9', 'type': 'block', 'children': ['10']}; {'id': '10', 'type': 'return_statement', 'children': ['11']}; {'id': '11', 'type': 'binary_operator', 'children': ['12', '16'], 'value': '/'}; {'id': '12', 'type': '()', 'children': ['13']}; {'id': '13', 'type': 'binary_operator', 'children': ['14', '15'], 'value': '-'}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'y'}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'mean'}; {'id': '16', 'type': 'call', 'children': ['17', '18']}; {'id': '17', 'type': 'identifier', 'children': [], 'value': 'float'}; {'id': '18', 'type': 'argument_list', 'children': ['19']}; {'id': '19', 'type': 'binary_operator', 'children': ['20', '21'], 'value': '*'}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'scale'}; {'id': '21', 'type': 'call', 'children': ['22', '25']}; {'id': '22', 'type': 'attribute', 'children': ['23', '24']}; {'id': '23', 'type': 'identifier', 'children': [], 'value': 'np'}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'abs'}; {'id': '25', 'type': 'argument_list', 'children': ['26']}; {'id': '26', 'type': 'binary_operator', 'children': ['27', '28'], 'value': '-'}; {'id': '27', 'type': 'identifier', 'children': [], 'value': 'y'}; {'id': '28', 'type': 'identifier', 'children': [], 'value': 'mean'} | GAS Laplace Update term using gradient only - native Python function
Parameters
----------
y : float
datapoint for the time series
mean : float
location parameter for the Laplace distribution
scale : float
scale parameter for the Laplace distribution
shape : float
tail thickness parameter for the Laplace distribution
skewness : float
skewness parameter for the Laplace distribution
Returns
----------
- Score of the Laplace family |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'load'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'filename'}; {'id': '6', 'type': 'block', 'children': ['7', '44']}; {'id': '7', 'type': 'try_statement', 'children': ['8', '32']}; {'id': '8', 'type': 'block', 'children': ['9']}; {'id': '9', 'type': 'with_statement', 'children': ['10', '20']}; {'id': '10', 'type': 'with_clause', 'children': ['11']}; {'id': '11', 'type': 'with_item', 'children': ['12']}; {'id': '12', 'type': 'as_pattern', 'children': ['13', '18']}; {'id': '13', 'type': 'call', 'children': ['14', '15']}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'open'}; {'id': '15', 'type': 'argument_list', 'children': ['16', '17']}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'filename'}; {'id': '17', 'type': 'string', 'children': [], 'value': "'rb'"}; {'id': '18', 'type': 'as_pattern_target', 'children': ['19']}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'fp'}; {'id': '20', 'type': 'block', 'children': ['21']}; {'id': '21', 'type': 'expression_statement', 'children': ['22']}; {'id': '22', 'type': 'assignment', 'children': ['23', '26']}; {'id': '23', 'type': 'attribute', 'children': ['24', '25']}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '25', 'type': 'identifier', 'children': [], 'value': 'counters'}; {'id': '26', 'type': 'call', 'children': ['27', '30']}; {'id': '27', 'type': 'attribute', 'children': ['28', '29']}; {'id': '28', 'type': 'identifier', 'children': [], 'value': 'cPickle'}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'load'}; {'id': '30', 'type': 'argument_list', 'children': ['31']}; {'id': '31', 'type': 'identifier', 'children': [], 'value': 'fp'}; {'id': '32', 'type': 'except_clause', 'children': ['33']}; {'id': '33', 'type': 'block', 'children': ['34', '42']}; {'id': '34', 'type': 'expression_statement', 'children': ['35']}; {'id': '35', 'type': 'call', 'children': ['36', '39']}; {'id': '36', 'type': 'attribute', 'children': ['37', '38']}; {'id': '37', 'type': 'identifier', 'children': [], 'value': 'logging'}; {'id': '38', 'type': 'identifier', 'children': [], 'value': 'debug'}; {'id': '39', 'type': 'argument_list', 'children': ['40', '41']}; {'id': '40', 'type': 'string', 'children': [], 'value': '"can\'t load counter from file: %s"'}; {'id': '41', 'type': 'identifier', 'children': [], 'value': 'filename'}; {'id': '42', 'type': 'return_statement', 'children': ['43']}; {'id': '43', 'type': 'False', 'children': []}; {'id': '44', 'type': 'return_statement', 'children': ['45']}; {'id': '45', 'type': 'True', 'children': []} | Load counters to file |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'get_port_bindings'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'container_config'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'client_config'}; {'id': '6', 'type': 'block', 'children': ['7', '11', '17', '23', '64']}; {'id': '7', 'type': 'expression_statement', 'children': ['8']}; {'id': '8', 'type': 'assignment', 'children': ['9', '10']}; {'id': '9', 'type': 'identifier', 'children': [], 'value': 'port_bindings'}; {'id': '10', 'type': 'dictionary', 'children': []}; {'id': '11', 'type': 'expression_statement', 'children': ['12']}; {'id': '12', 'type': 'assignment', 'children': ['13', '14']}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'if_ipv4'}; {'id': '14', 'type': 'attribute', 'children': ['15', '16']}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'client_config'}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'interfaces'}; {'id': '17', 'type': 'expression_statement', 'children': ['18']}; {'id': '18', 'type': 'assignment', 'children': ['19', '20']}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'if_ipv6'}; {'id': '20', 'type': 'attribute', 'children': ['21', '22']}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'client_config'}; {'id': '22', 'type': 'identifier', 'children': [], 'value': 'interfaces_ipv6'}; {'id': '23', 'type': 'for_statement', 'children': ['24', '27', '42']}; {'id': '24', 'type': 'pattern_list', 'children': ['25', '26']}; {'id': '25', 'type': 'identifier', 'children': [], 'value': 'exposed_port'}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'ex_port_bindings'}; {'id': '27', 'type': 'call', 'children': ['28', '31']}; {'id': '28', 'type': 'attribute', 'children': ['29', '30']}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'itertools'}; {'id': '30', 'type': 'identifier', 'children': [], 'value': 'groupby'}; {'id': '31', 'type': 'argument_list', 'children': ['32', '41']}; {'id': '32', 'type': 'call', 'children': ['33', '34']}; {'id': '33', 'type': 'identifier', 'children': [], 'value': 'sorted'}; {'id': '34', 'type': 'argument_list', 'children': ['35', '38']}; {'id': '35', 'type': 'attribute', 'children': ['36', '37']}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'container_config'}; {'id': '37', 'type': 'identifier', 'children': [], 'value': 'exposes'}; {'id': '38', 'type': 'keyword_argument', 'children': ['39', '40']}; {'id': '39', 'type': 'identifier', 'children': [], 'value': 'key'}; {'id': '40', 'type': 'identifier', 'children': [], 'value': '_get_ex_port'}; {'id': '41', 'type': 'identifier', 'children': [], 'value': '_get_ex_port'}; {'id': '42', 'type': 'block', 'children': ['43', '55']}; {'id': '43', 'type': 'expression_statement', 'children': ['44']}; {'id': '44', 'type': 'assignment', 'children': ['45', '46']}; {'id': '45', 'type': 'identifier', 'children': [], 'value': 'bind_list'}; {'id': '46', 'type': 'call', 'children': ['47', '48']}; {'id': '47', 'type': 'identifier', 'children': [], 'value': 'list'}; {'id': '48', 'type': 'argument_list', 'children': ['49']}; {'id': '49', 'type': 'call', 'children': ['50', '51']}; {'id': '50', 'type': 'identifier', 'children': [], 'value': '_get_port_bindings'}; {'id': '51', 'type': 'argument_list', 'children': ['52', '53', '54']}; {'id': '52', 'type': 'identifier', 'children': [], 'value': 'ex_port_bindings'}; {'id': '53', 'type': 'identifier', 'children': [], 'value': 'if_ipv4'}; {'id': '54', 'type': 'identifier', 'children': [], 'value': 'if_ipv6'}; {'id': '55', 'type': 'if_statement', 'children': ['56', '57']}; {'id': '56', 'type': 'identifier', 'children': [], 'value': 'bind_list'}; {'id': '57', 'type': 'block', 'children': ['58']}; {'id': '58', 'type': 'expression_statement', 'children': ['59']}; {'id': '59', 'type': 'assignment', 'children': ['60', '63']}; {'id': '60', 'type': 'subscript', 'children': ['61', '62']}; {'id': '61', 'type': 'identifier', 'children': [], 'value': 'port_bindings'}; {'id': '62', 'type': 'identifier', 'children': [], 'value': 'exposed_port'}; {'id': '63', 'type': 'identifier', 'children': [], 'value': 'bind_list'}; {'id': '64', 'type': 'return_statement', 'children': ['65']}; {'id': '65', 'type': 'identifier', 'children': [], 'value': 'port_bindings'} | Generates the input dictionary contents for the ``port_bindings`` argument.
:param container_config: Container configuration.
:type container_config: dockermap.map.config.container.ContainerConfiguration
:param client_config: Client configuration.
:type client_config: dockermap.map.config.client.ClientConfiguration
:return: Dictionary of ports with mapped port, and if applicable, with bind address
:rtype: dict[unicode | str, list[unicode | str | int | tuple]] |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '8']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'get'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'default_parameter', 'children': ['6', '7']}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'transform'}; {'id': '7', 'type': 'None', 'children': []}; {'id': '8', 'type': 'block', 'children': ['9', '29']}; {'id': '9', 'type': 'if_statement', 'children': ['10', '22']}; {'id': '10', 'type': 'boolean_operator', 'children': ['11', '17'], 'value': 'and'}; {'id': '11', 'type': 'not_operator', 'children': ['12']}; {'id': '12', 'type': 'call', 'children': ['13', '16']}; {'id': '13', 'type': 'attribute', 'children': ['14', '15']}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'has_expired'}; {'id': '16', 'type': 'argument_list', 'children': []}; {'id': '17', 'type': 'comparison_operator', 'children': ['18', '21'], 'value': 'is not'}; {'id': '18', 'type': 'attribute', 'children': ['19', '20']}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '20', 'type': 'identifier', 'children': [], 'value': '_cached_copy'}; {'id': '21', 'type': 'None', 'children': []}; {'id': '22', 'type': 'block', 'children': ['23']}; {'id': '23', 'type': 'return_statement', 'children': ['24']}; {'id': '24', 'type': 'expression_list', 'children': ['25', '28']}; {'id': '25', 'type': 'attribute', 'children': ['26', '27']}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '27', 'type': 'identifier', 'children': [], 'value': '_cached_copy'}; {'id': '28', 'type': 'False', 'children': []}; {'id': '29', 'type': 'return_statement', 'children': ['30']}; {'id': '30', 'type': 'expression_list', 'children': ['31', '37']}; {'id': '31', 'type': 'call', 'children': ['32', '35']}; {'id': '32', 'type': 'attribute', 'children': ['33', '34']}; {'id': '33', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '34', 'type': 'identifier', 'children': [], 'value': '_refresh_cache'}; {'id': '35', 'type': 'argument_list', 'children': ['36']}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'transform'}; {'id': '37', 'type': 'True', 'children': []} | Return the JSON defined at the S3 location in the constructor.
The get method will reload the S3 object after the TTL has
expired.
Fetch the JSON object from cache or S3 if necessary |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_rle'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'a'}; {'id': '6', 'type': 'block', 'children': ['7', '16', '23', '43', '60', '76', '96']}; {'id': '7', 'type': 'expression_statement', 'children': ['8']}; {'id': '8', 'type': 'assignment', 'children': ['9', '10']}; {'id': '9', 'type': 'identifier', 'children': [], 'value': 'ia'}; {'id': '10', 'type': 'call', 'children': ['11', '14']}; {'id': '11', 'type': 'attribute', 'children': ['12', '13']}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'np'}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'asarray'}; {'id': '14', 'type': 'argument_list', 'children': ['15']}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'a'}; {'id': '16', 'type': 'expression_statement', 'children': ['17']}; {'id': '17', 'type': 'assignment', 'children': ['18', '19']}; {'id': '18', 'type': 'identifier', 'children': [], 'value': 'n'}; {'id': '19', 'type': 'call', 'children': ['20', '21']}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'len'}; {'id': '21', 'type': 'argument_list', 'children': ['22']}; {'id': '22', 'type': 'identifier', 'children': [], 'value': 'ia'}; {'id': '23', 'type': 'expression_statement', 'children': ['24']}; {'id': '24', 'type': 'assignment', 'children': ['25', '26']}; {'id': '25', 'type': 'identifier', 'children': [], 'value': 'y'}; {'id': '26', 'type': 'call', 'children': ['27', '30']}; {'id': '27', 'type': 'attribute', 'children': ['28', '29']}; {'id': '28', 'type': 'identifier', 'children': [], 'value': 'np'}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'array'}; {'id': '30', 'type': 'argument_list', 'children': ['31']}; {'id': '31', 'type': 'comparison_operator', 'children': ['32', '37'], 'value': '!='}; {'id': '32', 'type': 'subscript', 'children': ['33', '34']}; {'id': '33', 'type': 'identifier', 'children': [], 'value': 'ia'}; {'id': '34', 'type': 'slice', 'children': ['35', '36']}; {'id': '35', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '36', 'type': 'colon', 'children': []}; {'id': '37', 'type': 'subscript', 'children': ['38', '39']}; {'id': '38', 'type': 'identifier', 'children': [], 'value': 'ia'}; {'id': '39', 'type': 'slice', 'children': ['40', '41']}; {'id': '40', 'type': 'colon', 'children': []}; {'id': '41', 'type': 'unary_operator', 'children': ['42'], 'value': '-'}; {'id': '42', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '43', 'type': 'expression_statement', 'children': ['44']}; {'id': '44', 'type': 'assignment', 'children': ['45', '46']}; {'id': '45', 'type': 'identifier', 'children': [], 'value': 'i'}; {'id': '46', 'type': 'call', 'children': ['47', '50']}; {'id': '47', 'type': 'attribute', 'children': ['48', '49']}; {'id': '48', 'type': 'identifier', 'children': [], 'value': 'np'}; {'id': '49', 'type': 'identifier', 'children': [], 'value': 'append'}; {'id': '50', 'type': 'argument_list', 'children': ['51', '57']}; {'id': '51', 'type': 'call', 'children': ['52', '55']}; {'id': '52', 'type': 'attribute', 'children': ['53', '54']}; {'id': '53', 'type': 'identifier', 'children': [], 'value': 'np'}; {'id': '54', 'type': 'identifier', 'children': [], 'value': 'where'}; {'id': '55', 'type': 'argument_list', 'children': ['56']}; {'id': '56', 'type': 'identifier', 'children': [], 'value': 'y'}; {'id': '57', 'type': 'binary_operator', 'children': ['58', '59'], 'value': '-'}; {'id': '58', 'type': 'identifier', 'children': [], 'value': 'n'}; {'id': '59', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '60', 'type': 'expression_statement', 'children': ['61']}; {'id': '61', 'type': 'assignment', 'children': ['62', '63']}; {'id': '62', 'type': 'identifier', 'children': [], 'value': 'z'}; {'id': '63', 'type': 'call', 'children': ['64', '67']}; {'id': '64', 'type': 'attribute', 'children': ['65', '66']}; {'id': '65', 'type': 'identifier', 'children': [], 'value': 'np'}; {'id': '66', 'type': 'identifier', 'children': [], 'value': 'diff'}; {'id': '67', 'type': 'argument_list', 'children': ['68']}; {'id': '68', 'type': 'call', 'children': ['69', '72']}; {'id': '69', 'type': 'attribute', 'children': ['70', '71']}; {'id': '70', 'type': 'identifier', 'children': [], 'value': 'np'}; {'id': '71', 'type': 'identifier', 'children': [], 'value': 'append'}; {'id': '72', 'type': 'argument_list', 'children': ['73', '75']}; {'id': '73', 'type': 'unary_operator', 'children': ['74'], 'value': '-'}; {'id': '74', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '75', 'type': 'identifier', 'children': [], 'value': 'i'}; {'id': '76', 'type': 'expression_statement', 'children': ['77']}; {'id': '77', 'type': 'assignment', 'children': ['78', '79']}; {'id': '78', 'type': 'identifier', 'children': [], 'value': 'p'}; {'id': '79', 'type': 'subscript', 'children': ['80', '92']}; {'id': '80', 'type': 'call', 'children': ['81', '84']}; {'id': '81', 'type': 'attribute', 'children': ['82', '83']}; {'id': '82', 'type': 'identifier', 'children': [], 'value': 'np'}; {'id': '83', 'type': 'identifier', 'children': [], 'value': 'cumsum'}; {'id': '84', 'type': 'argument_list', 'children': ['85']}; {'id': '85', 'type': 'call', 'children': ['86', '89']}; {'id': '86', 'type': 'attribute', 'children': ['87', '88']}; {'id': '87', 'type': 'identifier', 'children': [], 'value': 'np'}; {'id': '88', 'type': 'identifier', 'children': [], 'value': 'append'}; {'id': '89', 'type': 'argument_list', 'children': ['90', '91']}; {'id': '90', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '91', 'type': 'identifier', 'children': [], 'value': 'z'}; {'id': '92', 'type': 'slice', 'children': ['93', '94']}; {'id': '93', 'type': 'colon', 'children': []}; {'id': '94', 'type': 'unary_operator', 'children': ['95'], 'value': '-'}; {'id': '95', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '96', 'type': 'return_statement', 'children': ['97']}; {'id': '97', 'type': 'tuple', 'children': ['98', '99', '100']}; {'id': '98', 'type': 'identifier', 'children': [], 'value': 'z'}; {'id': '99', 'type': 'identifier', 'children': [], 'value': 'p'}; {'id': '100', 'type': 'subscript', 'children': ['101', '102']}; {'id': '101', 'type': 'identifier', 'children': [], 'value': 'ia'}; {'id': '102', 'type': 'identifier', 'children': [], 'value': 'i'} | rle implementation credit to Thomas Browne from his SOF post Sept 2015
Parameters
----------
a : array, shape[n,]
input vector
Returns
-------
z : array, shape[nt,]
run lengths
p : array, shape[nt,]
start positions of each run
ar : array, shape[nt,]
values for each run |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'rand_bivar'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'X'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'rho'}; {'id': '6', 'type': 'block', 'children': ['7', '12', '23', '35', '66']}; {'id': '7', 'type': 'import_statement', 'children': ['8']}; {'id': '8', 'type': 'aliased_import', 'children': ['9', '11']}; {'id': '9', 'type': 'dotted_name', 'children': ['10']}; {'id': '10', 'type': 'identifier', 'children': [], 'value': 'numpy'}; {'id': '11', 'type': 'identifier', 'children': [], 'value': 'np'}; {'id': '12', 'type': 'expression_statement', 'children': ['13']}; {'id': '13', 'type': 'assignment', 'children': ['14', '15']}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'Y'}; {'id': '15', 'type': 'call', 'children': ['16', '19']}; {'id': '16', 'type': 'attribute', 'children': ['17', '18']}; {'id': '17', 'type': 'identifier', 'children': [], 'value': 'np'}; {'id': '18', 'type': 'identifier', 'children': [], 'value': 'empty'}; {'id': '19', 'type': 'argument_list', 'children': ['20']}; {'id': '20', 'type': 'attribute', 'children': ['21', '22']}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'X'}; {'id': '22', 'type': 'identifier', 'children': [], 'value': 'shape'}; {'id': '23', 'type': 'expression_statement', 'children': ['24']}; {'id': '24', 'type': 'assignment', 'children': ['25', '30']}; {'id': '25', 'type': 'subscript', 'children': ['26', '27', '29']}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'Y'}; {'id': '27', 'type': 'slice', 'children': ['28']}; {'id': '28', 'type': 'colon', 'children': []}; {'id': '29', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '30', 'type': 'subscript', 'children': ['31', '32', '34']}; {'id': '31', 'type': 'identifier', 'children': [], 'value': 'X'}; {'id': '32', 'type': 'slice', 'children': ['33']}; {'id': '33', 'type': 'colon', 'children': []}; {'id': '34', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '35', 'type': 'expression_statement', 'children': ['36']}; {'id': '36', 'type': 'assignment', 'children': ['37', '42']}; {'id': '37', 'type': 'subscript', 'children': ['38', '39', '41']}; {'id': '38', 'type': 'identifier', 'children': [], 'value': 'Y'}; {'id': '39', 'type': 'slice', 'children': ['40']}; {'id': '40', 'type': 'colon', 'children': []}; {'id': '41', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '42', 'type': 'binary_operator', 'children': ['43', '50'], 'value': '+'}; {'id': '43', 'type': 'binary_operator', 'children': ['44', '45'], 'value': '*'}; {'id': '44', 'type': 'identifier', 'children': [], 'value': 'rho'}; {'id': '45', 'type': 'subscript', 'children': ['46', '47', '49']}; {'id': '46', 'type': 'identifier', 'children': [], 'value': 'X'}; {'id': '47', 'type': 'slice', 'children': ['48']}; {'id': '48', 'type': 'colon', 'children': []}; {'id': '49', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '50', 'type': 'binary_operator', 'children': ['51', '61'], 'value': '*'}; {'id': '51', 'type': 'call', 'children': ['52', '55']}; {'id': '52', 'type': 'attribute', 'children': ['53', '54']}; {'id': '53', 'type': 'identifier', 'children': [], 'value': 'np'}; {'id': '54', 'type': 'identifier', 'children': [], 'value': 'sqrt'}; {'id': '55', 'type': 'argument_list', 'children': ['56']}; {'id': '56', 'type': 'binary_operator', 'children': ['57', '58'], 'value': '-'}; {'id': '57', 'type': 'float', 'children': [], 'value': '1.0'}; {'id': '58', 'type': 'binary_operator', 'children': ['59', '60'], 'value': '**'}; {'id': '59', 'type': 'identifier', 'children': [], 'value': 'rho'}; {'id': '60', 'type': 'integer', 'children': [], 'value': '2'}; {'id': '61', 'type': 'subscript', 'children': ['62', '63', '65']}; {'id': '62', 'type': 'identifier', 'children': [], 'value': 'X'}; {'id': '63', 'type': 'slice', 'children': ['64']}; {'id': '64', 'type': 'colon', 'children': []}; {'id': '65', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '66', 'type': 'return_statement', 'children': ['67']}; {'id': '67', 'type': 'identifier', 'children': [], 'value': 'Y'} | Transform two unrelated random variables into correlated bivariate data
X : ndarray
two univariate random variables
with N observations as <N x 2> matrix
rho : float
The Pearson correlations coefficient
as number between [-1, +1] |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'highlight'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'str1'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'str2'}; {'id': '6', 'type': 'block', 'children': ['7', '12', '27']}; {'id': '7', 'type': 'expression_statement', 'children': ['8']}; {'id': '8', 'type': 'call', 'children': ['9', '10']}; {'id': '9', 'type': 'identifier', 'children': [], 'value': 'print'}; {'id': '10', 'type': 'argument_list', 'children': ['11']}; {'id': '11', 'type': 'string', 'children': [], 'value': "'------------------------------'"}; {'id': '12', 'type': 'try_statement', 'children': ['13', '20']}; {'id': '13', 'type': 'block', 'children': ['14']}; {'id': '14', 'type': 'expression_statement', 'children': ['15']}; {'id': '15', 'type': 'assignment', 'children': ['16', '17']}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'str2'}; {'id': '17', 'type': 'subscript', 'children': ['18', '19']}; {'id': '18', 'type': 'identifier', 'children': [], 'value': 'str2'}; {'id': '19', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '20', 'type': 'except_clause', 'children': ['21', '22']}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'IndexError'}; {'id': '22', 'type': 'block', 'children': ['23']}; {'id': '23', 'type': 'expression_statement', 'children': ['24']}; {'id': '24', 'type': 'assignment', 'children': ['25', '26']}; {'id': '25', 'type': 'identifier', 'children': [], 'value': 'str2'}; {'id': '26', 'type': 'None', 'children': []}; {'id': '27', 'type': 'if_statement', 'children': ['28', '31', '45']}; {'id': '28', 'type': 'boolean_operator', 'children': ['29', '30'], 'value': 'and'}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'str1'}; {'id': '30', 'type': 'identifier', 'children': [], 'value': 'str2'}; {'id': '31', 'type': 'block', 'children': ['32']}; {'id': '32', 'type': 'return_statement', 'children': ['33']}; {'id': '33', 'type': 'call', 'children': ['34', '37']}; {'id': '34', 'type': 'attribute', 'children': ['35', '36']}; {'id': '35', 'type': 'identifier', 'children': [], 'value': 'str1'}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'replace'}; {'id': '37', 'type': 'argument_list', 'children': ['38', '39']}; {'id': '38', 'type': 'identifier', 'children': [], 'value': 'str2'}; {'id': '39', 'type': 'call', 'children': ['40', '43']}; {'id': '40', 'type': 'attribute', 'children': ['41', '42']}; {'id': '41', 'type': 'string', 'children': [], 'value': '"<b>{}</b>"'}; {'id': '42', 'type': 'identifier', 'children': [], 'value': 'format'}; {'id': '43', 'type': 'argument_list', 'children': ['44']}; {'id': '44', 'type': 'identifier', 'children': [], 'value': 'str2'}; {'id': '45', 'type': 'else_clause', 'children': ['46']}; {'id': '46', 'type': 'block', 'children': ['47']}; {'id': '47', 'type': 'return_statement', 'children': ['48']}; {'id': '48', 'type': 'identifier', 'children': [], 'value': 'str1'} | Highlight str1 with the contents of str2. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'validate'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'value'}; {'id': '6', 'type': 'block', 'children': ['7', '20']}; {'id': '7', 'type': 'for_statement', 'children': ['8', '9', '12']}; {'id': '8', 'type': 'identifier', 'children': [], 'value': 'v'}; {'id': '9', 'type': 'attribute', 'children': ['10', '11']}; {'id': '10', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '11', 'type': 'identifier', 'children': [], 'value': 'validators'}; {'id': '12', 'type': 'block', 'children': ['13']}; {'id': '13', 'type': 'expression_statement', 'children': ['14']}; {'id': '14', 'type': 'call', 'children': ['15', '18']}; {'id': '15', 'type': 'attribute', 'children': ['16', '17']}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'v'}; {'id': '17', 'type': 'identifier', 'children': [], 'value': 'validate'}; {'id': '18', 'type': 'argument_list', 'children': ['19']}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'value'}; {'id': '20', 'type': 'return_statement', 'children': ['21']}; {'id': '21', 'type': 'True', 'children': []} | checks the validity of 'value' given the lits of validators |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '8']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'get_type_name'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'type_name'}; {'id': '5', 'type': 'default_parameter', 'children': ['6', '7']}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'sub_type'}; {'id': '7', 'type': 'None', 'children': []}; {'id': '8', 'type': 'block', 'children': ['9', '18', '25', '32', '56', '63', '70']}; {'id': '9', 'type': 'if_statement', 'children': ['10', '15']}; {'id': '10', 'type': 'comparison_operator', 'children': ['11', '12'], 'value': 'in'}; {'id': '11', 'type': 'identifier', 'children': [], 'value': 'type_name'}; {'id': '12', 'type': 'tuple', 'children': ['13', '14']}; {'id': '13', 'type': 'string', 'children': [], 'value': '"string"'}; {'id': '14', 'type': 'string', 'children': [], 'value': '"enum"'}; {'id': '15', 'type': 'block', 'children': ['16']}; {'id': '16', 'type': 'return_statement', 'children': ['17']}; {'id': '17', 'type': 'string', 'children': [], 'value': '"string"'}; {'id': '18', 'type': 'if_statement', 'children': ['19', '22']}; {'id': '19', 'type': 'comparison_operator', 'children': ['20', '21'], 'value': '=='}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'type_name'}; {'id': '21', 'type': 'string', 'children': [], 'value': '"float"'}; {'id': '22', 'type': 'block', 'children': ['23']}; {'id': '23', 'type': 'return_statement', 'children': ['24']}; {'id': '24', 'type': 'string', 'children': [], 'value': '"float64"'}; {'id': '25', 'type': 'if_statement', 'children': ['26', '29']}; {'id': '26', 'type': 'comparison_operator', 'children': ['27', '28'], 'value': '=='}; {'id': '27', 'type': 'identifier', 'children': [], 'value': 'type_name'}; {'id': '28', 'type': 'string', 'children': [], 'value': '"boolean"'}; {'id': '29', 'type': 'block', 'children': ['30']}; {'id': '30', 'type': 'return_statement', 'children': ['31']}; {'id': '31', 'type': 'string', 'children': [], 'value': '"bool"'}; {'id': '32', 'type': 'if_statement', 'children': ['33', '36']}; {'id': '33', 'type': 'comparison_operator', 'children': ['34', '35'], 'value': '=='}; {'id': '34', 'type': 'identifier', 'children': [], 'value': 'type_name'}; {'id': '35', 'type': 'string', 'children': [], 'value': '"list"'}; {'id': '36', 'type': 'block', 'children': ['37', '52']}; {'id': '37', 'type': 'expression_statement', 'children': ['38']}; {'id': '38', 'type': 'assignment', 'children': ['39', '40']}; {'id': '39', 'type': 'identifier', 'children': [], 'value': 'st'}; {'id': '40', 'type': 'conditional_expression', 'children': ['41', '50', '51'], 'value': 'if'}; {'id': '41', 'type': 'call', 'children': ['42', '43']}; {'id': '42', 'type': 'identifier', 'children': [], 'value': 'get_type_name'}; {'id': '43', 'type': 'argument_list', 'children': ['44', '47']}; {'id': '44', 'type': 'keyword_argument', 'children': ['45', '46']}; {'id': '45', 'type': 'identifier', 'children': [], 'value': 'type_name'}; {'id': '46', 'type': 'identifier', 'children': [], 'value': 'sub_type'}; {'id': '47', 'type': 'keyword_argument', 'children': ['48', '49']}; {'id': '48', 'type': 'identifier', 'children': [], 'value': 'sub_type'}; {'id': '49', 'type': 'None', 'children': []}; {'id': '50', 'type': 'identifier', 'children': [], 'value': 'sub_type'}; {'id': '51', 'type': 'string', 'children': [], 'value': '"interface{}"'}; {'id': '52', 'type': 'return_statement', 'children': ['53']}; {'id': '53', 'type': 'binary_operator', 'children': ['54', '55'], 'value': '%'}; {'id': '54', 'type': 'string', 'children': [], 'value': '"[]%s"'}; {'id': '55', 'type': 'identifier', 'children': [], 'value': 'st'}; {'id': '56', 'type': 'if_statement', 'children': ['57', '60']}; {'id': '57', 'type': 'comparison_operator', 'children': ['58', '59'], 'value': '=='}; {'id': '58', 'type': 'identifier', 'children': [], 'value': 'type_name'}; {'id': '59', 'type': 'string', 'children': [], 'value': '"integer"'}; {'id': '60', 'type': 'block', 'children': ['61']}; {'id': '61', 'type': 'return_statement', 'children': ['62']}; {'id': '62', 'type': 'string', 'children': [], 'value': '"int"'}; {'id': '63', 'type': 'if_statement', 'children': ['64', '67']}; {'id': '64', 'type': 'comparison_operator', 'children': ['65', '66'], 'value': '=='}; {'id': '65', 'type': 'identifier', 'children': [], 'value': 'type_name'}; {'id': '66', 'type': 'string', 'children': [], 'value': '"time"'}; {'id': '67', 'type': 'block', 'children': ['68']}; {'id': '68', 'type': 'return_statement', 'children': ['69']}; {'id': '69', 'type': 'string', 'children': [], 'value': '"float64"'}; {'id': '70', 'type': 'return_statement', 'children': ['71']}; {'id': '71', 'type': 'string', 'children': [], 'value': '"interface{}"'} | Returns a go type according to a spec type |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '12']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'medium_integer'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6', '9']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'column'}; {'id': '6', 'type': 'default_parameter', 'children': ['7', '8']}; {'id': '7', 'type': 'identifier', 'children': [], 'value': 'auto_increment'}; {'id': '8', 'type': 'False', 'children': []}; {'id': '9', 'type': 'default_parameter', 'children': ['10', '11']}; {'id': '10', 'type': 'identifier', 'children': [], 'value': 'unsigned'}; {'id': '11', 'type': 'False', 'children': []}; {'id': '12', 'type': 'block', 'children': ['13']}; {'id': '13', 'type': 'return_statement', 'children': ['14']}; {'id': '14', 'type': 'call', 'children': ['15', '18']}; {'id': '15', 'type': 'attribute', 'children': ['16', '17']}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '17', 'type': 'identifier', 'children': [], 'value': '_add_column'}; {'id': '18', 'type': 'argument_list', 'children': ['19', '20', '21', '24']}; {'id': '19', 'type': 'string', 'children': [], 'value': "'medium_integer'"}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'column'}; {'id': '21', 'type': 'keyword_argument', 'children': ['22', '23']}; {'id': '22', 'type': 'identifier', 'children': [], 'value': 'auto_increment'}; {'id': '23', 'type': 'identifier', 'children': [], 'value': 'auto_increment'}; {'id': '24', 'type': 'keyword_argument', 'children': ['25', '26']}; {'id': '25', 'type': 'identifier', 'children': [], 'value': 'unsigned'}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'unsigned'} | Create a new medium integer column on the table.
:param column: The column
:type column: str
:type auto_increment: bool
:type unsigned: bool
:rtype: Fluent |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '8']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'closest_pair'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'arr'}; {'id': '5', 'type': 'default_parameter', 'children': ['6', '7']}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'give'}; {'id': '7', 'type': 'string', 'children': [], 'value': '"indicies"'}; {'id': '8', 'type': 'block', 'children': ['9', '24', '28', '42', '107']}; {'id': '9', 'type': 'expression_statement', 'children': ['10']}; {'id': '10', 'type': 'assignment', 'children': ['11', '12']}; {'id': '11', 'type': 'identifier', 'children': [], 'value': 'idxs'}; {'id': '12', 'type': 'list_comprehension', 'children': ['13', '14']}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'idx'}; {'id': '14', 'type': 'for_in_clause', 'children': ['15', '16']}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'idx'}; {'id': '16', 'type': 'call', 'children': ['17', '20']}; {'id': '17', 'type': 'attribute', 'children': ['18', '19']}; {'id': '18', 'type': 'identifier', 'children': [], 'value': 'np'}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'ndindex'}; {'id': '20', 'type': 'argument_list', 'children': ['21']}; {'id': '21', 'type': 'attribute', 'children': ['22', '23']}; {'id': '22', 'type': 'identifier', 'children': [], 'value': 'arr'}; {'id': '23', 'type': 'identifier', 'children': [], 'value': 'shape'}; {'id': '24', 'type': 'expression_statement', 'children': ['25']}; {'id': '25', 'type': 'assignment', 'children': ['26', '27']}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'outs'}; {'id': '27', 'type': 'list', 'children': [], 'value': '[]'}; {'id': '28', 'type': 'expression_statement', 'children': ['29']}; {'id': '29', 'type': 'assignment', 'children': ['30', '31']}; {'id': '30', 'type': 'identifier', 'children': [], 'value': 'min_dist'}; {'id': '31', 'type': 'binary_operator', 'children': ['32', '37'], 'value': '-'}; {'id': '32', 'type': 'call', 'children': ['33', '36']}; {'id': '33', 'type': 'attribute', 'children': ['34', '35']}; {'id': '34', 'type': 'identifier', 'children': [], 'value': 'arr'}; {'id': '35', 'type': 'identifier', 'children': [], 'value': 'max'}; {'id': '36', 'type': 'argument_list', 'children': []}; {'id': '37', 'type': 'call', 'children': ['38', '41']}; {'id': '38', 'type': 'attribute', 'children': ['39', '40']}; {'id': '39', 'type': 'identifier', 'children': [], 'value': 'arr'}; {'id': '40', 'type': 'identifier', 'children': [], 'value': 'min'}; {'id': '41', 'type': 'argument_list', 'children': []}; {'id': '42', 'type': 'for_statement', 'children': ['43', '44', '45']}; {'id': '43', 'type': 'identifier', 'children': [], 'value': 'idxa'}; {'id': '44', 'type': 'identifier', 'children': [], 'value': 'idxs'}; {'id': '45', 'type': 'block', 'children': ['46']}; {'id': '46', 'type': 'for_statement', 'children': ['47', '48', '49']}; {'id': '47', 'type': 'identifier', 'children': [], 'value': 'idxb'}; {'id': '48', 'type': 'identifier', 'children': [], 'value': 'idxs'}; {'id': '49', 'type': 'block', 'children': ['50', '56', '69']}; {'id': '50', 'type': 'if_statement', 'children': ['51', '54']}; {'id': '51', 'type': 'comparison_operator', 'children': ['52', '53'], 'value': '=='}; {'id': '52', 'type': 'identifier', 'children': [], 'value': 'idxa'}; {'id': '53', 'type': 'identifier', 'children': [], 'value': 'idxb'}; {'id': '54', 'type': 'block', 'children': ['55']}; {'id': '55', 'type': 'continue_statement', 'children': []}; {'id': '56', 'type': 'expression_statement', 'children': ['57']}; {'id': '57', 'type': 'assignment', 'children': ['58', '59']}; {'id': '58', 'type': 'identifier', 'children': [], 'value': 'dist'}; {'id': '59', 'type': 'call', 'children': ['60', '61']}; {'id': '60', 'type': 'identifier', 'children': [], 'value': 'abs'}; {'id': '61', 'type': 'argument_list', 'children': ['62']}; {'id': '62', 'type': 'binary_operator', 'children': ['63', '66'], 'value': '-'}; {'id': '63', 'type': 'subscript', 'children': ['64', '65']}; {'id': '64', 'type': 'identifier', 'children': [], 'value': 'arr'}; {'id': '65', 'type': 'identifier', 'children': [], 'value': 'idxa'}; {'id': '66', 'type': 'subscript', 'children': ['67', '68']}; {'id': '67', 'type': 'identifier', 'children': [], 'value': 'arr'}; {'id': '68', 'type': 'identifier', 'children': [], 'value': 'idxb'}; {'id': '69', 'type': 'if_statement', 'children': ['70', '73', '91']}; {'id': '70', 'type': 'comparison_operator', 'children': ['71', '72'], 'value': '=='}; {'id': '71', 'type': 'identifier', 'children': [], 'value': 'dist'}; {'id': '72', 'type': 'identifier', 'children': [], 'value': 'min_dist'}; {'id': '73', 'type': 'block', 'children': ['74']}; {'id': '74', 'type': 'if_statement', 'children': ['75', '81']}; {'id': '75', 'type': 'not_operator', 'children': ['76']}; {'id': '76', 'type': 'comparison_operator', 'children': ['77', '80'], 'value': 'in'}; {'id': '77', 'type': 'list', 'children': ['78', '79'], 'value': '[idxb, idxa]'}; {'id': '78', 'type': 'identifier', 'children': [], 'value': 'idxb'}; {'id': '79', 'type': 'identifier', 'children': [], 'value': 'idxa'}; {'id': '80', 'type': 'identifier', 'children': [], 'value': 'outs'}; {'id': '81', 'type': 'block', 'children': ['82']}; {'id': '82', 'type': 'expression_statement', 'children': ['83']}; {'id': '83', 'type': 'call', 'children': ['84', '87']}; {'id': '84', 'type': 'attribute', 'children': ['85', '86']}; {'id': '85', 'type': 'identifier', 'children': [], 'value': 'outs'}; {'id': '86', 'type': 'identifier', 'children': [], 'value': 'append'}; {'id': '87', 'type': 'argument_list', 'children': ['88']}; {'id': '88', 'type': 'list', 'children': ['89', '90'], 'value': '[idxa, idxb]'}; {'id': '89', 'type': 'identifier', 'children': [], 'value': 'idxa'}; {'id': '90', 'type': 'identifier', 'children': [], 'value': 'idxb'}; {'id': '91', 'type': 'elif_clause', 'children': ['92', '95']}; {'id': '92', 'type': 'comparison_operator', 'children': ['93', '94'], 'value': '<'}; {'id': '93', 'type': 'identifier', 'children': [], 'value': 'dist'}; {'id': '94', 'type': 'identifier', 'children': [], 'value': 'min_dist'}; {'id': '95', 'type': 'block', 'children': ['96', '100']}; {'id': '96', 'type': 'expression_statement', 'children': ['97']}; {'id': '97', 'type': 'assignment', 'children': ['98', '99']}; {'id': '98', 'type': 'identifier', 'children': [], 'value': 'min_dist'}; {'id': '99', 'type': 'identifier', 'children': [], 'value': 'dist'}; {'id': '100', 'type': 'expression_statement', 'children': ['101']}; {'id': '101', 'type': 'assignment', 'children': ['102', '103']}; {'id': '102', 'type': 'identifier', 'children': [], 'value': 'outs'}; {'id': '103', 'type': 'list', 'children': ['104'], 'value': '[[idxa, idxb]]'}; {'id': '104', 'type': 'list', 'children': ['105', '106'], 'value': '[idxa, idxb]'}; {'id': '105', 'type': 'identifier', 'children': [], 'value': 'idxa'}; {'id': '106', 'type': 'identifier', 'children': [], 'value': 'idxb'}; {'id': '107', 'type': 'if_statement', 'children': ['108', '111', '114', '121']}; {'id': '108', 'type': 'comparison_operator', 'children': ['109', '110'], 'value': '=='}; {'id': '109', 'type': 'identifier', 'children': [], 'value': 'give'}; {'id': '110', 'type': 'string', 'children': [], 'value': '"indicies"'}; {'id': '111', 'type': 'block', 'children': ['112']}; {'id': '112', 'type': 'return_statement', 'children': ['113']}; {'id': '113', 'type': 'identifier', 'children': [], 'value': 'outs'}; {'id': '114', 'type': 'elif_clause', 'children': ['115', '118']}; {'id': '115', 'type': 'comparison_operator', 'children': ['116', '117'], 'value': '=='}; {'id': '116', 'type': 'identifier', 'children': [], 'value': 'give'}; {'id': '117', 'type': 'string', 'children': [], 'value': '"distance"'}; {'id': '118', 'type': 'block', 'children': ['119']}; {'id': '119', 'type': 'return_statement', 'children': ['120']}; {'id': '120', 'type': 'identifier', 'children': [], 'value': 'min_dist'}; {'id': '121', 'type': 'else_clause', 'children': ['122']}; {'id': '122', 'type': 'block', 'children': ['123']}; {'id': '123', 'type': 'raise_statement', 'children': ['124']}; {'id': '124', 'type': 'call', 'children': ['125', '126']}; {'id': '125', 'type': 'identifier', 'children': [], 'value': 'KeyError'}; {'id': '126', 'type': 'argument_list', 'children': ['127']}; {'id': '127', 'type': 'string', 'children': [], 'value': '"give not recognized in closest_pair"'} | Find the pair of indices corresponding to the closest elements in an array.
If multiple pairs are equally close, both pairs of indicies are returned.
Optionally returns the closest distance itself.
I am sure that this could be written as a cheaper operation. I
wrote this as a quick and dirty method because I need it now to use on some
relatively small arrays. Feel free to refactor if you need this operation
done as fast as possible. - Blaise 2016-02-07
Parameters
----------
arr : numpy.ndarray
The array to search.
give : {'indicies', 'distance'} (optional)
Toggle return behavior. If 'distance', returns a single float - the
closest distance itself. Default is indicies.
Returns
-------
list of lists of two tuples
List containing lists of two tuples: indicies the nearest pair in the
array.
>>> arr = np.array([0, 1, 2, 3, 3, 4, 5, 6, 1])
>>> closest_pair(arr)
[[(1,), (8,)], [(3,), (4,)]] |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'get_app_guid'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'app_name'}; {'id': '6', 'type': 'block', 'children': ['7', '17']}; {'id': '7', 'type': 'expression_statement', 'children': ['8']}; {'id': '8', 'type': 'assignment', 'children': ['9', '10']}; {'id': '9', 'type': 'identifier', 'children': [], 'value': 'summary'}; {'id': '10', 'type': 'call', 'children': ['11', '16']}; {'id': '11', 'type': 'attribute', 'children': ['12', '15']}; {'id': '12', 'type': 'attribute', 'children': ['13', '14']}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'space'}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'get_space_summary'}; {'id': '16', 'type': 'argument_list', 'children': []}; {'id': '17', 'type': 'for_statement', 'children': ['18', '19', '22']}; {'id': '18', 'type': 'identifier', 'children': [], 'value': 'app'}; {'id': '19', 'type': 'subscript', 'children': ['20', '21']}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'summary'}; {'id': '21', 'type': 'string', 'children': [], 'value': "'apps'"}; {'id': '22', 'type': 'block', 'children': ['23']}; {'id': '23', 'type': 'if_statement', 'children': ['24', '29']}; {'id': '24', 'type': 'comparison_operator', 'children': ['25', '28'], 'value': '=='}; {'id': '25', 'type': 'subscript', 'children': ['26', '27']}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'app'}; {'id': '27', 'type': 'string', 'children': [], 'value': "'name'"}; {'id': '28', 'type': 'identifier', 'children': [], 'value': 'app_name'}; {'id': '29', 'type': 'block', 'children': ['30']}; {'id': '30', 'type': 'return_statement', 'children': ['31']}; {'id': '31', 'type': 'subscript', 'children': ['32', '33']}; {'id': '32', 'type': 'identifier', 'children': [], 'value': 'app'}; {'id': '33', 'type': 'string', 'children': [], 'value': "'guid'"} | Returns the GUID for the app instance with
the given name. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '15']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'bcc'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6', '9', '12']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'bcc_emails'}; {'id': '6', 'type': 'default_parameter', 'children': ['7', '8']}; {'id': '7', 'type': 'identifier', 'children': [], 'value': 'global_substitutions'}; {'id': '8', 'type': 'None', 'children': []}; {'id': '9', 'type': 'default_parameter', 'children': ['10', '11']}; {'id': '10', 'type': 'identifier', 'children': [], 'value': 'is_multiple'}; {'id': '11', 'type': 'False', 'children': []}; {'id': '12', 'type': 'default_parameter', 'children': ['13', '14']}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'p'}; {'id': '14', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '15', 'type': 'block', 'children': ['16']}; {'id': '16', 'type': 'if_statement', 'children': ['17', '22', '71']}; {'id': '17', 'type': 'call', 'children': ['18', '19']}; {'id': '18', 'type': 'identifier', 'children': [], 'value': 'isinstance'}; {'id': '19', 'type': 'argument_list', 'children': ['20', '21']}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'bcc_emails'}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'list'}; {'id': '22', 'type': 'block', 'children': ['23']}; {'id': '23', 'type': 'for_statement', 'children': ['24', '25', '26']}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'email'}; {'id': '25', 'type': 'identifier', 'children': [], 'value': 'bcc_emails'}; {'id': '26', 'type': 'block', 'children': ['27', '42', '61']}; {'id': '27', 'type': 'if_statement', 'children': ['28', '33']}; {'id': '28', 'type': 'call', 'children': ['29', '30']}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'isinstance'}; {'id': '30', 'type': 'argument_list', 'children': ['31', '32']}; {'id': '31', 'type': 'identifier', 'children': [], 'value': 'email'}; {'id': '32', 'type': 'identifier', 'children': [], 'value': 'str'}; {'id': '33', 'type': 'block', 'children': ['34']}; {'id': '34', 'type': 'expression_statement', 'children': ['35']}; {'id': '35', 'type': 'assignment', 'children': ['36', '37']}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'email'}; {'id': '37', 'type': 'call', 'children': ['38', '39']}; {'id': '38', 'type': 'identifier', 'children': [], 'value': 'Bcc'}; {'id': '39', 'type': 'argument_list', 'children': ['40', '41']}; {'id': '40', 'type': 'identifier', 'children': [], 'value': 'email'}; {'id': '41', 'type': 'None', 'children': []}; {'id': '42', 'type': 'if_statement', 'children': ['43', '48']}; {'id': '43', 'type': 'call', 'children': ['44', '45']}; {'id': '44', 'type': 'identifier', 'children': [], 'value': 'isinstance'}; {'id': '45', 'type': 'argument_list', 'children': ['46', '47']}; {'id': '46', 'type': 'identifier', 'children': [], 'value': 'email'}; {'id': '47', 'type': 'identifier', 'children': [], 'value': 'tuple'}; {'id': '48', 'type': 'block', 'children': ['49']}; {'id': '49', 'type': 'expression_statement', 'children': ['50']}; {'id': '50', 'type': 'assignment', 'children': ['51', '52']}; {'id': '51', 'type': 'identifier', 'children': [], 'value': 'email'}; {'id': '52', 'type': 'call', 'children': ['53', '54']}; {'id': '53', 'type': 'identifier', 'children': [], 'value': 'Bcc'}; {'id': '54', 'type': 'argument_list', 'children': ['55', '58']}; {'id': '55', 'type': 'subscript', 'children': ['56', '57']}; {'id': '56', 'type': 'identifier', 'children': [], 'value': 'email'}; {'id': '57', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '58', 'type': 'subscript', 'children': ['59', '60']}; {'id': '59', 'type': 'identifier', 'children': [], 'value': 'email'}; {'id': '60', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '61', 'type': 'expression_statement', 'children': ['62']}; {'id': '62', 'type': 'call', 'children': ['63', '66']}; {'id': '63', 'type': 'attribute', 'children': ['64', '65']}; {'id': '64', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '65', 'type': 'identifier', 'children': [], 'value': 'add_bcc'}; {'id': '66', 'type': 'argument_list', 'children': ['67', '68', '69', '70']}; {'id': '67', 'type': 'identifier', 'children': [], 'value': 'email'}; {'id': '68', 'type': 'identifier', 'children': [], 'value': 'global_substitutions'}; {'id': '69', 'type': 'identifier', 'children': [], 'value': 'is_multiple'}; {'id': '70', 'type': 'identifier', 'children': [], 'value': 'p'}; {'id': '71', 'type': 'else_clause', 'children': ['72']}; {'id': '72', 'type': 'block', 'children': ['73', '88', '107']}; {'id': '73', 'type': 'if_statement', 'children': ['74', '79']}; {'id': '74', 'type': 'call', 'children': ['75', '76']}; {'id': '75', 'type': 'identifier', 'children': [], 'value': 'isinstance'}; {'id': '76', 'type': 'argument_list', 'children': ['77', '78']}; {'id': '77', 'type': 'identifier', 'children': [], 'value': 'bcc_emails'}; {'id': '78', 'type': 'identifier', 'children': [], 'value': 'str'}; {'id': '79', 'type': 'block', 'children': ['80']}; {'id': '80', 'type': 'expression_statement', 'children': ['81']}; {'id': '81', 'type': 'assignment', 'children': ['82', '83']}; {'id': '82', 'type': 'identifier', 'children': [], 'value': 'bcc_emails'}; {'id': '83', 'type': 'call', 'children': ['84', '85']}; {'id': '84', 'type': 'identifier', 'children': [], 'value': 'Bcc'}; {'id': '85', 'type': 'argument_list', 'children': ['86', '87']}; {'id': '86', 'type': 'identifier', 'children': [], 'value': 'bcc_emails'}; {'id': '87', 'type': 'None', 'children': []}; {'id': '88', 'type': 'if_statement', 'children': ['89', '94']}; {'id': '89', 'type': 'call', 'children': ['90', '91']}; {'id': '90', 'type': 'identifier', 'children': [], 'value': 'isinstance'}; {'id': '91', 'type': 'argument_list', 'children': ['92', '93']}; {'id': '92', 'type': 'identifier', 'children': [], 'value': 'bcc_emails'}; {'id': '93', 'type': 'identifier', 'children': [], 'value': 'tuple'}; {'id': '94', 'type': 'block', 'children': ['95']}; {'id': '95', 'type': 'expression_statement', 'children': ['96']}; {'id': '96', 'type': 'assignment', 'children': ['97', '98']}; {'id': '97', 'type': 'identifier', 'children': [], 'value': 'bcc_emails'}; {'id': '98', 'type': 'call', 'children': ['99', '100']}; {'id': '99', 'type': 'identifier', 'children': [], 'value': 'Bcc'}; {'id': '100', 'type': 'argument_list', 'children': ['101', '104']}; {'id': '101', 'type': 'subscript', 'children': ['102', '103']}; {'id': '102', 'type': 'identifier', 'children': [], 'value': 'bcc_emails'}; {'id': '103', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '104', 'type': 'subscript', 'children': ['105', '106']}; {'id': '105', 'type': 'identifier', 'children': [], 'value': 'bcc_emails'}; {'id': '106', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '107', 'type': 'expression_statement', 'children': ['108']}; {'id': '108', 'type': 'call', 'children': ['109', '112']}; {'id': '109', 'type': 'attribute', 'children': ['110', '111']}; {'id': '110', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '111', 'type': 'identifier', 'children': [], 'value': 'add_bcc'}; {'id': '112', 'type': 'argument_list', 'children': ['113', '114', '115', '116']}; {'id': '113', 'type': 'identifier', 'children': [], 'value': 'bcc_emails'}; {'id': '114', 'type': 'identifier', 'children': [], 'value': 'global_substitutions'}; {'id': '115', 'type': 'identifier', 'children': [], 'value': 'is_multiple'}; {'id': '116', 'type': 'identifier', 'children': [], 'value': 'p'} | Adds Bcc objects to the Personalization object
:param bcc_emails: An Bcc or list of Bcc objects
:type bcc_emails: Bcc, list(Bcc), tuple
:param global_substitutions: A dict of substitutions for all recipients
:type global_substitutions: dict
:param is_multiple: Create a new personilization for each recipient
:type is_multiple: bool
:param p: p is the Personalization object or Personalization object
index
:type p: Personalization, integer, optional |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'is_python_interpreter'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'filename'}; {'id': '5', 'type': 'block', 'children': ['6', '17']}; {'id': '6', 'type': 'expression_statement', 'children': ['7']}; {'id': '7', 'type': 'assignment', 'children': ['8', '9']}; {'id': '8', 'type': 'identifier', 'children': [], 'value': 'real_filename'}; {'id': '9', 'type': 'call', 'children': ['10', '15']}; {'id': '10', 'type': 'attribute', 'children': ['11', '14']}; {'id': '11', 'type': 'attribute', 'children': ['12', '13']}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'os'}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'path'}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'realpath'}; {'id': '15', 'type': 'argument_list', 'children': ['16']}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'filename'}; {'id': '17', 'type': 'if_statement', 'children': ['18', '32', '35', '103', '113']}; {'id': '18', 'type': '()', 'children': ['19']}; {'id': '19', 'type': 'boolean_operator', 'children': ['20', '27'], 'value': 'or'}; {'id': '20', 'type': 'not_operator', 'children': ['21']}; {'id': '21', 'type': 'call', 'children': ['22', '25']}; {'id': '22', 'type': 'attribute', 'children': ['23', '24']}; {'id': '23', 'type': 'identifier', 'children': [], 'value': 'osp'}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'isfile'}; {'id': '25', 'type': 'argument_list', 'children': ['26']}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'real_filename'}; {'id': '27', 'type': 'not_operator', 'children': ['28']}; {'id': '28', 'type': 'call', 'children': ['29', '30']}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'is_python_interpreter_valid_name'}; {'id': '30', 'type': 'argument_list', 'children': ['31']}; {'id': '31', 'type': 'identifier', 'children': [], 'value': 'filename'}; {'id': '32', 'type': 'block', 'children': ['33']}; {'id': '33', 'type': 'return_statement', 'children': ['34']}; {'id': '34', 'type': 'False', 'children': []}; {'id': '35', 'type': 'elif_clause', 'children': ['36', '40']}; {'id': '36', 'type': 'call', 'children': ['37', '38']}; {'id': '37', 'type': 'identifier', 'children': [], 'value': 'is_pythonw'}; {'id': '38', 'type': 'argument_list', 'children': ['39']}; {'id': '39', 'type': 'identifier', 'children': [], 'value': 'filename'}; {'id': '40', 'type': 'block', 'children': ['41']}; {'id': '41', 'type': 'if_statement', 'children': ['42', '47', '63', '99']}; {'id': '42', 'type': 'comparison_operator', 'children': ['43', '46'], 'value': '=='}; {'id': '43', 'type': 'attribute', 'children': ['44', '45']}; {'id': '44', 'type': 'identifier', 'children': [], 'value': 'os'}; {'id': '45', 'type': 'identifier', 'children': [], 'value': 'name'}; {'id': '46', 'type': 'string', 'children': [], 'value': "'nt'"}; 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{'id': '64', 'type': 'comparison_operator', 'children': ['65', '68'], 'value': '=='}; {'id': '65', 'type': 'attribute', 'children': ['66', '67']}; {'id': '66', 'type': 'identifier', 'children': [], 'value': 'sys'}; {'id': '67', 'type': 'identifier', 'children': [], 'value': 'platform'}; {'id': '68', 'type': 'string', 'children': [], 'value': "'darwin'"}; {'id': '69', 'type': 'block', 'children': ['70']}; {'id': '70', 'type': 'if_statement', 'children': ['71', '81', '84', '95']}; {'id': '71', 'type': 'boolean_operator', 'children': ['72', '75'], 'value': 'and'}; {'id': '72', 'type': 'call', 'children': ['73', '74']}; {'id': '73', 'type': 'identifier', 'children': [], 'value': 'is_anaconda'}; {'id': '74', 'type': 'argument_list', 'children': []}; {'id': '75', 'type': 'call', 'children': ['76', '79']}; {'id': '76', 'type': 'attribute', 'children': ['77', '78']}; {'id': '77', 'type': 'identifier', 'children': [], 'value': 'encoding'}; {'id': '78', 'type': 'identifier', 'children': [], 'value': 'is_text_file'}; {'id': '79', 'type': 'argument_list', 'children': ['80']}; {'id': '80', 'type': 'identifier', 'children': [], 'value': 'real_filename'}; {'id': '81', 'type': 'block', 'children': ['82']}; {'id': '82', 'type': 'return_statement', 'children': ['83']}; {'id': '83', 'type': 'True', 'children': []}; {'id': '84', 'type': 'elif_clause', 'children': ['85', '92']}; {'id': '85', 'type': 'not_operator', 'children': ['86']}; {'id': '86', 'type': 'call', 'children': ['87', '90']}; {'id': '87', 'type': 'attribute', 'children': ['88', '89']}; {'id': '88', 'type': 'identifier', 'children': [], 'value': 'encoding'}; {'id': '89', 'type': 'identifier', 'children': [], 'value': 'is_text_file'}; {'id': '90', 'type': 'argument_list', 'children': ['91']}; {'id': '91', 'type': 'identifier', 'children': [], 'value': 'real_filename'}; {'id': '92', 'type': 'block', 'children': ['93']}; {'id': '93', 'type': 'return_statement', 'children': ['94']}; {'id': '94', 'type': 'True', 'children': []}; {'id': '95', 'type': 'else_clause', 'children': ['96']}; {'id': '96', 'type': 'block', 'children': ['97']}; {'id': '97', 'type': 'return_statement', 'children': ['98']}; {'id': '98', 'type': 'False', 'children': []}; {'id': '99', 'type': 'else_clause', 'children': ['100']}; {'id': '100', 'type': 'block', 'children': ['101']}; {'id': '101', 'type': 'return_statement', 'children': ['102']}; {'id': '102', 'type': 'False', 'children': []}; {'id': '103', 'type': 'elif_clause', 'children': ['104', '110']}; {'id': '104', 'type': 'call', 'children': ['105', '108']}; {'id': '105', 'type': 'attribute', 'children': ['106', '107']}; {'id': '106', 'type': 'identifier', 'children': [], 'value': 'encoding'}; {'id': '107', 'type': 'identifier', 'children': [], 'value': 'is_text_file'}; {'id': '108', 'type': 'argument_list', 'children': ['109']}; {'id': '109', 'type': 'identifier', 'children': [], 'value': 'real_filename'}; {'id': '110', 'type': 'block', 'children': ['111']}; {'id': '111', 'type': 'return_statement', 'children': ['112']}; {'id': '112', 'type': 'False', 'children': []}; {'id': '113', 'type': 'else_clause', 'children': ['114']}; {'id': '114', 'type': 'block', 'children': ['115']}; {'id': '115', 'type': 'return_statement', 'children': ['116']}; {'id': '116', 'type': 'call', 'children': ['117', '118']}; {'id': '117', 'type': 'identifier', 'children': [], 'value': 'check_python_help'}; {'id': '118', 'type': 'argument_list', 'children': ['119']}; {'id': '119', 'type': 'identifier', 'children': [], 'value': 'filename'} | Evaluate wether a file is a python interpreter or not. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '7']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'read_option_value_from_nibble'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'nibble'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'pos'}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'values'}; {'id': '7', 'type': 'block', 'children': ['8']}; {'id': '8', 'type': 'if_statement', 'children': ['9', '12', '17', '52', '97']}; {'id': '9', 'type': 'comparison_operator', 'children': ['10', '11'], 'value': '<='}; {'id': '10', 'type': 'identifier', 'children': [], 'value': 'nibble'}; {'id': '11', 'type': 'integer', 'children': [], 'value': '12'}; {'id': '12', 'type': 'block', 'children': ['13']}; {'id': '13', 'type': 'return_statement', 'children': ['14']}; {'id': '14', 'type': 'expression_list', 'children': ['15', '16']}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'nibble'}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'pos'}; {'id': '17', 'type': 'elif_clause', 'children': ['18', '21']}; {'id': '18', 'type': 'comparison_operator', 'children': ['19', '20'], 'value': '=='}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'nibble'}; {'id': '20', 'type': 'integer', 'children': [], 'value': '13'}; {'id': '21', 'type': 'block', 'children': ['22', '44', '48']}; {'id': '22', 'type': 'expression_statement', 'children': ['23']}; {'id': '23', 'type': 'assignment', 'children': ['24', '25']}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'tmp'}; {'id': '25', 'type': 'binary_operator', 'children': ['26', '43'], 'value': '+'}; {'id': '26', 'type': 'subscript', 'children': ['27', '42']}; {'id': '27', 'type': 'call', 'children': ['28', '31']}; {'id': '28', 'type': 'attribute', 'children': ['29', '30']}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'struct'}; {'id': '30', 'type': 'identifier', 'children': [], 'value': 'unpack'}; {'id': '31', 'type': 'argument_list', 'children': ['32', '33']}; {'id': '32', 'type': 'string', 'children': [], 'value': '"!B"'}; {'id': '33', 'type': 'call', 'children': ['34', '39']}; {'id': '34', 'type': 'attribute', 'children': ['35', '38']}; {'id': '35', 'type': 'subscript', 'children': ['36', '37']}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'values'}; {'id': '37', 'type': 'identifier', 'children': [], 'value': 'pos'}; {'id': '38', 'type': 'identifier', 'children': [], 'value': 'to_bytes'}; {'id': '39', 'type': 'argument_list', 'children': ['40', '41']}; {'id': '40', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '41', 'type': 'string', 'children': [], 'value': '"big"'}; {'id': '42', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '43', 'type': 'integer', 'children': [], 'value': '13'}; {'id': '44', 'type': 'expression_statement', 'children': ['45']}; {'id': '45', 'type': 'augmented_assignment', 'children': ['46', '47'], 'value': '+='}; {'id': '46', 'type': 'identifier', 'children': [], 'value': 'pos'}; {'id': '47', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '48', 'type': 'return_statement', 'children': ['49']}; {'id': '49', 'type': 'expression_list', 'children': ['50', '51']}; {'id': '50', 'type': 'identifier', 'children': [], 'value': 'tmp'}; {'id': '51', 'type': 'identifier', 'children': [], 'value': 'pos'}; {'id': '52', 'type': 'elif_clause', 'children': ['53', '56']}; {'id': '53', 'type': 'comparison_operator', 'children': ['54', '55'], 'value': '=='}; {'id': '54', 'type': 'identifier', 'children': [], 'value': 'nibble'}; {'id': '55', 'type': 'integer', 'children': [], 'value': '14'}; {'id': '56', 'type': 'block', 'children': ['57', '66', '89', '93']}; {'id': '57', 'type': 'expression_statement', 'children': ['58']}; {'id': '58', 'type': 'assignment', 'children': ['59', '60']}; {'id': '59', 'type': 'identifier', 'children': [], 'value': 's'}; {'id': '60', 'type': 'call', 'children': ['61', '64']}; {'id': '61', 'type': 'attribute', 'children': ['62', '63']}; {'id': '62', 'type': 'identifier', 'children': [], 'value': 'struct'}; {'id': '63', 'type': 'identifier', 'children': [], 'value': 'Struct'}; {'id': '64', 'type': 'argument_list', 'children': ['65']}; {'id': '65', 'type': 'string', 'children': [], 'value': '"!H"'}; {'id': '66', 'type': 'expression_statement', 'children': ['67']}; {'id': '67', 'type': 'assignment', 'children': ['68', '69']}; {'id': '68', 'type': 'identifier', 'children': [], 'value': 'tmp'}; {'id': '69', 'type': 'binary_operator', 'children': ['70', '88'], 'value': '+'}; {'id': '70', 'type': 'subscript', 'children': ['71', '87']}; {'id': '71', 'type': 'call', 'children': ['72', '75']}; {'id': '72', 'type': 'attribute', 'children': ['73', '74']}; {'id': '73', 'type': 'identifier', 'children': [], 'value': 's'}; {'id': '74', 'type': 'identifier', 'children': [], 'value': 'unpack_from'}; {'id': '75', 'type': 'argument_list', 'children': ['76']}; {'id': '76', 'type': 'call', 'children': ['77', '84']}; {'id': '77', 'type': 'attribute', 'children': ['78', '83']}; {'id': '78', 'type': 'subscript', 'children': ['79', '80']}; {'id': '79', 'type': 'identifier', 'children': [], 'value': 'values'}; {'id': '80', 'type': 'slice', 'children': ['81', '82']}; {'id': '81', 'type': 'identifier', 'children': [], 'value': 'pos'}; {'id': '82', 'type': 'colon', 'children': []}; {'id': '83', 'type': 'identifier', 'children': [], 'value': 'to_bytes'}; {'id': '84', 'type': 'argument_list', 'children': ['85', '86']}; {'id': '85', 'type': 'integer', 'children': [], 'value': '2'}; {'id': '86', 'type': 'string', 'children': [], 'value': '"big"'}; {'id': '87', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '88', 'type': 'integer', 'children': [], 'value': '269'}; {'id': '89', 'type': 'expression_statement', 'children': ['90']}; {'id': '90', 'type': 'augmented_assignment', 'children': ['91', '92'], 'value': '+='}; {'id': '91', 'type': 'identifier', 'children': [], 'value': 'pos'}; {'id': '92', 'type': 'integer', 'children': [], 'value': '2'}; {'id': '93', 'type': 'return_statement', 'children': ['94']}; {'id': '94', 'type': 'expression_list', 'children': ['95', '96']}; {'id': '95', 'type': 'identifier', 'children': [], 'value': 'tmp'}; {'id': '96', 'type': 'identifier', 'children': [], 'value': 'pos'}; {'id': '97', 'type': 'else_clause', 'children': ['98']}; {'id': '98', 'type': 'block', 'children': ['99']}; {'id': '99', 'type': 'raise_statement', 'children': ['100']}; {'id': '100', 'type': 'call', 'children': ['101', '102']}; {'id': '101', 'type': 'identifier', 'children': [], 'value': 'AttributeError'}; {'id': '102', 'type': 'argument_list', 'children': ['103']}; {'id': '103', 'type': 'binary_operator', 'children': ['104', '105'], 'value': '+'}; {'id': '104', 'type': 'string', 'children': [], 'value': '"Unsupported option nibble "'}; {'id': '105', 'type': 'call', 'children': ['106', '107']}; {'id': '106', 'type': 'identifier', 'children': [], 'value': 'str'}; {'id': '107', 'type': 'argument_list', 'children': ['108']}; {'id': '108', 'type': 'identifier', 'children': [], 'value': 'nibble'} | Calculates the value used in the extended option fields.
:param nibble: the 4-bit option header value.
:return: the value calculated from the nibble and the extended option value. |
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{'id': '46', 'type': 'block', 'children': ['47']}; {'id': '47', 'type': 'expression_statement', 'children': ['48']}; {'id': '48', 'type': 'assignment', 'children': ['49', '50']}; {'id': '49', 'type': 'identifier', 'children': [], 'value': 'property_name'}; {'id': '50', 'type': 'call', 'children': ['51', '54']}; {'id': '51', 'type': 'attribute', 'children': ['52', '53']}; {'id': '52', 'type': 'string', 'children': [], 'value': "'0x{0:04}'"}; {'id': '53', 'type': 'identifier', 'children': [], 'value': 'format'}; {'id': '54', 'type': 'argument_list', 'children': ['55']}; {'id': '55', 'type': 'attribute', 'children': ['56', '57']}; {'id': '56', 'type': 'identifier', 'children': [], 'value': 'property_value'}; {'id': '57', 'type': 'identifier', 'children': [], 'value': 'identifier'}; {'id': '58', 'type': 'expression_statement', 'children': ['59']}; {'id': '59', 'type': 'assignment', 'children': ['60', '61']}; {'id': '60', 'type': 'identifier', 'children': [], 'value': 'value'}; {'id': '61', 'type': 'call', 'children': ['62', '65']}; 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{'id': '92', 'type': 'argument_list', 'children': ['93', '94', '95']}; {'id': '93', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '94', 'type': 'identifier', 'children': [], 'value': 'value_callback_name'}; {'id': '95', 'type': 'None', 'children': []}; {'id': '96', 'type': 'if_statement', 'children': ['97', '98']}; {'id': '97', 'type': 'identifier', 'children': [], 'value': 'value_callback_method'}; {'id': '98', 'type': 'block', 'children': ['99']}; {'id': '99', 'type': 'expression_statement', 'children': ['100']}; {'id': '100', 'type': 'assignment', 'children': ['101', '102']}; {'id': '101', 'type': 'identifier', 'children': [], 'value': 'value'}; {'id': '102', 'type': 'call', 'children': ['103', '104']}; {'id': '103', 'type': 'identifier', 'children': [], 'value': 'value_callback_method'}; {'id': '104', 'type': 'argument_list', 'children': ['105']}; {'id': '105', 'type': 'identifier', 'children': [], 'value': 'value'}; {'id': '106', 'type': 'if_statement', 'children': ['107', '112', '130']}; {'id': '107', 'type': 'comparison_operator', 'children': ['108', '109'], 'value': 'in'}; {'id': '108', 'type': 'identifier', 'children': [], 'value': 'property_name'}; {'id': '109', 'type': 'attribute', 'children': ['110', '111']}; {'id': '110', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '111', 'type': 'identifier', 'children': [], 'value': '_DATE_TIME_PROPERTIES'}; {'id': '112', 'type': 'block', 'children': ['113', '119']}; {'id': '113', 'type': 'expression_statement', 'children': ['114']}; {'id': '114', 'type': 'assignment', 'children': ['115', '116']}; {'id': '115', 'type': 'identifier', 'children': [], 'value': 'properties_dict'}; {'id': '116', 'type': 'attribute', 'children': ['117', '118']}; {'id': '117', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '118', 'type': 'identifier', 'children': [], 'value': 'date_time_properties'}; {'id': '119', 'type': 'expression_statement', 'children': ['120']}; {'id': '120', 'type': 'assignment', 'children': ['121', '122']}; {'id': '121', 'type': 'identifier', 'children': [], 'value': 'value'}; {'id': '122', 'type': 'call', 'children': ['123', '126']}; {'id': '123', 'type': 'attribute', 'children': ['124', '125']}; {'id': '124', 'type': 'identifier', 'children': [], 'value': 'dfdatetime_filetime'}; {'id': '125', 'type': 'identifier', 'children': [], 'value': 'Filetime'}; {'id': '126', 'type': 'argument_list', 'children': ['127']}; {'id': '127', 'type': 'keyword_argument', 'children': ['128', '129']}; {'id': '128', 'type': 'identifier', 'children': [], 'value': 'timestamp'}; {'id': '129', 'type': 'identifier', 'children': [], 'value': 'value'}; {'id': '130', 'type': 'else_clause', 'children': ['131']}; {'id': '131', 'type': 'block', 'children': ['132']}; {'id': '132', 'type': 'expression_statement', 'children': ['133']}; {'id': '133', 'type': 'assignment', 'children': ['134', '135']}; {'id': '134', 'type': 'identifier', 'children': [], 'value': 'properties_dict'}; {'id': '135', 'type': 'attribute', 'children': ['136', '137']}; {'id': '136', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '137', 'type': 'identifier', 'children': [], 'value': '_properties'}; {'id': '138', 'type': 'if_statement', 'children': ['139', '142']}; {'id': '139', 'type': 'comparison_operator', 'children': ['140', '141'], 'value': 'not in'}; {'id': '140', 'type': 'identifier', 'children': [], 'value': 'property_name'}; {'id': '141', 'type': 'identifier', 'children': [], 'value': 'properties_dict'}; {'id': '142', 'type': 'block', 'children': ['143']}; {'id': '143', 'type': 'expression_statement', 'children': ['144']}; {'id': '144', 'type': 'assignment', 'children': ['145', '148']}; {'id': '145', 'type': 'subscript', 'children': ['146', '147']}; {'id': '146', 'type': 'identifier', 'children': [], 'value': 'properties_dict'}; {'id': '147', 'type': 'identifier', 'children': [], 'value': 'property_name'}; {'id': '148', 'type': 'identifier', 'children': [], 'value': 'value'} | Reads properties from a property set.
Args:
property_set (pyolecf.property_set): OLECF property set. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '8']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'login'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'username'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'password'}; {'id': '6', 'type': 'dictionary_splat_pattern', 'children': ['7']}; {'id': '7', 'type': 'identifier', 'children': [], 'value': 'kwargs'}; {'id': '8', 'type': 'block', 'children': ['9', '21', '66', '72', '78', '84']}; {'id': '9', 'type': 'expression_statement', 'children': ['10']}; {'id': '10', 'type': 'assignment', 'children': ['11', '12']}; {'id': '11', 'type': 'identifier', 'children': [], 'value': 'user_id'}; {'id': '12', 'type': 'call', 'children': ['13', '18']}; {'id': '13', 'type': 'attribute', 'children': ['14', '17']}; {'id': '14', 'type': 'attribute', 'children': ['15', '16']}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'util'}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'hdb'}; {'id': '17', 'type': 'identifier', 'children': [], 'value': 'login_user'}; {'id': '18', 'type': 'argument_list', 'children': ['19', '20']}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'username'}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'password'}; {'id': '21', 'type': 'expression_statement', 'children': ['22']}; {'id': '22', 'type': 'assignment', 'children': ['23', '24']}; {'id': '23', 'type': 'identifier', 'children': [], 'value': 'hydra_session'}; {'id': '24', 'type': 'call', 'children': ['25', '28']}; {'id': '25', 'type': 'attribute', 'children': ['26', '27']}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'session'}; {'id': '27', 'type': 'identifier', 'children': [], 'value': 'Session'}; {'id': '28', 'type': 'argument_list', 'children': ['29', '30', '40', '43', '46', '56']}; {'id': '29', 'type': 'dictionary', 'children': []}; {'id': '30', 'type': 'keyword_argument', 'children': ['31', '32']}; {'id': '31', 'type': 'identifier', 'children': [], 'value': 'validate_key'}; {'id': '32', 'type': 'call', 'children': ['33', '36']}; {'id': '33', 'type': 'attribute', 'children': ['34', '35']}; {'id': '34', 'type': 'identifier', 'children': [], 'value': 'config'}; {'id': '35', 'type': 'identifier', 'children': [], 'value': 'get'}; {'id': '36', 'type': 'argument_list', 'children': ['37', '38', '39']}; {'id': '37', 'type': 'string', 'children': [], 'value': "'COOKIES'"}; {'id': '38', 'type': 'string', 'children': [], 'value': "'VALIDATE_KEY'"}; {'id': '39', 'type': 'string', 'children': [], 'value': "'YxaDbzUUSo08b+'"}; {'id': '40', 'type': 'keyword_argument', 'children': ['41', '42']}; {'id': '41', 'type': 'identifier', 'children': [], 'value': 'type'}; {'id': '42', 'type': 'string', 'children': [], 'value': "'file'"}; {'id': '43', 'type': 'keyword_argument', 'children': ['44', '45']}; {'id': '44', 'type': 'identifier', 'children': [], 'value': 'cookie_expires'}; {'id': '45', 'type': 'True', 'children': []}; {'id': '46', 'type': 'keyword_argument', 'children': ['47', '48']}; {'id': '47', 'type': 'identifier', 'children': [], 'value': 'data_dir'}; {'id': '48', 'type': 'call', 'children': ['49', '52']}; {'id': '49', 'type': 'attribute', 'children': ['50', '51']}; {'id': '50', 'type': 'identifier', 'children': [], 'value': 'config'}; {'id': '51', 'type': 'identifier', 'children': [], 'value': 'get'}; {'id': '52', 'type': 'argument_list', 'children': ['53', '54', '55']}; {'id': '53', 'type': 'string', 'children': [], 'value': "'COOKIES'"}; {'id': '54', 'type': 'string', 'children': [], 'value': "'DATA_DIR'"}; {'id': '55', 'type': 'string', 'children': [], 'value': "'/tmp'"}; {'id': '56', 'type': 'keyword_argument', 'children': ['57', '58']}; {'id': '57', 'type': 'identifier', 'children': [], 'value': 'file_dir'}; {'id': '58', 'type': 'call', 'children': ['59', '62']}; {'id': '59', 'type': 'attribute', 'children': ['60', '61']}; {'id': '60', 'type': 'identifier', 'children': [], 'value': 'config'}; {'id': '61', 'type': 'identifier', 'children': [], 'value': 'get'}; {'id': '62', 'type': 'argument_list', 'children': ['63', '64', '65']}; {'id': '63', 'type': 'string', 'children': [], 'value': "'COOKIES'"}; {'id': '64', 'type': 'string', 'children': [], 'value': "'FILE_DIR'"}; {'id': '65', 'type': 'string', 'children': [], 'value': "'/tmp/auth'"}; {'id': '66', 'type': 'expression_statement', 'children': ['67']}; {'id': '67', 'type': 'assignment', 'children': ['68', '71']}; {'id': '68', 'type': 'subscript', 'children': ['69', '70']}; {'id': '69', 'type': 'identifier', 'children': [], 'value': 'hydra_session'}; {'id': '70', 'type': 'string', 'children': [], 'value': "'user_id'"}; {'id': '71', 'type': 'identifier', 'children': [], 'value': 'user_id'}; {'id': '72', 'type': 'expression_statement', 'children': ['73']}; {'id': '73', 'type': 'assignment', 'children': ['74', '77']}; {'id': '74', 'type': 'subscript', 'children': ['75', '76']}; {'id': '75', 'type': 'identifier', 'children': [], 'value': 'hydra_session'}; {'id': '76', 'type': 'string', 'children': [], 'value': "'username'"}; {'id': '77', 'type': 'identifier', 'children': [], 'value': 'username'}; {'id': '78', 'type': 'expression_statement', 'children': ['79']}; {'id': '79', 'type': 'call', 'children': ['80', '83']}; {'id': '80', 'type': 'attribute', 'children': ['81', '82']}; {'id': '81', 'type': 'identifier', 'children': [], 'value': 'hydra_session'}; {'id': '82', 'type': 'identifier', 'children': [], 'value': 'save'}; {'id': '83', 'type': 'argument_list', 'children': []}; {'id': '84', 'type': 'return_statement', 'children': ['85']}; {'id': '85', 'type': 'tuple', 'children': ['86', '87']}; {'id': '86', 'type': 'identifier', 'children': [], 'value': 'user_id'}; {'id': '87', 'type': 'attribute', 'children': ['88', '89']}; {'id': '88', 'type': 'identifier', 'children': [], 'value': 'hydra_session'}; {'id': '89', 'type': 'identifier', 'children': [], 'value': 'id'} | Login a user, returning a dict containing their user_id and session_id
This does the DB login to check the credentials, and then creates a session
so that requests from apps do not need to perform a login
args:
username (string): The user's username
password(string): The user's password (unencrypted)
returns:
A dict containing the user_id and session_id
raises:
HydraError if the login fails |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '8']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'count'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'data'}; {'id': '5', 'type': 'default_parameter', 'children': ['6', '7']}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'axis'}; {'id': '7', 'type': 'None', 'children': []}; {'id': '8', 'type': 'block', 'children': ['9']}; {'id': '9', 'type': 'return_statement', 'children': ['10']}; {'id': '10', 'type': 'call', 'children': ['11', '14']}; {'id': '11', 'type': 'attribute', 'children': ['12', '13']}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'np'}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'sum'}; {'id': '14', 'type': 'argument_list', 'children': ['15', '24']}; {'id': '15', 'type': 'call', 'children': ['16', '19']}; {'id': '16', 'type': 'attribute', 'children': ['17', '18']}; {'id': '17', 'type': 'identifier', 'children': [], 'value': 'np'}; {'id': '18', 'type': 'identifier', 'children': [], 'value': 'logical_not'}; {'id': '19', 'type': 'argument_list', 'children': ['20']}; {'id': '20', 'type': 'call', 'children': ['21', '22']}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'isnull'}; {'id': '22', 'type': 'argument_list', 'children': ['23']}; {'id': '23', 'type': 'identifier', 'children': [], 'value': 'data'}; {'id': '24', 'type': 'keyword_argument', 'children': ['25', '26']}; {'id': '25', 'type': 'identifier', 'children': [], 'value': 'axis'}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'axis'} | Count the number of non-NA in this array along the given axis or axes |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'get_el'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'el'}; {'id': '5', 'type': 'block', 'children': ['6', '18']}; {'id': '6', 'type': 'expression_statement', 'children': ['7']}; {'id': '7', 'type': 'assignment', 'children': ['8', '9']}; {'id': '8', 'type': 'identifier', 'children': [], 'value': 'tag_name'}; {'id': '9', 'type': 'call', 'children': ['10', '17']}; {'id': '10', 'type': 'attribute', 'children': ['11', '16']}; {'id': '11', 'type': 'attribute', 'children': ['12', '15']}; {'id': '12', 'type': 'attribute', 'children': ['13', '14']}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'el'}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'elt'}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'tagName'}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'lower'}; {'id': '17', 'type': 'argument_list', 'children': []}; {'id': '18', 'type': 'if_statement', 'children': ['19', '25', '30']}; {'id': '19', 'type': 'comparison_operator', 'children': ['20', '21'], 'value': 'in'}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'tag_name'}; {'id': '21', 'type': 'set', 'children': ['22', '23', '24']}; {'id': '22', 'type': 'string', 'children': [], 'value': '"input"'}; {'id': '23', 'type': 'string', 'children': [], 'value': '"textarea"'}; {'id': '24', 'type': 'string', 'children': [], 'value': '"select"'}; {'id': '25', 'type': 'block', 'children': ['26']}; {'id': '26', 'type': 'return_statement', 'children': ['27']}; {'id': '27', 'type': 'attribute', 'children': ['28', '29']}; {'id': '28', 'type': 'identifier', 'children': [], 'value': 'el'}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'value'}; {'id': '30', 'type': 'else_clause', 'children': ['31']}; {'id': '31', 'type': 'block', 'children': ['32']}; {'id': '32', 'type': 'raise_statement', 'children': ['33']}; {'id': '33', 'type': 'call', 'children': ['34', '35']}; {'id': '34', 'type': 'identifier', 'children': [], 'value': 'ValueError'}; {'id': '35', 'type': 'argument_list', 'children': ['36']}; {'id': '36', 'type': 'binary_operator', 'children': ['37', '38'], 'value': '%'}; {'id': '37', 'type': 'string', 'children': [], 'value': '"Getter for %s (%s) not implemented!"'}; {'id': '38', 'type': 'tuple', 'children': ['39', '40']}; {'id': '39', 'type': 'identifier', 'children': [], 'value': 'tag_name'}; {'id': '40', 'type': 'attribute', 'children': ['41', '42']}; {'id': '41', 'type': 'identifier', 'children': [], 'value': 'el'}; {'id': '42', 'type': 'identifier', 'children': [], 'value': 'id'} | Get value of given `el` tag element.
Automatically choose proper method to set the `value` based on the type
of the `el`.
Args:
el (obj): Element reference to the input you want to convert to
typeahead.
Returns:
str: Value of the object. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '7']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'dK_dr_via_X'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'X'}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'X2'}; {'id': '7', 'type': 'block', 'children': ['8']}; {'id': '8', 'type': 'return_statement', 'children': ['9']}; {'id': '9', 'type': 'call', 'children': ['10', '13']}; {'id': '10', 'type': 'attribute', 'children': ['11', '12']}; {'id': '11', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'dK_dr'}; {'id': '13', 'type': 'argument_list', 'children': ['14']}; {'id': '14', 'type': 'call', 'children': ['15', '18']}; {'id': '15', 'type': 'attribute', 'children': ['16', '17']}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '17', 'type': 'identifier', 'children': [], 'value': '_scaled_dist'}; {'id': '18', 'type': 'argument_list', 'children': ['19', '20']}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'X'}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'X2'} | compute the derivative of K wrt X going through X |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '14']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'plot'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '8', '11']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'default_parameter', 'children': ['6', '7']}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'title'}; {'id': '7', 'type': 'identifier', 'children': [], 'value': 'LABEL_DEFAULT'}; {'id': '8', 'type': 'default_parameter', 'children': ['9', '10']}; {'id': '9', 'type': 'identifier', 'children': [], 'value': 'xlabel'}; {'id': '10', 'type': 'identifier', 'children': [], 'value': 'LABEL_DEFAULT'}; {'id': '11', 'type': 'default_parameter', 'children': ['12', '13']}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'ylabel'}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'LABEL_DEFAULT'}; {'id': '14', 'type': 'block', 'children': ['15', '24', '33', '42', '51', '60', '69']}; {'id': '15', 'type': 'if_statement', 'children': ['16', '19']}; {'id': '16', 'type': 'comparison_operator', 'children': ['17', '18'], 'value': '=='}; {'id': '17', 'type': 'identifier', 'children': [], 'value': 'title'}; {'id': '18', 'type': 'string', 'children': [], 'value': '""'}; {'id': '19', 'type': 'block', 'children': ['20']}; {'id': '20', 'type': 'expression_statement', 'children': ['21']}; {'id': '21', 'type': 'assignment', 'children': ['22', '23']}; {'id': '22', 'type': 'identifier', 'children': [], 'value': 'title'}; {'id': '23', 'type': 'string', 'children': [], 'value': '" "'}; {'id': '24', 'type': 'if_statement', 'children': ['25', '28']}; {'id': '25', 'type': 'comparison_operator', 'children': ['26', '27'], 'value': '=='}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'xlabel'}; {'id': '27', 'type': 'string', 'children': [], 'value': '""'}; {'id': '28', 'type': 'block', 'children': ['29']}; {'id': '29', 'type': 'expression_statement', 'children': ['30']}; {'id': '30', 'type': 'assignment', 'children': ['31', '32']}; {'id': '31', 'type': 'identifier', 'children': [], 'value': 'xlabel'}; {'id': '32', 'type': 'string', 'children': [], 'value': '" "'}; {'id': '33', 'type': 'if_statement', 'children': ['34', '37']}; {'id': '34', 'type': 'comparison_operator', 'children': ['35', '36'], 'value': '=='}; {'id': '35', 'type': 'identifier', 'children': [], 'value': 'ylabel'}; {'id': '36', 'type': 'string', 'children': [], 'value': '""'}; {'id': '37', 'type': 'block', 'children': ['38']}; {'id': '38', 'type': 'expression_statement', 'children': ['39']}; {'id': '39', 'type': 'assignment', 'children': ['40', '41']}; {'id': '40', 'type': 'identifier', 'children': [], 'value': 'ylabel'}; {'id': '41', 'type': 'string', 'children': [], 'value': '" "'}; {'id': '42', 'type': 'if_statement', 'children': ['43', '46']}; {'id': '43', 'type': 'comparison_operator', 'children': ['44', '45'], 'value': 'is'}; {'id': '44', 'type': 'identifier', 'children': [], 'value': 'title'}; {'id': '45', 'type': 'None', 'children': []}; {'id': '46', 'type': 'block', 'children': ['47']}; {'id': '47', 'type': 'expression_statement', 'children': ['48']}; {'id': '48', 'type': 'assignment', 'children': ['49', '50']}; {'id': '49', 'type': 'identifier', 'children': [], 'value': 'title'}; {'id': '50', 'type': 'string', 'children': [], 'value': '""'}; {'id': '51', 'type': 'if_statement', 'children': ['52', '55']}; {'id': '52', 'type': 'comparison_operator', 'children': ['53', '54'], 'value': 'is'}; {'id': '53', 'type': 'identifier', 'children': [], 'value': 'xlabel'}; {'id': '54', 'type': 'None', 'children': []}; {'id': '55', 'type': 'block', 'children': ['56']}; {'id': '56', 'type': 'expression_statement', 'children': ['57']}; {'id': '57', 'type': 'assignment', 'children': ['58', '59']}; {'id': '58', 'type': 'identifier', 'children': [], 'value': 'xlabel'}; {'id': '59', 'type': 'string', 'children': [], 'value': '""'}; {'id': '60', 'type': 'if_statement', 'children': ['61', '64']}; {'id': '61', 'type': 'comparison_operator', 'children': ['62', '63'], 'value': 'is'}; {'id': '62', 'type': 'identifier', 'children': [], 'value': 'ylabel'}; {'id': '63', 'type': 'None', 'children': []}; {'id': '64', 'type': 'block', 'children': ['65']}; {'id': '65', 'type': 'expression_statement', 'children': ['66']}; {'id': '66', 'type': 'assignment', 'children': ['67', '68']}; {'id': '67', 'type': 'identifier', 'children': [], 'value': 'ylabel'}; {'id': '68', 'type': 'string', 'children': [], 'value': '""'}; {'id': '69', 'type': 'return_statement', 'children': ['70']}; {'id': '70', 'type': 'call', 'children': ['71', '72']}; {'id': '71', 'type': 'identifier', 'children': [], 'value': 'Plot'}; {'id': '72', 'type': 'argument_list', 'children': ['73']}; {'id': '73', 'type': 'call', 'children': ['74', '79']}; {'id': '74', 'type': 'attribute', 'children': ['75', '78']}; {'id': '75', 'type': 'attribute', 'children': ['76', '77']}; {'id': '76', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '77', 'type': 'identifier', 'children': [], 'value': '__proxy__'}; {'id': '78', 'type': 'identifier', 'children': [], 'value': 'plot'}; {'id': '79', 'type': 'argument_list', 'children': ['80', '81', '82']}; {'id': '80', 'type': 'identifier', 'children': [], 'value': 'title'}; {'id': '81', 'type': 'identifier', 'children': [], 'value': 'xlabel'}; {'id': '82', 'type': 'identifier', 'children': [], 'value': 'ylabel'} | Create a Plot object representing the SArray.
Notes
-----
- The plot will render either inline in a Jupyter Notebook, or in a
native GUI window, depending on the value provided in
`turicreate.visualization.set_target` (defaults to 'auto').
Parameters
----------
title : str
The plot title to show for the resulting visualization.
If the title is None, the title will be omitted.
xlabel : str
The X axis label to show for the resulting visualization.
If the xlabel is None, the X axis label will be omitted.
ylabel : str
The Y axis label to show for the resulting visualization.
If the ylabel is None, the Y axis label will be omitted.
Returns
-------
out : Plot
A :class: Plot object that is the visualization of the SArray.
Examples
--------
Suppose 'sa' is an SArray, we can create a plot of it using:
>>> plt = sa.plot()
To override the default plot title and axis labels:
>>> plt = sa.plot(title="My Plot Title", xlabel="My X Axis", ylabel="My Y Axis")
We can then visualize the plot using:
>>> plt.show() |
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{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '8']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'where'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'cmd'}; {'id': '5', 'type': 'default_parameter', 'children': ['6', '7']}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'path'}; {'id': '7', 'type': 'None', 'children': []}; {'id': '8', 'type': 'block', 'children': ['9', '22']}; {'id': '9', 'type': 'expression_statement', 'children': ['10']}; {'id': '10', 'type': 'assignment', 'children': ['11', '12']}; {'id': '11', 'type': 'identifier', 'children': [], 'value': 'raw_result'}; {'id': '12', 'type': 'call', 'children': ['13', '16']}; {'id': '13', 'type': 'attribute', 'children': ['14', '15']}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'shutil'}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'which'}; {'id': '16', 'type': 'argument_list', 'children': ['17', '18', '21']}; {'id': '17', 'type': 'identifier', 'children': [], 'value': 'cmd'}; {'id': '18', 'type': 'attribute', 'children': ['19', '20']}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'os'}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'X_OK'}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'path'}; {'id': '22', 'type': 'if_statement', 'children': ['23', '24', '34']}; {'id': '23', 'type': 'identifier', 'children': [], 'value': 'raw_result'}; {'id': '24', 'type': 'block', 'children': ['25']}; {'id': '25', 'type': 'return_statement', 'children': ['26']}; {'id': '26', 'type': 'call', 'children': ['27', '32']}; {'id': '27', 'type': 'attribute', 'children': ['28', '31']}; {'id': '28', 'type': 'attribute', 'children': ['29', '30']}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'os'}; {'id': '30', 'type': 'identifier', 'children': [], 'value': 'path'}; {'id': '31', 'type': 'identifier', 'children': [], 'value': 'abspath'}; {'id': '32', 'type': 'argument_list', 'children': ['33']}; {'id': '33', 'type': 'identifier', 'children': [], 'value': 'raw_result'}; {'id': '34', 'type': 'else_clause', 'children': ['35']}; {'id': '35', 'type': 'block', 'children': ['36']}; {'id': '36', 'type': 'raise_statement', 'children': ['37']}; {'id': '37', 'type': 'call', 'children': ['38', '39']}; {'id': '38', 'type': 'identifier', 'children': [], 'value': 'ValueError'}; {'id': '39', 'type': 'argument_list', 'children': ['40']}; {'id': '40', 'type': 'call', 'children': ['41', '44']}; {'id': '41', 'type': 'attribute', 'children': ['42', '43']}; {'id': '42', 'type': 'string', 'children': [], 'value': '"Could not find \'{}\' in the path"'}; {'id': '43', 'type': 'identifier', 'children': [], 'value': 'format'}; {'id': '44', 'type': 'argument_list', 'children': ['45']}; {'id': '45', 'type': 'identifier', 'children': [], 'value': 'cmd'} | A function to wrap shutil.which for universal usage |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '8']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'mean_curve'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'values'}; {'id': '5', 'type': 'default_parameter', 'children': ['6', '7']}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'weights'}; {'id': '7', 'type': 'None', 'children': []}; {'id': '8', 'type': 'block', 'children': ['9', '29', '48']}; {'id': '9', 'type': 'if_statement', 'children': ['10', '13']}; {'id': '10', 'type': 'comparison_operator', 'children': ['11', '12'], 'value': 'is'}; {'id': '11', 'type': 'identifier', 'children': [], 'value': 'weights'}; {'id': '12', 'type': 'None', 'children': []}; {'id': '13', 'type': 'block', 'children': ['14']}; {'id': '14', 'type': 'expression_statement', 'children': ['15']}; {'id': '15', 'type': 'assignment', 'children': ['16', '17']}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'weights'}; {'id': '17', 'type': 'binary_operator', 'children': ['18', '25'], 'value': '*'}; {'id': '18', 'type': 'list', 'children': ['19'], 'value': '[1. / len(values)]'}; {'id': '19', 'type': 'binary_operator', 'children': ['20', '21'], 'value': '/'}; {'id': '20', 'type': 'float', 'children': [], 'value': '1.'}; {'id': '21', 'type': 'call', 'children': ['22', '23']}; {'id': '22', 'type': 'identifier', 'children': [], 'value': 'len'}; {'id': '23', 'type': 'argument_list', 'children': ['24']}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'values'}; {'id': '25', 'type': 'call', 'children': ['26', '27']}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'len'}; {'id': '27', 'type': 'argument_list', 'children': ['28']}; {'id': '28', 'type': 'identifier', 'children': [], 'value': 'values'}; {'id': '29', 'type': 'if_statement', 'children': ['30', '38']}; {'id': '30', 'type': 'not_operator', 'children': ['31']}; {'id': '31', 'type': 'call', 'children': ['32', '33']}; {'id': '32', 'type': 'identifier', 'children': [], 'value': 'isinstance'}; {'id': '33', 'type': 'argument_list', 'children': ['34', '35']}; {'id': '34', 'type': 'identifier', 'children': [], 'value': 'values'}; {'id': '35', 'type': 'attribute', 'children': ['36', '37']}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'numpy'}; {'id': '37', 'type': 'identifier', 'children': [], 'value': 'ndarray'}; {'id': '38', 'type': 'block', 'children': ['39']}; {'id': '39', 'type': 'expression_statement', 'children': ['40']}; {'id': '40', 'type': 'assignment', 'children': ['41', '42']}; {'id': '41', 'type': 'identifier', 'children': [], 'value': 'values'}; {'id': '42', 'type': 'call', 'children': ['43', '46']}; {'id': '43', 'type': 'attribute', 'children': ['44', '45']}; {'id': '44', 'type': 'identifier', 'children': [], 'value': 'numpy'}; {'id': '45', 'type': 'identifier', 'children': [], 'value': 'array'}; {'id': '46', 'type': 'argument_list', 'children': ['47']}; {'id': '47', 'type': 'identifier', 'children': [], 'value': 'values'}; {'id': '48', 'type': 'return_statement', 'children': ['49']}; {'id': '49', 'type': 'call', 'children': ['50', '53']}; {'id': '50', 'type': 'attribute', 'children': ['51', '52']}; {'id': '51', 'type': 'identifier', 'children': [], 'value': 'numpy'}; {'id': '52', 'type': 'identifier', 'children': [], 'value': 'average'}; {'id': '53', 'type': 'argument_list', 'children': ['54', '55', '58']}; {'id': '54', 'type': 'identifier', 'children': [], 'value': 'values'}; {'id': '55', 'type': 'keyword_argument', 'children': ['56', '57']}; {'id': '56', 'type': 'identifier', 'children': [], 'value': 'axis'}; {'id': '57', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '58', 'type': 'keyword_argument', 'children': ['59', '60']}; {'id': '59', 'type': 'identifier', 'children': [], 'value': 'weights'}; {'id': '60', 'type': 'identifier', 'children': [], 'value': 'weights'} | Compute the mean by using numpy.average on the first axis. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'urlsafe_b64decode'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'data'}; {'id': '5', 'type': 'block', 'children': ['6', '21']}; {'id': '6', 'type': 'expression_statement', 'children': ['7']}; {'id': '7', 'type': 'assignment', 'children': ['8', '9']}; {'id': '8', 'type': 'identifier', 'children': [], 'value': 'pad'}; {'id': '9', 'type': 'binary_operator', 'children': ['10', '11'], 'value': '*'}; {'id': '10', 'type': 'string', 'children': [], 'value': "b'='"}; {'id': '11', 'type': '()', 'children': ['12']}; {'id': '12', 'type': 'binary_operator', 'children': ['13', '14'], 'value': '-'}; {'id': '13', 'type': 'integer', 'children': [], 'value': '4'}; {'id': '14', 'type': '()', 'children': ['15']}; {'id': '15', 'type': 'binary_operator', 'children': ['16', '20'], 'value': '&'}; {'id': '16', 'type': 'call', 'children': ['17', '18']}; {'id': '17', 'type': 'identifier', 'children': [], 'value': 'len'}; {'id': '18', 'type': 'argument_list', 'children': ['19']}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'data'}; {'id': '20', 'type': 'integer', 'children': [], 'value': '3'}; {'id': '21', 'type': 'return_statement', 'children': ['22']}; {'id': '22', 'type': 'call', 'children': ['23', '26']}; {'id': '23', 'type': 'attribute', 'children': ['24', '25']}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'base64'}; {'id': '25', 'type': 'identifier', 'children': [], 'value': 'urlsafe_b64decode'}; {'id': '26', 'type': 'argument_list', 'children': ['27']}; {'id': '27', 'type': 'binary_operator', 'children': ['28', '29'], 'value': '+'}; {'id': '28', 'type': 'identifier', 'children': [], 'value': 'data'}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'pad'} | urlsafe_b64decode without padding |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'calculate_descriptors'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'mol'}; {'id': '6', 'type': 'block', 'children': ['7', '37', '46', '53', '62', '132']}; {'id': '7', 'type': 'expression_statement', 'children': ['8']}; {'id': '8', 'type': 'assignment', 'children': ['9', '12']}; {'id': '9', 'type': 'attribute', 'children': ['10', '11']}; {'id': '10', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '11', 'type': 'identifier', 'children': [], 'value': 'ligand_atoms'}; {'id': '12', 'type': 'dictionary_comprehension', 'children': ['13', '21']}; {'id': '13', 'type': 'pair', 'children': ['14', '15']}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'index'}; {'id': '15', 'type': 'dictionary', 'children': ['16']}; {'id': '16', 'type': 'pair', 'children': ['17', '18']}; {'id': '17', 'type': 'string', 'children': [], 'value': '"name"'}; {'id': '18', 'type': 'attribute', 'children': ['19', '20']}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'x'}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'name'}; {'id': '21', 'type': 'for_in_clause', 'children': ['22', '25']}; {'id': '22', 'type': 'pattern_list', 'children': ['23', '24']}; {'id': '23', 'type': 'identifier', 'children': [], 'value': 'index'}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'x'}; {'id': '25', 'type': 'call', 'children': ['26', '27']}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'enumerate'}; {'id': '27', 'type': 'argument_list', 'children': ['28']}; {'id': '28', 'type': 'attribute', 'children': ['29', '36']}; {'id': '29', 'type': 'attribute', 'children': ['30', '35']}; {'id': '30', 'type': 'attribute', 'children': ['31', '34']}; {'id': '31', 'type': 'attribute', 'children': ['32', '33']}; {'id': '32', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '33', 'type': 'identifier', 'children': [], 'value': 'topology_data'}; {'id': '34', 'type': 'identifier', 'children': [], 'value': 'universe'}; {'id': '35', 'type': 'identifier', 'children': [], 'value': 'ligand_noH'}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'atoms'}; {'id': '37', 'type': 'expression_statement', 'children': ['38']}; {'id': '38', 'type': 'assignment', 'children': ['39', '40']}; {'id': '39', 'type': 'identifier', 'children': [], 'value': 'contribs'}; {'id': '40', 'type': 'call', 'children': ['41', '44']}; {'id': '41', 'type': 'attribute', 'children': ['42', '43']}; {'id': '42', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '43', 'type': 'identifier', 'children': [], 'value': 'calculate_logP'}; {'id': '44', 'type': 'argument_list', 'children': ['45']}; {'id': '45', 'type': 'identifier', 'children': [], 'value': 'mol'}; {'id': '46', 'type': 'expression_statement', 'children': ['47']}; {'id': '47', 'type': 'call', 'children': ['48', '51']}; {'id': '48', 'type': 'attribute', 'children': ['49', '50']}; {'id': '49', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '50', 'type': 'identifier', 'children': [], 'value': 'calculate_Gasteiger_charges'}; {'id': '51', 'type': 'argument_list', 'children': ['52']}; {'id': '52', 'type': 'identifier', 'children': [], 'value': 'mol'}; {'id': '53', 'type': 'expression_statement', 'children': ['54']}; {'id': '54', 'type': 'assignment', 'children': ['55', '56']}; {'id': '55', 'type': 'identifier', 'children': [], 'value': 'fcharges'}; {'id': '56', 'type': 'call', 'children': ['57', '60']}; {'id': '57', 'type': 'attribute', 'children': ['58', '59']}; {'id': '58', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '59', 'type': 'identifier', 'children': [], 'value': 'calculate_formal_charge'}; {'id': '60', 'type': 'argument_list', 'children': ['61']}; {'id': '61', 'type': 'identifier', 'children': [], 'value': 'mol'}; {'id': '62', 'type': 'for_statement', 'children': ['63', '64', '71']}; {'id': '63', 'type': 'identifier', 'children': [], 'value': 'atom'}; {'id': '64', 'type': 'call', 'children': ['65', '70']}; {'id': '65', 'type': 'attribute', 'children': ['66', '69']}; {'id': '66', 'type': 'attribute', 'children': ['67', '68']}; {'id': '67', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '68', 'type': 'identifier', 'children': [], 'value': 'ligand_atoms'}; {'id': '69', 'type': 'identifier', 'children': [], 'value': 'keys'}; {'id': '70', 'type': 'argument_list', 'children': []}; {'id': '71', 'type': 'block', 'children': ['72', '86', '100', '120']}; {'id': '72', 'type': 'expression_statement', 'children': ['73']}; {'id': '73', 'type': 'assignment', 'children': ['74', '81']}; {'id': '74', 'type': 'subscript', 'children': ['75', '80']}; {'id': '75', 'type': 'subscript', 'children': ['76', '79']}; {'id': '76', 'type': 'attribute', 'children': ['77', '78']}; {'id': '77', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '78', 'type': 'identifier', 'children': [], 'value': 'ligand_atoms'}; {'id': '79', 'type': 'identifier', 'children': [], 'value': 'atom'}; {'id': '80', 'type': 'string', 'children': [], 'value': '"logP"'}; {'id': '81', 'type': 'subscript', 'children': ['82', '85']}; {'id': '82', 'type': 'subscript', 'children': ['83', '84']}; {'id': '83', 'type': 'identifier', 'children': [], 'value': 'contribs'}; {'id': '84', 'type': 'identifier', 'children': [], 'value': 'atom'}; {'id': '85', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '86', 'type': 'expression_statement', 'children': ['87']}; {'id': '87', 'type': 'assignment', 'children': ['88', '95']}; {'id': '88', 'type': 'subscript', 'children': ['89', '94']}; {'id': '89', 'type': 'subscript', 'children': ['90', '93']}; {'id': '90', 'type': 'attribute', 'children': ['91', '92']}; {'id': '91', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '92', 'type': 'identifier', 'children': [], 'value': 'ligand_atoms'}; {'id': '93', 'type': 'identifier', 'children': [], 'value': 'atom'}; {'id': '94', 'type': 'string', 'children': [], 'value': '"MR"'}; {'id': '95', 'type': 'subscript', 'children': ['96', '99']}; {'id': '96', 'type': 'subscript', 'children': ['97', '98']}; {'id': '97', 'type': 'identifier', 'children': [], 'value': 'contribs'}; {'id': '98', 'type': 'identifier', 'children': [], 'value': 'atom'}; {'id': '99', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '100', 'type': 'expression_statement', 'children': ['101']}; {'id': '101', 'type': 'assignment', 'children': ['102', '109']}; {'id': '102', 'type': 'subscript', 'children': ['103', '108']}; {'id': '103', 'type': 'subscript', 'children': ['104', '107']}; {'id': '104', 'type': 'attribute', 'children': ['105', '106']}; {'id': '105', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '106', 'type': 'identifier', 'children': [], 'value': 'ligand_atoms'}; {'id': '107', 'type': 'identifier', 'children': [], 'value': 'atom'}; {'id': '108', 'type': 'string', 'children': [], 'value': '"Gasteiger_ch"'}; {'id': '109', 'type': 'call', 'children': ['110', '118']}; {'id': '110', 'type': 'attribute', 'children': ['111', '117']}; {'id': '111', 'type': 'call', 'children': ['112', '115']}; {'id': '112', 'type': 'attribute', 'children': ['113', '114']}; {'id': '113', 'type': 'identifier', 'children': [], 'value': 'mol'}; {'id': '114', 'type': 'identifier', 'children': [], 'value': 'GetAtomWithIdx'}; {'id': '115', 'type': 'argument_list', 'children': ['116']}; {'id': '116', 'type': 'identifier', 'children': [], 'value': 'atom'}; {'id': '117', 'type': 'identifier', 'children': [], 'value': 'GetProp'}; {'id': '118', 'type': 'argument_list', 'children': ['119']}; {'id': '119', 'type': 'string', 'children': [], 'value': '"_GasteigerCharge"'}; {'id': '120', 'type': 'expression_statement', 'children': ['121']}; {'id': '121', 'type': 'assignment', 'children': ['122', '129']}; {'id': '122', 'type': 'subscript', 'children': ['123', '128']}; {'id': '123', 'type': 'subscript', 'children': ['124', '127']}; {'id': '124', 'type': 'attribute', 'children': ['125', '126']}; {'id': '125', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '126', 'type': 'identifier', 'children': [], 'value': 'ligand_atoms'}; {'id': '127', 'type': 'identifier', 'children': [], 'value': 'atom'}; {'id': '128', 'type': 'string', 'children': [], 'value': '"Formal charges"'}; {'id': '129', 'type': 'subscript', 'children': ['130', '131']}; {'id': '130', 'type': 'identifier', 'children': [], 'value': 'fcharges'}; {'id': '131', 'type': 'identifier', 'children': [], 'value': 'atom'}; {'id': '132', 'type': 'expression_statement', 'children': ['133']}; {'id': '133', 'type': 'assignment', 'children': ['134', '137']}; {'id': '134', 'type': 'attribute', 'children': ['135', '136']}; {'id': '135', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '136', 'type': 'identifier', 'children': [], 'value': 'rot_bonds'}; {'id': '137', 'type': 'call', 'children': ['138', '141']}; {'id': '138', 'type': 'attribute', 'children': ['139', '140']}; {'id': '139', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '140', 'type': 'identifier', 'children': [], 'value': 'get_rotatable_bonds'}; {'id': '141', 'type': 'argument_list', 'children': ['142']}; {'id': '142', 'type': 'identifier', 'children': [], 'value': 'mol'} | Calculates descriptors such as logP, charges and MR and saves that in a dictionary. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '7']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_writeFeatures'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'i'}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'image'}; {'id': '7', 'type': 'block', 'children': ['8', '14', '24', '32', '59']}; {'id': '8', 'type': 'expression_statement', 'children': ['9']}; {'id': '9', 'type': 'assignment', 'children': ['10', '11']}; {'id': '10', 'type': 'identifier', 'children': [], 'value': 'basename'}; {'id': '11', 'type': 'binary_operator', 'children': ['12', '13'], 'value': '%'}; {'id': '12', 'type': 'string', 'children': [], 'value': "'features-%d.txt'"}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'i'}; {'id': '14', 'type': 'expression_statement', 'children': ['15']}; {'id': '15', 'type': 'assignment', 'children': ['16', '17']}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'filename'}; {'id': '17', 'type': 'binary_operator', 'children': ['18', '19'], 'value': '%'}; {'id': '18', 'type': 'string', 'children': [], 'value': "'%s/%s'"}; {'id': '19', 'type': 'tuple', 'children': ['20', '23']}; {'id': '20', 'type': 'attribute', 'children': ['21', '22']}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '22', 'type': 'identifier', 'children': [], 'value': '_outputDir'}; {'id': '23', 'type': 'identifier', 'children': [], 'value': 'basename'}; {'id': '24', 'type': 'expression_statement', 'children': ['25']}; {'id': '25', 'type': 'assignment', 'children': ['26', '27']}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'featureList'}; {'id': '27', 'type': 'subscript', 'children': ['28', '31']}; {'id': '28', 'type': 'subscript', 'children': ['29', '30']}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'image'}; {'id': '30', 'type': 'string', 'children': [], 'value': "'graphInfo'"}; {'id': '31', 'type': 'string', 'children': [], 'value': "'features'"}; {'id': '32', 'type': 'with_statement', 'children': ['33', '43']}; {'id': '33', 'type': 'with_clause', 'children': ['34']}; {'id': '34', 'type': 'with_item', 'children': ['35']}; {'id': '35', 'type': 'as_pattern', 'children': ['36', '41']}; {'id': '36', 'type': 'call', 'children': ['37', '38']}; {'id': '37', 'type': 'identifier', 'children': [], 'value': 'open'}; {'id': '38', 'type': 'argument_list', 'children': ['39', '40']}; {'id': '39', 'type': 'identifier', 'children': [], 'value': 'filename'}; {'id': '40', 'type': 'string', 'children': [], 'value': "'w'"}; {'id': '41', 'type': 'as_pattern_target', 'children': ['42']}; {'id': '42', 'type': 'identifier', 'children': [], 'value': 'fp'}; {'id': '43', 'type': 'block', 'children': ['44']}; {'id': '44', 'type': 'for_statement', 'children': ['45', '46', '47']}; {'id': '45', 'type': 'identifier', 'children': [], 'value': 'feature'}; {'id': '46', 'type': 'identifier', 'children': [], 'value': 'featureList'}; {'id': '47', 'type': 'block', 'children': ['48']}; {'id': '48', 'type': 'expression_statement', 'children': ['49']}; {'id': '49', 'type': 'call', 'children': ['50', '53']}; {'id': '50', 'type': 'attribute', 'children': ['51', '52']}; {'id': '51', 'type': 'identifier', 'children': [], 'value': 'fp'}; {'id': '52', 'type': 'identifier', 'children': [], 'value': 'write'}; {'id': '53', 'type': 'argument_list', 'children': ['54']}; {'id': '54', 'type': 'binary_operator', 'children': ['55', '56'], 'value': '%'}; {'id': '55', 'type': 'string', 'children': [], 'value': "'%s\\n\\n'"}; {'id': '56', 'type': 'attribute', 'children': ['57', '58']}; {'id': '57', 'type': 'identifier', 'children': [], 'value': 'feature'}; {'id': '58', 'type': 'identifier', 'children': [], 'value': 'feature'}; {'id': '59', 'type': 'return_statement', 'children': ['60']}; {'id': '60', 'type': 'identifier', 'children': [], 'value': 'basename'} | Write a text file containing the features as a table.
@param i: The number of the image in self._images.
@param image: A member of self._images.
@return: The C{str} features file name - just the base name, not
including the path to the file. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '10']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'parse_pseudo_open'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6', '7', '8', '9']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'sel'}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'name'}; {'id': '7', 'type': 'identifier', 'children': [], 'value': 'has_selector'}; {'id': '8', 'type': 'identifier', 'children': [], 'value': 'iselector'}; {'id': '9', 'type': 'identifier', 'children': [], 'value': 'index'}; {'id': '10', 'type': 'block', 'children': ['11', '17', '26', '35', '51', '55']}; {'id': '11', 'type': 'expression_statement', 'children': ['12']}; {'id': '12', 'type': 'assignment', 'children': ['13', '14']}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'flags'}; {'id': '14', 'type': 'binary_operator', 'children': ['15', '16'], 'value': '|'}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'FLG_PSEUDO'}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'FLG_OPEN'}; {'id': '17', 'type': 'if_statement', 'children': ['18', '21']}; {'id': '18', 'type': 'comparison_operator', 'children': ['19', '20'], 'value': '=='}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'name'}; {'id': '20', 'type': 'string', 'children': [], 'value': "':not'"}; {'id': '21', 'type': 'block', 'children': ['22']}; {'id': '22', 'type': 'expression_statement', 'children': ['23']}; {'id': '23', 'type': 'augmented_assignment', 'children': ['24', '25'], 'value': '|='}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'flags'}; {'id': '25', 'type': 'identifier', 'children': [], 'value': 'FLG_NOT'}; {'id': '26', 'type': 'if_statement', 'children': ['27', '30']}; {'id': '27', 'type': 'comparison_operator', 'children': ['28', '29'], 'value': '=='}; {'id': '28', 'type': 'identifier', 'children': [], 'value': 'name'}; {'id': '29', 'type': 'string', 'children': [], 'value': "':has'"}; {'id': '30', 'type': 'block', 'children': ['31']}; {'id': '31', 'type': 'expression_statement', 'children': ['32']}; {'id': '32', 'type': 'augmented_assignment', 'children': ['33', '34'], 'value': '|='}; {'id': '33', 'type': 'identifier', 'children': [], 'value': 'flags'}; {'id': '34', 'type': 'identifier', 'children': [], 'value': 'FLG_RELATIVE'}; {'id': '35', 'type': 'expression_statement', 'children': ['36']}; {'id': '36', 'type': 'call', 'children': ['37', '42']}; {'id': '37', 'type': 'attribute', 'children': ['38', '41']}; {'id': '38', 'type': 'attribute', 'children': ['39', '40']}; {'id': '39', 'type': 'identifier', 'children': [], 'value': 'sel'}; {'id': '40', 'type': 'identifier', 'children': [], 'value': 'selectors'}; {'id': '41', 'type': 'identifier', 'children': [], 'value': 'append'}; {'id': '42', 'type': 'argument_list', 'children': ['43']}; {'id': '43', 'type': 'call', 'children': ['44', '47']}; {'id': '44', 'type': 'attribute', 'children': ['45', '46']}; {'id': '45', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '46', 'type': 'identifier', 'children': [], 'value': 'parse_selectors'}; {'id': '47', 'type': 'argument_list', 'children': ['48', '49', '50']}; {'id': '48', 'type': 'identifier', 'children': [], 'value': 'iselector'}; {'id': '49', 'type': 'identifier', 'children': [], 'value': 'index'}; {'id': '50', 'type': 'identifier', 'children': [], 'value': 'flags'}; {'id': '51', 'type': 'expression_statement', 'children': ['52']}; {'id': '52', 'type': 'assignment', 'children': ['53', '54']}; {'id': '53', 'type': 'identifier', 'children': [], 'value': 'has_selector'}; {'id': '54', 'type': 'True', 'children': []}; {'id': '55', 'type': 'return_statement', 'children': ['56']}; {'id': '56', 'type': 'identifier', 'children': [], 'value': 'has_selector'} | Parse pseudo with opening bracket. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'list_processed_parameter_groups'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'block', 'children': ['6', '17', '30', '38', '47', '55']}; {'id': '6', 'type': 'expression_statement', 'children': ['7']}; {'id': '7', 'type': 'assignment', 'children': ['8', '9']}; {'id': '8', 'type': 'identifier', 'children': [], 'value': 'path'}; {'id': '9', 'type': 'call', 'children': ['10', '13']}; {'id': '10', 'type': 'attribute', 'children': ['11', '12']}; {'id': '11', 'type': 'string', 'children': [], 'value': "'/archive/{}/parameter-groups'"}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'format'}; {'id': '13', 'type': 'argument_list', 'children': ['14']}; {'id': '14', 'type': 'attribute', 'children': ['15', '16']}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '16', 'type': 'identifier', 'children': [], 'value': '_instance'}; {'id': '17', 'type': 'expression_statement', 'children': ['18']}; {'id': '18', 'type': 'assignment', 'children': ['19', '20']}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'response'}; {'id': '20', 'type': 'call', 'children': ['21', '26']}; {'id': '21', 'type': 'attribute', 'children': ['22', '25']}; {'id': '22', 'type': 'attribute', 'children': ['23', '24']}; {'id': '23', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '24', 'type': 'identifier', 'children': [], 'value': '_client'}; {'id': '25', 'type': 'identifier', 'children': [], 'value': 'get_proto'}; {'id': '26', 'type': 'argument_list', 'children': ['27']}; {'id': '27', 'type': 'keyword_argument', 'children': ['28', '29']}; {'id': '28', 'type': 'identifier', 'children': [], 'value': 'path'}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'path'}; {'id': '30', 'type': 'expression_statement', 'children': ['31']}; {'id': '31', 'type': 'assignment', 'children': ['32', '33']}; {'id': '32', 'type': 'identifier', 'children': [], 'value': 'message'}; {'id': '33', 'type': 'call', 'children': ['34', '37']}; {'id': '34', 'type': 'attribute', 'children': ['35', '36']}; {'id': '35', 'type': 'identifier', 'children': [], 'value': 'archive_pb2'}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'ParameterGroupInfo'}; {'id': '37', 'type': 'argument_list', 'children': []}; {'id': '38', 'type': 'expression_statement', 'children': ['39']}; {'id': '39', 'type': 'call', 'children': ['40', '43']}; {'id': '40', 'type': 'attribute', 'children': ['41', '42']}; {'id': '41', 'type': 'identifier', 'children': [], 'value': 'message'}; {'id': '42', 'type': 'identifier', 'children': [], 'value': 'ParseFromString'}; {'id': '43', 'type': 'argument_list', 'children': ['44']}; {'id': '44', 'type': 'attribute', 'children': ['45', '46']}; {'id': '45', 'type': 'identifier', 'children': [], 'value': 'response'}; {'id': '46', 'type': 'identifier', 'children': [], 'value': 'content'}; {'id': '47', 'type': 'expression_statement', 'children': ['48']}; {'id': '48', 'type': 'assignment', 'children': ['49', '50']}; {'id': '49', 'type': 'identifier', 'children': [], 'value': 'groups'}; {'id': '50', 'type': 'call', 'children': ['51', '52']}; {'id': '51', 'type': 'identifier', 'children': [], 'value': 'getattr'}; {'id': '52', 'type': 'argument_list', 'children': ['53', '54']}; {'id': '53', 'type': 'identifier', 'children': [], 'value': 'message'}; {'id': '54', 'type': 'string', 'children': [], 'value': "'group'"}; {'id': '55', 'type': 'return_statement', 'children': ['56']}; {'id': '56', 'type': 'call', 'children': ['57', '58']}; {'id': '57', 'type': 'identifier', 'children': [], 'value': 'iter'}; {'id': '58', 'type': 'argument_list', 'children': ['59']}; {'id': '59', 'type': 'identifier', 'children': [], 'value': 'groups'} | Returns the existing parameter groups.
:rtype: ~collections.Iterable[str] |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '7']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'rename'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'store'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'src_path'}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'dst_path'}; {'id': '7', 'type': 'block', 'children': ['8', '15', '22']}; {'id': '8', 'type': 'expression_statement', 'children': ['9']}; {'id': '9', 'type': 'assignment', 'children': ['10', '11']}; {'id': '10', 'type': 'identifier', 'children': [], 'value': 'src_path'}; {'id': '11', 'type': 'call', 'children': ['12', '13']}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'normalize_storage_path'}; {'id': '13', 'type': 'argument_list', 'children': ['14']}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'src_path'}; {'id': '15', 'type': 'expression_statement', 'children': ['16']}; {'id': '16', 'type': 'assignment', 'children': ['17', '18']}; {'id': '17', 'type': 'identifier', 'children': [], 'value': 'dst_path'}; {'id': '18', 'type': 'call', 'children': ['19', '20']}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'normalize_storage_path'}; {'id': '20', 'type': 'argument_list', 'children': ['21']}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'dst_path'}; {'id': '22', 'type': 'if_statement', 'children': ['23', '28', '37']}; {'id': '23', 'type': 'call', 'children': ['24', '25']}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'hasattr'}; {'id': '25', 'type': 'argument_list', 'children': ['26', '27']}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'store'}; {'id': '27', 'type': 'string', 'children': [], 'value': "'rename'"}; {'id': '28', 'type': 'block', 'children': ['29']}; {'id': '29', 'type': 'expression_statement', 'children': ['30']}; {'id': '30', 'type': 'call', 'children': ['31', '34']}; {'id': '31', 'type': 'attribute', 'children': ['32', '33']}; {'id': '32', 'type': 'identifier', 'children': [], 'value': 'store'}; {'id': '33', 'type': 'identifier', 'children': [], 'value': 'rename'}; {'id': '34', 'type': 'argument_list', 'children': ['35', '36']}; {'id': '35', 'type': 'identifier', 'children': [], 'value': 'src_path'}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'dst_path'}; {'id': '37', 'type': 'else_clause', 'children': ['38']}; {'id': '38', 'type': 'block', 'children': ['39']}; {'id': '39', 'type': 'expression_statement', 'children': ['40']}; {'id': '40', 'type': 'call', 'children': ['41', '42']}; {'id': '41', 'type': 'identifier', 'children': [], 'value': '_rename_from_keys'}; {'id': '42', 'type': 'argument_list', 'children': ['43', '44', '45']}; {'id': '43', 'type': 'identifier', 'children': [], 'value': 'store'}; {'id': '44', 'type': 'identifier', 'children': [], 'value': 'src_path'}; {'id': '45', 'type': 'identifier', 'children': [], 'value': 'dst_path'} | Rename all items under the given path. If `store` provides a `rename` method,
this will be called, otherwise will fall back to implementation via the
`MutableMapping` interface. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'cycle'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'channel'}; {'id': '6', 'type': 'block', 'children': ['7', '21', '31', '39']}; {'id': '7', 'type': 'if_statement', 'children': ['8', '15']}; {'id': '8', 'type': 'not_operator', 'children': ['9']}; {'id': '9', 'type': 'call', 'children': ['10', '13']}; {'id': '10', 'type': 'attribute', 'children': ['11', '12']}; {'id': '11', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'in_channel'}; {'id': '13', 'type': 'argument_list', 'children': ['14']}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'channel'}; {'id': '15', 'type': 'block', 'children': ['16']}; {'id': '16', 'type': 'raise_statement', 'children': ['17']}; {'id': '17', 'type': 'call', 'children': ['18', '19']}; {'id': '18', 'type': 'identifier', 'children': [], 'value': 'NotInChannel'}; {'id': '19', 'type': 'argument_list', 'children': ['20']}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'channel'}; {'id': '21', 'type': 'expression_statement', 'children': ['22']}; {'id': '22', 'type': 'assignment', 'children': ['23', '24']}; {'id': '23', 'type': 'identifier', 'children': [], 'value': 'password'}; {'id': '24', 'type': 'subscript', 'children': ['25', '30']}; {'id': '25', 'type': 'subscript', 'children': ['26', '29']}; {'id': '26', 'type': 'attribute', 'children': ['27', '28']}; {'id': '27', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '28', 'type': 'identifier', 'children': [], 'value': 'channels'}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'channel'}; {'id': '30', 'type': 'string', 'children': [], 'value': "'password'"}; {'id': '31', 'type': 'expression_statement', 'children': ['32']}; {'id': '32', 'type': 'await', 'children': ['33']}; {'id': '33', 'type': 'call', 'children': ['34', '37']}; {'id': '34', 'type': 'attribute', 'children': ['35', '36']}; {'id': '35', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'part'}; {'id': '37', 'type': 'argument_list', 'children': ['38']}; {'id': '38', 'type': 'identifier', 'children': [], 'value': 'channel'}; {'id': '39', 'type': 'expression_statement', 'children': ['40']}; {'id': '40', 'type': 'await', 'children': ['41']}; {'id': '41', 'type': 'call', 'children': ['42', '45']}; {'id': '42', 'type': 'attribute', 'children': ['43', '44']}; {'id': '43', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '44', 'type': 'identifier', 'children': [], 'value': 'join'}; {'id': '45', 'type': 'argument_list', 'children': ['46', '47']}; {'id': '46', 'type': 'identifier', 'children': [], 'value': 'channel'}; {'id': '47', 'type': 'identifier', 'children': [], 'value': 'password'} | Rejoin channel. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_set_scores'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'block', 'children': ['6', '10', '16', '22', '28', '34', '40', '83']}; {'id': '6', 'type': 'expression_statement', 'children': ['7']}; {'id': '7', 'type': 'assignment', 'children': ['8', '9']}; {'id': '8', 'type': 'identifier', 'children': [], 'value': 'anom_scores'}; {'id': '9', 'type': 'dictionary', 'children': []}; {'id': '10', 'type': 'expression_statement', 'children': ['11']}; {'id': '11', 'type': 'call', 'children': ['12', '15']}; {'id': '12', 'type': 'attribute', 'children': ['13', '14']}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '14', 'type': 'identifier', 'children': [], 'value': '_generate_SAX'}; {'id': '15', 'type': 'argument_list', 'children': []}; {'id': '16', 'type': 'expression_statement', 'children': ['17']}; {'id': '17', 'type': 'call', 'children': ['18', '21']}; {'id': '18', 'type': 'attribute', 'children': ['19', '20']}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '20', 'type': 'identifier', 'children': [], 'value': '_construct_all_SAX_chunk_dict'}; {'id': '21', 'type': 'argument_list', 'children': []}; {'id': '22', 'type': 'expression_statement', 'children': ['23']}; {'id': '23', 'type': 'assignment', 'children': ['24', '25']}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'length'}; {'id': '25', 'type': 'attribute', 'children': ['26', '27']}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '27', 'type': 'identifier', 'children': [], 'value': 'time_series_length'}; {'id': '28', 'type': 'expression_statement', 'children': ['29']}; {'id': '29', 'type': 'assignment', 'children': ['30', '31']}; {'id': '30', 'type': 'identifier', 'children': [], 'value': 'lws'}; {'id': '31', 'type': 'attribute', 'children': ['32', '33']}; {'id': '32', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '33', 'type': 'identifier', 'children': [], 'value': 'lag_window_size'}; {'id': '34', 'type': 'expression_statement', 'children': ['35']}; {'id': '35', 'type': 'assignment', 'children': ['36', '37']}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'fws'}; {'id': '37', 'type': 'attribute', 'children': ['38', '39']}; {'id': '38', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '39', 'type': 'identifier', 'children': [], 'value': 'future_window_size'}; {'id': '40', 'type': 'for_statement', 'children': ['41', '44', '52']}; {'id': '41', 'type': 'pattern_list', 'children': ['42', '43']}; {'id': '42', 'type': 'identifier', 'children': [], 'value': 'i'}; {'id': '43', 'type': 'identifier', 'children': [], 'value': 'timestamp'}; {'id': '44', 'type': 'call', 'children': ['45', '46']}; {'id': '45', 'type': 'identifier', 'children': [], 'value': 'enumerate'}; {'id': '46', 'type': 'argument_list', 'children': ['47']}; {'id': '47', 'type': 'attribute', 'children': ['48', '51']}; {'id': '48', 'type': 'attribute', 'children': ['49', '50']}; {'id': '49', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '50', 'type': 'identifier', 'children': [], 'value': 'time_series'}; {'id': '51', 'type': 'identifier', 'children': [], 'value': 'timestamps'}; {'id': '52', 'type': 'block', 'children': ['53']}; {'id': '53', 'type': 'if_statement', 'children': ['54', '63', '70']}; {'id': '54', 'type': 'boolean_operator', 'children': ['55', '58'], 'value': 'or'}; {'id': '55', 'type': 'comparison_operator', 'children': ['56', '57'], 'value': '<'}; {'id': '56', 'type': 'identifier', 'children': [], 'value': 'i'}; {'id': '57', 'type': 'identifier', 'children': [], 'value': 'lws'}; {'id': '58', 'type': 'comparison_operator', 'children': ['59', '60'], 'value': '>'}; {'id': '59', 'type': 'identifier', 'children': [], 'value': 'i'}; {'id': '60', 'type': 'binary_operator', 'children': ['61', '62'], 'value': '-'}; {'id': '61', 'type': 'identifier', 'children': [], 'value': 'length'}; {'id': '62', 'type': 'identifier', 'children': [], 'value': 'fws'}; {'id': '63', 'type': 'block', 'children': ['64']}; {'id': '64', 'type': 'expression_statement', 'children': ['65']}; {'id': '65', 'type': 'assignment', 'children': ['66', '69']}; {'id': '66', 'type': 'subscript', 'children': ['67', '68']}; {'id': '67', 'type': 'identifier', 'children': [], 'value': 'anom_scores'}; {'id': '68', 'type': 'identifier', 'children': [], 'value': 'timestamp'}; {'id': '69', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '70', 'type': 'else_clause', 'children': ['71']}; {'id': '71', 'type': 'block', 'children': ['72']}; {'id': '72', 'type': 'expression_statement', 'children': ['73']}; {'id': '73', 'type': 'assignment', 'children': ['74', '77']}; {'id': '74', 'type': 'subscript', 'children': ['75', '76']}; {'id': '75', 'type': 'identifier', 'children': [], 'value': 'anom_scores'}; {'id': '76', 'type': 'identifier', 'children': [], 'value': 'timestamp'}; {'id': '77', 'type': 'call', 'children': ['78', '81']}; {'id': '78', 'type': 'attribute', 'children': ['79', '80']}; {'id': '79', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '80', 'type': 'identifier', 'children': [], 'value': '_compute_anom_score_between_two_windows'}; {'id': '81', 'type': 'argument_list', 'children': ['82']}; {'id': '82', 'type': 'identifier', 'children': [], 'value': 'i'}; {'id': '83', 'type': 'expression_statement', 'children': ['84']}; {'id': '84', 'type': 'assignment', 'children': ['85', '88']}; {'id': '85', 'type': 'attribute', 'children': ['86', '87']}; {'id': '86', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '87', 'type': 'identifier', 'children': [], 'value': 'anom_scores'}; {'id': '88', 'type': 'call', 'children': ['89', '90']}; {'id': '89', 'type': 'identifier', 'children': [], 'value': 'TimeSeries'}; {'id': '90', 'type': 'argument_list', 'children': ['91']}; {'id': '91', 'type': 'call', 'children': ['92', '95']}; {'id': '92', 'type': 'attribute', 'children': ['93', '94']}; {'id': '93', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '94', 'type': 'identifier', 'children': [], 'value': '_denoise_scores'}; {'id': '95', 'type': 'argument_list', 'children': ['96']}; {'id': '96', 'type': 'identifier', 'children': [], 'value': 'anom_scores'} | Compute anomaly scores for the time series by sliding both lagging window and future window. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'Equals'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'other'}; {'id': '6', 'type': 'block', 'children': ['7', '14', '41']}; {'id': '7', 'type': 'if_statement', 'children': ['8', '11']}; {'id': '8', 'type': 'comparison_operator', 'children': ['9', '10'], 'value': 'is'}; {'id': '9', 'type': 'identifier', 'children': [], 'value': 'other'}; {'id': '10', 'type': 'None', 'children': []}; {'id': '11', 'type': 'block', 'children': ['12']}; {'id': '12', 'type': 'return_statement', 'children': ['13']}; {'id': '13', 'type': 'False', 'children': []}; {'id': '14', 'type': 'if_statement', 'children': ['15', '38']}; {'id': '15', 'type': 'boolean_operator', 'children': ['16', '31'], 'value': 'and'}; {'id': '16', 'type': 'comparison_operator', 'children': ['17', '24'], 'value': '=='}; {'id': '17', 'type': 'call', 'children': ['18', '23']}; {'id': '18', 'type': 'attribute', 'children': ['19', '22']}; {'id': '19', 'type': 'attribute', 'children': ['20', '21']}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'other'}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'PrevHash'}; {'id': '22', 'type': 'identifier', 'children': [], 'value': 'ToBytes'}; {'id': '23', 'type': 'argument_list', 'children': []}; {'id': '24', 'type': 'call', 'children': ['25', '30']}; {'id': '25', 'type': 'attribute', 'children': ['26', '29']}; {'id': '26', 'type': 'attribute', 'children': ['27', '28']}; {'id': '27', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '28', 'type': 'identifier', 'children': [], 'value': 'PrevHash'}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'ToBytes'}; {'id': '30', 'type': 'argument_list', 'children': []}; {'id': '31', 'type': 'comparison_operator', 'children': ['32', '35'], 'value': '=='}; {'id': '32', 'type': 'attribute', 'children': ['33', '34']}; {'id': '33', 'type': 'identifier', 'children': [], 'value': 'other'}; {'id': '34', 'type': 'identifier', 'children': [], 'value': 'PrevIndex'}; {'id': '35', 'type': 'attribute', 'children': ['36', '37']}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '37', 'type': 'identifier', 'children': [], 'value': 'PrevIndex'}; {'id': '38', 'type': 'block', 'children': ['39']}; {'id': '39', 'type': 'return_statement', 'children': ['40']}; {'id': '40', 'type': 'True', 'children': []}; {'id': '41', 'type': 'return_statement', 'children': ['42']}; {'id': '42', 'type': 'False', 'children': []} | Test for equality.
Args:
other (obj):
Returns:
bool: True `other` equals self. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '13', '15']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'delete_state_changes'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'typed_parameter', 'children': ['6', '7']}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'state_changes_to_delete'}; {'id': '7', 'type': 'type', 'children': ['8']}; {'id': '8', 'type': 'generic_type', 'children': ['9', '10']}; {'id': '9', 'type': 'identifier', 'children': [], 'value': 'List'}; {'id': '10', 'type': 'type_parameter', 'children': ['11']}; {'id': '11', 'type': 'type', 'children': ['12']}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'int'}; {'id': '13', 'type': 'type', 'children': ['14']}; {'id': '14', 'type': 'None', 'children': []}; {'id': '15', 'type': 'block', 'children': ['16']}; {'id': '16', 'type': 'with_statement', 'children': ['17', '26']}; {'id': '17', 'type': 'with_clause', 'children': ['18', '22']}; {'id': '18', 'type': 'with_item', 'children': ['19']}; {'id': '19', 'type': 'attribute', 'children': ['20', '21']}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'write_lock'}; {'id': '22', 'type': 'with_item', 'children': ['23']}; {'id': '23', 'type': 'attribute', 'children': ['24', '25']}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '25', 'type': 'identifier', 'children': [], 'value': 'conn'}; {'id': '26', 'type': 'block', 'children': ['27']}; {'id': '27', 'type': 'expression_statement', 'children': ['28']}; {'id': '28', 'type': 'call', 'children': ['29', '34']}; {'id': '29', 'type': 'attribute', 'children': ['30', '33']}; {'id': '30', 'type': 'attribute', 'children': ['31', '32']}; {'id': '31', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '32', 'type': 'identifier', 'children': [], 'value': 'conn'}; {'id': '33', 'type': 'identifier', 'children': [], 'value': 'executemany'}; {'id': '34', 'type': 'argument_list', 'children': ['35', '36']}; {'id': '35', 'type': 'string', 'children': [], 'value': "'DELETE FROM state_events WHERE identifier = ?'"}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'state_changes_to_delete'} | Delete state changes.
Args:
state_changes_to_delete: List of ids to delete. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'get_real_end_line'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'token'}; {'id': '5', 'type': 'block', 'children': ['6', '16', '28', '38', '81']}; {'id': '6', 'type': 'expression_statement', 'children': ['7']}; {'id': '7', 'type': 'assignment', 'children': ['8', '9']}; {'id': '8', 'type': 'identifier', 'children': [], 'value': 'end_line'}; {'id': '9', 'type': 'binary_operator', 'children': ['10', '15'], 'value': '+'}; {'id': '10', 'type': 'attribute', 'children': ['11', '14']}; {'id': '11', 'type': 'attribute', 'children': ['12', '13']}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'token'}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'end_mark'}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'line'}; {'id': '15', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '16', 'type': 'if_statement', 'children': ['17', '25']}; {'id': '17', 'type': 'not_operator', 'children': ['18']}; {'id': '18', 'type': 'call', 'children': ['19', '20']}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'isinstance'}; {'id': '20', 'type': 'argument_list', 'children': ['21', '22']}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'token'}; {'id': '22', 'type': 'attribute', 'children': ['23', '24']}; {'id': '23', 'type': 'identifier', 'children': [], 'value': 'yaml'}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'ScalarToken'}; {'id': '25', 'type': 'block', 'children': ['26']}; {'id': '26', 'type': 'return_statement', 'children': ['27']}; {'id': '27', 'type': 'identifier', 'children': [], 'value': 'end_line'}; {'id': '28', 'type': 'expression_statement', 'children': ['29']}; {'id': '29', 'type': 'assignment', 'children': ['30', '31']}; {'id': '30', 'type': 'identifier', 'children': [], 'value': 'pos'}; {'id': '31', 'type': 'binary_operator', 'children': ['32', '37'], 'value': '-'}; {'id': '32', 'type': 'attribute', 'children': ['33', '36']}; {'id': '33', 'type': 'attribute', 'children': ['34', '35']}; {'id': '34', 'type': 'identifier', 'children': [], 'value': 'token'}; {'id': '35', 'type': 'identifier', 'children': [], 'value': 'end_mark'}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'pointer'}; {'id': '37', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '38', 'type': 'while_statement', 'children': ['39', '61']}; {'id': '39', 'type': '()', 'children': ['40']}; {'id': '40', 'type': 'boolean_operator', 'children': ['41', '50'], 'value': 'and'}; {'id': '41', 'type': 'comparison_operator', 'children': ['42', '43'], 'value': '>='}; {'id': '42', 'type': 'identifier', 'children': [], 'value': 'pos'}; {'id': '43', 'type': 'binary_operator', 'children': ['44', '49'], 'value': '-'}; {'id': '44', 'type': 'attribute', 'children': ['45', '48']}; {'id': '45', 'type': 'attribute', 'children': ['46', '47']}; {'id': '46', 'type': 'identifier', 'children': [], 'value': 'token'}; {'id': '47', 'type': 'identifier', 'children': [], 'value': 'start_mark'}; {'id': '48', 'type': 'identifier', 'children': [], 'value': 'pointer'}; {'id': '49', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '50', 'type': 'comparison_operator', 'children': ['51', '58'], 'value': 'in'}; {'id': '51', 'type': 'subscript', 'children': ['52', '57']}; {'id': '52', 'type': 'attribute', 'children': ['53', '56']}; {'id': '53', 'type': 'attribute', 'children': ['54', '55']}; {'id': '54', 'type': 'identifier', 'children': [], 'value': 'token'}; {'id': '55', 'type': 'identifier', 'children': [], 'value': 'end_mark'}; {'id': '56', 'type': 'identifier', 'children': [], 'value': 'buffer'}; {'id': '57', 'type': 'identifier', 'children': [], 'value': 'pos'}; {'id': '58', 'type': 'attribute', 'children': ['59', '60']}; {'id': '59', 'type': 'identifier', 'children': [], 'value': 'string'}; {'id': '60', 'type': 'identifier', 'children': [], 'value': 'whitespace'}; {'id': '61', 'type': 'block', 'children': ['62', '77']}; {'id': '62', 'type': 'if_statement', 'children': ['63', '72']}; {'id': '63', 'type': 'comparison_operator', 'children': ['64', '71'], 'value': '=='}; {'id': '64', 'type': 'subscript', 'children': ['65', '70']}; {'id': '65', 'type': 'attribute', 'children': ['66', '69']}; {'id': '66', 'type': 'attribute', 'children': ['67', '68']}; {'id': '67', 'type': 'identifier', 'children': [], 'value': 'token'}; {'id': '68', 'type': 'identifier', 'children': [], 'value': 'end_mark'}; {'id': '69', 'type': 'identifier', 'children': [], 'value': 'buffer'}; {'id': '70', 'type': 'identifier', 'children': [], 'value': 'pos'}; {'id': '71', 'type': 'string', 'children': [], 'value': "'\\n'"}; {'id': '72', 'type': 'block', 'children': ['73']}; {'id': '73', 'type': 'expression_statement', 'children': ['74']}; {'id': '74', 'type': 'augmented_assignment', 'children': ['75', '76'], 'value': '-='}; {'id': '75', 'type': 'identifier', 'children': [], 'value': 'end_line'}; {'id': '76', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '77', 'type': 'expression_statement', 'children': ['78']}; {'id': '78', 'type': 'augmented_assignment', 'children': ['79', '80'], 'value': '-='}; {'id': '79', 'type': 'identifier', 'children': [], 'value': 'pos'}; {'id': '80', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '81', 'type': 'return_statement', 'children': ['82']}; {'id': '82', 'type': 'identifier', 'children': [], 'value': 'end_line'} | Finds the line on which the token really ends.
With pyyaml, scalar tokens often end on a next line. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'get_msg'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'block', 'children': ['6', '10', '45', '49', '72']}; {'id': '6', 'type': 'expression_statement', 'children': ['7']}; {'id': '7', 'type': 'assignment', 'children': ['8', '9']}; {'id': '8', 'type': 'identifier', 'children': [], 'value': 'width'}; {'id': '9', 'type': 'integer', 'children': [], 'value': '72'}; {'id': '10', 'type': 'expression_statement', 'children': ['11']}; {'id': '11', 'type': 'assignment', 'children': ['12', '13']}; {'id': '12', 'type': 'identifier', 'children': [], 'value': '_msg'}; {'id': '13', 'type': 'binary_operator', 'children': ['14', '17'], 'value': '%'}; {'id': '14', 'type': 'attribute', 'children': ['15', '16']}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'msg'}; {'id': '17', 'type': 'dictionary', 'children': ['18', '23', '28', '33', '38']}; {'id': '18', 'type': 'pair', 'children': ['19', '20']}; {'id': '19', 'type': 'string', 'children': [], 'value': "'distro'"}; {'id': '20', 'type': 'attribute', 'children': ['21', '22']}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '22', 'type': 'identifier', 'children': [], 'value': 'distro'}; {'id': '23', 'type': 'pair', 'children': ['24', '25']}; {'id': '24', 'type': 'string', 'children': [], 'value': "'vendor'"}; {'id': '25', 'type': 'attribute', 'children': ['26', '27']}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '27', 'type': 'identifier', 'children': [], 'value': 'vendor'}; {'id': '28', 'type': 'pair', 'children': ['29', '30']}; {'id': '29', 'type': 'string', 'children': [], 'value': "'vendor_url'"}; {'id': '30', 'type': 'attribute', 'children': ['31', '32']}; {'id': '31', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '32', 'type': 'identifier', 'children': [], 'value': 'vendor_url'}; {'id': '33', 'type': 'pair', 'children': ['34', '35']}; {'id': '34', 'type': 'string', 'children': [], 'value': "'vendor_text'"}; {'id': '35', 'type': 'attribute', 'children': ['36', '37']}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '37', 'type': 'identifier', 'children': [], 'value': 'vendor_text'}; {'id': '38', 'type': 'pair', 'children': ['39', '40']}; {'id': '39', 'type': 'string', 'children': [], 'value': "'tmpdir'"}; {'id': '40', 'type': 'subscript', 'children': ['41', '44']}; {'id': '41', 'type': 'attribute', 'children': ['42', '43']}; {'id': '42', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '43', 'type': 'identifier', 'children': [], 'value': 'commons'}; {'id': '44', 'type': 'string', 'children': [], 'value': "'tmpdir'"}; {'id': '45', 'type': 'expression_statement', 'children': ['46']}; {'id': '46', 'type': 'assignment', 'children': ['47', '48']}; {'id': '47', 'type': 'identifier', 'children': [], 'value': '_fmt'}; {'id': '48', 'type': 'string', 'children': [], 'value': '""'}; {'id': '49', 'type': 'for_statement', 'children': ['50', '51', '56']}; {'id': '50', 'type': 'identifier', 'children': [], 'value': 'line'}; {'id': '51', 'type': 'call', 'children': ['52', '55']}; {'id': '52', 'type': 'attribute', 'children': ['53', '54']}; {'id': '53', 'type': 'identifier', 'children': [], 'value': '_msg'}; {'id': '54', 'type': 'identifier', 'children': [], 'value': 'splitlines'}; {'id': '55', 'type': 'argument_list', 'children': []}; {'id': '56', 'type': 'block', 'children': ['57']}; {'id': '57', 'type': 'expression_statement', 'children': ['58']}; {'id': '58', 'type': 'assignment', 'children': ['59', '60']}; {'id': '59', 'type': 'identifier', 'children': [], 'value': '_fmt'}; {'id': '60', 'type': 'binary_operator', 'children': ['61', '71'], 'value': '+'}; {'id': '61', 'type': 'binary_operator', 'children': ['62', '63'], 'value': '+'}; {'id': '62', 'type': 'identifier', 'children': [], 'value': '_fmt'}; {'id': '63', 'type': 'call', 'children': ['64', '65']}; {'id': '64', 'type': 'identifier', 'children': [], 'value': 'fill'}; {'id': '65', 'type': 'argument_list', 'children': ['66', '67', '68']}; {'id': '66', 'type': 'identifier', 'children': [], 'value': 'line'}; {'id': '67', 'type': 'identifier', 'children': [], 'value': 'width'}; {'id': '68', 'type': 'keyword_argument', 'children': ['69', '70']}; {'id': '69', 'type': 'identifier', 'children': [], 'value': 'replace_whitespace'}; {'id': '70', 'type': 'False', 'children': []}; {'id': '71', 'type': 'string', 'children': [], 'value': "'\\n'"}; {'id': '72', 'type': 'return_statement', 'children': ['73']}; {'id': '73', 'type': 'identifier', 'children': [], 'value': '_fmt'} | This method is used to prepare the preamble text to display to
the user in non-batch mode. If your policy sets self.distro that
text will be substituted accordingly. You can also override this
method to do something more complicated. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '17', '23']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'handle_dataframe'}; {'id': '3', 'type': 'parameters', 'children': ['4', '10', '11', '12', '13', '14']}; {'id': '4', 'type': 'typed_parameter', 'children': ['5', '6']}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'df'}; {'id': '6', 'type': 'type', 'children': ['7']}; {'id': '7', 'type': 'attribute', 'children': ['8', '9']}; {'id': '8', 'type': 'identifier', 'children': [], 'value': 'pd'}; {'id': '9', 'type': 'identifier', 'children': [], 'value': 'DataFrame'}; {'id': '10', 'type': 'identifier', 'children': [], 'value': 'entrez_id_name'}; {'id': '11', 'type': 'identifier', 'children': [], 'value': 'log2_fold_change_name'}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'adjusted_p_value_name'}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'entrez_delimiter'}; {'id': '14', 'type': 'default_parameter', 'children': ['15', '16']}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'base_mean'}; {'id': '16', 'type': 'None', 'children': []}; {'id': '17', 'type': 'type', 'children': ['18']}; {'id': '18', 'type': 'generic_type', 'children': ['19', '20']}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'List'}; {'id': '20', 'type': 'type_parameter', 'children': ['21']}; {'id': '21', 'type': 'type', 'children': ['22']}; {'id': '22', 'type': 'identifier', 'children': [], 'value': 'Gene'}; {'id': '23', 'type': 'block', 'children': ['24', '31', '55', '68', '81', '94']}; {'id': '24', 'type': 'expression_statement', 'children': ['25']}; {'id': '25', 'type': 'call', 'children': ['26', '29']}; {'id': '26', 'type': 'attribute', 'children': ['27', '28']}; {'id': '27', 'type': 'identifier', 'children': [], 'value': 'logger'}; {'id': '28', 'type': 'identifier', 'children': [], 'value': 'info'}; {'id': '29', 'type': 'argument_list', 'children': ['30']}; {'id': '30', 'type': 'string', 'children': [], 'value': '"In _handle_df()"'}; {'id': '31', 'type': 'if_statement', 'children': ['32', '41']}; {'id': '32', 'type': 'boolean_operator', 'children': ['33', '36'], 'value': 'and'}; {'id': '33', 'type': 'comparison_operator', 'children': ['34', '35'], 'value': 'is not'}; {'id': '34', 'type': 'identifier', 'children': [], 'value': 'base_mean'}; {'id': '35', 'type': 'None', 'children': []}; {'id': '36', 'type': 'comparison_operator', 'children': ['37', '38'], 'value': 'in'}; {'id': '37', 'type': 'identifier', 'children': [], 'value': 'base_mean'}; {'id': '38', 'type': 'attribute', 'children': ['39', '40']}; {'id': '39', 'type': 'identifier', 'children': [], 'value': 'df'}; {'id': '40', 'type': 'identifier', 'children': [], 'value': 'columns'}; {'id': '41', 'type': 'block', 'children': ['42']}; {'id': '42', 'type': 'expression_statement', 'children': ['43']}; {'id': '43', 'type': 'assignment', 'children': ['44', '45']}; {'id': '44', 'type': 'identifier', 'children': [], 'value': 'df'}; {'id': '45', 'type': 'subscript', 'children': ['46', '47']}; {'id': '46', 'type': 'identifier', 'children': [], 'value': 'df'}; {'id': '47', 'type': 'call', 'children': ['48', '51']}; {'id': '48', 'type': 'attribute', 'children': ['49', '50']}; {'id': '49', 'type': 'identifier', 'children': [], 'value': 'pd'}; {'id': '50', 'type': 'identifier', 'children': [], 'value': 'notnull'}; {'id': '51', 'type': 'argument_list', 'children': ['52']}; {'id': '52', 'type': 'subscript', 'children': ['53', '54']}; {'id': '53', 'type': 'identifier', 'children': [], 'value': 'df'}; {'id': '54', 'type': 'identifier', 'children': [], 'value': 'base_mean'}; {'id': '55', 'type': 'expression_statement', 'children': ['56']}; {'id': '56', 'type': 'assignment', 'children': ['57', '58']}; {'id': '57', 'type': 'identifier', 'children': [], 'value': 'df'}; {'id': '58', 'type': 'subscript', 'children': ['59', '60']}; {'id': '59', 'type': 'identifier', 'children': [], 'value': 'df'}; {'id': '60', 'type': 'call', 'children': ['61', '64']}; {'id': '61', 'type': 'attribute', 'children': ['62', '63']}; {'id': '62', 'type': 'identifier', 'children': [], 'value': 'pd'}; {'id': '63', 'type': 'identifier', 'children': [], 'value': 'notnull'}; {'id': '64', 'type': 'argument_list', 'children': ['65']}; {'id': '65', 'type': 'subscript', 'children': ['66', '67']}; {'id': '66', 'type': 'identifier', 'children': [], 'value': 'df'}; {'id': '67', 'type': 'identifier', 'children': [], 'value': 'entrez_id_name'}; {'id': '68', 'type': 'expression_statement', 'children': ['69']}; {'id': '69', 'type': 'assignment', 'children': ['70', '71']}; {'id': '70', 'type': 'identifier', 'children': [], 'value': 'df'}; {'id': '71', 'type': 'subscript', 'children': ['72', '73']}; {'id': '72', 'type': 'identifier', 'children': [], 'value': 'df'}; {'id': '73', 'type': 'call', 'children': ['74', '77']}; {'id': '74', 'type': 'attribute', 'children': ['75', '76']}; {'id': '75', 'type': 'identifier', 'children': [], 'value': 'pd'}; {'id': '76', 'type': 'identifier', 'children': [], 'value': 'notnull'}; {'id': '77', 'type': 'argument_list', 'children': ['78']}; {'id': '78', 'type': 'subscript', 'children': ['79', '80']}; {'id': '79', 'type': 'identifier', 'children': [], 'value': 'df'}; {'id': '80', 'type': 'identifier', 'children': [], 'value': 'log2_fold_change_name'}; {'id': '81', 'type': 'expression_statement', 'children': ['82']}; {'id': '82', 'type': 'assignment', 'children': ['83', '84']}; {'id': '83', 'type': 'identifier', 'children': [], 'value': 'df'}; {'id': '84', 'type': 'subscript', 'children': ['85', '86']}; {'id': '85', 'type': 'identifier', 'children': [], 'value': 'df'}; {'id': '86', 'type': 'call', 'children': ['87', '90']}; {'id': '87', 'type': 'attribute', 'children': ['88', '89']}; {'id': '88', 'type': 'identifier', 'children': [], 'value': 'pd'}; {'id': '89', 'type': 'identifier', 'children': [], 'value': 'notnull'}; {'id': '90', 'type': 'argument_list', 'children': ['91']}; {'id': '91', 'type': 'subscript', 'children': ['92', '93']}; {'id': '92', 'type': 'identifier', 'children': [], 'value': 'df'}; {'id': '93', 'type': 'identifier', 'children': [], 'value': 'adjusted_p_value_name'}; {'id': '94', 'type': 'return_statement', 'children': ['95']}; {'id': '95', 'type': 'list_comprehension', 'children': ['96', '112', '121']}; {'id': '96', 'type': 'call', 'children': ['97', '98']}; {'id': '97', 'type': 'identifier', 'children': [], 'value': 'Gene'}; {'id': '98', 'type': 'argument_list', 'children': ['99', '102', '107']}; {'id': '99', 'type': 'keyword_argument', 'children': ['100', '101']}; {'id': '100', 'type': 'identifier', 'children': [], 'value': 'entrez_id'}; {'id': '101', 'type': 'identifier', 'children': [], 'value': 'entrez_id'}; {'id': '102', 'type': 'keyword_argument', 'children': ['103', '104']}; {'id': '103', 'type': 'identifier', 'children': [], 'value': 'log2_fold_change'}; {'id': '104', 'type': 'subscript', 'children': ['105', '106']}; {'id': '105', 'type': 'identifier', 'children': [], 'value': 'data'}; {'id': '106', 'type': 'identifier', 'children': [], 'value': 'log2_fold_change_name'}; {'id': '107', 'type': 'keyword_argument', 'children': ['108', '109']}; {'id': '108', 'type': 'identifier', 'children': [], 'value': 'padj'}; {'id': '109', 'type': 'subscript', 'children': ['110', '111']}; {'id': '110', 'type': 'identifier', 'children': [], 'value': 'data'}; {'id': '111', 'type': 'identifier', 'children': [], 'value': 'adjusted_p_value_name'}; {'id': '112', 'type': 'for_in_clause', 'children': ['113', '116']}; {'id': '113', 'type': 'pattern_list', 'children': ['114', '115']}; {'id': '114', 'type': 'identifier', 'children': [], 'value': '_'}; {'id': '115', 'type': 'identifier', 'children': [], 'value': 'data'}; {'id': '116', 'type': 'call', 'children': ['117', '120']}; {'id': '117', 'type': 'attribute', 'children': ['118', '119']}; {'id': '118', 'type': 'identifier', 'children': [], 'value': 'df'}; {'id': '119', 'type': 'identifier', 'children': [], 'value': 'iterrows'}; {'id': '120', 'type': 'argument_list', 'children': []}; {'id': '121', 'type': 'for_in_clause', 'children': ['122', '123']}; {'id': '122', 'type': 'identifier', 'children': [], 'value': 'entrez_id'}; {'id': '123', 'type': 'call', 'children': ['124', '132']}; {'id': '124', 'type': 'attribute', 'children': ['125', '131']}; {'id': '125', 'type': 'call', 'children': ['126', '127']}; {'id': '126', 'type': 'identifier', 'children': [], 'value': 'str'}; {'id': '127', 'type': 'argument_list', 'children': ['128']}; {'id': '128', 'type': 'subscript', 'children': ['129', '130']}; {'id': '129', 'type': 'identifier', 'children': [], 'value': 'data'}; {'id': '130', 'type': 'identifier', 'children': [], 'value': 'entrez_id_name'}; {'id': '131', 'type': 'identifier', 'children': [], 'value': 'split'}; {'id': '132', 'type': 'argument_list', 'children': ['133']}; {'id': '133', 'type': 'identifier', 'children': [], 'value': 'entrez_delimiter'} | Convert data frame on differential expression values as Gene objects.
:param df: Data frame with columns showing values on differential
expression.
:param cfp: An object that includes paths, cutoffs and other information.
:return list: A list of Gene objects. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'build_routes'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'pfeed'}; {'id': '5', 'type': 'block', 'children': ['6', '26', '41', '45']}; {'id': '6', 'type': 'expression_statement', 'children': ['7']}; {'id': '7', 'type': 'assignment', 'children': ['8', '9']}; {'id': '8', 'type': 'identifier', 'children': [], 'value': 'f'}; {'id': '9', 'type': 'call', 'children': ['10', '25']}; {'id': '10', 'type': 'attribute', 'children': ['11', '24']}; {'id': '11', 'type': 'call', 'children': ['12', '23']}; {'id': '12', 'type': 'attribute', 'children': ['13', '22']}; {'id': '13', 'type': 'subscript', 'children': ['14', '17']}; {'id': '14', 'type': 'attribute', 'children': ['15', '16']}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'pfeed'}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'frequencies'}; {'id': '17', 'type': 'list', 'children': ['18', '19', '20', '21'], 'value': "['route_short_name', 'route_long_name',\n 'route_type', 'shape_id']"}; {'id': '18', 'type': 'string', 'children': [], 'value': "'route_short_name'"}; {'id': '19', 'type': 'string', 'children': [], 'value': "'route_long_name'"}; {'id': '20', 'type': 'string', 'children': [], 'value': "'route_type'"}; {'id': '21', 'type': 'string', 'children': [], 'value': "'shape_id'"}; {'id': '22', 'type': 'identifier', 'children': [], 'value': 'drop_duplicates'}; {'id': '23', 'type': 'argument_list', 'children': []}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'copy'}; {'id': '25', 'type': 'argument_list', 'children': []}; {'id': '26', 'type': 'expression_statement', 'children': ['27']}; {'id': '27', 'type': 'assignment', 'children': ['28', '31']}; {'id': '28', 'type': 'subscript', 'children': ['29', '30']}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'f'}; {'id': '30', 'type': 'string', 'children': [], 'value': "'route_id'"}; {'id': '31', 'type': 'binary_operator', 'children': ['32', '33'], 'value': '+'}; {'id': '32', 'type': 'string', 'children': [], 'value': "'r'"}; {'id': '33', 'type': 'call', 'children': ['34', '39']}; {'id': '34', 'type': 'attribute', 'children': ['35', '38']}; {'id': '35', 'type': 'subscript', 'children': ['36', '37']}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'f'}; {'id': '37', 'type': 'string', 'children': [], 'value': "'route_short_name'"}; {'id': '38', 'type': 'identifier', 'children': [], 'value': 'map'}; {'id': '39', 'type': 'argument_list', 'children': ['40']}; {'id': '40', 'type': 'identifier', 'children': [], 'value': 'str'}; {'id': '41', 'type': 'delete_statement', 'children': ['42']}; {'id': '42', 'type': 'subscript', 'children': ['43', '44']}; {'id': '43', 'type': 'identifier', 'children': [], 'value': 'f'}; {'id': '44', 'type': 'string', 'children': [], 'value': "'shape_id'"}; {'id': '45', 'type': 'return_statement', 'children': ['46']}; {'id': '46', 'type': 'identifier', 'children': [], 'value': 'f'} | Given a ProtoFeed, return a DataFrame representing ``routes.txt``. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'transitive_reduction'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'block', 'children': ['6', '10', '32', '90', '112']}; {'id': '6', 'type': 'expression_statement', 'children': ['7']}; {'id': '7', 'type': 'assignment', 'children': ['8', '9']}; {'id': '8', 'type': 'identifier', 'children': [], 'value': 'combinations'}; {'id': '9', 'type': 'list', 'children': [], 'value': '[]'}; {'id': '10', 'type': 'for_statement', 'children': ['11', '14', '21']}; {'id': '11', 'type': 'pattern_list', 'children': ['12', '13']}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'node'}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'edges'}; {'id': '14', 'type': 'call', 'children': ['15', '20']}; {'id': '15', 'type': 'attribute', 'children': ['16', '19']}; {'id': '16', 'type': 'attribute', 'children': ['17', '18']}; {'id': '17', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '18', 'type': 'identifier', 'children': [], 'value': 'graph'}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'items'}; {'id': '20', 'type': 'argument_list', 'children': []}; {'id': '21', 'type': 'block', 'children': ['22']}; {'id': '22', 'type': 'expression_statement', 'children': ['23']}; {'id': '23', 'type': 'augmented_assignment', 'children': ['24', '25'], 'value': '+='}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'combinations'}; {'id': '25', 'type': 'list_comprehension', 'children': ['26', '29']}; {'id': '26', 'type': 'list', 'children': ['27', '28'], 'value': '[node, edge]'}; {'id': '27', 'type': 'identifier', 'children': [], 'value': 'node'}; {'id': '28', 'type': 'identifier', 'children': [], 'value': 'edge'}; {'id': '29', 'type': 'for_in_clause', 'children': ['30', '31']}; {'id': '30', 'type': 'identifier', 'children': [], 'value': 'edge'}; {'id': '31', 'type': 'identifier', 'children': [], 'value': 'edges'}; {'id': '32', 'type': 'while_statement', 'children': ['33', '34']}; {'id': '33', 'type': 'True', 'children': []}; {'id': '34', 'type': 'block', 'children': ['35', '39', '81', '86']}; {'id': '35', 'type': 'expression_statement', 'children': ['36']}; {'id': '36', 'type': 'assignment', 'children': ['37', '38']}; {'id': '37', 'type': 'identifier', 'children': [], 'value': 'new_combinations'}; {'id': '38', 'type': 'list', 'children': [], 'value': '[]'}; {'id': '39', 'type': 'for_statement', 'children': ['40', '41', '42']}; {'id': '40', 'type': 'identifier', 'children': [], 'value': 'comb1'}; {'id': '41', 'type': 'identifier', 'children': [], 'value': 'combinations'}; {'id': '42', 'type': 'block', 'children': ['43']}; {'id': '43', 'type': 'for_statement', 'children': ['44', '45', '46']}; {'id': '44', 'type': 'identifier', 'children': [], 'value': 'comb2'}; {'id': '45', 'type': 'identifier', 'children': [], 'value': 'combinations'}; {'id': '46', 'type': 'block', 'children': ['47', '59', '69']}; {'id': '47', 'type': 'if_statement', 'children': ['48', '57']}; {'id': '48', 'type': 'not_operator', 'children': ['49']}; {'id': '49', 'type': 'comparison_operator', 'children': ['50', '54'], 'value': '=='}; {'id': '50', 'type': 'subscript', 'children': ['51', '52']}; {'id': '51', 'type': 'identifier', 'children': [], 'value': 'comb1'}; {'id': '52', 'type': 'unary_operator', 'children': ['53'], 'value': '-'}; {'id': '53', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '54', 'type': 'subscript', 'children': ['55', '56']}; {'id': '55', 'type': 'identifier', 'children': [], 'value': 'comb2'}; {'id': '56', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '57', 'type': 'block', 'children': ['58']}; {'id': '58', 'type': 'continue_statement', 'children': []}; {'id': '59', 'type': 'expression_statement', 'children': ['60']}; {'id': '60', 'type': 'assignment', 'children': ['61', '62']}; {'id': '61', 'type': 'identifier', 'children': [], 'value': 'new_entry'}; {'id': '62', 'type': 'binary_operator', 'children': ['63', '64'], 'value': '+'}; {'id': '63', 'type': 'identifier', 'children': [], 'value': 'comb1'}; {'id': '64', 'type': 'subscript', 'children': ['65', '66']}; {'id': '65', 'type': 'identifier', 'children': [], 'value': 'comb2'}; {'id': '66', 'type': 'slice', 'children': ['67', '68']}; {'id': '67', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '68', 'type': 'colon', 'children': []}; {'id': '69', 'type': 'if_statement', 'children': ['70', '73']}; {'id': '70', 'type': 'comparison_operator', 'children': ['71', '72'], 'value': 'not in'}; {'id': '71', 'type': 'identifier', 'children': [], 'value': 'new_entry'}; {'id': '72', 'type': 'identifier', 'children': [], 'value': 'combinations'}; {'id': '73', 'type': 'block', 'children': ['74']}; {'id': '74', 'type': 'expression_statement', 'children': ['75']}; {'id': '75', 'type': 'call', 'children': ['76', '79']}; {'id': '76', 'type': 'attribute', 'children': ['77', '78']}; {'id': '77', 'type': 'identifier', 'children': [], 'value': 'new_combinations'}; {'id': '78', 'type': 'identifier', 'children': [], 'value': 'append'}; {'id': '79', 'type': 'argument_list', 'children': ['80']}; {'id': '80', 'type': 'identifier', 'children': [], 'value': 'new_entry'}; {'id': '81', 'type': 'if_statement', 'children': ['82', '84']}; {'id': '82', 'type': 'not_operator', 'children': ['83']}; {'id': '83', 'type': 'identifier', 'children': [], 'value': 'new_combinations'}; {'id': '84', 'type': 'block', 'children': ['85']}; {'id': '85', 'type': 'break_statement', 'children': []}; {'id': '86', 'type': 'expression_statement', 'children': ['87']}; {'id': '87', 'type': 'augmented_assignment', 'children': ['88', '89'], 'value': '+='}; {'id': '88', 'type': 'identifier', 'children': [], 'value': 'combinations'}; {'id': '89', 'type': 'identifier', 'children': [], 'value': 'new_combinations'}; {'id': '90', 'type': 'expression_statement', 'children': ['91']}; {'id': '91', 'type': 'assignment', 'children': ['92', '93']}; {'id': '92', 'type': 'identifier', 'children': [], 'value': 'constructed'}; {'id': '93', 'type': 'set_comprehension', 'children': ['94', '102', '105']}; {'id': '94', 'type': 'tuple', 'children': ['95', '98']}; {'id': '95', 'type': 'subscript', 'children': ['96', '97']}; {'id': '96', 'type': 'identifier', 'children': [], 'value': 'c'}; {'id': '97', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '98', 'type': 'subscript', 'children': ['99', '100']}; {'id': '99', 'type': 'identifier', 'children': [], 'value': 'c'}; {'id': '100', 'type': 'unary_operator', 'children': ['101'], 'value': '-'}; {'id': '101', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '102', 'type': 'for_in_clause', 'children': ['103', '104']}; {'id': '103', 'type': 'identifier', 'children': [], 'value': 'c'}; {'id': '104', 'type': 'identifier', 'children': [], 'value': 'combinations'}; {'id': '105', 'type': 'if_clause', 'children': ['106']}; {'id': '106', 'type': 'comparison_operator', 'children': ['107', '111'], 'value': '!='}; {'id': '107', 'type': 'call', 'children': ['108', '109']}; {'id': '108', 'type': 'identifier', 'children': [], 'value': 'len'}; {'id': '109', 'type': 'argument_list', 'children': ['110']}; {'id': '110', 'type': 'identifier', 'children': [], 'value': 'c'}; {'id': '111', 'type': 'integer', 'children': [], 'value': '2'}; {'id': '112', 'type': 'for_statement', 'children': ['113', '116', '123']}; {'id': '113', 'type': 'pattern_list', 'children': ['114', '115']}; {'id': '114', 'type': 'identifier', 'children': [], 'value': 'node'}; {'id': '115', 'type': 'identifier', 'children': [], 'value': 'edges'}; {'id': '116', 'type': 'call', 'children': ['117', '122']}; {'id': '117', 'type': 'attribute', 'children': ['118', '121']}; {'id': '118', 'type': 'attribute', 'children': ['119', '120']}; {'id': '119', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '120', 'type': 'identifier', 'children': [], 'value': 'graph'}; {'id': '121', 'type': 'identifier', 'children': [], 'value': 'items'}; {'id': '122', 'type': 'argument_list', 'children': []}; {'id': '123', 'type': 'block', 'children': ['124', '138']}; {'id': '124', 'type': 'expression_statement', 'children': ['125']}; {'id': '125', 'type': 'assignment', 'children': ['126', '127']}; {'id': '126', 'type': 'identifier', 'children': [], 'value': 'bad_nodes'}; {'id': '127', 'type': 'set_comprehension', 'children': ['128', '129', '134']}; {'id': '128', 'type': 'identifier', 'children': [], 'value': 'e'}; {'id': '129', 'type': 'for_in_clause', 'children': ['130', '133']}; {'id': '130', 'type': 'pattern_list', 'children': ['131', '132']}; {'id': '131', 'type': 'identifier', 'children': [], 'value': 'n'}; {'id': '132', 'type': 'identifier', 'children': [], 'value': 'e'}; {'id': '133', 'type': 'identifier', 'children': [], 'value': 'constructed'}; {'id': '134', 'type': 'if_clause', 'children': ['135']}; {'id': '135', 'type': 'comparison_operator', 'children': ['136', '137'], 'value': '=='}; {'id': '136', 'type': 'identifier', 'children': [], 'value': 'node'}; {'id': '137', 'type': 'identifier', 'children': [], 'value': 'n'}; {'id': '138', 'type': 'expression_statement', 'children': ['139']}; {'id': '139', 'type': 'assignment', 'children': ['140', '145']}; {'id': '140', 'type': 'subscript', 'children': ['141', '144']}; {'id': '141', 'type': 'attribute', 'children': ['142', '143']}; {'id': '142', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '143', 'type': 'identifier', 'children': [], 'value': 'graph'}; {'id': '144', 'type': 'identifier', 'children': [], 'value': 'node'}; {'id': '145', 'type': 'binary_operator', 'children': ['146', '147'], 'value': '-'}; {'id': '146', 'type': 'identifier', 'children': [], 'value': 'edges'}; {'id': '147', 'type': 'identifier', 'children': [], 'value': 'bad_nodes'} | Performs a transitive reduction on the DAG. The transitive
reduction of a graph is a graph with as few edges as possible with the
same reachability as the original graph.
See https://en.wikipedia.org/wiki/Transitive_reduction |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'arity_evaluation_checker'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'function'}; {'id': '5', 'type': 'block', 'children': ['6', '15', '24', '33', '39', '50', '154']}; {'id': '6', 'type': 'expression_statement', 'children': ['7']}; {'id': '7', 'type': 'assignment', 'children': ['8', '9']}; {'id': '8', 'type': 'identifier', 'children': [], 'value': 'is_class'}; {'id': '9', 'type': 'call', 'children': ['10', '13']}; {'id': '10', 'type': 'attribute', 'children': ['11', '12']}; {'id': '11', 'type': 'identifier', 'children': [], 'value': 'inspect'}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'isclass'}; {'id': '13', 'type': 'argument_list', 'children': ['14']}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'function'}; {'id': '15', 'type': 'if_statement', 'children': ['16', '17']}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'is_class'}; {'id': '17', 'type': 'block', 'children': ['18']}; {'id': '18', 'type': 'expression_statement', 'children': ['19']}; {'id': '19', 'type': 'assignment', 'children': ['20', '21']}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'function'}; {'id': '21', 'type': 'attribute', 'children': ['22', '23']}; {'id': '22', 'type': 'identifier', 'children': [], 'value': 'function'}; {'id': '23', 'type': 'identifier', 'children': [], 'value': '__init__'}; {'id': '24', 'type': 'expression_statement', 'children': ['25']}; {'id': '25', 'type': 'assignment', 'children': ['26', '27']}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'function_info'}; {'id': '27', 'type': 'call', 'children': ['28', '31']}; {'id': '28', 'type': 'attribute', 'children': ['29', '30']}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'inspect'}; {'id': '30', 'type': 'identifier', 'children': [], 'value': 'getargspec'}; {'id': '31', 'type': 'argument_list', 'children': ['32']}; {'id': '32', 'type': 'identifier', 'children': [], 'value': 'function'}; {'id': '33', 'type': 'expression_statement', 'children': ['34']}; {'id': '34', 'type': 'assignment', 'children': ['35', '36']}; {'id': '35', 'type': 'identifier', 'children': [], 'value': 'function_args'}; {'id': '36', 'type': 'attribute', 'children': ['37', '38']}; {'id': '37', 'type': 'identifier', 'children': [], 'value': 'function_info'}; {'id': '38', 'type': 'identifier', 'children': [], 'value': 'args'}; {'id': '39', 'type': 'if_statement', 'children': ['40', '41']}; {'id': '40', 'type': 'identifier', 'children': [], 'value': 'is_class'}; {'id': '41', 'type': 'block', 'children': ['42']}; {'id': '42', 'type': 'expression_statement', 'children': ['43']}; {'id': '43', 'type': 'assignment', 'children': ['44', '45']}; {'id': '44', 'type': 'identifier', 'children': [], 'value': 'function_args'}; {'id': '45', 'type': 'subscript', 'children': ['46', '47']}; {'id': '46', 'type': 'identifier', 'children': [], 'value': 'function_args'}; {'id': '47', 'type': 'slice', 'children': ['48', '49']}; {'id': '48', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '49', 'type': 'colon', 'children': []}; {'id': '50', 'type': 'function_definition', 'children': ['51', '52', '57']}; {'id': '51', 'type': 'function_name', 'children': [], 'value': 'evaluation_checker'}; {'id': '52', 'type': 'parameters', 'children': ['53', '55']}; {'id': '53', 'type': 'list_splat_pattern', 'children': ['54']}; {'id': '54', 'type': 'identifier', 'children': [], 'value': 'args'}; {'id': '55', 'type': 'dictionary_splat_pattern', 'children': ['56']}; {'id': '56', 'type': 'identifier', 'children': [], 'value': 'kwargs'}; {'id': '57', 'type': 'block', 'children': ['58', '69', '114', '125', '144']}; {'id': '58', 'type': 'expression_statement', 'children': ['59']}; {'id': '59', 'type': 'assignment', 'children': ['60', '61']}; {'id': '60', 'type': 'identifier', 'children': [], 'value': 'kwarg_keys'}; {'id': '61', 'type': 'call', 'children': ['62', '63']}; {'id': '62', 'type': 'identifier', 'children': [], 'value': 'set'}; {'id': '63', 'type': 'argument_list', 'children': ['64']}; {'id': '64', 'type': 'call', 'children': ['65', '68']}; {'id': '65', 'type': 'attribute', 'children': ['66', '67']}; {'id': '66', 'type': 'identifier', 'children': [], 'value': 'kwargs'}; {'id': '67', 'type': 'identifier', 'children': [], 'value': 'keys'}; {'id': '68', 'type': 'argument_list', 'children': []}; {'id': '69', 'type': 'if_statement', 'children': ['70', '75']}; {'id': '70', 'type': 'comparison_operator', 'children': ['71', '74'], 'value': 'is'}; {'id': '71', 'type': 'attribute', 'children': ['72', '73']}; {'id': '72', 'type': 'identifier', 'children': [], 'value': 'function_info'}; {'id': '73', 'type': 'identifier', 'children': [], 'value': 'keywords'}; {'id': '74', 'type': 'None', 'children': []}; {'id': '75', 'type': 'block', 'children': ['76', '87']}; {'id': '76', 'type': 'expression_statement', 'children': ['77']}; {'id': '77', 'type': 'assignment', 'children': ['78', '79']}; {'id': '78', 'type': 'identifier', 'children': [], 'value': 'acceptable_kwargs'}; {'id': '79', 'type': 'subscript', 'children': ['80', '81']}; {'id': '80', 'type': 'identifier', 'children': [], 'value': 'function_args'}; {'id': '81', 'type': 'slice', 'children': ['82', '86']}; {'id': '82', 'type': 'call', 'children': ['83', '84']}; {'id': '83', 'type': 'identifier', 'children': [], 'value': 'len'}; {'id': '84', 'type': 'argument_list', 'children': ['85']}; {'id': '85', 'type': 'identifier', 'children': [], 'value': 'args'}; {'id': '86', 'type': 'colon', 'children': []}; {'id': '87', 'type': 'if_statement', 'children': ['88', '95']}; {'id': '88', 'type': 'not_operator', 'children': ['89']}; {'id': '89', 'type': 'call', 'children': ['90', '93']}; {'id': '90', 'type': 'attribute', 'children': ['91', '92']}; {'id': '91', 'type': 'identifier', 'children': [], 'value': 'kwarg_keys'}; {'id': '92', 'type': 'identifier', 'children': [], 'value': 'issubset'}; {'id': '93', 'type': 'argument_list', 'children': ['94']}; {'id': '94', 'type': 'identifier', 'children': [], 'value': 'acceptable_kwargs'}; {'id': '95', 'type': 'block', 'children': ['96']}; {'id': '96', 'type': 'expression_statement', 'children': ['97']}; {'id': '97', 'type': 'call', 'children': ['98', '99']}; {'id': '98', 'type': 'identifier', 'children': [], 'value': 'TypeError'}; {'id': '99', 'type': 'argument_list', 'children': ['100']}; {'id': '100', 'type': 'call', 'children': ['101', '104']}; {'id': '101', 'type': 'attribute', 'children': ['102', '103']}; {'id': '102', 'type': 'string', 'children': [], 'value': '"Unrecognized Arguments: {0}"'}; {'id': '103', 'type': 'identifier', 'children': [], 'value': 'format'}; {'id': '104', 'type': 'argument_list', 'children': ['105']}; {'id': '105', 'type': 'list_comprehension', 'children': ['106', '107', '110']}; {'id': '106', 'type': 'identifier', 'children': [], 'value': 'key'}; {'id': '107', 'type': 'for_in_clause', 'children': ['108', '109']}; {'id': '108', 'type': 'identifier', 'children': [], 'value': 'key'}; {'id': '109', 'type': 'identifier', 'children': [], 'value': 'kwarg_keys'}; {'id': '110', 'type': 'if_clause', 'children': ['111']}; {'id': '111', 'type': 'comparison_operator', 'children': ['112', '113'], 'value': 'not in'}; {'id': '112', 'type': 'identifier', 'children': [], 'value': 'key'}; {'id': '113', 'type': 'identifier', 'children': [], 'value': 'acceptable_kwargs'}; {'id': '114', 'type': 'expression_statement', 'children': ['115']}; {'id': '115', 'type': 'assignment', 'children': ['116', '117']}; {'id': '116', 'type': 'identifier', 'children': [], 'value': 'needed_args'}; {'id': '117', 'type': 'subscript', 'children': ['118', '119']}; {'id': '118', 'type': 'identifier', 'children': [], 'value': 'function_args'}; {'id': '119', 'type': 'slice', 'children': ['120', '124']}; {'id': '120', 'type': 'call', 'children': ['121', '122']}; {'id': '121', 'type': 'identifier', 'children': [], 'value': 'len'}; {'id': '122', 'type': 'argument_list', 'children': ['123']}; {'id': '123', 'type': 'identifier', 'children': [], 'value': 'args'}; {'id': '124', 'type': 'colon', 'children': []}; {'id': '125', 'type': 'if_statement', 'children': ['126', '129']}; {'id': '126', 'type': 'attribute', 'children': ['127', '128']}; {'id': '127', 'type': 'identifier', 'children': [], 'value': 'function_info'}; {'id': '128', 'type': 'identifier', 'children': [], 'value': 'defaults'}; {'id': '129', 'type': 'block', 'children': ['130']}; {'id': '130', 'type': 'expression_statement', 'children': ['131']}; {'id': '131', 'type': 'assignment', 'children': ['132', '133']}; {'id': '132', 'type': 'identifier', 'children': [], 'value': 'needed_args'}; {'id': '133', 'type': 'subscript', 'children': ['134', '135']}; {'id': '134', 'type': 'identifier', 'children': [], 'value': 'needed_args'}; {'id': '135', 'type': 'slice', 'children': ['136', '137']}; {'id': '136', 'type': 'colon', 'children': []}; {'id': '137', 'type': 'unary_operator', 'children': ['138'], 'value': '-'}; {'id': '138', 'type': 'call', 'children': ['139', '140']}; {'id': '139', 'type': 'identifier', 'children': [], 'value': 'len'}; {'id': '140', 'type': 'argument_list', 'children': ['141']}; {'id': '141', 'type': 'attribute', 'children': ['142', '143']}; {'id': '142', 'type': 'identifier', 'children': [], 'value': 'function_info'}; {'id': '143', 'type': 'identifier', 'children': [], 'value': 'defaults'}; {'id': '144', 'type': 'return_statement', 'children': ['145']}; {'id': '145', 'type': 'boolean_operator', 'children': ['146', '148'], 'value': 'or'}; {'id': '146', 'type': 'not_operator', 'children': ['147']}; {'id': '147', 'type': 'identifier', 'children': [], 'value': 'needed_args'}; {'id': '148', 'type': 'call', 'children': ['149', '152']}; {'id': '149', 'type': 'attribute', 'children': ['150', '151']}; {'id': '150', 'type': 'identifier', 'children': [], 'value': 'kwarg_keys'}; {'id': '151', 'type': 'identifier', 'children': [], 'value': 'issuperset'}; {'id': '152', 'type': 'argument_list', 'children': ['153']}; {'id': '153', 'type': 'identifier', 'children': [], 'value': 'needed_args'}; {'id': '154', 'type': 'return_statement', 'children': ['155']}; {'id': '155', 'type': 'identifier', 'children': [], 'value': 'evaluation_checker'} | Build an evaluation checker that will return True when it is
guaranteed that all positional arguments have been accounted for. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '7']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'update_config_value'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'config_m'}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'config_key'}; {'id': '7', 'type': 'block', 'children': ['8', '17', '46']}; {'id': '8', 'type': 'expression_statement', 'children': ['9']}; {'id': '9', 'type': 'assignment', 'children': ['10', '11']}; {'id': '10', 'type': 'identifier', 'children': [], 'value': 'config_value'}; {'id': '11', 'type': 'call', 'children': ['12', '15']}; {'id': '12', 'type': 'attribute', 'children': ['13', '14']}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'config_m'}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'get_current_config_value'}; {'id': '15', 'type': 'argument_list', 'children': ['16']}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'config_key'}; {'id': '17', 'type': 'if_statement', 'children': ['18', '23', '30', '43']}; {'id': '18', 'type': 'comparison_operator', 'children': ['19', '20'], 'value': 'is'}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'config_m'}; {'id': '20', 'type': 'attribute', 'children': ['21', '22']}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '22', 'type': 'identifier', 'children': [], 'value': 'core_config_model'}; {'id': '23', 'type': 'block', 'children': ['24']}; {'id': '24', 'type': 'expression_statement', 'children': ['25']}; {'id': '25', 'type': 'assignment', 'children': ['26', '27']}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'list_store'}; {'id': '27', 'type': 'attribute', 'children': ['28', '29']}; {'id': '28', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'core_list_store'}; {'id': '30', 'type': 'elif_clause', 'children': ['31', '36']}; {'id': '31', 'type': 'comparison_operator', 'children': ['32', '33'], 'value': 'is'}; {'id': '32', 'type': 'identifier', 'children': [], 'value': 'config_m'}; {'id': '33', 'type': 'attribute', 'children': ['34', '35']}; {'id': '34', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '35', 'type': 'identifier', 'children': [], 'value': 'gui_config_model'}; {'id': '36', 'type': 'block', 'children': ['37']}; {'id': '37', 'type': 'expression_statement', 'children': ['38']}; {'id': '38', 'type': 'assignment', 'children': ['39', '40']}; {'id': '39', 'type': 'identifier', 'children': [], 'value': 'list_store'}; {'id': '40', 'type': 'attribute', 'children': ['41', '42']}; {'id': '41', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '42', 'type': 'identifier', 'children': [], 'value': 'gui_list_store'}; {'id': '43', 'type': 'else_clause', 'children': ['44']}; {'id': '44', 'type': 'block', 'children': ['45']}; {'id': '45', 'type': 'return_statement', 'children': []}; {'id': '46', 'type': 'expression_statement', 'children': ['47']}; {'id': '47', 'type': 'call', 'children': ['48', '51']}; {'id': '48', 'type': 'attribute', 'children': ['49', '50']}; {'id': '49', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '50', 'type': 'identifier', 'children': [], 'value': '_update_list_store_entry'}; {'id': '51', 'type': 'argument_list', 'children': ['52', '53', '54']}; {'id': '52', 'type': 'identifier', 'children': [], 'value': 'list_store'}; {'id': '53', 'type': 'identifier', 'children': [], 'value': 'config_key'}; {'id': '54', 'type': 'identifier', 'children': [], 'value': 'config_value'} | Updates the corresponding list store of a changed config value
:param ConfigModel config_m: The config model that has been changed
:param str config_key: The config key who's value has been changed |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '12']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'verify_param'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6', '9']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'param'}; {'id': '6', 'type': 'default_parameter', 'children': ['7', '8']}; {'id': '7', 'type': 'identifier', 'children': [], 'value': 'must'}; {'id': '8', 'type': 'list', 'children': [], 'value': '[]'}; {'id': '9', 'type': 'default_parameter', 'children': ['10', '11']}; {'id': '10', 'type': 'identifier', 'children': [], 'value': 'r'}; {'id': '11', 'type': 'None', 'children': []}; {'id': '12', 'type': 'block', 'children': ['13', '28', '39', '65']}; {'id': '13', 'type': 'if_statement', 'children': ['14', '17']}; {'id': '14', 'type': 'comparison_operator', 'children': ['15', '16'], 'value': 'not in'}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'APIKEY'}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'param'}; {'id': '17', 'type': 'block', 'children': ['18']}; {'id': '18', 'type': 'expression_statement', 'children': ['19']}; {'id': '19', 'type': 'assignment', 'children': ['20', '23']}; {'id': '20', 'type': 'subscript', 'children': ['21', '22']}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'param'}; {'id': '22', 'type': 'identifier', 'children': [], 'value': 'APIKEY'}; {'id': '23', 'type': 'call', 'children': ['24', '27']}; {'id': '24', 'type': 'attribute', 'children': ['25', '26']}; {'id': '25', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'apikey'}; {'id': '27', 'type': 'argument_list', 'children': []}; {'id': '28', 'type': 'expression_statement', 'children': ['29']}; {'id': '29', 'type': 'assignment', 'children': ['30', '31']}; {'id': '30', 'type': 'identifier', 'children': [], 'value': 'r'}; {'id': '31', 'type': 'conditional_expression', 'children': ['32', '35', '38'], 'value': 'if'}; {'id': '32', 'type': 'call', 'children': ['33', '34']}; {'id': '33', 'type': 'identifier', 'children': [], 'value': 'Result'}; {'id': '34', 'type': 'argument_list', 'children': []}; {'id': '35', 'type': 'comparison_operator', 'children': ['36', '37'], 'value': 'is'}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'r'}; {'id': '37', 'type': 'None', 'children': []}; {'id': '38', 'type': 'identifier', 'children': [], 'value': 'r'}; {'id': '39', 'type': 'for_statement', 'children': ['40', '41', '42']}; {'id': '40', 'type': 'identifier', 'children': [], 'value': 'p'}; {'id': '41', 'type': 'identifier', 'children': [], 'value': 'must'}; {'id': '42', 'type': 'block', 'children': ['43']}; {'id': '43', 'type': 'if_statement', 'children': ['44', '47']}; {'id': '44', 'type': 'comparison_operator', 'children': ['45', '46'], 'value': 'not in'}; {'id': '45', 'type': 'identifier', 'children': [], 'value': 'p'}; {'id': '46', 'type': 'identifier', 'children': [], 'value': 'param'}; {'id': '47', 'type': 'block', 'children': ['48', '64']}; {'id': '48', 'type': 'expression_statement', 'children': ['49']}; {'id': '49', 'type': 'call', 'children': ['50', '60']}; {'id': '50', 'type': 'attribute', 'children': ['51', '59']}; {'id': '51', 'type': 'call', 'children': ['52', '55']}; {'id': '52', 'type': 'attribute', 'children': ['53', '54']}; {'id': '53', 'type': 'identifier', 'children': [], 'value': 'r'}; {'id': '54', 'type': 'identifier', 'children': [], 'value': 'code'}; {'id': '55', 'type': 'argument_list', 'children': ['56']}; {'id': '56', 'type': 'attribute', 'children': ['57', '58']}; {'id': '57', 'type': 'identifier', 'children': [], 'value': 'Code'}; {'id': '58', 'type': 'identifier', 'children': [], 'value': 'ARGUMENT_MISSING'}; {'id': '59', 'type': 'identifier', 'children': [], 'value': 'detail'}; {'id': '60', 'type': 'argument_list', 'children': ['61']}; {'id': '61', 'type': 'binary_operator', 'children': ['62', '63'], 'value': '+'}; {'id': '62', 'type': 'string', 'children': [], 'value': "'missing-'"}; {'id': '63', 'type': 'identifier', 'children': [], 'value': 'p'}; {'id': '64', 'type': 'break_statement', 'children': []}; {'id': '65', 'type': 'return_statement', 'children': ['66']}; {'id': '66', 'type': 'identifier', 'children': [], 'value': 'r'} | return Code.ARGUMENT_MISSING if every key in must not found in param |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '12']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'write_csvs'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6', '9']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'asset_map'}; {'id': '6', 'type': 'default_parameter', 'children': ['7', '8']}; {'id': '7', 'type': 'identifier', 'children': [], 'value': 'show_progress'}; {'id': '8', 'type': 'False', 'children': []}; {'id': '9', 'type': 'default_parameter', 'children': ['10', '11']}; {'id': '10', 'type': 'identifier', 'children': [], 'value': 'invalid_data_behavior'}; {'id': '11', 'type': 'string', 'children': [], 'value': "'warn'"}; {'id': '12', 'type': 'block', 'children': ['13', '32']}; {'id': '13', 'type': 'expression_statement', 'children': ['14']}; {'id': '14', 'type': 'assignment', 'children': ['15', '16']}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'read'}; {'id': '16', 'type': 'call', 'children': ['17', '18']}; {'id': '17', 'type': 'identifier', 'children': [], 'value': 'partial'}; {'id': '18', 'type': 'argument_list', 'children': ['19', '20', '24', '27']}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'read_csv'}; {'id': '20', 'type': 'keyword_argument', 'children': ['21', '22']}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'parse_dates'}; {'id': '22', 'type': 'list', 'children': ['23'], 'value': "['day']"}; {'id': '23', 'type': 'string', 'children': [], 'value': "'day'"}; {'id': '24', 'type': 'keyword_argument', 'children': ['25', '26']}; {'id': '25', 'type': 'identifier', 'children': [], 'value': 'index_col'}; {'id': '26', 'type': 'string', 'children': [], 'value': "'day'"}; {'id': '27', 'type': 'keyword_argument', 'children': ['28', '29']}; {'id': '28', 'type': 'identifier', 'children': [], 'value': 'dtype'}; {'id': '29', 'type': 'attribute', 'children': ['30', '31']}; {'id': '30', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '31', 'type': 'identifier', 'children': [], 'value': '_csv_dtypes'}; {'id': '32', 'type': 'return_statement', 'children': ['33']}; {'id': '33', 'type': 'call', 'children': ['34', '37']}; {'id': '34', 'type': 'attribute', 'children': ['35', '36']}; {'id': '35', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'write'}; {'id': '37', 'type': 'argument_list', 'children': ['38', '53', '59', '62']}; {'id': '38', 'type': 'generator_expression', 'children': ['39', '45']}; {'id': '39', 'type': 'tuple', 'children': ['40', '41']}; {'id': '40', 'type': 'identifier', 'children': [], 'value': 'asset'}; {'id': '41', 'type': 'call', 'children': ['42', '43']}; {'id': '42', 'type': 'identifier', 'children': [], 'value': 'read'}; {'id': '43', 'type': 'argument_list', 'children': ['44']}; {'id': '44', 'type': 'identifier', 'children': [], 'value': 'path'}; {'id': '45', 'type': 'for_in_clause', 'children': ['46', '49']}; {'id': '46', 'type': 'pattern_list', 'children': ['47', '48']}; {'id': '47', 'type': 'identifier', 'children': [], 'value': 'asset'}; {'id': '48', 'type': 'identifier', 'children': [], 'value': 'path'}; {'id': '49', 'type': 'call', 'children': ['50', '51']}; {'id': '50', 'type': 'identifier', 'children': [], 'value': 'iteritems'}; {'id': '51', 'type': 'argument_list', 'children': ['52']}; {'id': '52', 'type': 'identifier', 'children': [], 'value': 'asset_map'}; {'id': '53', 'type': 'keyword_argument', 'children': ['54', '55']}; {'id': '54', 'type': 'identifier', 'children': [], 'value': 'assets'}; {'id': '55', 'type': 'call', 'children': ['56', '57']}; {'id': '56', 'type': 'identifier', 'children': [], 'value': 'viewkeys'}; {'id': '57', 'type': 'argument_list', 'children': ['58']}; {'id': '58', 'type': 'identifier', 'children': [], 'value': 'asset_map'}; {'id': '59', 'type': 'keyword_argument', 'children': ['60', '61']}; {'id': '60', 'type': 'identifier', 'children': [], 'value': 'show_progress'}; {'id': '61', 'type': 'identifier', 'children': [], 'value': 'show_progress'}; {'id': '62', 'type': 'keyword_argument', 'children': ['63', '64']}; {'id': '63', 'type': 'identifier', 'children': [], 'value': 'invalid_data_behavior'}; {'id': '64', 'type': 'identifier', 'children': [], 'value': 'invalid_data_behavior'} | Read CSVs as DataFrames from our asset map.
Parameters
----------
asset_map : dict[int -> str]
A mapping from asset id to file path with the CSV data for that
asset
show_progress : bool
Whether or not to show a progress bar while writing.
invalid_data_behavior : {'warn', 'raise', 'ignore'}
What to do when data is encountered that is outside the range of
a uint32. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'decrypt'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'data'}; {'id': '6', 'type': 'block', 'children': ['7', '11', '62']}; {'id': '7', 'type': 'expression_statement', 'children': ['8']}; {'id': '8', 'type': 'assignment', 'children': ['9', '10']}; {'id': '9', 'type': 'identifier', 'children': [], 'value': 'decrypted_data'}; {'id': '10', 'type': 'string', 'children': [], 'value': 'b""'}; {'id': '11', 'type': 'for_statement', 'children': ['12', '13', '22']}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'i'}; {'id': '13', 'type': 'call', 'children': ['14', '15']}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'range'}; {'id': '15', 'type': 'argument_list', 'children': ['16', '17', '21']}; {'id': '16', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '17', 'type': 'call', 'children': ['18', '19']}; {'id': '18', 'type': 'identifier', 'children': [], 'value': 'len'}; {'id': '19', 'type': 'argument_list', 'children': ['20']}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'data'}; {'id': '21', 'type': 'integer', 'children': [], 'value': '8'}; {'id': '22', 'type': 'block', 'children': ['23', '34', '41', '53']}; {'id': '23', 'type': 'expression_statement', 'children': ['24']}; {'id': '24', 'type': 'assignment', 'children': ['25', '26']}; {'id': '25', 'type': 'identifier', 'children': [], 'value': 'block'}; {'id': '26', 'type': 'subscript', 'children': ['27', '28']}; {'id': '27', 'type': 'identifier', 'children': [], 'value': 'data'}; {'id': '28', 'type': 'slice', 'children': ['29', '30', '31']}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'i'}; {'id': '30', 'type': 'colon', 'children': []}; {'id': '31', 'type': 'binary_operator', 'children': ['32', '33'], 'value': '+'}; {'id': '32', 'type': 'identifier', 'children': [], 'value': 'i'}; {'id': '33', 'type': 'integer', 'children': [], 'value': '8'}; {'id': '34', 'type': 'expression_statement', 'children': ['35']}; {'id': '35', 'type': 'assignment', 'children': ['36', '37']}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'block_length'}; {'id': '37', 'type': 'call', 'children': ['38', '39']}; {'id': '38', 'type': 'identifier', 'children': [], 'value': 'len'}; {'id': '39', 'type': 'argument_list', 'children': ['40']}; {'id': '40', 'type': 'identifier', 'children': [], 'value': 'block'}; {'id': '41', 'type': 'if_statement', 'children': ['42', '45']}; {'id': '42', 'type': 'comparison_operator', 'children': ['43', '44'], 'value': '!='}; {'id': '43', 'type': 'identifier', 'children': [], 'value': 'block_length'}; {'id': '44', 'type': 'integer', 'children': [], 'value': '8'}; {'id': '45', 'type': 'block', 'children': ['46']}; {'id': '46', 'type': 'raise_statement', 'children': ['47']}; {'id': '47', 'type': 'call', 'children': ['48', '49']}; {'id': '48', 'type': 'identifier', 'children': [], 'value': 'ValueError'}; {'id': '49', 'type': 'argument_list', 'children': ['50']}; {'id': '50', 'type': 'concatenated_string', 'children': ['51', '52']}; {'id': '51', 'type': 'string', 'children': [], 'value': '"DES decryption must be a multiple of 8 "'}; {'id': '52', 'type': 'string', 'children': [], 'value': '"bytes"'}; {'id': '53', 'type': 'expression_statement', 'children': ['54']}; {'id': '54', 'type': 'augmented_assignment', 'children': ['55', '56'], 'value': '+='}; {'id': '55', 'type': 'identifier', 'children': [], 'value': 'decrypted_data'}; {'id': '56', 'type': 'call', 'children': ['57', '60']}; {'id': '57', 'type': 'attribute', 'children': ['58', '59']}; {'id': '58', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '59', 'type': 'identifier', 'children': [], 'value': '_decode_block'}; {'id': '60', 'type': 'argument_list', 'children': ['61']}; {'id': '61', 'type': 'identifier', 'children': [], 'value': 'block'}; {'id': '62', 'type': 'return_statement', 'children': ['63']}; {'id': '63', 'type': 'identifier', 'children': [], 'value': 'decrypted_data'} | DES decrypts the data based on the key it was initialised with.
:param data: The encrypted bytes string to decrypt
:return: The decrypted bytes string |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '8']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'db'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'cls'}; {'id': '5', 'type': 'default_parameter', 'children': ['6', '7']}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'path'}; {'id': '7', 'type': 'None', 'children': []}; {'id': '8', 'type': 'block', 'children': ['9', '25', '36', '52', '67', '79']}; {'id': '9', 'type': 'if_statement', 'children': ['10', '19']}; {'id': '10', 'type': 'boolean_operator', 'children': ['11', '16'], 'value': 'and'}; {'id': '11', 'type': 'comparison_operator', 'children': ['12', '15'], 'value': 'is'}; {'id': '12', 'type': 'attribute', 'children': ['13', '14']}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'cls'}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'PATH'}; {'id': '15', 'type': 'None', 'children': []}; {'id': '16', 'type': 'comparison_operator', 'children': ['17', '18'], 'value': 'is'}; {'id': '17', 'type': 'identifier', 'children': [], 'value': 'path'}; {'id': '18', 'type': 'None', 'children': []}; {'id': '19', 'type': 'block', 'children': ['20']}; {'id': '20', 'type': 'raise_statement', 'children': ['21']}; {'id': '21', 'type': 'call', 'children': ['22', '23']}; {'id': '22', 'type': 'identifier', 'children': [], 'value': 'Exception'}; {'id': '23', 'type': 'argument_list', 'children': ['24']}; {'id': '24', 'type': 'string', 'children': [], 'value': '"No database specified"'}; {'id': '25', 'type': 'if_statement', 'children': ['26', '29']}; {'id': '26', 'type': 'comparison_operator', 'children': ['27', '28'], 'value': 'is'}; {'id': '27', 'type': 'identifier', 'children': [], 'value': 'path'}; {'id': '28', 'type': 'None', 'children': []}; {'id': '29', 'type': 'block', 'children': ['30']}; {'id': '30', 'type': 'expression_statement', 'children': ['31']}; {'id': '31', 'type': 'assignment', 'children': ['32', '33']}; {'id': '32', 'type': 'identifier', 'children': [], 'value': 'path'}; {'id': '33', 'type': 'attribute', 'children': ['34', '35']}; {'id': '34', 'type': 'identifier', 'children': [], 'value': 'cls'}; {'id': '35', 'type': 'identifier', 'children': [], 'value': 'PATH'}; {'id': '36', 'type': 'if_statement', 'children': ['37', '40']}; {'id': '37', 'type': 'comparison_operator', 'children': ['38', '39'], 'value': 'not in'}; {'id': '38', 'type': 'string', 'children': [], 'value': '"."'}; {'id': '39', 'type': 'identifier', 'children': [], 'value': 'path'}; {'id': '40', 'type': 'block', 'children': ['41']}; {'id': '41', 'type': 'raise_statement', 'children': ['42']}; {'id': '42', 'type': 'call', 'children': ['43', '44']}; {'id': '43', 'type': 'identifier', 'children': [], 'value': 'Exception'}; {'id': '44', 'type': 'argument_list', 'children': ['45']}; {'id': '45', 'type': 'binary_operator', 'children': ['46', '50'], 'value': '%'}; {'id': '46', 'type': '()', 'children': ['47']}; {'id': '47', 'type': 'binary_operator', 'children': ['48', '49'], 'value': '+'}; {'id': '48', 'type': 'string', 'children': [], 'value': '\'invalid path "%s"; database paths must be \''}; {'id': '49', 'type': 'string', 'children': [], 'value': '\'of the form "database.collection"\''}; {'id': '50', 'type': 'tuple', 'children': ['51']}; {'id': '51', 'type': 'identifier', 'children': [], 'value': 'path'}; {'id': '52', 'type': 'if_statement', 'children': ['53', '56']}; {'id': '53', 'type': 'attribute', 'children': ['54', '55']}; {'id': '54', 'type': 'identifier', 'children': [], 'value': 'CONNECTION'}; {'id': '55', 'type': 'identifier', 'children': [], 'value': 'test_mode'}; {'id': '56', 'type': 'block', 'children': ['57']}; {'id': '57', 'type': 'return_statement', 'children': ['58']}; {'id': '58', 'type': 'subscript', 'children': ['59', '66']}; {'id': '59', 'type': 'subscript', 'children': ['60', '65']}; {'id': '60', 'type': 'call', 'children': ['61', '64']}; {'id': '61', 'type': 'attribute', 'children': ['62', '63']}; {'id': '62', 'type': 'identifier', 'children': [], 'value': 'CONNECTION'}; {'id': '63', 'type': 'identifier', 'children': [], 'value': 'get_connection'}; {'id': '64', 'type': 'argument_list', 'children': []}; {'id': '65', 'type': 'identifier', 'children': [], 'value': 'TEST_DATABASE_NAME'}; {'id': '66', 'type': 'identifier', 'children': [], 'value': 'path'}; {'id': '67', 'type': 'expression_statement', 'children': ['68']}; {'id': '68', 'type': 'assignment', 'children': ['69', '72']}; {'id': '69', 'type': 'tuple_pattern', 'children': ['70', '71']}; {'id': '70', 'type': 'identifier', 'children': [], 'value': 'db'}; {'id': '71', 'type': 'identifier', 'children': [], 'value': 'coll'}; {'id': '72', 'type': 'call', 'children': ['73', '76']}; {'id': '73', 'type': 'attribute', 'children': ['74', '75']}; {'id': '74', 'type': 'identifier', 'children': [], 'value': 'path'}; {'id': '75', 'type': 'identifier', 'children': [], 'value': 'split'}; {'id': '76', 'type': 'argument_list', 'children': ['77', '78']}; {'id': '77', 'type': 'string', 'children': [], 'value': "'.'"}; {'id': '78', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '79', 'type': 'return_statement', 'children': ['80']}; {'id': '80', 'type': 'subscript', 'children': ['81', '88']}; {'id': '81', 'type': 'subscript', 'children': ['82', '87']}; {'id': '82', 'type': 'call', 'children': ['83', '86']}; {'id': '83', 'type': 'attribute', 'children': ['84', '85']}; {'id': '84', 'type': 'identifier', 'children': [], 'value': 'CONNECTION'}; {'id': '85', 'type': 'identifier', 'children': [], 'value': 'get_connection'}; {'id': '86', 'type': 'argument_list', 'children': []}; {'id': '87', 'type': 'identifier', 'children': [], 'value': 'db'}; {'id': '88', 'type': 'identifier', 'children': [], 'value': 'coll'} | Returns a pymongo Collection object from the current database connection.
If the database connection is in test mode, collection will be in the
test database.
@param path: if is None, the PATH attribute of the current class is used;
if is not None, this is used instead
@raise Exception: if neither cls.PATH or path are valid |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '8']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'recalibrate_quality'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6', '7']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'bam_file'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'sam_ref'}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'dbsnp_file'}; {'id': '7', 'type': 'identifier', 'children': [], 'value': 'picard_dir'}; {'id': '8', 'type': 'block', 'children': ['9', '17', '27', '34', '56']}; {'id': '9', 'type': 'expression_statement', 'children': ['10']}; {'id': '10', 'type': 'assignment', 'children': ['11', '12']}; {'id': '11', 'type': 'identifier', 'children': [], 'value': 'cl'}; {'id': '12', 'type': 'list', 'children': ['13', '14', '15', '16'], 'value': '["picard_gatk_recalibrate.py", picard_dir, sam_ref, bam_file]'}; {'id': '13', 'type': 'string', 'children': [], 'value': '"picard_gatk_recalibrate.py"'}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'picard_dir'}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'sam_ref'}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'bam_file'}; {'id': '17', 'type': 'if_statement', 'children': ['18', '19']}; {'id': '18', 'type': 'identifier', 'children': [], 'value': 'dbsnp_file'}; {'id': '19', 'type': 'block', 'children': ['20']}; {'id': '20', 'type': 'expression_statement', 'children': ['21']}; {'id': '21', 'type': 'call', 'children': ['22', '25']}; {'id': '22', 'type': 'attribute', 'children': ['23', '24']}; {'id': '23', 'type': 'identifier', 'children': [], 'value': 'cl'}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'append'}; {'id': '25', 'type': 'argument_list', 'children': ['26']}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'dbsnp_file'}; {'id': '27', 'type': 'expression_statement', 'children': ['28']}; {'id': '28', 'type': 'call', 'children': ['29', '32']}; {'id': '29', 'type': 'attribute', 'children': ['30', '31']}; {'id': '30', 'type': 'identifier', 'children': [], 'value': 'subprocess'}; {'id': '31', 'type': 'identifier', 'children': [], 'value': 'check_call'}; {'id': '32', 'type': 'argument_list', 'children': ['33']}; {'id': '33', 'type': 'identifier', 'children': [], 'value': 'cl'}; {'id': '34', 'type': 'expression_statement', 'children': ['35']}; {'id': '35', 'type': 'assignment', 'children': ['36', '37']}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'out_file'}; {'id': '37', 'type': 'subscript', 'children': ['38', '55']}; {'id': '38', 'type': 'call', 'children': ['39', '42']}; {'id': '39', 'type': 'attribute', 'children': ['40', '41']}; {'id': '40', 'type': 'identifier', 'children': [], 'value': 'glob'}; {'id': '41', 'type': 'identifier', 'children': [], 'value': 'glob'}; {'id': '42', 'type': 'argument_list', 'children': ['43']}; {'id': '43', 'type': 'binary_operator', 'children': ['44', '45'], 'value': '%'}; {'id': '44', 'type': 'string', 'children': [], 'value': '"%s*gatkrecal.bam"'}; {'id': '45', 'type': 'subscript', 'children': ['46', '54']}; {'id': '46', 'type': 'call', 'children': ['47', '52']}; {'id': '47', 'type': 'attribute', 'children': ['48', '51']}; {'id': '48', 'type': 'attribute', 'children': ['49', '50']}; {'id': '49', 'type': 'identifier', 'children': [], 'value': 'os'}; {'id': '50', 'type': 'identifier', 'children': [], 'value': 'path'}; {'id': '51', 'type': 'identifier', 'children': [], 'value': 'splitext'}; {'id': '52', 'type': 'argument_list', 'children': ['53']}; {'id': '53', 'type': 'identifier', 'children': [], 'value': 'bam_file'}; {'id': '54', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '55', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '56', 'type': 'return_statement', 'children': ['57']}; {'id': '57', 'type': 'identifier', 'children': [], 'value': 'out_file'} | Recalibrate alignments with GATK and provide pdf summary. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '8']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'wait_for_task'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'upid'}; {'id': '5', 'type': 'default_parameter', 'children': ['6', '7']}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'timeout'}; {'id': '7', 'type': 'integer', 'children': [], 'value': '300'}; {'id': '8', 'type': 'block', 'children': ['9', '17', '24', '39']}; {'id': '9', 'type': 'expression_statement', 'children': ['10']}; {'id': '10', 'type': 'assignment', 'children': ['11', '12']}; {'id': '11', 'type': 'identifier', 'children': [], 'value': 'start_time'}; {'id': '12', 'type': 'call', 'children': ['13', '16']}; {'id': '13', 'type': 'attribute', 'children': ['14', '15']}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'time'}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'time'}; {'id': '16', 'type': 'argument_list', 'children': []}; {'id': '17', 'type': 'expression_statement', 'children': ['18']}; {'id': '18', 'type': 'assignment', 'children': ['19', '20']}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'info'}; {'id': '20', 'type': 'call', 'children': ['21', '22']}; {'id': '21', 'type': 'identifier', 'children': [], 'value': '_lookup_proxmox_task'}; {'id': '22', 'type': 'argument_list', 'children': ['23']}; {'id': '23', 'type': 'identifier', 'children': [], 'value': 'upid'}; {'id': '24', 'type': 'if_statement', 'children': ['25', '27']}; {'id': '25', 'type': 'not_operator', 'children': ['26']}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'info'}; {'id': '27', 'type': 'block', 'children': ['28', '37']}; {'id': '28', 'type': 'expression_statement', 'children': ['29']}; {'id': '29', 'type': 'call', 'children': ['30', '33']}; {'id': '30', 'type': 'attribute', 'children': ['31', '32']}; {'id': '31', 'type': 'identifier', 'children': [], 'value': 'log'}; {'id': '32', 'type': 'identifier', 'children': [], 'value': 'error'}; {'id': '33', 'type': 'argument_list', 'children': ['34']}; {'id': '34', 'type': 'concatenated_string', 'children': ['35', '36']}; {'id': '35', 'type': 'string', 'children': [], 'value': "'wait_for_task: No task information '"}; {'id': '36', 'type': 'string', 'children': [], 'value': "'retrieved based on given criteria.'"}; {'id': '37', 'type': 'raise_statement', 'children': ['38']}; {'id': '38', 'type': 'identifier', 'children': [], 'value': 'SaltCloudExecutionFailure'}; {'id': '39', 'type': 'while_statement', 'children': ['40', '41']}; {'id': '40', 'type': 'True', 'children': []}; {'id': '41', 'type': 'block', 'children': ['42', '62', '69', '89']}; {'id': '42', 'type': 'if_statement', 'children': ['43', '52']}; {'id': '43', 'type': 'boolean_operator', 'children': ['44', '47'], 'value': 'and'}; {'id': '44', 'type': 'comparison_operator', 'children': ['45', '46'], 'value': 'in'}; {'id': '45', 'type': 'string', 'children': [], 'value': "'status'"}; {'id': '46', 'type': 'identifier', 'children': [], 'value': 'info'}; {'id': '47', 'type': 'comparison_operator', 'children': ['48', '51'], 'value': '=='}; {'id': '48', 'type': 'subscript', 'children': ['49', '50']}; {'id': '49', 'type': 'identifier', 'children': [], 'value': 'info'}; {'id': '50', 'type': 'string', 'children': [], 'value': "'status'"}; {'id': '51', 'type': 'string', 'children': [], 'value': "'OK'"}; {'id': '52', 'type': 'block', 'children': ['53', '60']}; {'id': '53', 'type': 'expression_statement', 'children': ['54']}; {'id': '54', 'type': 'call', 'children': ['55', '58']}; {'id': '55', 'type': 'attribute', 'children': ['56', '57']}; {'id': '56', 'type': 'identifier', 'children': [], 'value': 'log'}; {'id': '57', 'type': 'identifier', 'children': [], 'value': 'debug'}; {'id': '58', 'type': 'argument_list', 'children': ['59']}; {'id': '59', 'type': 'string', 'children': [], 'value': "'Task has been finished!'"}; {'id': '60', 'type': 'return_statement', 'children': ['61']}; {'id': '61', 'type': 'True', 'children': []}; {'id': '62', 'type': 'expression_statement', 'children': ['63']}; {'id': '63', 'type': 'call', 'children': ['64', '67']}; {'id': '64', 'type': 'attribute', 'children': ['65', '66']}; {'id': '65', 'type': 'identifier', 'children': [], 'value': 'time'}; {'id': '66', 'type': 'identifier', 'children': [], 'value': 'sleep'}; {'id': '67', 'type': 'argument_list', 'children': ['68']}; {'id': '68', 'type': 'integer', 'children': [], 'value': '3'}; {'id': '69', 'type': 'if_statement', 'children': ['70', '79']}; {'id': '70', 'type': 'comparison_operator', 'children': ['71', '78'], 'value': '>'}; {'id': '71', 'type': 'binary_operator', 'children': ['72', '77'], 'value': '-'}; {'id': '72', 'type': 'call', 'children': ['73', '76']}; {'id': '73', 'type': 'attribute', 'children': ['74', '75']}; {'id': '74', 'type': 'identifier', 'children': [], 'value': 'time'}; {'id': '75', 'type': 'identifier', 'children': [], 'value': 'time'}; {'id': '76', 'type': 'argument_list', 'children': []}; {'id': '77', 'type': 'identifier', 'children': [], 'value': 'start_time'}; {'id': '78', 'type': 'identifier', 'children': [], 'value': 'timeout'}; {'id': '79', 'type': 'block', 'children': ['80', '87']}; {'id': '80', 'type': 'expression_statement', 'children': ['81']}; {'id': '81', 'type': 'call', 'children': ['82', '85']}; {'id': '82', 'type': 'attribute', 'children': ['83', '84']}; {'id': '83', 'type': 'identifier', 'children': [], 'value': 'log'}; {'id': '84', 'type': 'identifier', 'children': [], 'value': 'debug'}; {'id': '85', 'type': 'argument_list', 'children': ['86']}; {'id': '86', 'type': 'string', 'children': [], 'value': "'Timeout reached while waiting for task to be finished'"}; {'id': '87', 'type': 'return_statement', 'children': ['88']}; {'id': '88', 'type': 'False', 'children': []}; {'id': '89', 'type': 'expression_statement', 'children': ['90']}; {'id': '90', 'type': 'assignment', 'children': ['91', '92']}; {'id': '91', 'type': 'identifier', 'children': [], 'value': 'info'}; {'id': '92', 'type': 'call', 'children': ['93', '94']}; {'id': '93', 'type': 'identifier', 'children': [], 'value': '_lookup_proxmox_task'}; {'id': '94', 'type': 'argument_list', 'children': ['95']}; {'id': '95', 'type': 'identifier', 'children': [], 'value': 'upid'} | Wait until a the task has been finished successfully |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '15', '17']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'sys_register_SDL_renderer'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'typed_parameter', 'children': ['5', '6']}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'callback'}; {'id': '6', 'type': 'type', 'children': ['7']}; {'id': '7', 'type': 'generic_type', 'children': ['8', '9']}; {'id': '8', 'type': 'identifier', 'children': [], 'value': 'Callable'}; {'id': '9', 'type': 'type_parameter', 'children': ['10', '13']}; {'id': '10', 'type': 'type', 'children': ['11']}; {'id': '11', 'type': 'list', 'children': ['12'], 'value': '[Any]'}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'Any'}; {'id': '13', 'type': 'type', 'children': ['14']}; {'id': '14', 'type': 'None', 'children': []}; {'id': '15', 'type': 'type', 'children': ['16']}; {'id': '16', 'type': 'None', 'children': []}; {'id': '17', 'type': 'block', 'children': ['18']}; {'id': '18', 'type': 'with_statement', 'children': ['19', '27']}; {'id': '19', 'type': 'with_clause', 'children': ['20']}; {'id': '20', 'type': 'with_item', 'children': ['21']}; {'id': '21', 'type': 'as_pattern', 'children': ['22', '25']}; {'id': '22', 'type': 'call', 'children': ['23', '24']}; {'id': '23', 'type': 'identifier', 'children': [], 'value': '_PropagateException'}; {'id': '24', 'type': 'argument_list', 'children': []}; {'id': '25', 'type': 'as_pattern_target', 'children': ['26']}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'propagate'}; {'id': '27', 'type': 'block', 'children': ['28', '53']}; {'id': '28', 'type': 'decorated_definition', 'children': ['29', '38']}; {'id': '29', 'type': 'decorator', 'children': ['30']}; {'id': '30', 'type': 'call', 'children': ['31', '34']}; {'id': '31', 'type': 'attribute', 'children': ['32', '33']}; {'id': '32', 'type': 'identifier', 'children': [], 'value': 'ffi'}; {'id': '33', 'type': 'identifier', 'children': [], 'value': 'def_extern'}; {'id': '34', 'type': 'argument_list', 'children': ['35']}; {'id': '35', 'type': 'keyword_argument', 'children': ['36', '37']}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'onerror'}; {'id': '37', 'type': 'identifier', 'children': [], 'value': 'propagate'}; {'id': '38', 'type': 'function_definition', 'children': ['39', '40', '45', '47']}; {'id': '39', 'type': 'function_name', 'children': [], 'value': '_pycall_sdl_hook'}; {'id': '40', 'type': 'parameters', 'children': ['41']}; {'id': '41', 'type': 'typed_parameter', 'children': ['42', '43']}; {'id': '42', 'type': 'identifier', 'children': [], 'value': 'sdl_surface'}; {'id': '43', 'type': 'type', 'children': ['44']}; {'id': '44', 'type': 'identifier', 'children': [], 'value': 'Any'}; {'id': '45', 'type': 'type', 'children': ['46']}; {'id': '46', 'type': 'None', 'children': []}; {'id': '47', 'type': 'block', 'children': ['48']}; {'id': '48', 'type': 'expression_statement', 'children': ['49']}; {'id': '49', 'type': 'call', 'children': ['50', '51']}; {'id': '50', 'type': 'identifier', 'children': [], 'value': 'callback'}; {'id': '51', 'type': 'argument_list', 'children': ['52']}; {'id': '52', 'type': 'identifier', 'children': [], 'value': 'sdl_surface'}; {'id': '53', 'type': 'expression_statement', 'children': ['54']}; {'id': '54', 'type': 'call', 'children': ['55', '58']}; {'id': '55', 'type': 'attribute', 'children': ['56', '57']}; {'id': '56', 'type': 'identifier', 'children': [], 'value': 'lib'}; {'id': '57', 'type': 'identifier', 'children': [], 'value': 'TCOD_sys_register_SDL_renderer'}; {'id': '58', 'type': 'argument_list', 'children': ['59']}; {'id': '59', 'type': 'attribute', 'children': ['60', '61']}; {'id': '60', 'type': 'identifier', 'children': [], 'value': 'lib'}; {'id': '61', 'type': 'identifier', 'children': [], 'value': '_pycall_sdl_hook'} | Register a custom randering function with libtcod.
Note:
This callback will only be called by the SDL renderer.
The callack will receive a :any:`CData <ffi-cdata>` void* to an
SDL_Surface* struct.
The callback is called on every call to :any:`tcod.console_flush`.
Args:
callback Callable[[CData], None]:
A function which takes a single argument. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'bind_type'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'python_value'}; {'id': '5', 'type': 'block', 'children': ['6', '19', '28', '35', '46', '56']}; {'id': '6', 'type': 'expression_statement', 'children': ['7']}; {'id': '7', 'type': 'assignment', 'children': ['8', '9']}; {'id': '8', 'type': 'identifier', 'children': [], 'value': 'binding_table'}; {'id': '9', 'type': 'dictionary', 'children': ['10', '13', '16']}; {'id': '10', 'type': 'pair', 'children': ['11', '12']}; {'id': '11', 'type': 'string', 'children': [], 'value': "'bool'"}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'Bool'}; {'id': '13', 'type': 'pair', 'children': ['14', '15']}; {'id': '14', 'type': 'string', 'children': [], 'value': "'int'"}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'Int'}; {'id': '16', 'type': 'pair', 'children': ['17', '18']}; {'id': '17', 'type': 'string', 'children': [], 'value': "'float'"}; {'id': '18', 'type': 'identifier', 'children': [], 'value': 'Float'}; {'id': '19', 'type': 'if_statement', 'children': ['20', '23']}; {'id': '20', 'type': 'comparison_operator', 'children': ['21', '22'], 'value': 'is'}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'python_value'}; {'id': '22', 'type': 'None', 'children': []}; {'id': '23', 'type': 'block', 'children': ['24']}; {'id': '24', 'type': 'return_statement', 'children': ['25']}; {'id': '25', 'type': 'call', 'children': ['26', '27']}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'NoneType'}; {'id': '27', 'type': 'argument_list', 'children': []}; {'id': '28', 'type': 'expression_statement', 'children': ['29']}; {'id': '29', 'type': 'assignment', 'children': ['30', '31']}; {'id': '30', 'type': 'identifier', 'children': [], 'value': 'python_type'}; {'id': '31', 'type': 'call', 'children': ['32', '33']}; {'id': '32', 'type': 'identifier', 'children': [], 'value': 'type'}; {'id': '33', 'type': 'argument_list', 'children': ['34']}; {'id': '34', 'type': 'identifier', 'children': [], 'value': 'python_value'}; {'id': '35', 'type': 'expression_statement', 'children': ['36']}; {'id': '36', 'type': 'assignment', 'children': ['37', '38']}; {'id': '37', 'type': 'identifier', 'children': [], 'value': 'gibica_type'}; {'id': '38', 'type': 'call', 'children': ['39', '42']}; {'id': '39', 'type': 'attribute', 'children': ['40', '41']}; {'id': '40', 'type': 'identifier', 'children': [], 'value': 'binding_table'}; {'id': '41', 'type': 'identifier', 'children': [], 'value': 'get'}; {'id': '42', 'type': 'argument_list', 'children': ['43']}; {'id': '43', 'type': 'attribute', 'children': ['44', '45']}; {'id': '44', 'type': 'identifier', 'children': [], 'value': 'python_type'}; {'id': '45', 'type': 'identifier', 'children': [], 'value': '__name__'}; {'id': '46', 'type': 'if_statement', 'children': ['47', '50']}; {'id': '47', 'type': 'comparison_operator', 'children': ['48', '49'], 'value': 'is'}; {'id': '48', 'type': 'identifier', 'children': [], 'value': 'gibica_type'}; {'id': '49', 'type': 'None', 'children': []}; {'id': '50', 'type': 'block', 'children': ['51']}; {'id': '51', 'type': 'raise_statement', 'children': ['52']}; {'id': '52', 'type': 'call', 'children': ['53', '54']}; {'id': '53', 'type': 'identifier', 'children': [], 'value': 'TypeError'}; {'id': '54', 'type': 'argument_list', 'children': ['55']}; {'id': '55', 'type': 'string', 'children': [], 'value': "'Impossible to recognize underlying type.'"}; {'id': '56', 'type': 'return_statement', 'children': ['57']}; {'id': '57', 'type': 'call', 'children': ['58', '59']}; {'id': '58', 'type': 'identifier', 'children': [], 'value': 'gibica_type'}; {'id': '59', 'type': 'argument_list', 'children': ['60']}; {'id': '60', 'type': 'identifier', 'children': [], 'value': 'python_value'} | Return a Gibica type derived from a Python type. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'get_func_args'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'func'}; {'id': '5', 'type': 'block', 'children': ['6', '22', '42']}; {'id': '6', 'type': 'if_statement', 'children': ['7', '14']}; {'id': '7', 'type': 'call', 'children': ['8', '9']}; {'id': '8', 'type': 'identifier', 'children': [], 'value': 'isinstance'}; {'id': '9', 'type': 'argument_list', 'children': ['10', '11']}; {'id': '10', 'type': 'identifier', 'children': [], 'value': 'func'}; {'id': '11', 'type': 'attribute', 'children': ['12', '13']}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'functools'}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'partial'}; {'id': '14', 'type': 'block', 'children': ['15']}; {'id': '15', 'type': 'return_statement', 'children': ['16']}; {'id': '16', 'type': 'call', 'children': ['17', '18']}; {'id': '17', 'type': 'identifier', 'children': [], 'value': '_signature'}; {'id': '18', 'type': 'argument_list', 'children': ['19']}; {'id': '19', 'type': 'attribute', 'children': ['20', '21']}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'func'}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'func'}; {'id': '22', 'type': 'if_statement', 'children': ['23', '36']}; {'id': '23', 'type': 'boolean_operator', 'children': ['24', '30'], 'value': 'or'}; {'id': '24', 'type': 'call', 'children': ['25', '28']}; {'id': '25', 'type': 'attribute', 'children': ['26', '27']}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'inspect'}; {'id': '27', 'type': 'identifier', 'children': [], 'value': 'isfunction'}; {'id': '28', 'type': 'argument_list', 'children': ['29']}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'func'}; {'id': '30', 'type': 'call', 'children': ['31', '34']}; {'id': '31', 'type': 'attribute', 'children': ['32', '33']}; {'id': '32', 'type': 'identifier', 'children': [], 'value': 'inspect'}; {'id': '33', 'type': 'identifier', 'children': [], 'value': 'ismethod'}; {'id': '34', 'type': 'argument_list', 'children': ['35']}; {'id': '35', 'type': 'identifier', 'children': [], 'value': 'func'}; {'id': '36', 'type': 'block', 'children': ['37']}; {'id': '37', 'type': 'return_statement', 'children': ['38']}; {'id': '38', 'type': 'call', 'children': ['39', '40']}; {'id': '39', 'type': 'identifier', 'children': [], 'value': '_signature'}; {'id': '40', 'type': 'argument_list', 'children': ['41']}; {'id': '41', 'type': 'identifier', 'children': [], 'value': 'func'}; {'id': '42', 'type': 'return_statement', 'children': ['43']}; {'id': '43', 'type': 'call', 'children': ['44', '45']}; {'id': '44', 'type': 'identifier', 'children': [], 'value': '_signature'}; {'id': '45', 'type': 'argument_list', 'children': ['46']}; {'id': '46', 'type': 'attribute', 'children': ['47', '48']}; {'id': '47', 'type': 'identifier', 'children': [], 'value': 'func'}; {'id': '48', 'type': 'identifier', 'children': [], 'value': '__call__'} | Given a callable, return a tuple of argument names. Handles
`functools.partial` objects and class-based callables.
.. versionchanged:: 3.0.0a1
Do not return bound arguments, eg. ``self``. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'make_interval'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'long_name'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'short_name'}; {'id': '6', 'type': 'block', 'children': ['7']}; {'id': '7', 'type': 'return_statement', 'children': ['8']}; {'id': '8', 'type': 'call', 'children': ['9', '68']}; {'id': '9', 'type': 'attribute', 'children': ['10', '67']}; {'id': '10', 'type': 'call', 'children': ['11', '12']}; {'id': '11', 'type': 'identifier', 'children': [], 'value': 'Group'}; {'id': '12', 'type': 'argument_list', 'children': ['13']}; {'id': '13', 'type': 'binary_operator', 'children': ['14', '18'], 'value': '+'}; {'id': '14', 'type': 'call', 'children': ['15', '16']}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'Regex'}; {'id': '16', 'type': 'argument_list', 'children': ['17']}; {'id': '17', 'type': 'string', 'children': [], 'value': '"(-+)?[0-9]+"'}; {'id': '18', 'type': '()', 'children': ['19']}; {'id': '19', 'type': 'binary_operator', 'children': ['20', '58'], 'value': '|'}; {'id': '20', 'type': 'binary_operator', 'children': ['21', '54'], 'value': '|'}; {'id': '21', 'type': 'binary_operator', 'children': ['22', '45'], 'value': '|'}; {'id': '22', 'type': 'binary_operator', 'children': ['23', '41'], 'value': '|'}; {'id': '23', 'type': 'binary_operator', 'children': ['24', '30'], 'value': '|'}; {'id': '24', 'type': 'call', 'children': ['25', '26']}; {'id': '25', 'type': 'identifier', 'children': [], 'value': 'upkey'}; {'id': '26', 'type': 'argument_list', 'children': ['27']}; {'id': '27', 'type': 'binary_operator', 'children': ['28', '29'], 'value': '+'}; {'id': '28', 'type': 'identifier', 'children': [], 'value': 'long_name'}; {'id': '29', 'type': 'string', 'children': [], 'value': '"s"'}; {'id': '30', 'type': 'call', 'children': ['31', '39']}; {'id': '31', 'type': 'attribute', 'children': ['32', '38']}; {'id': '32', 'type': 'call', 'children': ['33', '34']}; {'id': '33', 'type': 'identifier', 'children': [], 'value': 'Regex'}; {'id': '34', 'type': 'argument_list', 'children': ['35']}; {'id': '35', 'type': 'binary_operator', 'children': ['36', '37'], 'value': '+'}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'long_name'}; {'id': '37', 'type': 'string', 'children': [], 'value': '"s"'}; {'id': '38', 'type': 'identifier', 'children': [], 'value': 'setParseAction'}; {'id': '39', 'type': 'argument_list', 'children': ['40']}; {'id': '40', 'type': 'identifier', 'children': [], 'value': 'upcaseTokens'}; {'id': '41', 'type': 'call', 'children': ['42', '43']}; {'id': '42', 'type': 'identifier', 'children': [], 'value': 'upkey'}; {'id': '43', 'type': 'argument_list', 'children': ['44']}; {'id': '44', 'type': 'identifier', 'children': [], 'value': 'long_name'}; {'id': '45', 'type': 'call', 'children': ['46', '52']}; {'id': '46', 'type': 'attribute', 'children': ['47', '51']}; {'id': '47', 'type': 'call', 'children': ['48', '49']}; {'id': '48', 'type': 'identifier', 'children': [], 'value': 'Regex'}; {'id': '49', 'type': 'argument_list', 'children': ['50']}; {'id': '50', 'type': 'identifier', 'children': [], 'value': 'long_name'}; {'id': '51', 'type': 'identifier', 'children': [], 'value': 'setParseAction'}; {'id': '52', 'type': 'argument_list', 'children': ['53']}; {'id': '53', 'type': 'identifier', 'children': [], 'value': 'upcaseTokens'}; {'id': '54', 'type': 'call', 'children': ['55', '56']}; {'id': '55', 'type': 'identifier', 'children': [], 'value': 'upkey'}; {'id': '56', 'type': 'argument_list', 'children': ['57']}; {'id': '57', 'type': 'identifier', 'children': [], 'value': 'short_name'}; {'id': '58', 'type': 'call', 'children': ['59', '65']}; {'id': '59', 'type': 'attribute', 'children': ['60', '64']}; {'id': '60', 'type': 'call', 'children': ['61', '62']}; {'id': '61', 'type': 'identifier', 'children': [], 'value': 'Regex'}; {'id': '62', 'type': 'argument_list', 'children': ['63']}; {'id': '63', 'type': 'identifier', 'children': [], 'value': 'short_name'}; {'id': '64', 'type': 'identifier', 'children': [], 'value': 'setParseAction'}; {'id': '65', 'type': 'argument_list', 'children': ['66']}; {'id': '66', 'type': 'identifier', 'children': [], 'value': 'upcaseTokens'}; {'id': '67', 'type': 'identifier', 'children': [], 'value': 'setResultsName'}; {'id': '68', 'type': 'argument_list', 'children': ['69']}; {'id': '69', 'type': 'identifier', 'children': [], 'value': 'long_name'} | Create an interval segment |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'samples'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'block', 'children': ['6', '27', '54']}; {'id': '6', 'type': 'if_statement', 'children': ['7', '19']}; {'id': '7', 'type': 'boolean_operator', 'children': ['8', '14'], 'value': 'and'}; {'id': '8', 'type': 'not_operator', 'children': ['9']}; {'id': '9', 'type': 'call', 'children': ['10', '11']}; {'id': '10', 'type': 'identifier', 'children': [], 'value': 'hasattr'}; {'id': '11', 'type': 'argument_list', 'children': ['12', '13']}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '13', 'type': 'string', 'children': [], 'value': "'sampler'"}; {'id': '14', 'type': 'comparison_operator', 'children': ['15', '18'], 'value': 'is'}; {'id': '15', 'type': 'attribute', 'children': ['16', '17']}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '17', 'type': 'identifier', 'children': [], 'value': '_samples'}; {'id': '18', 'type': 'None', 'children': []}; {'id': '19', 'type': 'block', 'children': ['20']}; {'id': '20', 'type': 'raise_statement', 'children': ['21']}; {'id': '21', 'type': 'call', 'children': ['22', '23']}; {'id': '22', 'type': 'identifier', 'children': [], 'value': 'AttributeError'}; {'id': '23', 'type': 'argument_list', 'children': ['24']}; {'id': '24', 'type': 'binary_operator', 'children': ['25', '26'], 'value': '+'}; {'id': '25', 'type': 'string', 'children': [], 'value': "'Must run MCMC (or load from file) '"}; {'id': '26', 'type': 'string', 'children': [], 'value': "'before accessing samples'"}; {'id': '27', 'type': 'if_statement', 'children': ['28', '33', '40']}; {'id': '28', 'type': 'comparison_operator', 'children': ['29', '32'], 'value': 'is not'}; {'id': '29', 'type': 'attribute', 'children': ['30', '31']}; {'id': '30', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '31', 'type': 'identifier', 'children': [], 'value': '_samples'}; {'id': '32', 'type': 'None', 'children': []}; {'id': '33', 'type': 'block', 'children': ['34']}; {'id': '34', 'type': 'expression_statement', 'children': ['35']}; {'id': '35', 'type': 'assignment', 'children': ['36', '37']}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'df'}; {'id': '37', 'type': 'attribute', 'children': ['38', '39']}; {'id': '38', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '39', 'type': 'identifier', 'children': [], 'value': '_samples'}; {'id': '40', 'type': 'else_clause', 'children': ['41']}; {'id': '41', 'type': 'block', 'children': ['42', '48']}; {'id': '42', 'type': 'expression_statement', 'children': ['43']}; {'id': '43', 'type': 'call', 'children': ['44', '47']}; {'id': '44', 'type': 'attribute', 'children': ['45', '46']}; {'id': '45', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '46', 'type': 'identifier', 'children': [], 'value': '_make_samples'}; {'id': '47', 'type': 'argument_list', 'children': []}; {'id': '48', 'type': 'expression_statement', 'children': ['49']}; {'id': '49', 'type': 'assignment', 'children': ['50', '51']}; {'id': '50', 'type': 'identifier', 'children': [], 'value': 'df'}; {'id': '51', 'type': 'attribute', 'children': ['52', '53']}; {'id': '52', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '53', 'type': 'identifier', 'children': [], 'value': '_samples'}; {'id': '54', 'type': 'return_statement', 'children': ['55']}; {'id': '55', 'type': 'identifier', 'children': [], 'value': 'df'} | Dataframe with samples drawn from isochrone according to posterior
Columns include both the sampling parameters from the MCMC
fit (mass, age, Fe/H, [distance, A_V]), and also evaluation
of the :class:`Isochrone` at each of these sample points---this
is how chains of physical/observable parameters get produced. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_iter_keys'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'key'}; {'id': '5', 'type': 'block', 'children': ['6']}; {'id': '6', 'type': 'for_statement', 'children': ['7', '8', '19']}; {'id': '7', 'type': 'identifier', 'children': [], 'value': 'i'}; {'id': '8', 'type': 'call', 'children': ['9', '10']}; {'id': '9', 'type': 'identifier', 'children': [], 'value': 'range'}; {'id': '10', 'type': 'argument_list', 'children': ['11']}; {'id': '11', 'type': 'subscript', 'children': ['12', '18']}; {'id': '12', 'type': 'call', 'children': ['13', '16']}; {'id': '13', 'type': 'attribute', 'children': ['14', '15']}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'winreg'}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'QueryInfoKey'}; {'id': '16', 'type': 'argument_list', 'children': ['17']}; {'id': '17', 'type': 'identifier', 'children': [], 'value': 'key'}; {'id': '18', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '19', 'type': 'block', 'children': ['20']}; {'id': '20', 'type': 'expression_statement', 'children': ['21']}; {'id': '21', 'type': 'yield', 'children': ['22']}; {'id': '22', 'type': 'call', 'children': ['23', '26']}; {'id': '23', 'type': 'attribute', 'children': ['24', '25']}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'winreg'}; {'id': '25', 'type': 'identifier', 'children': [], 'value': 'OpenKey'}; {'id': '26', 'type': 'argument_list', 'children': ['27', '28']}; {'id': '27', 'type': 'identifier', 'children': [], 'value': 'key'}; {'id': '28', 'type': 'call', 'children': ['29', '32']}; {'id': '29', 'type': 'attribute', 'children': ['30', '31']}; {'id': '30', 'type': 'identifier', 'children': [], 'value': 'winreg'}; {'id': '31', 'type': 'identifier', 'children': [], 'value': 'EnumKey'}; {'id': '32', 'type': 'argument_list', 'children': ['33', '34']}; {'id': '33', 'type': 'identifier', 'children': [], 'value': 'key'}; {'id': '34', 'type': 'identifier', 'children': [], 'value': 'i'} | ! Iterate over subkeys of a key |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '8']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'primers'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'default_parameter', 'children': ['6', '7']}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'tm'}; {'id': '7', 'type': 'integer', 'children': [], 'value': '60'}; {'id': '8', 'type': 'block', 'children': ['9', '27']}; {'id': '9', 'type': 'expression_statement', 'children': ['10']}; {'id': '10', 'type': 'assignment', 'children': ['11', '14']}; {'id': '11', 'type': 'attribute', 'children': ['12', '13']}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'primers'}; {'id': '14', 'type': 'call', 'children': ['15', '20']}; {'id': '15', 'type': 'attribute', 'children': ['16', '19']}; {'id': '16', 'type': 'attribute', 'children': ['17', '18']}; {'id': '17', 'type': 'identifier', 'children': [], 'value': 'coral'}; {'id': '18', 'type': 'identifier', 'children': [], 'value': 'design'}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'primers'}; {'id': '20', 'type': 'argument_list', 'children': ['21', '24']}; {'id': '21', 'type': 'attribute', 'children': ['22', '23']}; {'id': '22', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '23', 'type': 'identifier', 'children': [], 'value': 'template'}; {'id': '24', 'type': 'keyword_argument', 'children': ['25', '26']}; {'id': '25', 'type': 'identifier', 'children': [], 'value': 'tm'}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'tm'}; {'id': '27', 'type': 'return_statement', 'children': ['28']}; {'id': '28', 'type': 'attribute', 'children': ['29', '30']}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '30', 'type': 'identifier', 'children': [], 'value': 'primers'} | Design primers for amplifying the assembled sequence.
:param tm: melting temperature (lower than overlaps is best).
:type tm: float
:returns: Primer list (the output of coral.design.primers).
:rtype: list |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '11']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'gborders'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '8']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'img'}; {'id': '5', 'type': 'default_parameter', 'children': ['6', '7']}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'alpha'}; {'id': '7', 'type': 'float', 'children': [], 'value': '1.0'}; {'id': '8', 'type': 'default_parameter', 'children': ['9', '10']}; {'id': '9', 'type': 'identifier', 'children': [], 'value': 'sigma'}; {'id': '10', 'type': 'float', 'children': [], 'value': '1.0'}; {'id': '11', 'type': 'block', 'children': ['12', '23']}; {'id': '12', 'type': 'expression_statement', 'children': ['13']}; {'id': '13', 'type': 'assignment', 'children': ['14', '15']}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'gradnorm'}; {'id': '15', 'type': 'call', 'children': ['16', '17']}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'gaussian_gradient_magnitude'}; {'id': '17', 'type': 'argument_list', 'children': ['18', '19', '20']}; {'id': '18', 'type': 'identifier', 'children': [], 'value': 'img'}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'sigma'}; {'id': '20', 'type': 'keyword_argument', 'children': ['21', '22']}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'mode'}; {'id': '22', 'type': 'string', 'children': [], 'value': "'constant'"}; {'id': '23', 'type': 'return_statement', 'children': ['24']}; {'id': '24', 'type': 'binary_operator', 'children': ['25', '26'], 'value': '/'}; {'id': '25', 'type': 'float', 'children': [], 'value': '1.0'}; {'id': '26', 'type': 'call', 'children': ['27', '30']}; {'id': '27', 'type': 'attribute', 'children': ['28', '29']}; {'id': '28', 'type': 'identifier', 'children': [], 'value': 'np'}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'sqrt'}; {'id': '30', 'type': 'argument_list', 'children': ['31']}; {'id': '31', 'type': 'binary_operator', 'children': ['32', '33'], 'value': '+'}; {'id': '32', 'type': 'float', 'children': [], 'value': '1.0'}; {'id': '33', 'type': 'binary_operator', 'children': ['34', '35'], 'value': '*'}; {'id': '34', 'type': 'identifier', 'children': [], 'value': 'alpha'}; {'id': '35', 'type': 'identifier', 'children': [], 'value': 'gradnorm'} | Stopping criterion for image borders. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '9']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'get_wsgi_request_object'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6', '7', '8']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'curr_request'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'method'}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'url'}; {'id': '7', 'type': 'identifier', 'children': [], 'value': 'headers'}; {'id': '8', 'type': 'identifier', 'children': [], 'value': 'body'}; {'id': '9', 'type': 'block', 'children': ['10', '17', '27', '44', '51', '63', '69', '77', '83', '101']}; {'id': '10', 'type': 'expression_statement', 'children': ['11']}; {'id': '11', 'type': 'assignment', 'children': ['12', '13']}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'x_headers'}; {'id': '13', 'type': 'call', 'children': ['14', '15']}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'headers_to_include_from_request'}; {'id': '15', 'type': 'argument_list', 'children': ['16']}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'curr_request'}; {'id': '17', 'type': 'expression_statement', 'children': ['18']}; {'id': '18', 'type': 'assignment', 'children': ['19', '22']}; {'id': '19', 'type': 'pattern_list', 'children': ['20', '21']}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'method'}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 't_headers'}; {'id': '22', 'type': 'call', 'children': ['23', '24']}; {'id': '23', 'type': 'identifier', 'children': [], 'value': 'pre_process_method_headers'}; {'id': '24', 'type': 'argument_list', 'children': ['25', '26']}; {'id': '25', 'type': 'identifier', 'children': [], 'value': 'method'}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'headers'}; {'id': '27', 'type': 'if_statement', 'children': ['28', '31']}; {'id': '28', 'type': 'comparison_operator', 'children': ['29', '30'], 'value': 'not in'}; {'id': '29', 'type': 'string', 'children': [], 'value': '"CONTENT_TYPE"'}; {'id': '30', 'type': 'identifier', 'children': [], 'value': 't_headers'}; {'id': '31', 'type': 'block', 'children': ['32']}; {'id': '32', 'type': 'expression_statement', 'children': ['33']}; {'id': '33', 'type': 'call', 'children': ['34', '37']}; {'id': '34', 'type': 'attribute', 'children': ['35', '36']}; {'id': '35', 'type': 'identifier', 'children': [], 'value': 't_headers'}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'update'}; {'id': '37', 'type': 'argument_list', 'children': ['38']}; {'id': '38', 'type': 'dictionary', 'children': ['39']}; {'id': '39', 'type': 'pair', 'children': ['40', '41']}; {'id': '40', 'type': 'string', 'children': [], 'value': '"CONTENT_TYPE"'}; {'id': '41', 'type': 'attribute', 'children': ['42', '43']}; {'id': '42', 'type': 'identifier', 'children': [], 'value': '_settings'}; {'id': '43', 'type': 'identifier', 'children': [], 'value': 'DEFAULT_CONTENT_TYPE'}; {'id': '44', 'type': 'expression_statement', 'children': ['45']}; {'id': '45', 'type': 'call', 'children': ['46', '49']}; {'id': '46', 'type': 'attribute', 'children': ['47', '48']}; {'id': '47', 'type': 'identifier', 'children': [], 'value': 'x_headers'}; {'id': '48', 'type': 'identifier', 'children': [], 'value': 'update'}; {'id': '49', 'type': 'argument_list', 'children': ['50']}; {'id': '50', 'type': 'identifier', 'children': [], 'value': 't_headers'}; {'id': '51', 'type': 'expression_statement', 'children': ['52']}; {'id': '52', 'type': 'assignment', 'children': ['53', '54']}; {'id': '53', 'type': 'identifier', 'children': [], 'value': 'content_type'}; {'id': '54', 'type': 'call', 'children': ['55', '58']}; {'id': '55', 'type': 'attribute', 'children': ['56', '57']}; {'id': '56', 'type': 'identifier', 'children': [], 'value': 'x_headers'}; {'id': '57', 'type': 'identifier', 'children': [], 'value': 'get'}; {'id': '58', 'type': 'argument_list', 'children': ['59', '60']}; {'id': '59', 'type': 'string', 'children': [], 'value': '"CONTENT_TYPE"'}; {'id': '60', 'type': 'attribute', 'children': ['61', '62']}; {'id': '61', 'type': 'identifier', 'children': [], 'value': '_settings'}; {'id': '62', 'type': 'identifier', 'children': [], 'value': 'DEFAULT_CONTENT_TYPE'}; {'id': '63', 'type': 'expression_statement', 'children': ['64']}; {'id': '64', 'type': 'assignment', 'children': ['65', '66']}; {'id': '65', 'type': 'identifier', 'children': [], 'value': '_request_factory'}; {'id': '66', 'type': 'call', 'children': ['67', '68']}; {'id': '67', 'type': 'identifier', 'children': [], 'value': 'BatchRequestFactory'}; {'id': '68', 'type': 'argument_list', 'children': []}; {'id': '69', 'type': 'expression_statement', 'children': ['70']}; {'id': '70', 'type': 'assignment', 'children': ['71', '72']}; {'id': '71', 'type': 'identifier', 'children': [], 'value': '_request_provider'}; {'id': '72', 'type': 'call', 'children': ['73', '74']}; {'id': '73', 'type': 'identifier', 'children': [], 'value': 'getattr'}; {'id': '74', 'type': 'argument_list', 'children': ['75', '76']}; {'id': '75', 'type': 'identifier', 'children': [], 'value': '_request_factory'}; {'id': '76', 'type': 'identifier', 'children': [], 'value': 'method'}; {'id': '77', 'type': 'expression_statement', 'children': ['78']}; {'id': '78', 'type': 'assignment', 'children': ['79', '80']}; {'id': '79', 'type': 'identifier', 'children': [], 'value': 'secure'}; {'id': '80', 'type': 'attribute', 'children': ['81', '82']}; {'id': '81', 'type': 'identifier', 'children': [], 'value': '_settings'}; {'id': '82', 'type': 'identifier', 'children': [], 'value': 'USE_HTTPS'}; {'id': '83', 'type': 'expression_statement', 'children': ['84']}; {'id': '84', 'type': 'assignment', 'children': ['85', '86']}; {'id': '85', 'type': 'identifier', 'children': [], 'value': 'request'}; {'id': '86', 'type': 'call', 'children': ['87', '88']}; {'id': '87', 'type': 'identifier', 'children': [], 'value': '_request_provider'}; {'id': '88', 'type': 'argument_list', 'children': ['89', '90', '93', '96', '99']}; {'id': '89', 'type': 'identifier', 'children': [], 'value': 'url'}; {'id': '90', 'type': 'keyword_argument', 'children': ['91', '92']}; {'id': '91', 'type': 'identifier', 'children': [], 'value': 'data'}; {'id': '92', 'type': 'identifier', 'children': [], 'value': 'body'}; {'id': '93', 'type': 'keyword_argument', 'children': ['94', '95']}; {'id': '94', 'type': 'identifier', 'children': [], 'value': 'secure'}; {'id': '95', 'type': 'identifier', 'children': [], 'value': 'secure'}; {'id': '96', 'type': 'keyword_argument', 'children': ['97', '98']}; {'id': '97', 'type': 'identifier', 'children': [], 'value': 'content_type'}; {'id': '98', 'type': 'identifier', 'children': [], 'value': 'content_type'}; {'id': '99', 'type': 'dictionary_splat', 'children': ['100']}; {'id': '100', 'type': 'identifier', 'children': [], 'value': 'x_headers'}; {'id': '101', 'type': 'return_statement', 'children': ['102']}; {'id': '102', 'type': 'identifier', 'children': [], 'value': 'request'} | Based on the given request parameters, constructs and returns the WSGI request object. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'from_snl'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'cls'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'snl'}; {'id': '6', 'type': 'block', 'children': ['7', '11', '46']}; {'id': '7', 'type': 'expression_statement', 'children': ['8']}; {'id': '8', 'type': 'assignment', 'children': ['9', '10']}; {'id': '9', 'type': 'identifier', 'children': [], 'value': 'hist'}; {'id': '10', 'type': 'list', 'children': [], 'value': '[]'}; {'id': '11', 'type': 'for_statement', 'children': ['12', '13', '16']}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'h'}; {'id': '13', 'type': 'attribute', 'children': ['14', '15']}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'snl'}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'history'}; {'id': '16', 'type': 'block', 'children': ['17', '23', '39']}; {'id': '17', 'type': 'expression_statement', 'children': ['18']}; {'id': '18', 'type': 'assignment', 'children': ['19', '20']}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'd'}; {'id': '20', 'type': 'attribute', 'children': ['21', '22']}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'h'}; {'id': '22', 'type': 'identifier', 'children': [], 'value': 'description'}; {'id': '23', 'type': 'expression_statement', 'children': ['24']}; {'id': '24', 'type': 'assignment', 'children': ['25', '28']}; {'id': '25', 'type': 'subscript', 'children': ['26', '27']}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'd'}; {'id': '27', 'type': 'string', 'children': [], 'value': "'_snl'"}; {'id': '28', 'type': 'dictionary', 'children': ['29', '34']}; {'id': '29', 'type': 'pair', 'children': ['30', '31']}; {'id': '30', 'type': 'string', 'children': [], 'value': "'url'"}; {'id': '31', 'type': 'attribute', 'children': ['32', '33']}; {'id': '32', 'type': 'identifier', 'children': [], 'value': 'h'}; {'id': '33', 'type': 'identifier', 'children': [], 'value': 'url'}; {'id': '34', 'type': 'pair', 'children': ['35', '36']}; {'id': '35', 'type': 'string', 'children': [], 'value': "'name'"}; {'id': '36', 'type': 'attribute', 'children': ['37', '38']}; {'id': '37', 'type': 'identifier', 'children': [], 'value': 'h'}; {'id': '38', 'type': 'identifier', 'children': [], 'value': 'name'}; {'id': '39', 'type': 'expression_statement', 'children': ['40']}; {'id': '40', 'type': 'call', 'children': ['41', '44']}; {'id': '41', 'type': 'attribute', 'children': ['42', '43']}; {'id': '42', 'type': 'identifier', 'children': [], 'value': 'hist'}; {'id': '43', 'type': 'identifier', 'children': [], 'value': 'append'}; {'id': '44', 'type': 'argument_list', 'children': ['45']}; {'id': '45', 'type': 'identifier', 'children': [], 'value': 'd'}; {'id': '46', 'type': 'return_statement', 'children': ['47']}; {'id': '47', 'type': 'call', 'children': ['48', '49']}; {'id': '48', 'type': 'identifier', 'children': [], 'value': 'cls'}; {'id': '49', 'type': 'argument_list', 'children': ['50', '53']}; {'id': '50', 'type': 'attribute', 'children': ['51', '52']}; {'id': '51', 'type': 'identifier', 'children': [], 'value': 'snl'}; {'id': '52', 'type': 'identifier', 'children': [], 'value': 'structure'}; {'id': '53', 'type': 'keyword_argument', 'children': ['54', '55']}; {'id': '54', 'type': 'identifier', 'children': [], 'value': 'history'}; {'id': '55', 'type': 'identifier', 'children': [], 'value': 'hist'} | Create TransformedStructure from SNL.
Args:
snl (StructureNL): Starting snl
Returns:
TransformedStructure |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'get_tissue_in_references'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'entry'}; {'id': '6', 'type': 'block', 'children': ['7', '11', '15', '30', '67']}; {'id': '7', 'type': 'expression_statement', 'children': ['8']}; {'id': '8', 'type': 'assignment', 'children': ['9', '10']}; {'id': '9', 'type': 'identifier', 'children': [], 'value': 'tissue_in_references'}; {'id': '10', 'type': 'list', 'children': [], 'value': '[]'}; {'id': '11', 'type': 'expression_statement', 'children': ['12']}; {'id': '12', 'type': 'assignment', 'children': ['13', '14']}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'query'}; {'id': '14', 'type': 'string', 'children': [], 'value': '"./reference/source/tissue"'}; {'id': '15', 'type': 'expression_statement', 'children': ['16']}; {'id': '16', 'type': 'assignment', 'children': ['17', '18']}; {'id': '17', 'type': 'identifier', 'children': [], 'value': 'tissues'}; {'id': '18', 'type': 'set_comprehension', 'children': ['19', '22']}; {'id': '19', 'type': 'attribute', 'children': ['20', '21']}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'x'}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'text'}; {'id': '22', 'type': 'for_in_clause', 'children': ['23', '24']}; {'id': '23', 'type': 'identifier', 'children': [], 'value': 'x'}; {'id': '24', 'type': 'call', 'children': ['25', '28']}; {'id': '25', 'type': 'attribute', 'children': ['26', '27']}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'entry'}; {'id': '27', 'type': 'identifier', 'children': [], 'value': 'iterfind'}; {'id': '28', 'type': 'argument_list', 'children': ['29']}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'query'}; {'id': '30', 'type': 'for_statement', 'children': ['31', '32', '33']}; {'id': '31', 'type': 'identifier', 'children': [], 'value': 'tissue'}; {'id': '32', 'type': 'identifier', 'children': [], 'value': 'tissues'}; {'id': '33', 'type': 'block', 'children': ['34', '56']}; {'id': '34', 'type': 'if_statement', 'children': ['35', '40']}; {'id': '35', 'type': 'comparison_operator', 'children': ['36', '37'], 'value': 'not in'}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'tissue'}; {'id': '37', 'type': 'attribute', 'children': ['38', '39']}; {'id': '38', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '39', 'type': 'identifier', 'children': [], 'value': 'tissues'}; {'id': '40', 'type': 'block', 'children': ['41']}; {'id': '41', 'type': 'expression_statement', 'children': ['42']}; {'id': '42', 'type': 'assignment', 'children': ['43', '48']}; {'id': '43', 'type': 'subscript', 'children': ['44', '47']}; {'id': '44', 'type': 'attribute', 'children': ['45', '46']}; {'id': '45', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '46', 'type': 'identifier', 'children': [], 'value': 'tissues'}; {'id': '47', 'type': 'identifier', 'children': [], 'value': 'tissue'}; {'id': '48', 'type': 'call', 'children': ['49', '52']}; {'id': '49', 'type': 'attribute', 'children': ['50', '51']}; {'id': '50', 'type': 'identifier', 'children': [], 'value': 'models'}; {'id': '51', 'type': 'identifier', 'children': [], 'value': 'TissueInReference'}; {'id': '52', 'type': 'argument_list', 'children': ['53']}; {'id': '53', 'type': 'keyword_argument', 'children': ['54', '55']}; {'id': '54', 'type': 'identifier', 'children': [], 'value': 'tissue'}; {'id': '55', 'type': 'identifier', 'children': [], 'value': 'tissue'}; {'id': '56', 'type': 'expression_statement', 'children': ['57']}; {'id': '57', 'type': 'call', 'children': ['58', '61']}; {'id': '58', 'type': 'attribute', 'children': ['59', '60']}; {'id': '59', 'type': 'identifier', 'children': [], 'value': 'tissue_in_references'}; {'id': '60', 'type': 'identifier', 'children': [], 'value': 'append'}; {'id': '61', 'type': 'argument_list', 'children': ['62']}; {'id': '62', 'type': 'subscript', 'children': ['63', '66']}; {'id': '63', 'type': 'attribute', 'children': ['64', '65']}; {'id': '64', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '65', 'type': 'identifier', 'children': [], 'value': 'tissues'}; {'id': '66', 'type': 'identifier', 'children': [], 'value': 'tissue'}; {'id': '67', 'type': 'return_statement', 'children': ['68']}; {'id': '68', 'type': 'identifier', 'children': [], 'value': 'tissue_in_references'} | get list of models.TissueInReference from XML node entry
:param entry: XML node entry
:return: list of :class:`pyuniprot.manager.models.TissueInReference` objects |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'stream_members'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'stream_id'}; {'id': '6', 'type': 'block', 'children': ['7', '33', '46']}; {'id': '7', 'type': 'expression_statement', 'children': ['8']}; {'id': '8', 'type': 'assignment', 'children': ['9', '12']}; {'id': '9', 'type': 'pattern_list', 'children': ['10', '11']}; {'id': '10', 'type': 'identifier', 'children': [], 'value': 'response'}; {'id': '11', 'type': 'identifier', 'children': [], 'value': 'status_code'}; {'id': '12', 'type': 'call', 'children': ['13', '32']}; {'id': '13', 'type': 'attribute', 'children': ['14', '31']}; {'id': '14', 'type': 'call', 'children': ['15', '22']}; {'id': '15', 'type': 'attribute', 'children': ['16', '21']}; {'id': '16', 'type': 'attribute', 'children': ['17', '20']}; {'id': '17', 'type': 'attribute', 'children': ['18', '19']}; {'id': '18', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '19', 'type': 'identifier', 'children': [], 'value': '__pod__'}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'Streams'}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'get_v1_admin_stream_id_membership_list'}; {'id': '22', 'type': 'argument_list', 'children': ['23', '28']}; {'id': '23', 'type': 'keyword_argument', 'children': ['24', '25']}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'sessionToken'}; {'id': '25', 'type': 'attribute', 'children': ['26', '27']}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '27', 'type': 'identifier', 'children': [], 'value': '__session__'}; {'id': '28', 'type': 'keyword_argument', 'children': ['29', '30']}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'id'}; {'id': '30', 'type': 'identifier', 'children': [], 'value': 'stream_id'}; {'id': '31', 'type': 'identifier', 'children': [], 'value': 'result'}; {'id': '32', 'type': 'argument_list', 'children': []}; {'id': '33', 'type': 'expression_statement', 'children': ['34']}; {'id': '34', 'type': 'call', 'children': ['35', '40']}; {'id': '35', 'type': 'attribute', 'children': ['36', '39']}; {'id': '36', 'type': 'attribute', 'children': ['37', '38']}; {'id': '37', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '38', 'type': 'identifier', 'children': [], 'value': 'logger'}; {'id': '39', 'type': 'identifier', 'children': [], 'value': 'debug'}; {'id': '40', 'type': 'argument_list', 'children': ['41']}; {'id': '41', 'type': 'binary_operator', 'children': ['42', '43'], 'value': '%'}; {'id': '42', 'type': 'string', 'children': [], 'value': "'%s: %s'"}; {'id': '43', 'type': 'tuple', 'children': ['44', '45']}; {'id': '44', 'type': 'identifier', 'children': [], 'value': 'status_code'}; {'id': '45', 'type': 'identifier', 'children': [], 'value': 'response'}; {'id': '46', 'type': 'return_statement', 'children': ['47']}; {'id': '47', 'type': 'expression_list', 'children': ['48', '49']}; {'id': '48', 'type': 'identifier', 'children': [], 'value': 'status_code'}; {'id': '49', 'type': 'identifier', 'children': [], 'value': 'response'} | get stream members |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'process_binding_statements'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'block', 'children': ['6', '12', '16', '28', '105']}; {'id': '6', 'type': 'expression_statement', 'children': ['7']}; {'id': '7', 'type': 'assignment', 'children': ['8', '9']}; {'id': '8', 'type': 'identifier', 'children': [], 'value': 'G'}; {'id': '9', 'type': 'attribute', 'children': ['10', '11']}; {'id': '10', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '11', 'type': 'identifier', 'children': [], 'value': 'G'}; {'id': '12', 'type': 'expression_statement', 'children': ['13']}; {'id': '13', 'type': 'assignment', 'children': ['14', '15']}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'statements'}; {'id': '15', 'type': 'list', 'children': [], 'value': '[]'}; {'id': '16', 'type': 'expression_statement', 'children': ['17']}; {'id': '17', 'type': 'assignment', 'children': ['18', '19']}; {'id': '18', 'type': 'identifier', 'children': [], 'value': 'binding_nodes'}; {'id': '19', 'type': 'call', 'children': ['20', '23']}; {'id': '20', 'type': 'attribute', 'children': ['21', '22']}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '22', 'type': 'identifier', 'children': [], 'value': 'find_event_with_outgoing_edges'}; {'id': '23', 'type': 'argument_list', 'children': ['24', '25']}; {'id': '24', 'type': 'string', 'children': [], 'value': "'Binding'"}; {'id': '25', 'type': 'list', 'children': ['26', '27'], 'value': "['Theme',\n 'Theme2']"}; {'id': '26', 'type': 'string', 'children': [], 'value': "'Theme'"}; {'id': '27', 'type': 'string', 'children': [], 'value': "'Theme2'"}; {'id': '28', 'type': 'for_statement', 'children': ['29', '30', '31']}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'node'}; {'id': '30', 'type': 'identifier', 'children': [], 'value': 'binding_nodes'}; {'id': '31', 'type': 'block', 'children': ['32', '42', '52', '62', '67', '72', '84']}; {'id': '32', 'type': 'expression_statement', 'children': ['33']}; {'id': '33', 'type': 'assignment', 'children': ['34', '35']}; {'id': '34', 'type': 'identifier', 'children': [], 'value': 'theme1'}; {'id': '35', 'type': 'call', 'children': ['36', '39']}; {'id': '36', 'type': 'attribute', 'children': ['37', '38']}; {'id': '37', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '38', 'type': 'identifier', 'children': [], 'value': 'get_entity_text_for_relation'}; {'id': '39', 'type': 'argument_list', 'children': ['40', '41']}; {'id': '40', 'type': 'identifier', 'children': [], 'value': 'node'}; {'id': '41', 'type': 'string', 'children': [], 'value': "'Theme'"}; {'id': '42', 'type': 'expression_statement', 'children': ['43']}; {'id': '43', 'type': 'assignment', 'children': ['44', '45']}; {'id': '44', 'type': 'identifier', 'children': [], 'value': 'theme1_node'}; {'id': '45', 'type': 'call', 'children': ['46', '49']}; {'id': '46', 'type': 'attribute', 'children': ['47', '48']}; {'id': '47', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '48', 'type': 'identifier', 'children': [], 'value': 'get_related_node'}; {'id': '49', 'type': 'argument_list', 'children': ['50', '51']}; {'id': '50', 'type': 'identifier', 'children': [], 'value': 'node'}; {'id': '51', 'type': 'string', 'children': [], 'value': "'Theme'"}; {'id': '52', 'type': 'expression_statement', 'children': ['53']}; {'id': '53', 'type': 'assignment', 'children': ['54', '55']}; {'id': '54', 'type': 'identifier', 'children': [], 'value': 'theme2'}; {'id': '55', 'type': 'call', 'children': ['56', '59']}; {'id': '56', 'type': 'attribute', 'children': ['57', '58']}; {'id': '57', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '58', 'type': 'identifier', 'children': [], 'value': 'get_entity_text_for_relation'}; {'id': '59', 'type': 'argument_list', 'children': ['60', '61']}; {'id': '60', 'type': 'identifier', 'children': [], 'value': 'node'}; {'id': '61', 'type': 'string', 'children': [], 'value': "'Theme2'"}; {'id': '62', 'type': 'assert_statement', 'children': ['63']}; {'id': '63', 'type': '()', 'children': ['64']}; {'id': '64', 'type': 'comparison_operator', 'children': ['65', '66'], 'value': 'is not'}; {'id': '65', 'type': 'identifier', 'children': [], 'value': 'theme1'}; {'id': '66', 'type': 'None', 'children': []}; {'id': '67', 'type': 'assert_statement', 'children': ['68']}; {'id': '68', 'type': '()', 'children': ['69']}; {'id': '69', 'type': 'comparison_operator', 'children': ['70', '71'], 'value': 'is not'}; {'id': '70', 'type': 'identifier', 'children': [], 'value': 'theme2'}; {'id': '71', 'type': 'None', 'children': []}; {'id': '72', 'type': 'expression_statement', 'children': ['73']}; {'id': '73', 'type': 'assignment', 'children': ['74', '75']}; {'id': '74', 'type': 'identifier', 'children': [], 'value': 'evidence'}; {'id': '75', 'type': 'call', 'children': ['76', '79']}; {'id': '76', 'type': 'attribute', 'children': ['77', '78']}; {'id': '77', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '78', 'type': 'identifier', 'children': [], 'value': 'node_to_evidence'}; {'id': '79', 'type': 'argument_list', 'children': ['80', '81']}; {'id': '80', 'type': 'identifier', 'children': [], 'value': 'theme1_node'}; {'id': '81', 'type': 'keyword_argument', 'children': ['82', '83']}; {'id': '82', 'type': 'identifier', 'children': [], 'value': 'is_direct'}; {'id': '83', 'type': 'True', 'children': []}; {'id': '84', 'type': 'expression_statement', 'children': ['85']}; {'id': '85', 'type': 'call', 'children': ['86', '89']}; {'id': '86', 'type': 'attribute', 'children': ['87', '88']}; {'id': '87', 'type': 'identifier', 'children': [], 'value': 'statements'}; {'id': '88', 'type': 'identifier', 'children': [], 'value': 'append'}; {'id': '89', 'type': 'argument_list', 'children': ['90']}; {'id': '90', 'type': 'call', 'children': ['91', '92']}; {'id': '91', 'type': 'identifier', 'children': [], 'value': 'Complex'}; {'id': '92', 'type': 'argument_list', 'children': ['93', '102']}; {'id': '93', 'type': 'list', 'children': ['94', '98'], 'value': '[s2a(theme1), s2a(theme2)]'}; {'id': '94', 'type': 'call', 'children': ['95', '96']}; {'id': '95', 'type': 'identifier', 'children': [], 'value': 's2a'}; {'id': '96', 'type': 'argument_list', 'children': ['97']}; {'id': '97', 'type': 'identifier', 'children': [], 'value': 'theme1'}; {'id': '98', 'type': 'call', 'children': ['99', '100']}; {'id': '99', 'type': 'identifier', 'children': [], 'value': 's2a'}; {'id': '100', 'type': 'argument_list', 'children': ['101']}; {'id': '101', 'type': 'identifier', 'children': [], 'value': 'theme2'}; {'id': '102', 'type': 'keyword_argument', 'children': ['103', '104']}; {'id': '103', 'type': 'identifier', 'children': [], 'value': 'evidence'}; {'id': '104', 'type': 'identifier', 'children': [], 'value': 'evidence'}; {'id': '105', 'type': 'return_statement', 'children': ['106']}; {'id': '106', 'type': 'identifier', 'children': [], 'value': 'statements'} | Looks for Binding events in the graph and extracts them into INDRA
statements.
In particular, looks for a Binding event node with outgoing edges
with relations Theme and Theme2 - the entities these edges point to
are the two constituents of the Complex INDRA statement. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_get_parameter_conversion_entry'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'parameter_config'}; {'id': '5', 'type': 'block', 'children': ['6', '20', '35']}; {'id': '6', 'type': 'expression_statement', 'children': ['7']}; {'id': '7', 'type': 'assignment', 'children': ['8', '9']}; {'id': '8', 'type': 'identifier', 'children': [], 'value': 'entry'}; {'id': '9', 'type': 'call', 'children': ['10', '13']}; {'id': '10', 'type': 'attribute', 'children': ['11', '12']}; {'id': '11', 'type': 'identifier', 'children': [], 'value': '_PARAM_CONVERSION_MAP'}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'get'}; {'id': '13', 'type': 'argument_list', 'children': ['14']}; {'id': '14', 'type': 'call', 'children': ['15', '18']}; {'id': '15', 'type': 'attribute', 'children': ['16', '17']}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'parameter_config'}; {'id': '17', 'type': 'identifier', 'children': [], 'value': 'get'}; {'id': '18', 'type': 'argument_list', 'children': ['19']}; {'id': '19', 'type': 'string', 'children': [], 'value': "'type'"}; {'id': '20', 'type': 'if_statement', 'children': ['21', '28']}; {'id': '21', 'type': 'boolean_operator', 'children': ['22', '25'], 'value': 'and'}; {'id': '22', 'type': 'comparison_operator', 'children': ['23', '24'], 'value': 'is'}; {'id': '23', 'type': 'identifier', 'children': [], 'value': 'entry'}; {'id': '24', 'type': 'None', 'children': []}; {'id': '25', 'type': 'comparison_operator', 'children': ['26', '27'], 'value': 'in'}; {'id': '26', 'type': 'string', 'children': [], 'value': "'enum'"}; {'id': '27', 'type': 'identifier', 'children': [], 'value': 'parameter_config'}; {'id': '28', 'type': 'block', 'children': ['29']}; {'id': '29', 'type': 'expression_statement', 'children': ['30']}; {'id': '30', 'type': 'assignment', 'children': ['31', '32']}; {'id': '31', 'type': 'identifier', 'children': [], 'value': 'entry'}; {'id': '32', 'type': 'subscript', 'children': ['33', '34']}; {'id': '33', 'type': 'identifier', 'children': [], 'value': '_PARAM_CONVERSION_MAP'}; {'id': '34', 'type': 'string', 'children': [], 'value': "'enum'"}; {'id': '35', 'type': 'return_statement', 'children': ['36']}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'entry'} | Get information needed to convert the given parameter to its API type.
Args:
parameter_config: The dictionary containing information specific to the
parameter in question. This is retrieved from request.parameters in the
method config.
Returns:
The entry from _PARAM_CONVERSION_MAP with functions/information needed to
validate and convert the given parameter from a string to the type expected
by the API. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '13']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_parse_deploy'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '9']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'typed_parameter', 'children': ['6', '7']}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'deploy_values'}; {'id': '7', 'type': 'type', 'children': ['8']}; {'id': '8', 'type': 'identifier', 'children': [], 'value': 'dict'}; {'id': '9', 'type': 'typed_parameter', 'children': ['10', '11']}; {'id': '10', 'type': 'identifier', 'children': [], 'value': 'service_config'}; {'id': '11', 'type': 'type', 'children': ['12']}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'dict'}; {'id': '13', 'type': 'block', 'children': ['14', '18', '118', '130']}; {'id': '14', 'type': 'expression_statement', 'children': ['15']}; {'id': '15', 'type': 'assignment', 'children': ['16', '17']}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'mode'}; {'id': '17', 'type': 'dictionary', 'children': []}; {'id': '18', 'type': 'for_statement', 'children': ['19', '20', '21']}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'd_value'}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'deploy_values'}; {'id': '21', 'type': 'block', 'children': ['22', '47', '71', '84', '97']}; {'id': '22', 'type': 'if_statement', 'children': ['23', '26']}; {'id': '23', 'type': 'comparison_operator', 'children': ['24', '25'], 'value': 'in'}; {'id': '24', 'type': 'string', 'children': [], 'value': "'restart_policy'"}; {'id': '25', 'type': 'identifier', 'children': [], 'value': 'd_value'}; {'id': '26', 'type': 'block', 'children': ['27', '41']}; {'id': '27', 'type': 'expression_statement', 'children': ['28']}; {'id': '28', 'type': 'assignment', 'children': ['29', '30']}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'restart_spec'}; {'id': '30', 'type': 'call', 'children': ['31', '36']}; {'id': '31', 'type': 'attribute', 'children': ['32', '35']}; {'id': '32', 'type': 'attribute', 'children': ['33', '34']}; {'id': '33', 'type': 'identifier', 'children': [], 'value': 'docker'}; {'id': '34', 'type': 'identifier', 'children': [], 'value': 'types'}; {'id': '35', 'type': 'identifier', 'children': [], 'value': 'RestartPolicy'}; {'id': '36', 'type': 'argument_list', 'children': ['37']}; {'id': '37', 'type': 'dictionary_splat', 'children': ['38']}; {'id': '38', 'type': 'subscript', 'children': ['39', '40']}; {'id': '39', 'type': 'identifier', 'children': [], 'value': 'deploy_values'}; {'id': '40', 'type': 'identifier', 'children': [], 'value': 'd_value'}; {'id': '41', 'type': 'expression_statement', 'children': ['42']}; {'id': '42', 'type': 'assignment', 'children': ['43', '46']}; {'id': '43', 'type': 'subscript', 'children': ['44', '45']}; {'id': '44', 'type': 'identifier', 'children': [], 'value': 'service_config'}; {'id': '45', 'type': 'string', 'children': [], 'value': "'restart_policy'"}; {'id': '46', 'type': 'identifier', 'children': [], 'value': 'restart_spec'}; {'id': '47', 'type': 'if_statement', 'children': ['48', '51']}; {'id': '48', 'type': 'comparison_operator', 'children': ['49', '50'], 'value': 'in'}; {'id': '49', 'type': 'string', 'children': [], 'value': "'placement'"}; {'id': '50', 'type': 'identifier', 'children': [], 'value': 'd_value'}; {'id': '51', 'type': 'block', 'children': ['52']}; {'id': '52', 'type': 'for_statement', 'children': ['53', '56', '57', '64']}; {'id': '53', 'type': 'pattern_list', 'children': ['54', '55']}; {'id': '54', 'type': 'identifier', 'children': [], 'value': 'constraints_key'}; {'id': '55', 'type': 'identifier', 'children': [], 'value': 'constraints_value'}; {'id': '56', 'type': 'line_continuation', 'children': [], 'value': '\\'}; {'id': '57', 'type': 'call', 'children': ['58', '63']}; {'id': '58', 'type': 'attribute', 'children': ['59', '62']}; {'id': '59', 'type': 'subscript', 'children': ['60', '61']}; {'id': '60', 'type': 'identifier', 'children': [], 'value': 'deploy_values'}; {'id': '61', 'type': 'identifier', 'children': [], 'value': 'd_value'}; {'id': '62', 'type': 'identifier', 'children': [], 'value': 'items'}; {'id': '63', 'type': 'argument_list', 'children': []}; {'id': '64', 'type': 'block', 'children': ['65']}; {'id': '65', 'type': 'expression_statement', 'children': ['66']}; {'id': '66', 'type': 'assignment', 'children': ['67', '70']}; {'id': '67', 'type': 'subscript', 'children': ['68', '69']}; {'id': '68', 'type': 'identifier', 'children': [], 'value': 'service_config'}; {'id': '69', 'type': 'identifier', 'children': [], 'value': 'constraints_key'}; {'id': '70', 'type': 'identifier', 'children': [], 'value': 'constraints_value'}; {'id': '71', 'type': 'if_statement', 'children': ['72', '75']}; {'id': '72', 'type': 'comparison_operator', 'children': ['73', '74'], 'value': 'in'}; {'id': '73', 'type': 'string', 'children': [], 'value': "'mode'"}; {'id': '74', 'type': 'identifier', 'children': [], 'value': 'd_value'}; {'id': '75', 'type': 'block', 'children': ['76']}; {'id': '76', 'type': 'expression_statement', 'children': ['77']}; {'id': '77', 'type': 'assignment', 'children': ['78', '81']}; {'id': '78', 'type': 'subscript', 'children': ['79', '80']}; {'id': '79', 'type': 'identifier', 'children': [], 'value': 'mode'}; {'id': '80', 'type': 'identifier', 'children': [], 'value': 'd_value'}; {'id': '81', 'type': 'subscript', 'children': ['82', '83']}; {'id': '82', 'type': 'identifier', 'children': [], 'value': 'deploy_values'}; {'id': '83', 'type': 'identifier', 'children': [], 'value': 'd_value'}; {'id': '84', 'type': 'if_statement', 'children': ['85', '88']}; {'id': '85', 'type': 'comparison_operator', 'children': ['86', '87'], 'value': 'in'}; {'id': '86', 'type': 'string', 'children': [], 'value': "'replicas'"}; {'id': '87', 'type': 'identifier', 'children': [], 'value': 'd_value'}; {'id': '88', 'type': 'block', 'children': ['89']}; {'id': '89', 'type': 'expression_statement', 'children': ['90']}; {'id': '90', 'type': 'assignment', 'children': ['91', '94']}; {'id': '91', 'type': 'subscript', 'children': ['92', '93']}; {'id': '92', 'type': 'identifier', 'children': [], 'value': 'mode'}; {'id': '93', 'type': 'identifier', 'children': [], 'value': 'd_value'}; {'id': '94', 'type': 'subscript', 'children': ['95', '96']}; {'id': '95', 'type': 'identifier', 'children': [], 'value': 'deploy_values'}; {'id': '96', 'type': 'identifier', 'children': [], 'value': 'd_value'}; {'id': '97', 'type': 'if_statement', 'children': ['98', '101']}; {'id': '98', 'type': 'comparison_operator', 'children': ['99', '100'], 'value': 'in'}; {'id': '99', 'type': 'string', 'children': [], 'value': "'resources'"}; {'id': '100', 'type': 'identifier', 'children': [], 'value': 'd_value'}; {'id': '101', 'type': 'block', 'children': ['102', '112']}; {'id': '102', 'type': 'expression_statement', 'children': ['103']}; {'id': '103', 'type': 'assignment', 'children': ['104', '105']}; {'id': '104', 'type': 'identifier', 'children': [], 'value': 'resource_spec'}; {'id': '105', 'type': 'call', 'children': ['106', '109']}; {'id': '106', 'type': 'attribute', 'children': ['107', '108']}; {'id': '107', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '108', 'type': 'identifier', 'children': [], 'value': '_parse_resources'}; {'id': '109', 'type': 'argument_list', 'children': ['110', '111']}; {'id': '110', 'type': 'identifier', 'children': [], 'value': 'deploy_values'}; {'id': '111', 'type': 'identifier', 'children': [], 'value': 'd_value'}; {'id': '112', 'type': 'expression_statement', 'children': ['113']}; {'id': '113', 'type': 'assignment', 'children': ['114', '117']}; {'id': '114', 'type': 'subscript', 'children': ['115', '116']}; {'id': '115', 'type': 'identifier', 'children': [], 'value': 'service_config'}; {'id': '116', 'type': 'string', 'children': [], 'value': "'resources'"}; {'id': '117', 'type': 'identifier', 'children': [], 'value': 'resource_spec'}; {'id': '118', 'type': 'expression_statement', 'children': ['119']}; {'id': '119', 'type': 'assignment', 'children': ['120', '121']}; {'id': '120', 'type': 'identifier', 'children': [], 'value': 'mode_spec'}; {'id': '121', 'type': 'call', 'children': ['122', '127']}; {'id': '122', 'type': 'attribute', 'children': ['123', '126']}; {'id': '123', 'type': 'attribute', 'children': ['124', '125']}; {'id': '124', 'type': 'identifier', 'children': [], 'value': 'docker'}; {'id': '125', 'type': 'identifier', 'children': [], 'value': 'types'}; {'id': '126', 'type': 'identifier', 'children': [], 'value': 'ServiceMode'}; {'id': '127', 'type': 'argument_list', 'children': ['128']}; {'id': '128', 'type': 'dictionary_splat', 'children': ['129']}; {'id': '129', 'type': 'identifier', 'children': [], 'value': 'mode'}; {'id': '130', 'type': 'expression_statement', 'children': ['131']}; {'id': '131', 'type': 'assignment', 'children': ['132', '135']}; {'id': '132', 'type': 'subscript', 'children': ['133', '134']}; {'id': '133', 'type': 'identifier', 'children': [], 'value': 'service_config'}; {'id': '134', 'type': 'string', 'children': [], 'value': "'mode'"}; {'id': '135', 'type': 'identifier', 'children': [], 'value': 'mode_spec'} | Parse deploy key.
Args:
deploy_values (dict): deploy configuration values
service_config (dict): Service configuration |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'supportsType'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'type_uri'}; {'id': '6', 'type': 'block', 'children': ['7']}; {'id': '7', 'type': 'return_statement', 'children': ['8']}; {'id': '8', 'type': '()', 'children': ['9']}; {'id': '9', 'type': 'boolean_operator', 'children': ['10', '16'], 'value': 'or'}; {'id': '10', 'type': '()', 'children': ['11']}; {'id': '11', 'type': 'comparison_operator', 'children': ['12', '13'], 'value': 'in'}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'type_uri'}; {'id': '13', 'type': 'attribute', 'children': ['14', '15']}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'type_uris'}; {'id': '16', 'type': '()', 'children': ['17']}; {'id': '17', 'type': 'boolean_operator', 'children': ['18', '21'], 'value': 'and'}; {'id': '18', 'type': 'comparison_operator', 'children': ['19', '20'], 'value': '=='}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'type_uri'}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'OPENID_2_0_TYPE'}; {'id': '21', 'type': 'call', 'children': ['22', '25']}; {'id': '22', 'type': 'attribute', 'children': ['23', '24']}; {'id': '23', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'isOPIdentifier'}; {'id': '25', 'type': 'argument_list', 'children': []} | Does this endpoint support this type?
I consider C{/server} endpoints to implicitly support C{/signon}. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '10']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_RunSingleHook'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6', '7']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'hook_cls'}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'executed_set'}; {'id': '7', 'type': 'default_parameter', 'children': ['8', '9']}; {'id': '8', 'type': 'identifier', 'children': [], 'value': 'required'}; {'id': '9', 'type': 'None', 'children': []}; {'id': '10', 'type': 'block', 'children': ['11', '17', '36', '42', '68', '74', '81']}; {'id': '11', 'type': 'if_statement', 'children': ['12', '15']}; {'id': '12', 'type': 'comparison_operator', 'children': ['13', '14'], 'value': 'in'}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'hook_cls'}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'executed_set'}; {'id': '15', 'type': 'block', 'children': ['16']}; {'id': '16', 'type': 'return_statement', 'children': []}; {'id': '17', 'type': 'for_statement', 'children': ['18', '19', '22']}; {'id': '18', 'type': 'identifier', 'children': [], 'value': 'pre_hook'}; {'id': '19', 'type': 'attribute', 'children': ['20', '21']}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'hook_cls'}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'pre'}; {'id': '22', 'type': 'block', 'children': ['23']}; {'id': '23', 'type': 'expression_statement', 'children': ['24']}; {'id': '24', 'type': 'call', 'children': ['25', '28']}; {'id': '25', 'type': 'attribute', 'children': ['26', '27']}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '27', 'type': 'identifier', 'children': [], 'value': '_RunSingleHook'}; {'id': '28', 'type': 'argument_list', 'children': ['29', '30', '31']}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'pre_hook'}; {'id': '30', 'type': 'identifier', 'children': [], 'value': 'executed_set'}; {'id': '31', 'type': 'keyword_argument', 'children': ['32', '33']}; {'id': '32', 'type': 'identifier', 'children': [], 'value': 'required'}; {'id': '33', 'type': 'attribute', 'children': ['34', '35']}; {'id': '34', 'type': 'identifier', 'children': [], 'value': 'hook_cls'}; {'id': '35', 'type': 'identifier', 'children': [], 'value': '__name__'}; {'id': '36', 'type': 'expression_statement', 'children': ['37']}; {'id': '37', 'type': 'assignment', 'children': ['38', '39']}; {'id': '38', 'type': 'identifier', 'children': [], 'value': 'cls_instance'}; {'id': '39', 'type': 'call', 'children': ['40', '41']}; {'id': '40', 'type': 'identifier', 'children': [], 'value': 'hook_cls'}; {'id': '41', 'type': 'argument_list', 'children': []}; {'id': '42', 'type': 'if_statement', 'children': ['43', '44', '56']}; {'id': '43', 'type': 'identifier', 'children': [], 'value': 'required'}; {'id': '44', 'type': 'block', 'children': ['45']}; {'id': '45', 'type': 'expression_statement', 'children': ['46']}; {'id': '46', 'type': 'call', 'children': ['47', '50']}; {'id': '47', 'type': 'attribute', 'children': ['48', '49']}; {'id': '48', 'type': 'identifier', 'children': [], 'value': 'logging'}; {'id': '49', 'type': 'identifier', 'children': [], 'value': 'debug'}; {'id': '50', 'type': 'argument_list', 'children': ['51', '52', '55']}; {'id': '51', 'type': 'string', 'children': [], 'value': '"Initializing %s, required by %s"'}; {'id': '52', 'type': 'attribute', 'children': ['53', '54']}; {'id': '53', 'type': 'identifier', 'children': [], 'value': 'hook_cls'}; {'id': '54', 'type': 'identifier', 'children': [], 'value': '__name__'}; {'id': '55', 'type': 'identifier', 'children': [], 'value': 'required'}; {'id': '56', 'type': 'else_clause', 'children': ['57']}; {'id': '57', 'type': 'block', 'children': ['58']}; {'id': '58', 'type': 'expression_statement', 'children': ['59']}; {'id': '59', 'type': 'call', 'children': ['60', '63']}; {'id': '60', 'type': 'attribute', 'children': ['61', '62']}; {'id': '61', 'type': 'identifier', 'children': [], 'value': 'logging'}; {'id': '62', 'type': 'identifier', 'children': [], 'value': 'debug'}; {'id': '63', 'type': 'argument_list', 'children': ['64', '65']}; {'id': '64', 'type': 'string', 'children': [], 'value': '"Initializing %s"'}; {'id': '65', 'type': 'attribute', 'children': ['66', '67']}; {'id': '66', 'type': 'identifier', 'children': [], 'value': 'hook_cls'}; {'id': '67', 'type': 'identifier', 'children': [], 'value': '__name__'}; {'id': '68', 'type': 'expression_statement', 'children': ['69']}; {'id': '69', 'type': 'call', 'children': ['70', '73']}; {'id': '70', 'type': 'attribute', 'children': ['71', '72']}; {'id': '71', 'type': 'identifier', 'children': [], 'value': 'cls_instance'}; {'id': '72', 'type': 'identifier', 'children': [], 'value': 'Run'}; {'id': '73', 'type': 'argument_list', 'children': []}; {'id': '74', 'type': 'expression_statement', 'children': ['75']}; {'id': '75', 'type': 'call', 'children': ['76', '79']}; {'id': '76', 'type': 'attribute', 'children': ['77', '78']}; {'id': '77', 'type': 'identifier', 'children': [], 'value': 'executed_set'}; {'id': '78', 'type': 'identifier', 'children': [], 'value': 'add'}; {'id': '79', 'type': 'argument_list', 'children': ['80']}; {'id': '80', 'type': 'identifier', 'children': [], 'value': 'hook_cls'}; {'id': '81', 'type': 'if_statement', 'children': ['82', '87']}; {'id': '82', 'type': 'comparison_operator', 'children': ['83', '84'], 'value': 'not in'}; {'id': '83', 'type': 'identifier', 'children': [], 'value': 'hook_cls'}; {'id': '84', 'type': 'attribute', 'children': ['85', '86']}; {'id': '85', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '86', 'type': 'identifier', 'children': [], 'value': 'already_run_once'}; {'id': '87', 'type': 'block', 'children': ['88', '94']}; {'id': '88', 'type': 'expression_statement', 'children': ['89']}; {'id': '89', 'type': 'call', 'children': ['90', '93']}; {'id': '90', 'type': 'attribute', 'children': ['91', '92']}; {'id': '91', 'type': 'identifier', 'children': [], 'value': 'cls_instance'}; {'id': '92', 'type': 'identifier', 'children': [], 'value': 'RunOnce'}; {'id': '93', 'type': 'argument_list', 'children': []}; {'id': '94', 'type': 'expression_statement', 'children': ['95']}; {'id': '95', 'type': 'call', 'children': ['96', '101']}; {'id': '96', 'type': 'attribute', 'children': ['97', '100']}; {'id': '97', 'type': 'attribute', 'children': ['98', '99']}; {'id': '98', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '99', 'type': 'identifier', 'children': [], 'value': 'already_run_once'}; {'id': '100', 'type': 'identifier', 'children': [], 'value': 'add'}; {'id': '101', 'type': 'argument_list', 'children': ['102']}; {'id': '102', 'type': 'identifier', 'children': [], 'value': 'hook_cls'} | Run the single hook specified by resolving all its prerequisites. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'PyParseRangeCheck'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'lower_bound'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'upper_bound'}; {'id': '6', 'type': 'block', 'children': ['7', '66']}; {'id': '7', 'type': 'function_definition', 'children': ['8', '9', '13']}; {'id': '8', 'type': 'function_name', 'children': [], 'value': 'CheckRange'}; {'id': '9', 'type': 'parameters', 'children': ['10', '11', '12']}; {'id': '10', 'type': 'identifier', 'children': [], 'value': 'string'}; {'id': '11', 'type': 'identifier', 'children': [], 'value': 'location'}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'tokens'}; {'id': '13', 'type': 'block', 'children': ['14', '30', '48']}; {'id': '14', 'type': 'try_statement', 'children': ['15', '22']}; {'id': '15', 'type': 'block', 'children': ['16']}; {'id': '16', 'type': 'expression_statement', 'children': ['17']}; {'id': '17', 'type': 'assignment', 'children': ['18', '19']}; {'id': '18', 'type': 'identifier', 'children': [], 'value': 'check_number'}; {'id': '19', 'type': 'subscript', 'children': ['20', '21']}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'tokens'}; {'id': '21', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '22', 'type': 'except_clause', 'children': ['23', '24']}; {'id': '23', 'type': 'identifier', 'children': [], 'value': 'IndexError'}; {'id': '24', 'type': 'block', 'children': ['25']}; {'id': '25', 'type': 'expression_statement', 'children': ['26']}; {'id': '26', 'type': 'assignment', 'children': ['27', '28']}; {'id': '27', 'type': 'identifier', 'children': [], 'value': 'check_number'}; {'id': '28', 'type': 'unary_operator', 'children': ['29'], 'value': '-'}; {'id': '29', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '30', 'type': 'if_statement', 'children': ['31', '34']}; {'id': '31', 'type': 'comparison_operator', 'children': ['32', '33'], 'value': '<'}; {'id': '32', 'type': 'identifier', 'children': [], 'value': 'check_number'}; {'id': '33', 'type': 'identifier', 'children': [], 'value': 'lower_bound'}; {'id': '34', 'type': 'block', 'children': ['35']}; {'id': '35', 'type': 'raise_statement', 'children': ['36']}; {'id': '36', 'type': 'call', 'children': ['37', '40']}; {'id': '37', 'type': 'attribute', 'children': ['38', '39']}; {'id': '38', 'type': 'identifier', 'children': [], 'value': 'pyparsing'}; {'id': '39', 'type': 'identifier', 'children': [], 'value': 'ParseException'}; {'id': '40', 'type': 'argument_list', 'children': ['41']}; {'id': '41', 'type': 'call', 'children': ['42', '45']}; {'id': '42', 'type': 'attribute', 'children': ['43', '44']}; {'id': '43', 'type': 'string', 'children': [], 'value': "'Value: {0:d} precedes lower bound: {1:d}'"}; {'id': '44', 'type': 'identifier', 'children': [], 'value': 'format'}; {'id': '45', 'type': 'argument_list', 'children': ['46', '47']}; {'id': '46', 'type': 'identifier', 'children': [], 'value': 'check_number'}; {'id': '47', 'type': 'identifier', 'children': [], 'value': 'lower_bound'}; {'id': '48', 'type': 'if_statement', 'children': ['49', '52']}; {'id': '49', 'type': 'comparison_operator', 'children': ['50', '51'], 'value': '>'}; {'id': '50', 'type': 'identifier', 'children': [], 'value': 'check_number'}; {'id': '51', 'type': 'identifier', 'children': [], 'value': 'upper_bound'}; {'id': '52', 'type': 'block', 'children': ['53']}; {'id': '53', 'type': 'raise_statement', 'children': ['54']}; {'id': '54', 'type': 'call', 'children': ['55', '58']}; {'id': '55', 'type': 'attribute', 'children': ['56', '57']}; {'id': '56', 'type': 'identifier', 'children': [], 'value': 'pyparsing'}; {'id': '57', 'type': 'identifier', 'children': [], 'value': 'ParseException'}; {'id': '58', 'type': 'argument_list', 'children': ['59']}; {'id': '59', 'type': 'call', 'children': ['60', '63']}; {'id': '60', 'type': 'attribute', 'children': ['61', '62']}; {'id': '61', 'type': 'string', 'children': [], 'value': "'Value: {0:d} exceeds upper bound: {1:d}'"}; {'id': '62', 'type': 'identifier', 'children': [], 'value': 'format'}; {'id': '63', 'type': 'argument_list', 'children': ['64', '65']}; {'id': '64', 'type': 'identifier', 'children': [], 'value': 'check_number'}; {'id': '65', 'type': 'identifier', 'children': [], 'value': 'upper_bound'}; {'id': '66', 'type': 'return_statement', 'children': ['67']}; {'id': '67', 'type': 'identifier', 'children': [], 'value': 'CheckRange'} | Verify that a number is within a defined range.
This is a callback method for pyparsing setParseAction
that verifies that a read number is within a certain range.
To use this method it needs to be defined as a callback method
in setParseAction with the upper and lower bound set as parameters.
Args:
lower_bound (int): lower bound of the range.
upper_bound (int): upper bound of the range.
Returns:
Function: callback method that can be used by pyparsing setParseAction. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'read_hierarchy'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'fid'}; {'id': '6', 'type': 'block', 'children': ['7', '16', '85', '94']}; {'id': '7', 'type': 'expression_statement', 'children': ['8']}; {'id': '8', 'type': 'assignment', 'children': ['9', '10']}; {'id': '9', 'type': 'identifier', 'children': [], 'value': 'lin'}; {'id': '10', 'type': 'call', 'children': ['11', '14']}; {'id': '11', 'type': 'attribute', 'children': ['12', '13']}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'read_line'}; {'id': '14', 'type': 'argument_list', 'children': ['15']}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'fid'}; {'id': '16', 'type': 'while_statement', 'children': ['17', '20']}; {'id': '17', 'type': 'comparison_operator', 'children': ['18', '19'], 'value': '!='}; {'id': '18', 'type': 'identifier', 'children': [], 'value': 'lin'}; {'id': '19', 'type': 'string', 'children': [], 'value': "'end'"}; {'id': '20', 'type': 'block', 'children': ['21', '29', '76']}; {'id': '21', 'type': 'expression_statement', 'children': ['22']}; {'id': '22', 'type': 'assignment', 'children': ['23', '24']}; {'id': '23', 'type': 'identifier', 'children': [], 'value': 'parts'}; {'id': '24', 'type': 'call', 'children': ['25', '28']}; {'id': '25', 'type': 'attribute', 'children': ['26', '27']}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'lin'}; {'id': '27', 'type': 'identifier', 'children': [], 'value': 'split'}; {'id': '28', 'type': 'argument_list', 'children': []}; {'id': '29', 'type': 'if_statement', 'children': ['30', '33']}; {'id': '30', 'type': 'comparison_operator', 'children': ['31', '32'], 'value': '!='}; {'id': '31', 'type': 'identifier', 'children': [], 'value': 'lin'}; {'id': '32', 'type': 'string', 'children': [], 'value': "'begin'"}; {'id': '33', 'type': 'block', 'children': ['34', '45']}; {'id': '34', 'type': 'expression_statement', 'children': ['35']}; {'id': '35', 'type': 'assignment', 'children': ['36', '37']}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'ind'}; {'id': '37', 'type': 'call', 'children': ['38', '41']}; {'id': '38', 'type': 'attribute', 'children': ['39', '40']}; {'id': '39', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '40', 'type': 'identifier', 'children': [], 'value': 'get_index_by_name'}; {'id': '41', 'type': 'argument_list', 'children': ['42']}; {'id': '42', 'type': 'subscript', 'children': ['43', '44']}; {'id': '43', 'type': 'identifier', 'children': [], 'value': 'parts'}; {'id': '44', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '45', 'type': 'for_statement', 'children': ['46', '47', '55']}; {'id': '46', 'type': 'identifier', 'children': [], 'value': 'i'}; {'id': '47', 'type': 'call', 'children': ['48', '49']}; {'id': '48', 'type': 'identifier', 'children': [], 'value': 'range'}; {'id': '49', 'type': 'argument_list', 'children': ['50', '51']}; {'id': '50', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '51', 'type': 'call', 'children': ['52', '53']}; {'id': '52', 'type': 'identifier', 'children': [], 'value': 'len'}; {'id': '53', 'type': 'argument_list', 'children': ['54']}; {'id': '54', 'type': 'identifier', 'children': [], 'value': 'parts'}; {'id': '55', 'type': 'block', 'children': ['56']}; {'id': '56', 'type': 'expression_statement', 'children': ['57']}; {'id': '57', 'type': 'call', 'children': ['58', '67']}; {'id': '58', 'type': 'attribute', 'children': ['59', '66']}; {'id': '59', 'type': 'attribute', 'children': ['60', '65']}; {'id': '60', 'type': 'subscript', 'children': ['61', '64']}; {'id': '61', 'type': 'attribute', 'children': ['62', '63']}; {'id': '62', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '63', 'type': 'identifier', 'children': [], 'value': 'vertices'}; {'id': '64', 'type': 'identifier', 'children': [], 'value': 'ind'}; {'id': '65', 'type': 'identifier', 'children': [], 'value': 'children'}; {'id': '66', 'type': 'identifier', 'children': [], 'value': 'append'}; {'id': '67', 'type': 'argument_list', 'children': ['68']}; {'id': '68', 'type': 'call', 'children': ['69', '72']}; {'id': '69', 'type': 'attribute', 'children': ['70', '71']}; {'id': '70', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '71', 'type': 'identifier', 'children': [], 'value': 'get_index_by_name'}; {'id': '72', 'type': 'argument_list', 'children': ['73']}; {'id': '73', 'type': 'subscript', 'children': ['74', '75']}; {'id': '74', 'type': 'identifier', 'children': [], 'value': 'parts'}; {'id': '75', 'type': 'identifier', 'children': [], 'value': 'i'}; {'id': '76', 'type': 'expression_statement', 'children': ['77']}; {'id': '77', 'type': 'assignment', 'children': ['78', '79']}; {'id': '78', 'type': 'identifier', 'children': [], 'value': 'lin'}; {'id': '79', 'type': 'call', 'children': ['80', '83']}; {'id': '80', 'type': 'attribute', 'children': ['81', '82']}; {'id': '81', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '82', 'type': 'identifier', 'children': [], 'value': 'read_line'}; {'id': '83', 'type': 'argument_list', 'children': ['84']}; {'id': '84', 'type': 'identifier', 'children': [], 'value': 'fid'}; {'id': '85', 'type': 'expression_statement', 'children': ['86']}; {'id': '86', 'type': 'assignment', 'children': ['87', '88']}; {'id': '87', 'type': 'identifier', 'children': [], 'value': 'lin'}; {'id': '88', 'type': 'call', 'children': ['89', '92']}; {'id': '89', 'type': 'attribute', 'children': ['90', '91']}; {'id': '90', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '91', 'type': 'identifier', 'children': [], 'value': 'read_line'}; {'id': '92', 'type': 'argument_list', 'children': ['93']}; {'id': '93', 'type': 'identifier', 'children': [], 'value': 'fid'}; {'id': '94', 'type': 'return_statement', 'children': ['95']}; {'id': '95', 'type': 'identifier', 'children': [], 'value': 'lin'} | Read hierarchy information from acclaim skeleton file stream. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '8']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'show_gateway_device'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'gateway_device_id'}; {'id': '6', 'type': 'dictionary_splat_pattern', 'children': ['7']}; {'id': '7', 'type': 'identifier', 'children': [], 'value': '_params'}; {'id': '8', 'type': 'block', 'children': ['9']}; {'id': '9', 'type': 'return_statement', 'children': ['10']}; {'id': '10', 'type': 'call', 'children': ['11', '14']}; {'id': '11', 'type': 'attribute', 'children': ['12', '13']}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'get'}; {'id': '14', 'type': 'argument_list', 'children': ['15', '20']}; {'id': '15', 'type': 'binary_operator', 'children': ['16', '19'], 'value': '%'}; {'id': '16', 'type': 'attribute', 'children': ['17', '18']}; {'id': '17', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '18', 'type': 'identifier', 'children': [], 'value': 'gateway_device_path'}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'gateway_device_id'}; {'id': '20', 'type': 'keyword_argument', 'children': ['21', '22']}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'params'}; {'id': '22', 'type': 'identifier', 'children': [], 'value': '_params'} | Fetch a gateway device. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'restore'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'block', 'children': ['6', '18', '30']}; {'id': '6', 'type': 'expression_statement', 'children': ['7']}; {'id': '7', 'type': 'call', 'children': ['8', '11']}; {'id': '8', 'type': 'attribute', 'children': ['9', '10']}; {'id': '9', 'type': 'identifier', 'children': [], 'value': 'signal'}; {'id': '10', 'type': 'identifier', 'children': [], 'value': 'signal'}; {'id': '11', 'type': 'argument_list', 'children': ['12', '15']}; {'id': '12', 'type': 'attribute', 'children': ['13', '14']}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'signal'}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'SIGINT'}; {'id': '15', 'type': 'attribute', 'children': ['16', '17']}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '17', 'type': 'identifier', 'children': [], 'value': 'original_sigint'}; {'id': '18', 'type': 'expression_statement', 'children': ['19']}; {'id': '19', 'type': 'call', 'children': ['20', '23']}; {'id': '20', 'type': 'attribute', 'children': ['21', '22']}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'signal'}; {'id': '22', 'type': 'identifier', 'children': [], 'value': 'signal'}; {'id': '23', 'type': 'argument_list', 'children': ['24', '27']}; {'id': '24', 'type': 'attribute', 'children': ['25', '26']}; {'id': '25', 'type': 'identifier', 'children': [], 'value': 'signal'}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'SIGTERM'}; {'id': '27', 'type': 'attribute', 'children': ['28', '29']}; {'id': '28', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'original_sigterm'}; {'id': '30', 'type': 'if_statement', 'children': ['31', '36']}; {'id': '31', 'type': 'comparison_operator', 'children': ['32', '35'], 'value': '=='}; {'id': '32', 'type': 'attribute', 'children': ['33', '34']}; {'id': '33', 'type': 'identifier', 'children': [], 'value': 'os'}; {'id': '34', 'type': 'identifier', 'children': [], 'value': 'name'}; {'id': '35', 'type': 'string', 'children': [], 'value': "'nt'"}; {'id': '36', 'type': 'block', 'children': ['37']}; {'id': '37', 'type': 'expression_statement', 'children': ['38']}; {'id': '38', 'type': 'call', 'children': ['39', '42']}; {'id': '39', 'type': 'attribute', 'children': ['40', '41']}; {'id': '40', 'type': 'identifier', 'children': [], 'value': 'signal'}; {'id': '41', 'type': 'identifier', 'children': [], 'value': 'signal'}; {'id': '42', 'type': 'argument_list', 'children': ['43', '46']}; {'id': '43', 'type': 'attribute', 'children': ['44', '45']}; {'id': '44', 'type': 'identifier', 'children': [], 'value': 'signal'}; {'id': '45', 'type': 'identifier', 'children': [], 'value': 'SIGBREAK'}; {'id': '46', 'type': 'attribute', 'children': ['47', '48']}; {'id': '47', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '48', 'type': 'identifier', 'children': [], 'value': 'original_sigbreak'} | Restore signal handlers to their original settings. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '13']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'post'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '8', '11']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'url'}; {'id': '5', 'type': 'default_parameter', 'children': ['6', '7']}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'data'}; {'id': '7', 'type': 'None', 'children': []}; {'id': '8', 'type': 'default_parameter', 'children': ['9', '10']}; {'id': '9', 'type': 'identifier', 'children': [], 'value': 'json'}; {'id': '10', 'type': 'None', 'children': []}; {'id': '11', 'type': 'dictionary_splat_pattern', 'children': ['12']}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'kwargs'}; {'id': '13', 'type': 'block', 'children': ['14', '19', '36', '44', '57', '62']}; {'id': '14', 'type': 'expression_statement', 'children': ['15']}; {'id': '15', 'type': 'call', 'children': ['16', '17']}; {'id': '16', 'type': 'identifier', 'children': [], 'value': '_set_content_type'}; {'id': '17', 'type': 'argument_list', 'children': ['18']}; {'id': '18', 'type': 'identifier', 'children': [], 'value': 'kwargs'}; {'id': '19', 'type': 'if_statement', 'children': ['20', '28']}; {'id': '20', 'type': 'boolean_operator', 'children': ['21', '25'], 'value': 'and'}; {'id': '21', 'type': 'call', 'children': ['22', '23']}; {'id': '22', 'type': 'identifier', 'children': [], 'value': '_content_type_is_json'}; {'id': '23', 'type': 'argument_list', 'children': ['24']}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'kwargs'}; {'id': '25', 'type': 'comparison_operator', 'children': ['26', '27'], 'value': 'is not'}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'data'}; {'id': '27', 'type': 'None', 'children': []}; {'id': '28', 'type': 'block', 'children': ['29']}; {'id': '29', 'type': 'expression_statement', 'children': ['30']}; {'id': '30', 'type': 'assignment', 'children': ['31', '32']}; {'id': '31', 'type': 'identifier', 'children': [], 'value': 'data'}; {'id': '32', 'type': 'call', 'children': ['33', '34']}; {'id': '33', 'type': 'identifier', 'children': [], 'value': 'dumps'}; {'id': '34', 'type': 'argument_list', 'children': ['35']}; {'id': '35', 'type': 'identifier', 'children': [], 'value': 'data'}; {'id': '36', 'type': 'expression_statement', 'children': ['37']}; {'id': '37', 'type': 'call', 'children': ['38', '39']}; {'id': '38', 'type': 'identifier', 'children': [], 'value': '_log_request'}; {'id': '39', 'type': 'argument_list', 'children': ['40', '41', '42', '43']}; {'id': '40', 'type': 'string', 'children': [], 'value': "'POST'"}; {'id': '41', 'type': 'identifier', 'children': [], 'value': 'url'}; {'id': '42', 'type': 'identifier', 'children': [], 'value': 'kwargs'}; {'id': '43', 'type': 'identifier', 'children': [], 'value': 'data'}; {'id': '44', 'type': 'expression_statement', 'children': ['45']}; {'id': '45', 'type': 'assignment', 'children': ['46', '47']}; {'id': '46', 'type': 'identifier', 'children': [], 'value': 'response'}; {'id': '47', 'type': 'call', 'children': ['48', '51']}; {'id': '48', 'type': 'attribute', 'children': ['49', '50']}; {'id': '49', 'type': 'identifier', 'children': [], 'value': 'requests'}; {'id': '50', 'type': 'identifier', 'children': [], 'value': 'post'}; {'id': '51', 'type': 'argument_list', 'children': ['52', '53', '54', '55']}; {'id': '52', 'type': 'identifier', 'children': [], 'value': 'url'}; {'id': '53', 'type': 'identifier', 'children': [], 'value': 'data'}; {'id': '54', 'type': 'identifier', 'children': [], 'value': 'json'}; {'id': '55', 'type': 'dictionary_splat', 'children': ['56']}; {'id': '56', 'type': 'identifier', 'children': [], 'value': 'kwargs'}; {'id': '57', 'type': 'expression_statement', 'children': ['58']}; {'id': '58', 'type': 'call', 'children': ['59', '60']}; {'id': '59', 'type': 'identifier', 'children': [], 'value': '_log_response'}; {'id': '60', 'type': 'argument_list', 'children': ['61']}; {'id': '61', 'type': 'identifier', 'children': [], 'value': 'response'}; {'id': '62', 'type': 'return_statement', 'children': ['63']}; {'id': '63', 'type': 'identifier', 'children': [], 'value': 'response'} | A wrapper for ``requests.post``. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'all'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'block', 'children': ['6', '12']}; {'id': '6', 'type': 'expression_statement', 'children': ['7']}; {'id': '7', 'type': 'call', 'children': ['8', '11']}; {'id': '8', 'type': 'attribute', 'children': ['9', '10']}; {'id': '9', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '10', 'type': 'identifier', 'children': [], 'value': '_check_layout'}; {'id': '11', 'type': 'argument_list', 'children': []}; {'id': '12', 'type': 'return_statement', 'children': ['13']}; {'id': '13', 'type': 'call', 'children': ['14', '15']}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'LayoutSlice'}; {'id': '15', 'type': 'argument_list', 'children': ['16', '19']}; {'id': '16', 'type': 'attribute', 'children': ['17', '18']}; {'id': '17', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '18', 'type': 'identifier', 'children': [], 'value': 'layout'}; {'id': '19', 'type': 'call', 'children': ['20', '21']}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'slice'}; {'id': '21', 'type': 'argument_list', 'children': ['22', '23', '31']}; {'id': '22', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '23', 'type': 'call', 'children': ['24', '25']}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'len'}; {'id': '25', 'type': 'argument_list', 'children': ['26']}; {'id': '26', 'type': 'attribute', 'children': ['27', '30']}; {'id': '27', 'type': 'attribute', 'children': ['28', '29']}; {'id': '28', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'layout'}; {'id': '30', 'type': 'identifier', 'children': [], 'value': 'fields'}; {'id': '31', 'type': 'integer', 'children': [], 'value': '1'} | Returns all layout objects of first level of depth |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '10']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'get_one'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'default_parameter', 'children': ['6', '7']}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'fields'}; {'id': '7', 'type': 'call', 'children': ['8', '9']}; {'id': '8', 'type': 'identifier', 'children': [], 'value': 'list'}; {'id': '9', 'type': 'argument_list', 'children': []}; {'id': '10', 'type': 'block', 'children': ['11', '45', '54', '61', '71', '81']}; {'id': '11', 'type': 'expression_statement', 'children': ['12']}; {'id': '12', 'type': 'assignment', 'children': ['13', '14']}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'response'}; {'id': '14', 'type': 'call', 'children': ['15', '20']}; {'id': '15', 'type': 'attribute', 'children': ['16', '19']}; {'id': '16', 'type': 'attribute', 'children': ['17', '18']}; {'id': '17', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '18', 'type': 'identifier', 'children': [], 'value': 'session'}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'get'}; {'id': '20', 'type': 'argument_list', 'children': ['21', '26']}; {'id': '21', 'type': 'call', 'children': ['22', '25']}; {'id': '22', 'type': 'attribute', 'children': ['23', '24']}; {'id': '23', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '24', 'type': 'identifier', 'children': [], 'value': '_get_table_url'}; {'id': '25', 'type': 'argument_list', 'children': []}; {'id': '26', 'type': 'keyword_argument', 'children': ['27', '28']}; {'id': '27', 'type': 'identifier', 'children': [], 'value': 'params'}; {'id': '28', 'type': 'call', 'children': ['29', '32']}; {'id': '29', 'type': 'attribute', 'children': ['30', '31']}; {'id': '30', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '31', 'type': 'identifier', 'children': [], 'value': '_get_formatted_query'}; {'id': '32', 'type': 'argument_list', 'children': ['33', '34', '37', '42']}; {'id': '33', 'type': 'identifier', 'children': [], 'value': 'fields'}; {'id': '34', 'type': 'keyword_argument', 'children': ['35', '36']}; {'id': '35', 'type': 'identifier', 'children': [], 'value': 'limit'}; {'id': '36', 'type': 'None', 'children': []}; {'id': '37', 'type': 'keyword_argument', 'children': ['38', '39']}; {'id': '38', 'type': 'identifier', 'children': [], 'value': 'order_by'}; {'id': '39', 'type': 'call', 'children': ['40', '41']}; {'id': '40', 'type': 'identifier', 'children': [], 'value': 'list'}; {'id': '41', 'type': 'argument_list', 'children': []}; {'id': '42', 'type': 'keyword_argument', 'children': ['43', '44']}; {'id': '43', 'type': 'identifier', 'children': [], 'value': 'offset'}; {'id': '44', 'type': 'None', 'children': []}; {'id': '45', 'type': 'expression_statement', 'children': ['46']}; {'id': '46', 'type': 'assignment', 'children': ['47', '48']}; {'id': '47', 'type': 'identifier', 'children': [], 'value': 'content'}; {'id': '48', 'type': 'call', 'children': ['49', '52']}; {'id': '49', 'type': 'attribute', 'children': ['50', '51']}; {'id': '50', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '51', 'type': 'identifier', 'children': [], 'value': '_get_content'}; {'id': '52', 'type': 'argument_list', 'children': ['53']}; {'id': '53', 'type': 'identifier', 'children': [], 'value': 'response'}; {'id': '54', 'type': 'expression_statement', 'children': ['55']}; {'id': '55', 'type': 'assignment', 'children': ['56', '57']}; {'id': '56', 'type': 'identifier', 'children': [], 'value': 'l'}; {'id': '57', 'type': 'call', 'children': ['58', '59']}; {'id': '58', 'type': 'identifier', 'children': [], 'value': 'len'}; {'id': '59', 'type': 'argument_list', 'children': ['60']}; {'id': '60', 'type': 'identifier', 'children': [], 'value': 'content'}; {'id': '61', 'type': 'if_statement', 'children': ['62', '65']}; {'id': '62', 'type': 'comparison_operator', 'children': ['63', '64'], 'value': '>'}; {'id': '63', 'type': 'identifier', 'children': [], 'value': 'l'}; {'id': '64', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '65', 'type': 'block', 'children': ['66']}; {'id': '66', 'type': 'raise_statement', 'children': ['67']}; {'id': '67', 'type': 'call', 'children': ['68', '69']}; {'id': '68', 'type': 'identifier', 'children': [], 'value': 'MultipleResults'}; {'id': '69', 'type': 'argument_list', 'children': ['70']}; {'id': '70', 'type': 'string', 'children': [], 'value': "'Multiple results for get_one()'"}; {'id': '71', 'type': 'if_statement', 'children': ['72', '78']}; {'id': '72', 'type': 'comparison_operator', 'children': ['73', '77'], 'value': '=='}; {'id': '73', 'type': 'call', 'children': ['74', '75']}; {'id': '74', 'type': 'identifier', 'children': [], 'value': 'len'}; {'id': '75', 'type': 'argument_list', 'children': ['76']}; {'id': '76', 'type': 'identifier', 'children': [], 'value': 'content'}; {'id': '77', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '78', 'type': 'block', 'children': ['79']}; {'id': '79', 'type': 'return_statement', 'children': ['80']}; {'id': '80', 'type': 'dictionary', 'children': []}; {'id': '81', 'type': 'return_statement', 'children': ['82']}; {'id': '82', 'type': 'subscript', 'children': ['83', '84']}; {'id': '83', 'type': 'identifier', 'children': [], 'value': 'content'}; {'id': '84', 'type': 'integer', 'children': [], 'value': '0'} | Convenience function for queries returning only one result. Validates response before returning.
:param fields: List of fields to return in the result
:raise:
:MultipleResults: if more than one match is found
:return:
- Record content |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '4']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'init_logging'}; {'id': '3', 'type': 'parameters', 'children': []}; {'id': '4', 'type': 'block', 'children': ['5', '11']}; {'id': '5', 'type': 'expression_statement', 'children': ['6']}; {'id': '6', 'type': 'assignment', 'children': ['7', '8']}; {'id': '7', 'type': 'identifier', 'children': [], 'value': 'fmt'}; {'id': '8', 'type': 'concatenated_string', 'children': ['9', '10']}; {'id': '9', 'type': 'string', 'children': [], 'value': "'%(asctime)s.%(msecs)03d | %(name)-60s | %(levelname)-7s '"}; {'id': '10', 'type': 'string', 'children': [], 'value': "'| %(message)s'"}; {'id': '11', 'type': 'expression_statement', 'children': ['12']}; {'id': '12', 'type': 'call', 'children': ['13', '16']}; {'id': '13', 'type': 'attribute', 'children': ['14', '15']}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'logging'}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'basicConfig'}; {'id': '16', 'type': 'argument_list', 'children': ['17', '20', '23']}; {'id': '17', 'type': 'keyword_argument', 'children': ['18', '19']}; {'id': '18', 'type': 'identifier', 'children': [], 'value': 'format'}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'fmt'}; {'id': '20', 'type': 'keyword_argument', 'children': ['21', '22']}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'datefmt'}; {'id': '22', 'type': 'string', 'children': [], 'value': "'%H:%M:%S'"}; {'id': '23', 'type': 'keyword_argument', 'children': ['24', '25']}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'level'}; {'id': '25', 'type': 'attribute', 'children': ['26', '27']}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'logging'}; {'id': '27', 'type': 'identifier', 'children': [], 'value': 'DEBUG'} | Initialise Python logging. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '11']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'frequencies_plot'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '8']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'default_parameter', 'children': ['6', '7']}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'xmin'}; {'id': '7', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '8', 'type': 'default_parameter', 'children': ['9', '10']}; {'id': '9', 'type': 'identifier', 'children': [], 'value': 'xmax'}; {'id': '10', 'type': 'integer', 'children': [], 'value': '200'}; {'id': '11', 'type': 'block', 'children': ['12', '39']}; {'id': '12', 'type': 'expression_statement', 'children': ['13']}; {'id': '13', 'type': 'assignment', 'children': ['14', '15']}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'helptext'}; {'id': '15', 'type': 'assignment', 'children': ['16', '17']}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'pconfig'}; {'id': '17', 'type': 'dictionary', 'children': ['18', '21', '24', '27', '30', '33', '36']}; {'id': '18', 'type': 'pair', 'children': ['19', '20']}; {'id': '19', 'type': 'string', 'children': [], 'value': "'id'"}; {'id': '20', 'type': 'string', 'children': [], 'value': "'Jellyfish_kmer_plot'"}; {'id': '21', 'type': 'pair', 'children': ['22', '23']}; {'id': '22', 'type': 'string', 'children': [], 'value': "'title'"}; {'id': '23', 'type': 'string', 'children': [], 'value': "'Jellyfish: K-mer plot'"}; {'id': '24', 'type': 'pair', 'children': ['25', '26']}; {'id': '25', 'type': 'string', 'children': [], 'value': "'ylab'"}; {'id': '26', 'type': 'string', 'children': [], 'value': "'Counts'"}; {'id': '27', 'type': 'pair', 'children': ['28', '29']}; {'id': '28', 'type': 'string', 'children': [], 'value': "'xlab'"}; {'id': '29', 'type': 'string', 'children': [], 'value': "'k-mer frequency'"}; {'id': '30', 'type': 'pair', 'children': ['31', '32']}; {'id': '31', 'type': 'string', 'children': [], 'value': "'xDecimals'"}; {'id': '32', 'type': 'False', 'children': []}; {'id': '33', 'type': 'pair', 'children': ['34', '35']}; {'id': '34', 'type': 'string', 'children': [], 'value': "'xmin'"}; {'id': '35', 'type': 'identifier', 'children': [], 'value': 'xmin'}; {'id': '36', 'type': 'pair', 'children': ['37', '38']}; {'id': '37', 'type': 'string', 'children': [], 'value': "'xmax'"}; {'id': '38', 'type': 'identifier', 'children': [], 'value': 'xmax'}; {'id': '39', 'type': 'expression_statement', 'children': ['40']}; {'id': '40', 'type': 'call', 'children': ['41', '44']}; {'id': '41', 'type': 'attribute', 'children': ['42', '43']}; {'id': '42', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '43', 'type': 'identifier', 'children': [], 'value': 'add_section'}; {'id': '44', 'type': 'argument_list', 'children': ['45', '48', '51', '54']}; {'id': '45', 'type': 'keyword_argument', 'children': ['46', '47']}; {'id': '46', 'type': 'identifier', 'children': [], 'value': 'anchor'}; {'id': '47', 'type': 'string', 'children': [], 'value': "'jellyfish_kmer_plot'"}; {'id': '48', 'type': 'keyword_argument', 'children': ['49', '50']}; {'id': '49', 'type': 'identifier', 'children': [], 'value': 'description'}; {'id': '50', 'type': 'string', 'children': [], 'value': "'The K-mer plot lets you estimate library complexity and coverage from k-mer content.'"}; {'id': '51', 'type': 'keyword_argument', 'children': ['52', '53']}; {'id': '52', 'type': 'identifier', 'children': [], 'value': 'helptext'}; {'id': '53', 'type': 'identifier', 'children': [], 'value': 'helptext'}; {'id': '54', 'type': 'keyword_argument', 'children': ['55', '56']}; {'id': '55', 'type': 'identifier', 'children': [], 'value': 'plot'}; {'id': '56', 'type': 'call', 'children': ['57', '60']}; {'id': '57', 'type': 'attribute', 'children': ['58', '59']}; {'id': '58', 'type': 'identifier', 'children': [], 'value': 'linegraph'}; {'id': '59', 'type': 'identifier', 'children': [], 'value': 'plot'}; {'id': '60', 'type': 'argument_list', 'children': ['61', '64']}; {'id': '61', 'type': 'attribute', 'children': ['62', '63']}; {'id': '62', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '63', 'type': 'identifier', 'children': [], 'value': 'jellyfish_data'}; {'id': '64', 'type': 'identifier', 'children': [], 'value': 'pconfig'} | Generate the qualities plot |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'get_shortcut'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'name'}; {'id': '6', 'type': 'block', 'children': ['7', '16', '25', '31']}; {'id': '7', 'type': 'expression_statement', 'children': ['8']}; {'id': '8', 'type': 'assignment', 'children': ['9', '10']}; {'id': '9', 'type': 'identifier', 'children': [], 'value': 'name'}; {'id': '10', 'type': 'call', 'children': ['11', '14']}; {'id': '11', 'type': 'attribute', 'children': ['12', '13']}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '13', 'type': 'identifier', 'children': [], 'value': '__normalize_name'}; {'id': '14', 'type': 'argument_list', 'children': ['15']}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'name'}; {'id': '16', 'type': 'expression_statement', 'children': ['17']}; {'id': '17', 'type': 'assignment', 'children': ['18', '19']}; {'id': '18', 'type': 'identifier', 'children': [], 'value': 'action'}; {'id': '19', 'type': 'call', 'children': ['20', '23']}; {'id': '20', 'type': 'attribute', 'children': ['21', '22']}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '22', 'type': 'identifier', 'children': [], 'value': 'get_action'}; {'id': '23', 'type': 'argument_list', 'children': ['24']}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'name'}; {'id': '25', 'type': 'if_statement', 'children': ['26', '28']}; {'id': '26', 'type': 'not_operator', 'children': ['27']}; {'id': '27', 'type': 'identifier', 'children': [], 'value': 'action'}; {'id': '28', 'type': 'block', 'children': ['29']}; {'id': '29', 'type': 'return_statement', 'children': ['30']}; {'id': '30', 'type': 'string', 'children': [], 'value': '""'}; {'id': '31', 'type': 'return_statement', 'children': ['32']}; {'id': '32', 'type': 'call', 'children': ['33', '40']}; {'id': '33', 'type': 'attribute', 'children': ['34', '39']}; {'id': '34', 'type': 'call', 'children': ['35', '38']}; {'id': '35', 'type': 'attribute', 'children': ['36', '37']}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'action'}; {'id': '37', 'type': 'identifier', 'children': [], 'value': 'shortcut'}; {'id': '38', 'type': 'argument_list', 'children': []}; {'id': '39', 'type': 'identifier', 'children': [], 'value': 'toString'}; {'id': '40', 'type': 'argument_list', 'children': []} | Returns given action shortcut.
:param name: Action to retrieve the shortcut.
:type name: unicode
:return: Action shortcut.
:rtype: unicode |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'get_pins'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'block', 'children': ['6', '10', '46', '82']}; {'id': '6', 'type': 'expression_statement', 'children': ['7']}; {'id': '7', 'type': 'assignment', 'children': ['8', '9']}; {'id': '8', 'type': 'identifier', 'children': [], 'value': 'result'}; {'id': '9', 'type': 'list', 'children': [], 'value': '[]'}; {'id': '10', 'type': 'for_statement', 'children': ['11', '12', '17']}; {'id': '11', 'type': 'identifier', 'children': [], 'value': 'a'}; {'id': '12', 'type': 'call', 'children': ['13', '14']}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'range'}; {'id': '14', 'type': 'argument_list', 'children': ['15', '16']}; {'id': '15', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '16', 'type': 'integer', 'children': [], 'value': '7'}; {'id': '17', 'type': 'block', 'children': ['18']}; {'id': '18', 'type': 'expression_statement', 'children': ['19']}; {'id': '19', 'type': 'call', 'children': ['20', '23']}; {'id': '20', 'type': 'attribute', 'children': ['21', '22']}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'result'}; {'id': '22', 'type': 'identifier', 'children': [], 'value': 'append'}; {'id': '23', 'type': 'argument_list', 'children': ['24']}; {'id': '24', 'type': 'call', 'children': ['25', '26']}; {'id': '25', 'type': 'identifier', 'children': [], 'value': 'GPIOPin'}; {'id': '26', 'type': 'argument_list', 'children': ['27', '28', '29', '38']}; {'id': '27', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '28', 'type': 'string', 'children': [], 'value': "'_action'"}; {'id': '29', 'type': 'dictionary', 'children': ['30']}; {'id': '30', 'type': 'pair', 'children': ['31', '32']}; {'id': '31', 'type': 'string', 'children': [], 'value': "'pin'"}; {'id': '32', 'type': 'call', 'children': ['33', '36']}; {'id': '33', 'type': 'attribute', 'children': ['34', '35']}; {'id': '34', 'type': 'string', 'children': [], 'value': "'A{}'"}; {'id': '35', 'type': 'identifier', 'children': [], 'value': 'format'}; {'id': '36', 'type': 'argument_list', 'children': ['37']}; {'id': '37', 'type': 'identifier', 'children': [], 'value': 'a'}; {'id': '38', 'type': 'keyword_argument', 'children': ['39', '40']}; {'id': '39', 'type': 'identifier', 'children': [], 'value': 'name'}; {'id': '40', 'type': 'call', 'children': ['41', '44']}; {'id': '41', 'type': 'attribute', 'children': ['42', '43']}; {'id': '42', 'type': 'string', 'children': [], 'value': "'A{}'"}; {'id': '43', 'type': 'identifier', 'children': [], 'value': 'format'}; {'id': '44', 'type': 'argument_list', 'children': ['45']}; {'id': '45', 'type': 'identifier', 'children': [], 'value': 'a'}; {'id': '46', 'type': 'for_statement', 'children': ['47', '48', '53']}; {'id': '47', 'type': 'identifier', 'children': [], 'value': 'b'}; {'id': '48', 'type': 'call', 'children': ['49', '50']}; {'id': '49', 'type': 'identifier', 'children': [], 'value': 'range'}; {'id': '50', 'type': 'argument_list', 'children': ['51', '52']}; {'id': '51', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '52', 'type': 'integer', 'children': [], 'value': '7'}; {'id': '53', 'type': 'block', 'children': ['54']}; {'id': '54', 'type': 'expression_statement', 'children': ['55']}; {'id': '55', 'type': 'call', 'children': ['56', '59']}; {'id': '56', 'type': 'attribute', 'children': ['57', '58']}; {'id': '57', 'type': 'identifier', 'children': [], 'value': 'result'}; {'id': '58', 'type': 'identifier', 'children': [], 'value': 'append'}; {'id': '59', 'type': 'argument_list', 'children': ['60']}; {'id': '60', 'type': 'call', 'children': ['61', '62']}; {'id': '61', 'type': 'identifier', 'children': [], 'value': 'GPIOPin'}; {'id': '62', 'type': 'argument_list', 'children': ['63', '64', '65', '74']}; {'id': '63', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '64', 'type': 'string', 'children': [], 'value': "'_action'"}; {'id': '65', 'type': 'dictionary', 'children': ['66']}; {'id': '66', 'type': 'pair', 'children': ['67', '68']}; {'id': '67', 'type': 'string', 'children': [], 'value': "'pin'"}; {'id': '68', 'type': 'call', 'children': ['69', '72']}; {'id': '69', 'type': 'attribute', 'children': ['70', '71']}; {'id': '70', 'type': 'string', 'children': [], 'value': "'B{}'"}; {'id': '71', 'type': 'identifier', 'children': [], 'value': 'format'}; {'id': '72', 'type': 'argument_list', 'children': ['73']}; {'id': '73', 'type': 'identifier', 'children': [], 'value': 'b'}; {'id': '74', 'type': 'keyword_argument', 'children': ['75', '76']}; {'id': '75', 'type': 'identifier', 'children': [], 'value': 'name'}; {'id': '76', 'type': 'call', 'children': ['77', '80']}; {'id': '77', 'type': 'attribute', 'children': ['78', '79']}; {'id': '78', 'type': 'string', 'children': [], 'value': "'B{}'"}; {'id': '79', 'type': 'identifier', 'children': [], 'value': 'format'}; {'id': '80', 'type': 'argument_list', 'children': ['81']}; {'id': '81', 'type': 'identifier', 'children': [], 'value': 'b'}; {'id': '82', 'type': 'return_statement', 'children': ['83']}; {'id': '83', 'type': 'identifier', 'children': [], 'value': 'result'} | Get a list containing references to all 16 pins of the chip.
:Example:
>>> expander = MCP23017I2C(gw)
>>> pins = expander.get_pins()
>>> pprint.pprint(pins)
[<GPIOPin A0 on MCP23017I2C>,
<GPIOPin A1 on MCP23017I2C>,
<GPIOPin A2 on MCP23017I2C>,
<GPIOPin A3 on MCP23017I2C>,
<GPIOPin A4 on MCP23017I2C>,
<GPIOPin A5 on MCP23017I2C>,
<GPIOPin A6 on MCP23017I2C>,
<GPIOPin B0 on MCP23017I2C>,
<GPIOPin B1 on MCP23017I2C>,
<GPIOPin B2 on MCP23017I2C>,
<GPIOPin B3 on MCP23017I2C>,
<GPIOPin B4 on MCP23017I2C>,
<GPIOPin B5 on MCP23017I2C>,
<GPIOPin B6 on MCP23017I2C>] |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '7']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'compose'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'f'}; {'id': '5', 'type': 'list_splat_pattern', 'children': ['6']}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'fs'}; {'id': '7', 'type': 'block', 'children': ['8', '20', '26', '60']}; {'id': '8', 'type': 'expression_statement', 'children': ['9']}; {'id': '9', 'type': 'assignment', 'children': ['10', '11']}; {'id': '10', 'type': 'identifier', 'children': [], 'value': 'rfs'}; {'id': '11', 'type': 'call', 'children': ['12', '13']}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'list'}; {'id': '13', 'type': 'argument_list', 'children': ['14']}; {'id': '14', 'type': 'call', 'children': ['15', '16']}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'chain'}; {'id': '16', 'type': 'argument_list', 'children': ['17', '19']}; {'id': '17', 'type': 'list', 'children': ['18'], 'value': '[f]'}; {'id': '18', 'type': 'identifier', 'children': [], 'value': 'f'}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'fs'}; {'id': '20', 'type': 'expression_statement', 'children': ['21']}; {'id': '21', 'type': 'call', 'children': ['22', '25']}; {'id': '22', 'type': 'attribute', 'children': ['23', '24']}; {'id': '23', 'type': 'identifier', 'children': [], 'value': 'rfs'}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'reverse'}; {'id': '25', 'type': 'argument_list', 'children': []}; {'id': '26', 'type': 'function_definition', 'children': ['27', '28', '33']}; {'id': '27', 'type': 'function_name', 'children': [], 'value': 'composed'}; {'id': '28', 'type': 'parameters', 'children': ['29', '31']}; {'id': '29', 'type': 'list_splat_pattern', 'children': ['30']}; {'id': '30', 'type': 'identifier', 'children': [], 'value': 'args'}; {'id': '31', 'type': 'dictionary_splat_pattern', 'children': ['32']}; {'id': '32', 'type': 'identifier', 'children': [], 'value': 'kwargs'}; {'id': '33', 'type': 'block', 'children': ['34']}; {'id': '34', 'type': 'return_statement', 'children': ['35']}; {'id': '35', 'type': 'call', 'children': ['36', '37']}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'reduce'}; {'id': '37', 'type': 'argument_list', 'children': ['38', '46', '51']}; {'id': '38', 'type': 'lambda', 'children': ['39', '42']}; {'id': '39', 'type': 'lambda_parameters', 'children': ['40', '41']}; {'id': '40', 'type': 'identifier', 'children': [], 'value': 'result'}; {'id': '41', 'type': 'identifier', 'children': [], 'value': 'fn'}; {'id': '42', 'type': 'call', 'children': ['43', '44']}; {'id': '43', 'type': 'identifier', 'children': [], 'value': 'fn'}; {'id': '44', 'type': 'argument_list', 'children': ['45']}; {'id': '45', 'type': 'identifier', 'children': [], 'value': 'result'}; {'id': '46', 'type': 'subscript', 'children': ['47', '48']}; {'id': '47', 'type': 'identifier', 'children': [], 'value': 'rfs'}; {'id': '48', 'type': 'slice', 'children': ['49', '50']}; {'id': '49', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '50', 'type': 'colon', 'children': []}; {'id': '51', 'type': 'call', 'children': ['52', '55']}; {'id': '52', 'type': 'subscript', 'children': ['53', '54']}; {'id': '53', 'type': 'identifier', 'children': [], 'value': 'rfs'}; {'id': '54', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '55', 'type': 'argument_list', 'children': ['56', '58']}; {'id': '56', 'type': 'list_splat', 'children': ['57']}; {'id': '57', 'type': 'identifier', 'children': [], 'value': 'args'}; {'id': '58', 'type': 'dictionary_splat', 'children': ['59']}; {'id': '59', 'type': 'identifier', 'children': [], 'value': 'kwargs'}; {'id': '60', 'type': 'return_statement', 'children': ['61']}; {'id': '61', 'type': 'identifier', 'children': [], 'value': 'composed'} | Compose functions right to left.
compose(f, g, h)(x) -> f(g(h(x)))
Args:
f, *fs: The head and rest of a sequence of callables. The
rightmost function passed can accept any arguments and
the returned function will have the same signature as
this last provided function. All preceding functions
must be unary.
Returns:
The composition of the argument functions. The returned
function will accept the same arguments as the rightmost
passed in function. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_inputcooker_store'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'char'}; {'id': '6', 'type': 'block', 'children': ['7']}; {'id': '7', 'type': 'if_statement', 'children': ['8', '11', '22']}; {'id': '8', 'type': 'attribute', 'children': ['9', '10']}; {'id': '9', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '10', 'type': 'identifier', 'children': [], 'value': 'sb'}; {'id': '11', 'type': 'block', 'children': ['12']}; {'id': '12', 'type': 'expression_statement', 'children': ['13']}; {'id': '13', 'type': 'assignment', 'children': ['14', '17']}; {'id': '14', 'type': 'attribute', 'children': ['15', '16']}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'sbdataq'}; {'id': '17', 'type': 'binary_operator', 'children': ['18', '21'], 'value': '+'}; {'id': '18', 'type': 'attribute', 'children': ['19', '20']}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'sbdataq'}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'char'}; {'id': '22', 'type': 'else_clause', 'children': ['23']}; {'id': '23', 'type': 'block', 'children': ['24']}; {'id': '24', 'type': 'expression_statement', 'children': ['25']}; {'id': '25', 'type': 'call', 'children': ['26', '29']}; {'id': '26', 'type': 'attribute', 'children': ['27', '28']}; {'id': '27', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '28', 'type': 'identifier', 'children': [], 'value': 'inputcooker_store_queue'}; {'id': '29', 'type': 'argument_list', 'children': ['30']}; {'id': '30', 'type': 'identifier', 'children': [], 'value': 'char'} | Put the cooked data in the correct queue |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '9']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_changeGroupImage'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'image_id'}; {'id': '6', 'type': 'default_parameter', 'children': ['7', '8']}; {'id': '7', 'type': 'identifier', 'children': [], 'value': 'thread_id'}; {'id': '8', 'type': 'None', 'children': []}; {'id': '9', 'type': 'block', 'children': ['10', '22', '32', '52']}; {'id': '10', 'type': 'expression_statement', 'children': ['11']}; {'id': '11', 'type': 'assignment', 'children': ['12', '15']}; {'id': '12', 'type': 'pattern_list', 'children': ['13', '14']}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'thread_id'}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'thread_type'}; {'id': '15', 'type': 'call', 'children': ['16', '19']}; {'id': '16', 'type': 'attribute', 'children': ['17', '18']}; {'id': '17', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '18', 'type': 'identifier', 'children': [], 'value': '_getThread'}; {'id': '19', 'type': 'argument_list', 'children': ['20', '21']}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'thread_id'}; {'id': '21', 'type': 'None', 'children': []}; {'id': '22', 'type': 'expression_statement', 'children': ['23']}; {'id': '23', 'type': 'assignment', 'children': ['24', '25']}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'data'}; {'id': '25', 'type': 'dictionary', 'children': ['26', '29']}; {'id': '26', 'type': 'pair', 'children': ['27', '28']}; {'id': '27', 'type': 'string', 'children': [], 'value': '"thread_image_id"'}; {'id': '28', 'type': 'identifier', 'children': [], 'value': 'image_id'}; {'id': '29', 'type': 'pair', 'children': ['30', '31']}; {'id': '30', 'type': 'string', 'children': [], 'value': '"thread_id"'}; {'id': '31', 'type': 'identifier', 'children': [], 'value': 'thread_id'}; {'id': '32', 'type': 'expression_statement', 'children': ['33']}; {'id': '33', 'type': 'assignment', 'children': ['34', '35']}; {'id': '34', 'type': 'identifier', 'children': [], 'value': 'j'}; {'id': '35', 'type': 'call', 'children': ['36', '39']}; {'id': '36', 'type': 'attribute', 'children': ['37', '38']}; {'id': '37', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '38', 'type': 'identifier', 'children': [], 'value': '_post'}; {'id': '39', 'type': 'argument_list', 'children': ['40', '45', '46', '49']}; {'id': '40', 'type': 'attribute', 'children': ['41', '44']}; {'id': '41', 'type': 'attribute', 'children': ['42', '43']}; {'id': '42', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '43', 'type': 'identifier', 'children': [], 'value': 'req_url'}; {'id': '44', 'type': 'identifier', 'children': [], 'value': 'THREAD_IMAGE'}; {'id': '45', 'type': 'identifier', 'children': [], 'value': 'data'}; {'id': '46', 'type': 'keyword_argument', 'children': ['47', '48']}; {'id': '47', 'type': 'identifier', 'children': [], 'value': 'fix_request'}; {'id': '48', 'type': 'True', 'children': []}; {'id': '49', 'type': 'keyword_argument', 'children': ['50', '51']}; {'id': '50', 'type': 'identifier', 'children': [], 'value': 'as_json'}; {'id': '51', 'type': 'True', 'children': []}; {'id': '52', 'type': 'return_statement', 'children': ['53']}; {'id': '53', 'type': 'identifier', 'children': [], 'value': 'image_id'} | Changes a thread image from an image id
:param image_id: ID of uploaded image
:param thread_id: User/Group ID to change image. See :ref:`intro_threads`
:raises: FBchatException if request failed |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '12']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_update_field'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6', '7', '8', '9']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'action'}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'field'}; {'id': '7', 'type': 'identifier', 'children': [], 'value': 'value'}; {'id': '8', 'type': 'identifier', 'children': [], 'value': 'max_tries'}; {'id': '9', 'type': 'default_parameter', 'children': ['10', '11']}; {'id': '10', 'type': 'identifier', 'children': [], 'value': 'tries'}; {'id': '11', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '12', 'type': 'block', 'children': ['13', '19', '26']}; {'id': '13', 'type': 'expression_statement', 'children': ['14']}; {'id': '14', 'type': 'call', 'children': ['15', '18']}; {'id': '15', 'type': 'attribute', 'children': ['16', '17']}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '17', 'type': 'identifier', 'children': [], 'value': 'fetch'}; {'id': '18', 'type': 'argument_list', 'children': []}; {'id': '19', 'type': 'expression_statement', 'children': ['20']}; {'id': '20', 'type': 'call', 'children': ['21', '22']}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'action'}; {'id': '22', 'type': 'argument_list', 'children': ['23', '24', '25']}; {'id': '23', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'field'}; {'id': '25', 'type': 'identifier', 'children': [], 'value': 'value'}; {'id': '26', 'type': 'try_statement', 'children': ['27', '34']}; {'id': '27', 'type': 'block', 'children': ['28']}; {'id': '28', 'type': 'expression_statement', 'children': ['29']}; {'id': '29', 'type': 'call', 'children': ['30', '33']}; {'id': '30', 'type': 'attribute', 'children': ['31', '32']}; {'id': '31', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '32', 'type': 'identifier', 'children': [], 'value': 'save'}; {'id': '33', 'type': 'argument_list', 'children': []}; {'id': '34', 'type': 'except_clause', 'children': ['35', '41']}; {'id': '35', 'type': 'as_pattern', 'children': ['36', '39']}; {'id': '36', 'type': 'attribute', 'children': ['37', '38']}; {'id': '37', 'type': 'identifier', 'children': [], 'value': 'requests'}; {'id': '38', 'type': 'identifier', 'children': [], 'value': 'HTTPError'}; {'id': '39', 'type': 'as_pattern_target', 'children': ['40']}; {'id': '40', 'type': 'identifier', 'children': [], 'value': 'ex'}; {'id': '41', 'type': 'block', 'children': ['42']}; {'id': '42', 'type': 'if_statement', 'children': ['43', '54', '70']}; {'id': '43', 'type': 'boolean_operator', 'children': ['44', '47'], 'value': 'and'}; {'id': '44', 'type': 'comparison_operator', 'children': ['45', '46'], 'value': '<'}; {'id': '45', 'type': 'identifier', 'children': [], 'value': 'tries'}; {'id': '46', 'type': 'identifier', 'children': [], 'value': 'max_tries'}; {'id': '47', 'type': 'comparison_operator', 'children': ['48', '53'], 'value': '=='}; {'id': '48', 'type': 'attribute', 'children': ['49', '52']}; {'id': '49', 'type': 'attribute', 'children': ['50', '51']}; {'id': '50', 'type': 'identifier', 'children': [], 'value': 'ex'}; {'id': '51', 'type': 'identifier', 'children': [], 'value': 'response'}; {'id': '52', 'type': 'identifier', 'children': [], 'value': 'status_code'}; {'id': '53', 'type': 'integer', 'children': [], 'value': '409'}; {'id': '54', 'type': 'block', 'children': ['55']}; {'id': '55', 'type': 'expression_statement', 'children': ['56']}; {'id': '56', 'type': 'call', 'children': ['57', '60']}; {'id': '57', 'type': 'attribute', 'children': ['58', '59']}; {'id': '58', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '59', 'type': 'identifier', 'children': [], 'value': '_update_field'}; {'id': '60', 'type': 'argument_list', 'children': ['61', '62', '63', '64', '65']}; {'id': '61', 'type': 'identifier', 'children': [], 'value': 'action'}; {'id': '62', 'type': 'identifier', 'children': [], 'value': 'field'}; {'id': '63', 'type': 'identifier', 'children': [], 'value': 'value'}; {'id': '64', 'type': 'identifier', 'children': [], 'value': 'max_tries'}; {'id': '65', 'type': 'keyword_argument', 'children': ['66', '67']}; {'id': '66', 'type': 'identifier', 'children': [], 'value': 'tries'}; {'id': '67', 'type': 'binary_operator', 'children': ['68', '69'], 'value': '+'}; {'id': '68', 'type': 'identifier', 'children': [], 'value': 'tries'}; {'id': '69', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '70', 'type': 'else_clause', 'children': ['71']}; {'id': '71', 'type': 'block', 'children': ['72']}; {'id': '72', 'type': 'raise_statement', 'children': []} | Private update_field method. Wrapped by Document.update_field.
Tracks a "tries" var to help limit recursion. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'document_quote'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'document'}; {'id': '5', 'type': 'block', 'children': ['6', '17', '25', '34']}; {'id': '6', 'type': 'expression_statement', 'children': ['7']}; {'id': '7', 'type': 'assignment', 'children': ['8', '11']}; {'id': '8', 'type': 'pattern_list', 'children': ['9', '10']}; {'id': '9', 'type': 'identifier', 'children': [], 'value': 'doc'}; {'id': '10', 'type': 'identifier', 'children': [], 'value': 'query'}; {'id': '11', 'type': 'call', 'children': ['12', '15']}; {'id': '12', 'type': 'attribute', 'children': ['13', '14']}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'urllib'}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'splitquery'}; {'id': '15', 'type': 'argument_list', 'children': ['16']}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'document'}; {'id': '17', 'type': 'expression_statement', 'children': ['18']}; {'id': '18', 'type': 'assignment', 'children': ['19', '20']}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'doc'}; {'id': '20', 'type': 'call', 'children': ['21', '22']}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'url_quote_part'}; {'id': '22', 'type': 'argument_list', 'children': ['23', '24']}; {'id': '23', 'type': 'identifier', 'children': [], 'value': 'doc'}; {'id': '24', 'type': 'string', 'children': [], 'value': "'/=,'"}; {'id': '25', 'type': 'if_statement', 'children': ['26', '27']}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'query'}; {'id': '27', 'type': 'block', 'children': ['28']}; {'id': '28', 'type': 'return_statement', 'children': ['29']}; {'id': '29', 'type': 'binary_operator', 'children': ['30', '31'], 'value': '%'}; {'id': '30', 'type': 'string', 'children': [], 'value': '"%s?%s"'}; {'id': '31', 'type': 'tuple', 'children': ['32', '33']}; {'id': '32', 'type': 'identifier', 'children': [], 'value': 'doc'}; {'id': '33', 'type': 'identifier', 'children': [], 'value': 'query'}; {'id': '34', 'type': 'return_statement', 'children': ['35']}; {'id': '35', 'type': 'identifier', 'children': [], 'value': 'doc'} | Quote given document. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '8', '10']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'is_text_extractor_available'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'typed_parameter', 'children': ['5', '6']}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'extension'}; {'id': '6', 'type': 'type', 'children': ['7']}; {'id': '7', 'type': 'identifier', 'children': [], 'value': 'str'}; {'id': '8', 'type': 'type', 'children': ['9']}; {'id': '9', 'type': 'identifier', 'children': [], 'value': 'bool'}; {'id': '10', 'type': 'block', 'children': ['11', '24', '33', '40', '46']}; {'id': '11', 'type': 'if_statement', 'children': ['12', '15']}; {'id': '12', 'type': 'comparison_operator', 'children': ['13', '14'], 'value': 'is not'}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'extension'}; {'id': '14', 'type': 'None', 'children': []}; {'id': '15', 'type': 'block', 'children': ['16']}; {'id': '16', 'type': 'expression_statement', 'children': ['17']}; {'id': '17', 'type': 'assignment', 'children': ['18', '19']}; {'id': '18', 'type': 'identifier', 'children': [], 'value': 'extension'}; {'id': '19', 'type': 'call', 'children': ['20', '23']}; {'id': '20', 'type': 'attribute', 'children': ['21', '22']}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'extension'}; {'id': '22', 'type': 'identifier', 'children': [], 'value': 'lower'}; {'id': '23', 'type': 'argument_list', 'children': []}; {'id': '24', 'type': 'expression_statement', 'children': ['25']}; {'id': '25', 'type': 'assignment', 'children': ['26', '27']}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'info'}; {'id': '27', 'type': 'call', 'children': ['28', '31']}; {'id': '28', 'type': 'attribute', 'children': ['29', '30']}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'ext_map'}; {'id': '30', 'type': 'identifier', 'children': [], 'value': 'get'}; {'id': '31', 'type': 'argument_list', 'children': ['32']}; {'id': '32', 'type': 'identifier', 'children': [], 'value': 'extension'}; {'id': '33', 'type': 'if_statement', 'children': ['34', '37']}; {'id': '34', 'type': 'comparison_operator', 'children': ['35', '36'], 'value': 'is'}; {'id': '35', 'type': 'identifier', 'children': [], 'value': 'info'}; {'id': '36', 'type': 'None', 'children': []}; {'id': '37', 'type': 'block', 'children': ['38']}; {'id': '38', 'type': 'return_statement', 'children': ['39']}; {'id': '39', 'type': 'False', 'children': []}; {'id': '40', 'type': 'expression_statement', 'children': ['41']}; {'id': '41', 'type': 'assignment', 'children': ['42', '43']}; {'id': '42', 'type': 'identifier', 'children': [], 'value': 'availability'}; {'id': '43', 'type': 'subscript', 'children': ['44', '45']}; {'id': '44', 'type': 'identifier', 'children': [], 'value': 'info'}; {'id': '45', 'type': 'identifier', 'children': [], 'value': 'AVAILABILITY'}; {'id': '46', 'type': 'if_statement', 'children': ['47', '53', '56', '66']}; {'id': '47', 'type': 'comparison_operator', 'children': ['48', '52'], 'value': '=='}; {'id': '48', 'type': 'call', 'children': ['49', '50']}; {'id': '49', 'type': 'identifier', 'children': [], 'value': 'type'}; {'id': '50', 'type': 'argument_list', 'children': ['51']}; {'id': '51', 'type': 'identifier', 'children': [], 'value': 'availability'}; {'id': '52', 'type': 'identifier', 'children': [], 'value': 'bool'}; {'id': '53', 'type': 'block', 'children': ['54']}; {'id': '54', 'type': 'return_statement', 'children': ['55']}; {'id': '55', 'type': 'identifier', 'children': [], 'value': 'availability'}; {'id': '56', 'type': 'elif_clause', 'children': ['57', '61']}; {'id': '57', 'type': 'call', 'children': ['58', '59']}; {'id': '58', 'type': 'identifier', 'children': [], 'value': 'callable'}; {'id': '59', 'type': 'argument_list', 'children': ['60']}; {'id': '60', 'type': 'identifier', 'children': [], 'value': 'availability'}; {'id': '61', 'type': 'block', 'children': ['62']}; {'id': '62', 'type': 'return_statement', 'children': ['63']}; {'id': '63', 'type': 'call', 'children': ['64', '65']}; {'id': '64', 'type': 'identifier', 'children': [], 'value': 'availability'}; {'id': '65', 'type': 'argument_list', 'children': []}; {'id': '66', 'type': 'else_clause', 'children': ['67']}; {'id': '67', 'type': 'block', 'children': ['68']}; {'id': '68', 'type': 'raise_statement', 'children': ['69']}; {'id': '69', 'type': 'call', 'children': ['70', '71']}; {'id': '70', 'type': 'identifier', 'children': [], 'value': 'ValueError'}; {'id': '71', 'type': 'argument_list', 'children': ['72']}; {'id': '72', 'type': 'call', 'children': ['73', '76']}; {'id': '73', 'type': 'attribute', 'children': ['74', '75']}; {'id': '74', 'type': 'string', 'children': [], 'value': '"Bad information object for extension: {}"'}; {'id': '75', 'type': 'identifier', 'children': [], 'value': 'format'}; {'id': '76', 'type': 'argument_list', 'children': ['77']}; {'id': '77', 'type': 'identifier', 'children': [], 'value': 'extension'} | Is a text extractor available for the specified extension? |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'set_of_vars'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'arg_plot'}; {'id': '5', 'type': 'block', 'children': ['6']}; {'id': '6', 'type': 'return_statement', 'children': ['7']}; {'id': '7', 'type': 'call', 'children': ['8', '9']}; {'id': '8', 'type': 'identifier', 'children': [], 'value': 'set'}; {'id': '9', 'type': 'generator_expression', 'children': ['10', '11', '19']}; {'id': '10', 'type': 'identifier', 'children': [], 'value': 'var'}; {'id': '11', 'type': 'for_in_clause', 'children': ['12', '13']}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'var'}; {'id': '13', 'type': 'call', 'children': ['14', '17']}; {'id': '14', 'type': 'attribute', 'children': ['15', '16']}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'arg_plot'}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'split'}; {'id': '17', 'type': 'argument_list', 'children': ['18']}; {'id': '18', 'type': 'string', 'children': [], 'value': "','"}; {'id': '19', 'type': 'if_clause', 'children': ['20']}; {'id': '20', 'type': 'comparison_operator', 'children': ['21', '22'], 'value': 'in'}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'var'}; {'id': '22', 'type': 'attribute', 'children': ['23', '24']}; {'id': '23', 'type': 'identifier', 'children': [], 'value': 'phyvars'}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'PLATES'} | Build set of needed variables.
Args:
arg_plot (str): string with variable names separated with ``,``.
Returns:
set of str: set of variables. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'match_gpus'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'available_devices'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'requirements'}; {'id': '6', 'type': 'block', 'children': ['7', '13', '30', '38', '42', '78']}; {'id': '7', 'type': 'if_statement', 'children': ['8', '10']}; {'id': '8', 'type': 'not_operator', 'children': ['9']}; {'id': '9', 'type': 'identifier', 'children': [], 'value': 'requirements'}; {'id': '10', 'type': 'block', 'children': ['11']}; {'id': '11', 'type': 'return_statement', 'children': ['12']}; {'id': '12', 'type': 'list', 'children': [], 'value': '[]'}; {'id': '13', 'type': 'if_statement', 'children': ['14', '16']}; {'id': '14', 'type': 'not_operator', 'children': ['15']}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'available_devices'}; {'id': '16', 'type': 'block', 'children': ['17']}; {'id': '17', 'type': 'raise_statement', 'children': ['18']}; {'id': '18', 'type': 'call', 'children': ['19', '20']}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'InsufficientGPUError'}; {'id': '20', 'type': 'argument_list', 'children': ['21']}; {'id': '21', 'type': 'call', 'children': ['22', '25']}; {'id': '22', 'type': 'attribute', 'children': ['23', '24']}; {'id': '23', 'type': 'string', 'children': [], 'value': '"No GPU devices available, but {} devices required."'}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'format'}; {'id': '25', 'type': 'argument_list', 'children': ['26']}; {'id': '26', 'type': 'call', 'children': ['27', '28']}; {'id': '27', 'type': 'identifier', 'children': [], 'value': 'len'}; {'id': '28', 'type': 'argument_list', 'children': ['29']}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'requirements'}; {'id': '30', 'type': 'expression_statement', 'children': ['31']}; {'id': '31', 'type': 'assignment', 'children': ['32', '33']}; {'id': '32', 'type': 'identifier', 'children': [], 'value': 'available_devices'}; {'id': '33', 'type': 'call', 'children': ['34', '37']}; {'id': '34', 'type': 'attribute', 'children': ['35', '36']}; {'id': '35', 'type': 'identifier', 'children': [], 'value': 'available_devices'}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'copy'}; {'id': '37', 'type': 'argument_list', 'children': []}; {'id': '38', 'type': 'expression_statement', 'children': ['39']}; {'id': '39', 'type': 'assignment', 'children': ['40', '41']}; {'id': '40', 'type': 'identifier', 'children': [], 'value': 'used_devices'}; {'id': '41', 'type': 'list', 'children': [], 'value': '[]'}; {'id': '42', 'type': 'for_statement', 'children': ['43', '44', '45']}; {'id': '43', 'type': 'identifier', 'children': [], 'value': 'req'}; {'id': '44', 'type': 'identifier', 'children': [], 'value': 'requirements'}; {'id': '45', 'type': 'block', 'children': ['46', '54']}; {'id': '46', 'type': 'expression_statement', 'children': ['47']}; {'id': '47', 'type': 'assignment', 'children': ['48', '49']}; {'id': '48', 'type': 'identifier', 'children': [], 'value': 'dev'}; {'id': '49', 'type': 'call', 'children': ['50', '51']}; {'id': '50', 'type': 'identifier', 'children': [], 'value': 'search_device'}; {'id': '51', 'type': 'argument_list', 'children': ['52', '53']}; {'id': '52', 'type': 'identifier', 'children': [], 'value': 'req'}; {'id': '53', 'type': 'identifier', 'children': [], 'value': 'available_devices'}; {'id': '54', 'type': 'if_statement', 'children': ['55', '56', '71']}; {'id': '55', 'type': 'identifier', 'children': [], 'value': 'dev'}; {'id': '56', 'type': 'block', 'children': ['57', '64']}; {'id': '57', 'type': 'expression_statement', 'children': ['58']}; {'id': '58', 'type': 'call', 'children': ['59', '62']}; {'id': '59', 'type': 'attribute', 'children': ['60', '61']}; {'id': '60', 'type': 'identifier', 'children': [], 'value': 'used_devices'}; {'id': '61', 'type': 'identifier', 'children': [], 'value': 'append'}; {'id': '62', 'type': 'argument_list', 'children': ['63']}; {'id': '63', 'type': 'identifier', 'children': [], 'value': 'dev'}; {'id': '64', 'type': 'expression_statement', 'children': ['65']}; {'id': '65', 'type': 'call', 'children': ['66', '69']}; {'id': '66', 'type': 'attribute', 'children': ['67', '68']}; {'id': '67', 'type': 'identifier', 'children': [], 'value': 'available_devices'}; {'id': '68', 'type': 'identifier', 'children': [], 'value': 'remove'}; {'id': '69', 'type': 'argument_list', 'children': ['70']}; {'id': '70', 'type': 'identifier', 'children': [], 'value': 'dev'}; {'id': '71', 'type': 'else_clause', 'children': ['72']}; {'id': '72', 'type': 'block', 'children': ['73']}; {'id': '73', 'type': 'raise_statement', 'children': ['74']}; {'id': '74', 'type': 'call', 'children': ['75', '76']}; {'id': '75', 'type': 'identifier', 'children': [], 'value': 'InsufficientGPUError'}; {'id': '76', 'type': 'argument_list', 'children': ['77']}; {'id': '77', 'type': 'string', 'children': [], 'value': '"Not all GPU requirements could be fulfilled."'}; {'id': '78', 'type': 'return_statement', 'children': ['79']}; {'id': '79', 'type': 'identifier', 'children': [], 'value': 'used_devices'} | Determines sufficient GPUs for the given requirements and returns a list of GPUDevices.
If there aren't sufficient GPUs a InsufficientGPUException is thrown.
:param available_devices: A list of GPUDevices
:param requirements: A list of GPURequirements
:return: A list of sufficient devices |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '12', '14']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'viewport_to_screen_space'}; {'id': '3', 'type': 'parameters', 'children': ['4', '8']}; {'id': '4', 'type': 'typed_parameter', 'children': ['5', '6']}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'framebuffer_size'}; {'id': '6', 'type': 'type', 'children': ['7']}; {'id': '7', 'type': 'identifier', 'children': [], 'value': 'vec2'}; {'id': '8', 'type': 'typed_parameter', 'children': ['9', '10']}; {'id': '9', 'type': 'identifier', 'children': [], 'value': 'point'}; {'id': '10', 'type': 'type', 'children': ['11']}; {'id': '11', 'type': 'identifier', 'children': [], 'value': 'vec4'}; {'id': '12', 'type': 'type', 'children': ['13']}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'vec2'}; {'id': '14', 'type': 'block', 'children': ['15']}; {'id': '15', 'type': 'return_statement', 'children': ['16']}; {'id': '16', 'type': 'binary_operator', 'children': ['17', '23'], 'value': '/'}; {'id': '17', 'type': '()', 'children': ['18']}; {'id': '18', 'type': 'binary_operator', 'children': ['19', '20'], 'value': '*'}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'framebuffer_size'}; {'id': '20', 'type': 'attribute', 'children': ['21', '22']}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'point'}; {'id': '22', 'type': 'identifier', 'children': [], 'value': 'xy'}; {'id': '23', 'type': 'attribute', 'children': ['24', '25']}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'point'}; {'id': '25', 'type': 'identifier', 'children': [], 'value': 'w'} | Transform point in viewport space to screen space. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'ols_covariance'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'block', 'children': ['6', '32']}; {'id': '6', 'type': 'expression_statement', 'children': ['7']}; {'id': '7', 'type': 'assignment', 'children': ['8', '9']}; {'id': '8', 'type': 'identifier', 'children': [], 'value': 'Y'}; {'id': '9', 'type': 'call', 'children': ['10', '13']}; {'id': '10', 'type': 'attribute', 'children': ['11', '12']}; {'id': '11', 'type': 'identifier', 'children': [], 'value': 'np'}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'array'}; {'id': '13', 'type': 'argument_list', 'children': ['14']}; {'id': '14', 'type': 'list_comprehension', 'children': ['15', '27']}; {'id': '15', 'type': 'subscript', 'children': ['16', '17']}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'reg'}; {'id': '17', 'type': 'slice', 'children': ['18', '21', '22']}; {'id': '18', 'type': 'attribute', 'children': ['19', '20']}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'lags'}; {'id': '21', 'type': 'colon', 'children': []}; {'id': '22', 'type': 'subscript', 'children': ['23', '26']}; {'id': '23', 'type': 'attribute', 'children': ['24', '25']}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'reg'}; {'id': '25', 'type': 'identifier', 'children': [], 'value': 'shape'}; {'id': '26', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '27', 'type': 'for_in_clause', 'children': ['28', '29']}; {'id': '28', 'type': 'identifier', 'children': [], 'value': 'reg'}; {'id': '29', 'type': 'attribute', 'children': ['30', '31']}; {'id': '30', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '31', 'type': 'identifier', 'children': [], 'value': 'data'}; {'id': '32', 'type': 'return_statement', 'children': ['33']}; {'id': '33', 'type': 'binary_operator', 'children': ['34', '45'], 'value': '*'}; {'id': '34', 'type': '()', 'children': ['35']}; {'id': '35', 'type': 'binary_operator', 'children': ['36', '37'], 'value': '/'}; {'id': '36', 'type': 'float', 'children': [], 'value': '1.0'}; {'id': '37', 'type': '()', 'children': ['38']}; {'id': '38', 'type': 'subscript', 'children': ['39', '44']}; {'id': '39', 'type': 'attribute', 'children': ['40', '43']}; {'id': '40', 'type': 'subscript', 'children': ['41', '42']}; {'id': '41', 'type': 'identifier', 'children': [], 'value': 'Y'}; {'id': '42', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '43', 'type': 'identifier', 'children': [], 'value': 'shape'}; {'id': '44', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '45', 'type': 'call', 'children': ['46', '49']}; {'id': '46', 'type': 'attribute', 'children': ['47', '48']}; {'id': '47', 'type': 'identifier', 'children': [], 'value': 'np'}; {'id': '48', 'type': 'identifier', 'children': [], 'value': 'dot'}; {'id': '49', 'type': 'argument_list', 'children': ['50', '56']}; {'id': '50', 'type': 'call', 'children': ['51', '54']}; {'id': '51', 'type': 'attribute', 'children': ['52', '53']}; {'id': '52', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '53', 'type': 'identifier', 'children': [], 'value': 'residuals'}; {'id': '54', 'type': 'argument_list', 'children': ['55']}; {'id': '55', 'type': 'identifier', 'children': [], 'value': 'Y'}; {'id': '56', 'type': 'call', 'children': ['57', '60']}; {'id': '57', 'type': 'attribute', 'children': ['58', '59']}; {'id': '58', 'type': 'identifier', 'children': [], 'value': 'np'}; {'id': '59', 'type': 'identifier', 'children': [], 'value': 'transpose'}; {'id': '60', 'type': 'argument_list', 'children': ['61']}; {'id': '61', 'type': 'call', 'children': ['62', '65']}; {'id': '62', 'type': 'attribute', 'children': ['63', '64']}; {'id': '63', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '64', 'type': 'identifier', 'children': [], 'value': 'residuals'}; {'id': '65', 'type': 'argument_list', 'children': ['66']}; {'id': '66', 'type': 'identifier', 'children': [], 'value': 'Y'} | Creates OLS estimate of the covariance matrix
Returns
----------
The OLS estimate of the covariance matrix |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '8']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'load_device'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'default_parameter', 'children': ['6', '7']}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'serial'}; {'id': '7', 'type': 'None', 'children': []}; {'id': '8', 'type': 'block', 'children': ['9', '17', '26', '79', '91', '101', '108']}; {'id': '9', 'type': 'expression_statement', 'children': ['10']}; {'id': '10', 'type': 'assignment', 'children': ['11', '12']}; {'id': '11', 'type': 'identifier', 'children': [], 'value': 'serials'}; {'id': '12', 'type': 'call', 'children': ['13', '16']}; {'id': '13', 'type': 'attribute', 'children': ['14', '15']}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'android_device'}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'list_adb_devices'}; {'id': '16', 'type': 'argument_list', 'children': []}; {'id': '17', 'type': 'if_statement', 'children': ['18', '20']}; {'id': '18', 'type': 'not_operator', 'children': ['19']}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'serials'}; {'id': '20', 'type': 'block', 'children': ['21']}; {'id': '21', 'type': 'raise_statement', 'children': ['22']}; {'id': '22', 'type': 'call', 'children': ['23', '24']}; {'id': '23', 'type': 'identifier', 'children': [], 'value': 'Error'}; {'id': '24', 'type': 'argument_list', 'children': ['25']}; {'id': '25', 'type': 'string', 'children': [], 'value': "'No adb device found!'"}; {'id': '26', 'type': 'if_statement', 'children': ['27', '29']}; {'id': '27', 'type': 'not_operator', 'children': ['28']}; {'id': '28', 'type': 'identifier', 'children': [], 'value': 'serial'}; {'id': '29', 'type': 'block', 'children': ['30', '42']}; {'id': '30', 'type': 'expression_statement', 'children': ['31']}; {'id': '31', 'type': 'assignment', 'children': ['32', '33']}; {'id': '32', 'type': 'identifier', 'children': [], 'value': 'env_serial'}; {'id': '33', 'type': 'call', 'children': ['34', '39']}; {'id': '34', 'type': 'attribute', 'children': ['35', '38']}; {'id': '35', 'type': 'attribute', 'children': ['36', '37']}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'os'}; {'id': '37', 'type': 'identifier', 'children': [], 'value': 'environ'}; {'id': '38', 'type': 'identifier', 'children': [], 'value': 'get'}; {'id': '39', 'type': 'argument_list', 'children': ['40', '41']}; {'id': '40', 'type': 'string', 'children': [], 'value': "'ANDROID_SERIAL'"}; {'id': '41', 'type': 'None', 'children': []}; {'id': '42', 'type': 'if_statement', 'children': ['43', '46', '51', '65']}; {'id': '43', 'type': 'comparison_operator', 'children': ['44', '45'], 'value': 'is not'}; {'id': '44', 'type': 'identifier', 'children': [], 'value': 'env_serial'}; {'id': '45', 'type': 'None', 'children': []}; {'id': '46', 'type': 'block', 'children': ['47']}; {'id': '47', 'type': 'expression_statement', 'children': ['48']}; {'id': '48', 'type': 'assignment', 'children': ['49', '50']}; {'id': '49', 'type': 'identifier', 'children': [], 'value': 'serial'}; {'id': '50', 'type': 'identifier', 'children': [], 'value': 'env_serial'}; {'id': '51', 'type': 'elif_clause', 'children': ['52', '58']}; {'id': '52', 'type': 'comparison_operator', 'children': ['53', '57'], 'value': '=='}; {'id': '53', 'type': 'call', 'children': ['54', '55']}; {'id': '54', 'type': 'identifier', 'children': [], 'value': 'len'}; {'id': '55', 'type': 'argument_list', 'children': ['56']}; {'id': '56', 'type': 'identifier', 'children': [], 'value': 'serials'}; {'id': '57', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '58', 'type': 'block', 'children': ['59']}; {'id': '59', 'type': 'expression_statement', 'children': ['60']}; {'id': '60', 'type': 'assignment', 'children': ['61', '62']}; {'id': '61', 'type': 'identifier', 'children': [], 'value': 'serial'}; {'id': '62', 'type': 'subscript', 'children': ['63', '64']}; {'id': '63', 'type': 'identifier', 'children': [], 'value': 'serials'}; {'id': '64', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '65', 'type': 'else_clause', 'children': ['66']}; {'id': '66', 'type': 'block', 'children': ['67']}; {'id': '67', 'type': 'raise_statement', 'children': ['68']}; {'id': '68', 'type': 'call', 'children': ['69', '70']}; {'id': '69', 'type': 'identifier', 'children': [], 'value': 'Error'}; {'id': '70', 'type': 'argument_list', 'children': ['71']}; {'id': '71', 'type': 'binary_operator', 'children': ['72', '75'], 'value': '%'}; {'id': '72', 'type': 'concatenated_string', 'children': ['73', '74']}; {'id': '73', 'type': 'string', 'children': [], 'value': "'Expected one phone, but %d found. Use the -s flag or '"}; {'id': '74', 'type': 'string', 'children': [], 'value': "'specify ANDROID_SERIAL.'"}; {'id': '75', 'type': 'call', 'children': ['76', '77']}; {'id': '76', 'type': 'identifier', 'children': [], 'value': 'len'}; {'id': '77', 'type': 'argument_list', 'children': ['78']}; {'id': '78', 'type': 'identifier', 'children': [], 'value': 'serials'}; {'id': '79', 'type': 'if_statement', 'children': ['80', '83']}; {'id': '80', 'type': 'comparison_operator', 'children': ['81', '82'], 'value': 'not in'}; {'id': '81', 'type': 'identifier', 'children': [], 'value': 'serial'}; {'id': '82', 'type': 'identifier', 'children': [], 'value': 'serials'}; {'id': '83', 'type': 'block', 'children': ['84']}; {'id': '84', 'type': 'raise_statement', 'children': ['85']}; {'id': '85', 'type': 'call', 'children': ['86', '87']}; {'id': '86', 'type': 'identifier', 'children': [], 'value': 'Error'}; {'id': '87', 'type': 'argument_list', 'children': ['88']}; {'id': '88', 'type': 'binary_operator', 'children': ['89', '90'], 'value': '%'}; {'id': '89', 'type': 'string', 'children': [], 'value': '\'Device "%s" is not found by adb.\''}; {'id': '90', 'type': 'identifier', 'children': [], 'value': 'serial'}; {'id': '91', 'type': 'expression_statement', 'children': ['92']}; {'id': '92', 'type': 'assignment', 'children': ['93', '94']}; {'id': '93', 'type': 'identifier', 'children': [], 'value': 'ads'}; {'id': '94', 'type': 'call', 'children': ['95', '98']}; {'id': '95', 'type': 'attribute', 'children': ['96', '97']}; {'id': '96', 'type': 'identifier', 'children': [], 'value': 'android_device'}; {'id': '97', 'type': 'identifier', 'children': [], 'value': 'get_instances'}; {'id': '98', 'type': 'argument_list', 'children': ['99']}; {'id': '99', 'type': 'list', 'children': ['100'], 'value': '[serial]'}; {'id': '100', 'type': 'identifier', 'children': [], 'value': 'serial'}; {'id': '101', 'type': 'assert_statement', 'children': ['102']}; {'id': '102', 'type': 'comparison_operator', 'children': ['103', '107'], 'value': '=='}; {'id': '103', 'type': 'call', 'children': ['104', '105']}; {'id': '104', 'type': 'identifier', 'children': [], 'value': 'len'}; {'id': '105', 'type': 'argument_list', 'children': ['106']}; {'id': '106', 'type': 'identifier', 'children': [], 'value': 'ads'}; {'id': '107', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '108', 'type': 'expression_statement', 'children': ['109']}; {'id': '109', 'type': 'assignment', 'children': ['110', '113']}; {'id': '110', 'type': 'attribute', 'children': ['111', '112']}; {'id': '111', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '112', 'type': 'identifier', 'children': [], 'value': '_ad'}; {'id': '113', 'type': 'subscript', 'children': ['114', '115']}; {'id': '114', 'type': 'identifier', 'children': [], 'value': 'ads'}; {'id': '115', 'type': 'integer', 'children': [], 'value': '0'} | Creates an AndroidDevice for the given serial number.
If no serial is given, it will read from the ANDROID_SERIAL
environmental variable. If the environmental variable is not set, then
it will read from 'adb devices' if there is only one. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '9']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'exists'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'obj_id'}; {'id': '6', 'type': 'default_parameter', 'children': ['7', '8']}; {'id': '7', 'type': 'identifier', 'children': [], 'value': 'obj_type'}; {'id': '8', 'type': 'None', 'children': []}; {'id': '9', 'type': 'block', 'children': ['10']}; {'id': '10', 'type': 'return_statement', 'children': ['11']}; {'id': '11', 'type': 'comparison_operator', 'children': ['12', '19'], 'value': 'in'}; {'id': '12', 'type': 'call', 'children': ['13', '16']}; {'id': '13', 'type': 'attribute', 'children': ['14', '15']}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'object_key'}; {'id': '16', 'type': 'argument_list', 'children': ['17', '18']}; {'id': '17', 'type': 'identifier', 'children': [], 'value': 'obj_id'}; {'id': '18', 'type': 'identifier', 'children': [], 'value': 'obj_type'}; {'id': '19', 'type': 'attribute', 'children': ['20', '21']}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '21', 'type': 'identifier', 'children': [], 'value': '_data'} | Return whether the given object exists in the search index.
:param obj_id: The object's unique identifier.
:param obj_type: The object's type. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'return_real_id'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'block', 'children': ['6']}; {'id': '6', 'type': 'if_statement', 'children': ['7', '12', '22']}; {'id': '7', 'type': 'comparison_operator', 'children': ['8', '11'], 'value': 'is'}; {'id': '8', 'type': 'attribute', 'children': ['9', '10']}; {'id': '9', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '10', 'type': 'identifier', 'children': [], 'value': '_prepopulated'}; {'id': '11', 'type': 'False', 'children': []}; {'id': '12', 'type': 'block', 'children': ['13']}; {'id': '13', 'type': 'raise_statement', 'children': ['14']}; {'id': '14', 'type': 'call', 'children': ['15', '18']}; {'id': '15', 'type': 'attribute', 'children': ['16', '17']}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'errors'}; {'id': '17', 'type': 'identifier', 'children': [], 'value': 'EmptyDatabase'}; {'id': '18', 'type': 'argument_list', 'children': ['19']}; {'id': '19', 'type': 'attribute', 'children': ['20', '21']}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'dbpath'}; {'id': '22', 'type': 'else_clause', 'children': ['23']}; {'id': '23', 'type': 'block', 'children': ['24']}; {'id': '24', 'type': 'return_statement', 'children': ['25']}; {'id': '25', 'type': 'call', 'children': ['26', '27']}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'return_real_id_base'}; {'id': '27', 'type': 'argument_list', 'children': ['28', '31']}; {'id': '28', 'type': 'attribute', 'children': ['29', '30']}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '30', 'type': 'identifier', 'children': [], 'value': 'dbpath'}; {'id': '31', 'type': 'attribute', 'children': ['32', '33']}; {'id': '32', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '33', 'type': 'identifier', 'children': [], 'value': '_set_object'} | Returns a list of real_id's
Parameters
----------
Returns
-------
A list of real_id values for the dataset (a real_id is the filename minus the suffix and prefix) |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '9']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'set_unobserved_before'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6', '7', '8']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'tlen'}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'qlen'}; {'id': '7', 'type': 'identifier', 'children': [], 'value': 'nt'}; {'id': '8', 'type': 'identifier', 'children': [], 'value': 'p'}; {'id': '9', 'type': 'block', 'children': ['10']}; {'id': '10', 'type': 'expression_statement', 'children': ['11']}; {'id': '11', 'type': 'call', 'children': ['12', '17']}; {'id': '12', 'type': 'attribute', 'children': ['13', '16']}; {'id': '13', 'type': 'attribute', 'children': ['14', '15']}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '15', 'type': 'identifier', 'children': [], 'value': '_unobservable'}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'set_before'}; {'id': '17', 'type': 'argument_list', 'children': ['18', '19', '20', '21']}; {'id': '18', 'type': 'identifier', 'children': [], 'value': 'tlen'}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'qlen'}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'nt'}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'p'} | Set the unobservable sequence data before this base
:param tlen: target homopolymer length
:param qlen: query homopolymer length
:param nt: nucleotide
:param p: p is the probability of attributing this base to the unobserved error
:type tlen: int
:type qlen: int
:type nt: char
:type p: float |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '9']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'model_deleted'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6', '7']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'sender'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'instance'}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'using'}; {'id': '7', 'type': 'dictionary_splat_pattern', 'children': ['8']}; {'id': '8', 'type': 'identifier', 'children': [], 'value': 'kwargs'}; {'id': '9', 'type': 'block', 'children': ['10', '17', '32']}; {'id': '10', 'type': 'expression_statement', 'children': ['11']}; {'id': '11', 'type': 'assignment', 'children': ['12', '13']}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'opts'}; {'id': '13', 'type': 'call', 'children': ['14', '15']}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'get_opts'}; {'id': '15', 'type': 'argument_list', 'children': ['16']}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'instance'}; {'id': '17', 'type': 'expression_statement', 'children': ['18']}; {'id': '18', 'type': 'assignment', 'children': ['19', '20']}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'model'}; {'id': '20', 'type': 'call', 'children': ['21', '24']}; {'id': '21', 'type': 'attribute', 'children': ['22', '23']}; {'id': '22', 'type': 'string', 'children': [], 'value': "'.'"}; {'id': '23', 'type': 'identifier', 'children': [], 'value': 'join'}; {'id': '24', 'type': 'argument_list', 'children': ['25']}; {'id': '25', 'type': 'list', 'children': ['26', '29'], 'value': '[opts.app_label, opts.object_name]'}; {'id': '26', 'type': 'attribute', 'children': ['27', '28']}; {'id': '27', 'type': 'identifier', 'children': [], 'value': 'opts'}; {'id': '28', 'type': 'identifier', 'children': [], 'value': 'app_label'}; {'id': '29', 'type': 'attribute', 'children': ['30', '31']}; {'id': '30', 'type': 'identifier', 'children': [], 'value': 'opts'}; {'id': '31', 'type': 'identifier', 'children': [], 'value': 'object_name'}; {'id': '32', 'type': 'expression_statement', 'children': ['33']}; {'id': '33', 'type': 'call', 'children': ['34', '35']}; {'id': '34', 'type': 'identifier', 'children': [], 'value': 'distill_model_event'}; {'id': '35', 'type': 'argument_list', 'children': ['36', '37', '38']}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'instance'}; {'id': '37', 'type': 'identifier', 'children': [], 'value': 'model'}; {'id': '38', 'type': 'string', 'children': [], 'value': "'deleted'"} | Automatically triggers "deleted" actions. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'Sign'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'verifiable'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'keypair'}; {'id': '6', 'type': 'block', 'children': ['7', '16', '24', '38']}; {'id': '7', 'type': 'expression_statement', 'children': ['8']}; {'id': '8', 'type': 'assignment', 'children': ['9', '10']}; {'id': '9', 'type': 'identifier', 'children': [], 'value': 'prikey'}; {'id': '10', 'type': 'call', 'children': ['11', '12']}; {'id': '11', 'type': 'identifier', 'children': [], 'value': 'bytes'}; {'id': '12', 'type': 'argument_list', 'children': ['13']}; {'id': '13', 'type': 'attribute', 'children': ['14', '15']}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'keypair'}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'PrivateKey'}; {'id': '16', 'type': 'expression_statement', 'children': ['17']}; {'id': '17', 'type': 'assignment', 'children': ['18', '19']}; {'id': '18', 'type': 'identifier', 'children': [], 'value': 'hashdata'}; {'id': '19', 'type': 'call', 'children': ['20', '23']}; {'id': '20', 'type': 'attribute', 'children': ['21', '22']}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'verifiable'}; {'id': '22', 'type': 'identifier', 'children': [], 'value': 'GetHashData'}; {'id': '23', 'type': 'argument_list', 'children': []}; {'id': '24', 'type': 'expression_statement', 'children': ['25']}; {'id': '25', 'type': 'assignment', 'children': ['26', '27']}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'res'}; {'id': '27', 'type': 'call', 'children': ['28', '35']}; {'id': '28', 'type': 'attribute', 'children': ['29', '34']}; {'id': '29', 'type': 'call', 'children': ['30', '33']}; {'id': '30', 'type': 'attribute', 'children': ['31', '32']}; {'id': '31', 'type': 'identifier', 'children': [], 'value': 'Crypto'}; {'id': '32', 'type': 'identifier', 'children': [], 'value': 'Default'}; {'id': '33', 'type': 'argument_list', 'children': []}; {'id': '34', 'type': 'identifier', 'children': [], 'value': 'Sign'}; {'id': '35', 'type': 'argument_list', 'children': ['36', '37']}; {'id': '36', 'type': 'identifier', 'children': [], 'value': 'hashdata'}; {'id': '37', 'type': 'identifier', 'children': [], 'value': 'prikey'}; {'id': '38', 'type': 'return_statement', 'children': ['39']}; {'id': '39', 'type': 'identifier', 'children': [], 'value': 'res'} | Sign the `verifiable` object with the private key from `keypair`.
Args:
verifiable:
keypair (neocore.KeyPair):
Returns:
bool: True if successfully signed. False otherwise. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'load_vint'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'buf'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'pos'}; {'id': '6', 'type': 'block', 'children': ['7', '20', '26', '67']}; {'id': '7', 'type': 'expression_statement', 'children': ['8']}; {'id': '8', 'type': 'assignment', 'children': ['9', '10']}; {'id': '9', 'type': 'identifier', 'children': [], 'value': 'limit'}; {'id': '10', 'type': 'call', 'children': ['11', '12']}; {'id': '11', 'type': 'identifier', 'children': [], 'value': 'min'}; {'id': '12', 'type': 'argument_list', 'children': ['13', '16']}; {'id': '13', 'type': 'binary_operator', 'children': ['14', '15'], 'value': '+'}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'pos'}; {'id': '15', 'type': 'integer', 'children': [], 'value': '11'}; {'id': '16', 'type': 'call', 'children': ['17', '18']}; {'id': '17', 'type': 'identifier', 'children': [], 'value': 'len'}; {'id': '18', 'type': 'argument_list', 'children': ['19']}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'buf'}; {'id': '20', 'type': 'expression_statement', 'children': ['21']}; {'id': '21', 'type': 'assignment', 'children': ['22', '23']}; {'id': '22', 'type': 'identifier', 'children': [], 'value': 'res'}; {'id': '23', 'type': 'assignment', 'children': ['24', '25']}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'ofs'}; {'id': '25', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '26', 'type': 'while_statement', 'children': ['27', '30']}; {'id': '27', 'type': 'comparison_operator', 'children': ['28', '29'], 'value': '<'}; {'id': '28', 'type': 'identifier', 'children': [], 'value': 'pos'}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'limit'}; {'id': '30', 'type': 'block', 'children': ['31', '40', '50', '54', '58']}; {'id': '31', 'type': 'expression_statement', 'children': ['32']}; {'id': '32', 'type': 'assignment', 'children': ['33', '34']}; {'id': '33', 'type': 'identifier', 'children': [], 'value': 'b'}; {'id': '34', 'type': 'call', 'children': ['35', '36']}; {'id': '35', 'type': 'identifier', 'children': [], 'value': '_byte_code'}; {'id': '36', 'type': 'argument_list', 'children': ['37']}; {'id': '37', 'type': 'subscript', 'children': ['38', '39']}; {'id': '38', 'type': 'identifier', 'children': [], 'value': 'buf'}; {'id': '39', 'type': 'identifier', 'children': [], 'value': 'pos'}; {'id': '40', 'type': 'expression_statement', 'children': ['41']}; {'id': '41', 'type': 'augmented_assignment', 'children': ['42', '43'], 'value': '+='}; {'id': '42', 'type': 'identifier', 'children': [], 'value': 'res'}; {'id': '43', 'type': '()', 'children': ['44']}; {'id': '44', 'type': 'binary_operator', 'children': ['45', '49'], 'value': '<<'}; {'id': '45', 'type': '()', 'children': ['46']}; {'id': '46', 'type': 'binary_operator', 'children': ['47', '48'], 'value': '&'}; {'id': '47', 'type': 'identifier', 'children': [], 'value': 'b'}; {'id': '48', 'type': 'integer', 'children': [], 'value': '0x7F'}; {'id': '49', 'type': 'identifier', 'children': [], 'value': 'ofs'}; {'id': '50', 'type': 'expression_statement', 'children': ['51']}; {'id': '51', 'type': 'augmented_assignment', 'children': ['52', '53'], 'value': '+='}; {'id': '52', 'type': 'identifier', 'children': [], 'value': 'pos'}; {'id': '53', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '54', 'type': 'expression_statement', 'children': ['55']}; {'id': '55', 'type': 'augmented_assignment', 'children': ['56', '57'], 'value': '+='}; {'id': '56', 'type': 'identifier', 'children': [], 'value': 'ofs'}; {'id': '57', 'type': 'integer', 'children': [], 'value': '7'}; {'id': '58', 'type': 'if_statement', 'children': ['59', '62']}; {'id': '59', 'type': 'comparison_operator', 'children': ['60', '61'], 'value': '<'}; {'id': '60', 'type': 'identifier', 'children': [], 'value': 'b'}; {'id': '61', 'type': 'integer', 'children': [], 'value': '0x80'}; {'id': '62', 'type': 'block', 'children': ['63']}; {'id': '63', 'type': 'return_statement', 'children': ['64']}; {'id': '64', 'type': 'expression_list', 'children': ['65', '66']}; {'id': '65', 'type': 'identifier', 'children': [], 'value': 'res'}; {'id': '66', 'type': 'identifier', 'children': [], 'value': 'pos'}; {'id': '67', 'type': 'raise_statement', 'children': ['68']}; {'id': '68', 'type': 'call', 'children': ['69', '70']}; {'id': '69', 'type': 'identifier', 'children': [], 'value': 'BadRarFile'}; {'id': '70', 'type': 'argument_list', 'children': ['71']}; {'id': '71', 'type': 'string', 'children': [], 'value': "'cannot load vint'"} | Load variable-size int. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '10']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'run'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6', '7', '8', '9']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'categories'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'param_file'}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'project_dir'}; {'id': '7', 'type': 'identifier', 'children': [], 'value': 'plugin'}; {'id': '8', 'type': 'identifier', 'children': [], 'value': 'target'}; {'id': '9', 'type': 'identifier', 'children': [], 'value': 'status_update_interval'}; {'id': '10', 'type': 'block', 'children': ['11']}; {'id': '11', 'type': 'return_statement', 'children': ['12']}; {'id': '12', 'type': 'call', 'children': ['13', '14']}; {'id': '13', 'type': 'identifier', 'children': [], 'value': '_run'}; {'id': '14', 'type': 'argument_list', 'children': ['15', '16', '17', '18', '19', '20']}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'categories'}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'param_file'}; {'id': '17', 'type': 'identifier', 'children': [], 'value': 'project_dir'}; {'id': '18', 'type': 'identifier', 'children': [], 'value': 'plugin'}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'target'}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'status_update_interval'} | Generate code for this project and run it |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '9']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'query'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '7']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'cls'}; {'id': '5', 'type': 'list_splat_pattern', 'children': ['6']}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'criteria'}; {'id': '7', 'type': 'dictionary_splat_pattern', 'children': ['8']}; {'id': '8', 'type': 'identifier', 'children': [], 'value': 'filters'}; {'id': '9', 'type': 'block', 'children': ['10', '30']}; {'id': '10', 'type': 'expression_statement', 'children': ['11']}; {'id': '11', 'type': 'assignment', 'children': ['12', '13']}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'query'}; {'id': '13', 'type': 'call', 'children': ['14', '27']}; {'id': '14', 'type': 'attribute', 'children': ['15', '26']}; {'id': '15', 'type': 'call', 'children': ['16', '23']}; {'id': '16', 'type': 'attribute', 'children': ['17', '22']}; {'id': '17', 'type': 'attribute', 'children': ['18', '21']}; {'id': '18', 'type': 'attribute', 'children': ['19', '20']}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'cls'}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'dbmodel'}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'query'}; {'id': '22', 'type': 'identifier', 'children': [], 'value': 'filter'}; {'id': '23', 'type': 'argument_list', 'children': ['24']}; {'id': '24', 'type': 'list_splat', 'children': ['25']}; {'id': '25', 'type': 'identifier', 'children': [], 'value': 'criteria'}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'filter_by'}; {'id': '27', 'type': 'argument_list', 'children': ['28']}; {'id': '28', 'type': 'dictionary_splat', 'children': ['29']}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'filters'}; {'id': '30', 'type': 'return_statement', 'children': ['31']}; {'id': '31', 'type': 'list_comprehension', 'children': ['32', '36']}; {'id': '32', 'type': 'call', 'children': ['33', '34']}; {'id': '33', 'type': 'identifier', 'children': [], 'value': 'cls'}; {'id': '34', 'type': 'argument_list', 'children': ['35']}; {'id': '35', 'type': 'identifier', 'children': [], 'value': 'obj'}; {'id': '36', 'type': 'for_in_clause', 'children': ['37', '38']}; {'id': '37', 'type': 'identifier', 'children': [], 'value': 'obj'}; {'id': '38', 'type': 'call', 'children': ['39', '42']}; {'id': '39', 'type': 'attribute', 'children': ['40', '41']}; {'id': '40', 'type': 'identifier', 'children': [], 'value': 'query'}; {'id': '41', 'type': 'identifier', 'children': [], 'value': 'all'}; {'id': '42', 'type': 'argument_list', 'children': []} | Wrap sqlalchemy query methods.
A wrapper for the filter and filter_by functions of sqlalchemy.
Define a dict with which columns should be filtered by which values.
.. codeblock:: python
WorkflowObject.query(id=123)
WorkflowObject.query(status=ObjectStatus.COMPLETED)
The function supports also "hybrid" arguments using WorkflowObjectModel
indirectly.
.. codeblock:: python
WorkflowObject.query(
WorkflowObject.dbmodel.status == ObjectStatus.COMPLETED,
user_id=user_id
)
See also SQLAlchemy BaseQuery's filter and filter_by documentation. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '9']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'allan_variance'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'data'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'dt'}; {'id': '6', 'type': 'default_parameter', 'children': ['7', '8']}; {'id': '7', 'type': 'identifier', 'children': [], 'value': 'tmax'}; {'id': '8', 'type': 'integer', 'children': [], 'value': '10'}; {'id': '9', 'type': 'block', 'children': ['10', '14', '36', '109']}; {'id': '10', 'type': 'expression_statement', 'children': ['11']}; {'id': '11', 'type': 'assignment', 'children': ['12', '13']}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'allanvar'}; {'id': '13', 'type': 'list', 'children': [], 'value': '[]'}; {'id': '14', 'type': 'expression_statement', 'children': ['15']}; {'id': '15', 'type': 'assignment', 'children': ['16', '17']}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'nmax'}; {'id': '17', 'type': 'conditional_expression', 'children': ['18', '22', '30'], 'value': 'if'}; {'id': '18', 'type': 'call', 'children': ['19', '20']}; {'id': '19', 'type': 'identifier', 'children': [], 'value': 'len'}; {'id': '20', 'type': 'argument_list', 'children': ['21']}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'data'}; {'id': '22', 'type': 'comparison_operator', 'children': ['23', '27'], 'value': '<'}; {'id': '23', 'type': 'call', 'children': ['24', '25']}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'len'}; {'id': '25', 'type': 'argument_list', 'children': ['26']}; {'id': '26', 'type': 'identifier', 'children': [], 'value': 'data'}; {'id': '27', 'type': 'binary_operator', 'children': ['28', '29'], 'value': '/'}; {'id': '28', 'type': 'identifier', 'children': [], 'value': 'tmax'}; {'id': '29', 'type': 'identifier', 'children': [], 'value': 'dt'}; {'id': '30', 'type': 'call', 'children': ['31', '32']}; {'id': '31', 'type': 'identifier', 'children': [], 'value': 'int'}; {'id': '32', 'type': 'argument_list', 'children': ['33']}; {'id': '33', 'type': 'binary_operator', 'children': ['34', '35'], 'value': '/'}; {'id': '34', 'type': 'identifier', 'children': [], 'value': 'tmax'}; {'id': '35', 'type': 'identifier', 'children': [], 'value': 'dt'}; {'id': '36', 'type': 'for_statement', 'children': ['37', '38', '45']}; {'id': '37', 'type': 'identifier', 'children': [], 'value': 'i'}; {'id': '38', 'type': 'call', 'children': ['39', '40']}; {'id': '39', 'type': 'identifier', 'children': [], 'value': 'range'}; {'id': '40', 'type': 'argument_list', 'children': ['41', '42']}; {'id': '41', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '42', 'type': 'binary_operator', 'children': ['43', '44'], 'value': '+'}; {'id': '43', 'type': 'identifier', 'children': [], 'value': 'nmax'}; {'id': '44', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '45', 'type': 'block', 'children': ['46', '59', '81']}; {'id': '46', 'type': 'expression_statement', 'children': ['47']}; {'id': '47', 'type': 'assignment', 'children': ['48', '49']}; {'id': '48', 'type': 'identifier', 'children': [], 'value': 'databis'}; {'id': '49', 'type': 'subscript', 'children': ['50', '51']}; {'id': '50', 'type': 'identifier', 'children': [], 'value': 'data'}; {'id': '51', 'type': 'slice', 'children': ['52', '58']}; {'id': '52', 'type': 'binary_operator', 'children': ['53', '57'], 'value': '%'}; {'id': '53', 'type': 'call', 'children': ['54', '55']}; {'id': '54', 'type': 'identifier', 'children': [], 'value': 'len'}; {'id': '55', 'type': 'argument_list', 'children': ['56']}; {'id': '56', 'type': 'identifier', 'children': [], 'value': 'data'}; {'id': '57', 'type': 'identifier', 'children': [], 'value': 'i'}; {'id': '58', 'type': 'colon', 'children': []}; {'id': '59', 'type': 'expression_statement', 'children': ['60']}; {'id': '60', 'type': 'assignment', 'children': ['61', '62']}; {'id': '61', 'type': 'identifier', 'children': [], 'value': 'y'}; {'id': '62', 'type': 'call', 'children': ['63', '77']}; {'id': '63', 'type': 'attribute', 'children': ['64', '76']}; {'id': '64', 'type': 'call', 'children': ['65', '68']}; {'id': '65', 'type': 'attribute', 'children': ['66', '67']}; {'id': '66', 'type': 'identifier', 'children': [], 'value': 'databis'}; {'id': '67', 'type': 'identifier', 'children': [], 'value': 'reshape'}; {'id': '68', 'type': 'argument_list', 'children': ['69', '75']}; {'id': '69', 'type': 'binary_operator', 'children': ['70', '74'], 'value': '//'}; {'id': '70', 'type': 'call', 'children': ['71', '72']}; {'id': '71', 'type': 'identifier', 'children': [], 'value': 'len'}; {'id': '72', 'type': 'argument_list', 'children': ['73']}; {'id': '73', 'type': 'identifier', 'children': [], 'value': 'data'}; {'id': '74', 'type': 'identifier', 'children': [], 'value': 'i'}; {'id': '75', 'type': 'identifier', 'children': [], 'value': 'i'}; {'id': '76', 'type': 'identifier', 'children': [], 'value': 'mean'}; {'id': '77', 'type': 'argument_list', 'children': ['78']}; {'id': '78', 'type': 'keyword_argument', 'children': ['79', '80']}; {'id': '79', 'type': 'identifier', 'children': [], 'value': 'axis'}; {'id': '80', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '81', 'type': 'expression_statement', 'children': ['82']}; {'id': '82', 'type': 'call', 'children': ['83', '86']}; {'id': '83', 'type': 'attribute', 'children': ['84', '85']}; {'id': '84', 'type': 'identifier', 'children': [], 'value': 'allanvar'}; {'id': '85', 'type': 'identifier', 'children': [], 'value': 'append'}; {'id': '86', 'type': 'argument_list', 'children': ['87']}; {'id': '87', 'type': 'binary_operator', 'children': ['88', '108'], 'value': '/'}; {'id': '88', 'type': 'call', 'children': ['89', '107']}; {'id': '89', 'type': 'attribute', 'children': ['90', '106']}; {'id': '90', 'type': '()', 'children': ['91']}; {'id': '91', 'type': 'binary_operator', 'children': ['92', '105'], 'value': '**'}; {'id': '92', 'type': '()', 'children': ['93']}; {'id': '93', 'type': 'binary_operator', 'children': ['94', '99'], 'value': '-'}; {'id': '94', 'type': 'subscript', 'children': ['95', '96']}; {'id': '95', 'type': 'identifier', 'children': [], 'value': 'y'}; {'id': '96', 'type': 'slice', 'children': ['97', '98']}; {'id': '97', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '98', 'type': 'colon', 'children': []}; {'id': '99', 'type': 'subscript', 'children': ['100', '101']}; {'id': '100', 'type': 'identifier', 'children': [], 'value': 'y'}; {'id': '101', 'type': 'slice', 'children': ['102', '103']}; {'id': '102', 'type': 'colon', 'children': []}; {'id': '103', 'type': 'unary_operator', 'children': ['104'], 'value': '-'}; {'id': '104', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '105', 'type': 'integer', 'children': [], 'value': '2'}; {'id': '106', 'type': 'identifier', 'children': [], 'value': 'mean'}; {'id': '107', 'type': 'argument_list', 'children': []}; {'id': '108', 'type': 'integer', 'children': [], 'value': '2'}; {'id': '109', 'type': 'return_statement', 'children': ['110']}; {'id': '110', 'type': 'expression_list', 'children': ['111', '122']}; {'id': '111', 'type': 'binary_operator', 'children': ['112', '113'], 'value': '*'}; {'id': '112', 'type': 'identifier', 'children': [], 'value': 'dt'}; {'id': '113', 'type': 'call', 'children': ['114', '117']}; {'id': '114', 'type': 'attribute', 'children': ['115', '116']}; {'id': '115', 'type': 'identifier', 'children': [], 'value': 'np'}; {'id': '116', 'type': 'identifier', 'children': [], 'value': 'arange'}; {'id': '117', 'type': 'argument_list', 'children': ['118', '119']}; {'id': '118', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '119', 'type': 'binary_operator', 'children': ['120', '121'], 'value': '+'}; {'id': '120', 'type': 'identifier', 'children': [], 'value': 'nmax'}; {'id': '121', 'type': 'integer', 'children': [], 'value': '1'}; {'id': '122', 'type': 'call', 'children': ['123', '126']}; {'id': '123', 'type': 'attribute', 'children': ['124', '125']}; {'id': '124', 'type': 'identifier', 'children': [], 'value': 'np'}; {'id': '125', 'type': 'identifier', 'children': [], 'value': 'array'}; {'id': '126', 'type': 'argument_list', 'children': ['127']}; {'id': '127', 'type': 'identifier', 'children': [], 'value': 'allanvar'} | Calculate Allan variance.
Args:
data (np.ndarray): Input data.
dt (float): Time between each data.
tmax (float): Maximum time.
Returns:
vk (np.ndarray): Frequency.
allanvar (np.ndarray): Allan variance. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '7']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'to_type_with_default'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'value_type'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'value'}; {'id': '6', 'type': 'identifier', 'children': [], 'value': 'default_value'}; {'id': '7', 'type': 'block', 'children': ['8', '18']}; {'id': '8', 'type': 'expression_statement', 'children': ['9']}; {'id': '9', 'type': 'assignment', 'children': ['10', '11']}; {'id': '10', 'type': 'identifier', 'children': [], 'value': 'result'}; {'id': '11', 'type': 'call', 'children': ['12', '15']}; {'id': '12', 'type': 'attribute', 'children': ['13', '14']}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'TypeConverter'}; {'id': '14', 'type': 'identifier', 'children': [], 'value': 'to_nullable_type'}; {'id': '15', 'type': 'argument_list', 'children': ['16', '17']}; {'id': '16', 'type': 'identifier', 'children': [], 'value': 'value_type'}; {'id': '17', 'type': 'identifier', 'children': [], 'value': 'value'}; {'id': '18', 'type': 'return_statement', 'children': ['19']}; {'id': '19', 'type': 'conditional_expression', 'children': ['20', '21', '24'], 'value': 'if'}; {'id': '20', 'type': 'identifier', 'children': [], 'value': 'result'}; {'id': '21', 'type': 'comparison_operator', 'children': ['22', '23'], 'value': '!='}; {'id': '22', 'type': 'identifier', 'children': [], 'value': 'result'}; {'id': '23', 'type': 'None', 'children': []}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'default_value'} | Converts value into an object type specified by Type Code or returns default value when conversion is not possible.
:param value_type: the TypeCode for the data type into which 'value' is to be converted.
:param value: the value to convert.
:param default_value: the default value to return if conversion is not possible (returns None).
:return: object value of type corresponding to TypeCode, or default value when conversion is not supported. |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'zSaveFile'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '5', 'type': 'identifier', 'children': [], 'value': 'fileName'}; {'id': '6', 'type': 'block', 'children': ['7', '16', '25']}; {'id': '7', 'type': 'expression_statement', 'children': ['8']}; {'id': '8', 'type': 'assignment', 'children': ['9', '10']}; {'id': '9', 'type': 'identifier', 'children': [], 'value': 'cmd'}; {'id': '10', 'type': 'call', 'children': ['11', '14']}; {'id': '11', 'type': 'attribute', 'children': ['12', '13']}; {'id': '12', 'type': 'string', 'children': [], 'value': '"SaveFile,{}"'}; {'id': '13', 'type': 'identifier', 'children': [], 'value': 'format'}; {'id': '14', 'type': 'argument_list', 'children': ['15']}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'fileName'}; {'id': '16', 'type': 'expression_statement', 'children': ['17']}; {'id': '17', 'type': 'assignment', 'children': ['18', '19']}; {'id': '18', 'type': 'identifier', 'children': [], 'value': 'reply'}; {'id': '19', 'type': 'call', 'children': ['20', '23']}; {'id': '20', 'type': 'attribute', 'children': ['21', '22']}; {'id': '21', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id': '22', 'type': 'identifier', 'children': [], 'value': '_sendDDEcommand'}; {'id': '23', 'type': 'argument_list', 'children': ['24']}; {'id': '24', 'type': 'identifier', 'children': [], 'value': 'cmd'}; {'id': '25', 'type': 'return_statement', 'children': ['26']}; {'id': '26', 'type': 'call', 'children': ['27', '28']}; {'id': '27', 'type': 'identifier', 'children': [], 'value': 'int'}; {'id': '28', 'type': 'argument_list', 'children': ['29']}; {'id': '29', 'type': 'call', 'children': ['30', '31']}; {'id': '30', 'type': 'identifier', 'children': [], 'value': 'float'}; {'id': '31', 'type': 'argument_list', 'children': ['32']}; {'id': '32', 'type': 'call', 'children': ['33', '36']}; {'id': '33', 'type': 'attribute', 'children': ['34', '35']}; {'id': '34', 'type': 'identifier', 'children': [], 'value': 'reply'}; {'id': '35', 'type': 'identifier', 'children': [], 'value': 'rstrip'}; {'id': '36', 'type': 'argument_list', 'children': []} | Saves the lens currently loaded in the server to a Zemax file |
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '9']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'expect_dimensions'}; {'id': '3', 'type': 'parameters', 'children': ['4', '7']}; {'id': '4', 'type': 'default_parameter', 'children': ['5', '6']}; {'id': '5', 'type': 'identifier', 'children': [], 'value': '__funcname'}; {'id': '6', 'type': 'identifier', 'children': [], 'value': '_qualified_name'}; {'id': '7', 'type': 'dictionary_splat_pattern', 'children': ['8']}; {'id': '8', 'type': 'identifier', 'children': [], 'value': 'dimensions'}; {'id': '9', 'type': 'block', 'children': ['10', '30', '101']}; {'id': '10', 'type': 'if_statement', 'children': ['11', '16', '24']}; {'id': '11', 'type': 'call', 'children': ['12', '13']}; {'id': '12', 'type': 'identifier', 'children': [], 'value': 'isinstance'}; {'id': '13', 'type': 'argument_list', 'children': ['14', '15']}; {'id': '14', 'type': 'identifier', 'children': [], 'value': '__funcname'}; {'id': '15', 'type': 'identifier', 'children': [], 'value': 'str'}; {'id': '16', 'type': 'block', 'children': ['17']}; {'id': '17', 'type': 'function_definition', 'children': ['18', '19', '21']}; {'id': '18', 'type': 'function_name', 'children': [], 'value': 'get_funcname'}; {'id': '19', 'type': 'parameters', 'children': ['20']}; {'id': '20', 'type': 'identifier', 'children': [], 'value': '_'}; {'id': '21', 'type': 'block', 'children': ['22']}; {'id': '22', 'type': 'return_statement', 'children': ['23']}; {'id': '23', 'type': 'identifier', 'children': [], 'value': '__funcname'}; {'id': '24', 'type': 'else_clause', 'children': ['25']}; {'id': '25', 'type': 'block', 'children': ['26']}; {'id': '26', 'type': 'expression_statement', 'children': ['27']}; {'id': '27', 'type': 'assignment', 'children': ['28', '29']}; {'id': '28', 'type': 'identifier', 'children': [], 'value': 'get_funcname'}; {'id': '29', 'type': 'identifier', 'children': [], 'value': '__funcname'}; {'id': '30', 'type': 'function_definition', 'children': ['31', '32', '34']}; {'id': '31', 'type': 'function_name', 'children': [], 'value': '_expect_dimension'}; {'id': '32', 'type': 'parameters', 'children': ['33']}; {'id': '33', 'type': 'identifier', 'children': [], 'value': 'expected_ndim'}; {'id': '34', 'type': 'block', 'children': ['35', '99']}; {'id': '35', 'type': 'function_definition', 'children': ['36', '37', '41']}; {'id': '36', 'type': 'function_name', 'children': [], 'value': '_check'}; {'id': '37', 'type': 'parameters', 'children': ['38', '39', '40']}; {'id': '38', 'type': 'identifier', 'children': [], 'value': 'func'}; {'id': '39', 'type': 'identifier', 'children': [], 'value': 'argname'}; {'id': '40', 'type': 'identifier', 'children': [], 'value': 'argvalue'}; {'id': '41', 'type': 'block', 'children': ['42', '48', '97']}; {'id': '42', 'type': 'expression_statement', 'children': ['43']}; {'id': '43', 'type': 'assignment', 'children': ['44', '45']}; {'id': '44', 'type': 'identifier', 'children': [], 'value': 'actual_ndim'}; {'id': '45', 'type': 'attribute', 'children': ['46', '47']}; {'id': '46', 'type': 'identifier', 'children': [], 'value': 'argvalue'}; {'id': '47', 'type': 'identifier', 'children': [], 'value': 'ndim'}; {'id': '48', 'type': 'if_statement', 'children': ['49', '52']}; {'id': '49', 'type': 'comparison_operator', 'children': ['50', '51'], 'value': '!='}; {'id': '50', 'type': 'identifier', 'children': [], 'value': 'actual_ndim'}; {'id': '51', 'type': 'identifier', 'children': [], 'value': 'expected_ndim'}; {'id': '52', 'type': 'block', 'children': ['53', '70']}; {'id': '53', 'type': 'if_statement', 'children': ['54', '57', '62']}; {'id': '54', 'type': 'comparison_operator', 'children': ['55', '56'], 'value': '=='}; {'id': '55', 'type': 'identifier', 'children': [], 'value': 'actual_ndim'}; {'id': '56', 'type': 'integer', 'children': [], 'value': '0'}; {'id': '57', 'type': 'block', 'children': ['58']}; {'id': '58', 'type': 'expression_statement', 'children': ['59']}; {'id': '59', 'type': 'assignment', 'children': ['60', '61']}; {'id': '60', 'type': 'identifier', 'children': [], 'value': 'actual_repr'}; {'id': '61', 'type': 'string', 'children': [], 'value': "'scalar'"}; {'id': '62', 'type': 'else_clause', 'children': ['63']}; {'id': '63', 'type': 'block', 'children': ['64']}; {'id': '64', 'type': 'expression_statement', 'children': ['65']}; {'id': '65', 'type': 'assignment', 'children': ['66', '67']}; {'id': '66', 'type': 'identifier', 'children': [], 'value': 'actual_repr'}; {'id': '67', 'type': 'binary_operator', 'children': ['68', '69'], 'value': '%'}; {'id': '68', 'type': 'string', 'children': [], 'value': '"%d-D array"'}; {'id': '69', 'type': 'identifier', 'children': [], 'value': 'actual_ndim'}; {'id': '70', 'type': 'raise_statement', 'children': ['71']}; {'id': '71', 'type': 'call', 'children': ['72', '73']}; {'id': '72', 'type': 'identifier', 'children': [], 'value': 'ValueError'}; {'id': '73', 'type': 'argument_list', 'children': ['74']}; {'id': '74', 'type': 'call', 'children': ['75', '81']}; {'id': '75', 'type': 'attribute', 'children': ['76', '80']}; {'id': '76', 'type': 'concatenated_string', 'children': ['77', '78', '79']}; {'id': '77', 'type': 'string', 'children': [], 'value': '"{func}() expected a {expected:d}-D array"'}; {'id': '78', 'type': 'string', 'children': [], 'value': '" for argument {argname!r}, but got a {actual}"'}; {'id': '79', 'type': 'string', 'children': [], 'value': '" instead."'}; {'id': '80', 'type': 'identifier', 'children': [], 'value': 'format'}; {'id': '81', 'type': 'argument_list', 'children': ['82', '88', '91', '94']}; {'id': '82', 'type': 'keyword_argument', 'children': ['83', '84']}; {'id': '83', 'type': 'identifier', 'children': [], 'value': 'func'}; {'id': '84', 'type': 'call', 'children': ['85', '86']}; {'id': '85', 'type': 'identifier', 'children': [], 'value': 'get_funcname'}; {'id': '86', 'type': 'argument_list', 'children': ['87']}; {'id': '87', 'type': 'identifier', 'children': [], 'value': 'func'}; {'id': '88', 'type': 'keyword_argument', 'children': ['89', '90']}; {'id': '89', 'type': 'identifier', 'children': [], 'value': 'expected'}; {'id': '90', 'type': 'identifier', 'children': [], 'value': 'expected_ndim'}; {'id': '91', 'type': 'keyword_argument', 'children': ['92', '93']}; {'id': '92', 'type': 'identifier', 'children': [], 'value': 'argname'}; {'id': '93', 'type': 'identifier', 'children': [], 'value': 'argname'}; {'id': '94', 'type': 'keyword_argument', 'children': ['95', '96']}; {'id': '95', 'type': 'identifier', 'children': [], 'value': 'actual'}; {'id': '96', 'type': 'identifier', 'children': [], 'value': 'actual_repr'}; {'id': '97', 'type': 'return_statement', 'children': ['98']}; {'id': '98', 'type': 'identifier', 'children': [], 'value': 'argvalue'}; {'id': '99', 'type': 'return_statement', 'children': ['100']}; {'id': '100', 'type': 'identifier', 'children': [], 'value': '_check'}; {'id': '101', 'type': 'return_statement', 'children': ['102']}; {'id': '102', 'type': 'call', 'children': ['103', '104']}; {'id': '103', 'type': 'identifier', 'children': [], 'value': 'preprocess'}; {'id': '104', 'type': 'argument_list', 'children': ['105']}; {'id': '105', 'type': 'dictionary_splat', 'children': ['106']}; {'id': '106', 'type': 'call', 'children': ['107', '108']}; {'id': '107', 'type': 'identifier', 'children': [], 'value': 'valmap'}; {'id': '108', 'type': 'argument_list', 'children': ['109', '110']}; {'id': '109', 'type': 'identifier', 'children': [], 'value': '_expect_dimension'}; {'id': '110', 'type': 'identifier', 'children': [], 'value': 'dimensions'} | Preprocessing decorator that verifies inputs are numpy arrays with a
specific dimensionality.
Examples
--------
>>> from numpy import array
>>> @expect_dimensions(x=1, y=2)
... def foo(x, y):
... return x[0] + y[0, 0]
...
>>> foo(array([1, 1]), array([[1, 1], [2, 2]]))
2
>>> foo(array([1, 1]), array([1, 1])) # doctest: +NORMALIZE_WHITESPACE
... # doctest: +ELLIPSIS
Traceback (most recent call last):
...
ValueError: ...foo() expected a 2-D array for argument 'y',
but got a 1-D array instead. |
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