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r"""returns the number of states in the given trajectories. Parameters ---------- dtraj : array_like or list of array_like Discretized trajectory or list of discretized trajectories only_used = False : boolean If False, will return max+1, where max is the largest index used. If ...
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Add an exception to trace entities. :param Exception exception: the catched exception. :param list stack: the output from python built-in `traceback.extract_stack()`. :param bool remote: If False it means it's a client error instead of a downstream service.
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Returns the number of cpus with utilization less than `thresh` percent
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Short Time Fourier Transform for complex data. Same to the default STFT strategy, but with new defaults. This is the same to: .. code-block:: python stft.base(transform=numpy.fft.fft, inverse_transform=numpy.fft.ifft) See ``stft.base`` docs for more.
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Return a filename in the share directory. @param devel_dir: directory to search when developing @ptype devel_dir: string @param filename: filename to search for @ptype filename: string @return: the found filename or None @rtype: string @raises: ValueError if not found
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Raise exception by name.
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Display the empty text
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change internal state, return action
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Calculate cumulative frequencies along a certain axis. Returns ------- new_hist: Histogram of the same type & size
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Fetch a version from the store.
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Remove all user flair on this subreddit. :returns: The json response from the server when there is flair to clear, otherwise returns None.
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Checks if this array contains a value. The check uses direct comparison between elements and the specified value. :param value: a value to be checked :return: true if this array contains the value or false otherwise.
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This is a unique identifier for the unit registry created from a FNV hash. It is needed to register a dataset's code unit system in the unit system registry.
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Prepares Gage output for GSSHA simulation Parameters: lsm_precip_data_var(list or str): String of name for precipitation variable name or list of precip variable names. See: :func:`~gsshapy.grid.GRIDtoGSSHA.lsm_precip_to_gssha_precip_gage`. lsm_precip_type(str): Type of precipitation. ...
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Returns the supported file types dialog string.
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Find the single best match above a score in a list of choices. This is a convenience method which returns the single best choice. See extract() for the full arguments list. Args: query: A string to match against choices: A list or dictionary of choices, suitable for use with ex...
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Return list of Path objects.
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Return a range of values from sorted set ``name`` between ``start`` and ``end`` sorted in ascending order. ``start`` and ``end`` can be negative, indicating the end of the range. ``desc`` a boolean indicating whether to sort the results descendingly ``withscores`` indicates to return ...
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Given a Graph element containing abstract edges compute edge segments directly connecting the source and target nodes. This operation just uses internal HoloViews operations and will be a lot slower than the pandas equivalent.
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Remove duplicates from an iterable, preserving the order. Args: seq: Iterable of various type. Returns: list: List of unique objects.
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Decorator that emits events after the function is completed. :param event: Name of the event. :type event: str :return: Callable .. note: This plainly just calls functions without passing params into the subscribed callables. This is great if you want to do som...
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Read LexStat object from cldf dataset.
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Area under the ROC curve
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Notify systemd that this process has started
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Return an IntervalTree of unconsumed ranges, of the format (start, end] with the end value not being included
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Builds an HParamInfo message from the hparam name and list of values. Args: name: string. The hparam name. values: list of google.protobuf.Value messages. The list of values for the hparam. Returns: An api_pb2.HParamInfo message.
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p expression Print the value of the expression.
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Try to find out system path with ca certificates. This path is cached and returned. If no path is found out, None is returned.
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r"""Standard 2-layer LSTM language model with tied embedding and output weights. Both embedding and hidden dimensions are 200. Parameters ---------- dataset_name : str or None, default None The dataset name on which the pre-trained model is trained. Options are 'wikitext-2'. If specifi...
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Creates a new automatically increasing key in the given directory key.
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Accessor for public keys marked as authentication keys, by identifier.
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Computes the Eigenvalues using smartpca from Eigensoft. :param in_prefix: the prefix of the input files. :param out_prefix: the prefix of the output files. :type in_prefix: str :type out_prefix: str Creates a "parameter file" used by smartpca and runs it.
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Returns a hooks.Hooks class or None if no hooks class has been set.
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Installs node module using requested package_manager.
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Dispatch to ImpalaClient.create_table. See that function's docstring for more
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Set socket timeouts for send and receive respectively
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takes a dictionary read from a yaml file and converts it to the roadmap documentation
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Takes a list of possibly structured arrays, concatenates their dtypes, and returns one big array with that dtype. Does the inverse of ``separate_struct_array``. :param list arrays: List of ``np.ndarray``s
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A function to order the phonon eigenvectors taken from phonopy
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Write some raw data to a stream using the DataPoint API This method will mutate the datapoint provided to populate it with information available from the stream as it is available (but without making any new HTTP requests). For instance, we will add in information about the stream data ...
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The callback func that will be hooked to the generic resource commands
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Convert ``x`` into a ``column``-type ``numpy.ndarray``.
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Return next name.
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Insert a rectangle into the bin. Parameters ------------- rectangle: (2,) float, size of rectangle to insert
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Convert string value to long, '' to missing
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Prints a separator to the log. This can be used to separate blocks of log messages. The separator will default its log level to the level of the last message printed unless specified with the level= kwarg. The length and type of the separator string is determined by the current style. ...
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Creates a new object path for a remote device. This method will connect to the remote device and retrieve all SDP records and then initiate the pairing. If a previously :py:meth:`create_device` was used successfully, this method will only initiate the pairing. Compared to :py:m...
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A convenience method for obtaining the headers that were sent to the S3 server. The AWS S3 API depends upon setting headers. This method is provided as a convenience for debugging issues with the S3 communications.
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Convert pixel coordinates to tile coordinates.
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Format the message and post to the appropriate slack channel. Args: message (str): Message to post to slack channel (str): Desired channel. Must start with #
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Returns all readgroup sets on the server.
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Add a new field to the Datamat with the dtype of the like_array and the shape of the like_array except for the first dimension which will be instead the field-length of this Datamat.
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Make SSH forward proxy Server class
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Method to create neighbors :param neighbors: List containing neighbors desired to be created on database :return: None
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Unescape HTML strings, and convert & etc.
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Compute sample weight given an array of sample classes. The weights are assigned on a per-class basis and the per-class weights are inversely proportional to their frequency. Parameters ---------- y: NumPy array, 1D dtype=int sample classes, values must be 0 or posit...
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Return ucnstring as Unicode.
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Create and start the WebSocket server.
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Returns the existing event sources. :rtype: ~collections.Iterable[str]
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Processes this fields `src` from `ctx.src`.
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Implements synchronous periodic checks
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Called in trunk plugin's AFTER_INIT
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Generates loaders in the specified order. Arguments can be `.Locality` instances, producing the loader(s) available for that locality, `str` instances (used as file path templates) or `callable`s. These can be mixed: .. code-block:: python # define a load order using predefined user-local loc...
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A class method for quickly creating DFT tasks with optional cosmo parameter . Args: mol: Input molecule xc: Exchange correlation to use. \\*\\*kwargs: Any of the other kwargs supported by NwTask. Note the theory is always "dft" for a dft task.
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Retrieve events for the specified search jobs.
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Set connection arguments for remote or local connection.
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Append new nodes after last child node.
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Look for NAPTR RRs for the specified number in the specified domains. e.g. lookup('16505551212', ['e164.dnspython.org.', 'e164.arpa.'])
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Match ``package`` with the requirement. :param package: Package to test with the requirement. :type package: package expression string or :class:`Package` :returns: ``True`` if ``package`` satisfies the requirement. :rtype: bool
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Return the ``model`` object with the passed ``object_id``. If ``object_id`` is None, then return the object whose ``slug_field`` equals the passed ``slug``. If ``slug`` and ``slug_field`` are not passed, then raise Http404 exception.
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Return a dict mapping resources of the given bare `peer_jid` to the presence state last received for that resource. Unavailable presence states are not included. If the bare JID is in a error state (i.e. an error presence stanza has been received), the returned mapping is empty.
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returns None if cache cannot be loaded
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Takes input of community assignments. Returns reindexed community assignment by using smallest numbers possible. Parameters ---------- communityID : array-like list or array of integers. Output from community detection algorithems. Returns ------- new_communityID : array clea...
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Clear all data before `timestamp` for a given key. Note that the timestamp is rounded down to the nearest block boundary
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Query and format a citations page from Zenodo entries Parameters ---------- zid : `int`, `str` the Zenodo ID of the target record url : `str`, optional the base URL of the Zenodo host, defaults to ``https://zenodo.org`` hist : `int`, optional the maximum number of hits to ...
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Decorator to prevent commands from being used when not attached.
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print all elements of a counter in descending order
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Build an instance of CertificateInstance :param dict payload: Payload response from the API :returns: twilio.rest.preview.deployed_devices.fleet.certificate.CertificateInstance :rtype: twilio.rest.preview.deployed_devices.fleet.certificate.CertificateInstance
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Execute a salt-ssh call synchronously. .. versionadded:: 2015.5.0 WARNING: Eauth is **NOT** respected .. code-block:: python client.cmd_sync({ 'tgt': 'silver', 'fun': 'test.ping', 'arg': (), 'tgt_type'='glob', ...
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Returns a function that attaches an image to page if it exists Currenlty assumes that images have already been imported and info has been stored in record_keeper
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Chech an object is single or pair or neither. Of course,, all pairs are single, so what the function is really detecting is whether an object is only single or at the same time a pair. Args: obj (object): Literally anything. Returns: str: 'Single', or 'Pair', or 'Neither'
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Returns the version of the specified binary tool. If replaces_scope and replaces_name are defined, then the caller must pass in a context, otherwise no context should be passed. # TODO: Once we're migrated, get rid of the context arg. :API: public
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All servers matching one tag set. A tag set is a dict. A server matches if its tags are a superset: A server tagged {'a': '1', 'b': '2'} matches the tag set {'a': '1'}. The empty tag set {} matches any server.
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Load the profiles into the dropdown list. :param overwrite: If we overwrite existing profiles from the plugin. :type overwrite: bool
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Show the details from EC2 regarding cloudwatch detailed monitoring.
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Returns `True` if we can get output of the command in the `settings.wait_command` time. Command will be killed if it wasn't finished in the time. :type popen: Popen :rtype: bool
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Return device width, height, rotation
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Build row objects that are serializable using Athena for sending to the client. @param items: an iterable of objects compatible with my columns' C{extractValue} methods. @return: a list of dictionaries, where each dictionary has a string key for each column name in my list of c...
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Given a list of tokens from the grammar, return a list of commands.
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Generate default symetric grp constraints.
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Run development server
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Highlighted the lines specified in the `hl_lines` option by post-processing the token stream coming from `_format_lines`.
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Remove discontinuities in angle channels so that they don't cause artifacts in algorithms that rely on the smoothness of the functions.
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Finalize structural variants, adding effects and splitting if needed.
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Container blacklist.
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Replace the uuid's with names. Parameters ---------- resp : ??? ??? Returns ------- ??? ???
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A function that returns a markup.py page object with the required html header.
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A fingerprint for each vertex The result is invariant under permutation of the vertex indexes. Vertices that are symmetrically equivalent will get the same fingerprint, e.g. the hydrogens in methane would get the same fingerprint.
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The first item in that sequence If there aren't any, raise a ValueError with that message
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Static method for listing suites from both local source and cloud. Uses PrettyTable to generate the table. :param suitedir: Local directory for suites. :param cloud: cloud module :return: PrettyTable object or None if no test cases were found