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(module (function_definition (function_name_get_items) function_name_get_items (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_collection) identifier_collection (call (identifier_JSONClientValidated) identifier_JSONClientValidated (argument_list (string_'assessment') string_'assessment' (keyword_argument (identifier_collection) identifier_collection (string_'Item') string_'Item' )keyword_argument (keyword_argument (identifier_runtime) identifier_runtime (attribute (identifier_self) identifier_self (identifier__runtime) identifier__runtime )attribute )keyword_argument )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_result) identifier_result (call (attribute (call (attribute (identifier_collection) identifier_collection (identifier_find) identifier_find )attribute (argument_list (call (attribute (identifier_self) identifier_self (identifier__view_filter) identifier__view_filter )attribute (argument_list )argument_list )call )argument_list )call (identifier_sort) identifier_sort )attribute (argument_list (string_'_id') string_'_id' (identifier_DESCENDING) identifier_DESCENDING )argument_list )call )assignment )expression_statement (return_statement (call (attribute (identifier_objects) identifier_objects (identifier_ItemList) identifier_ItemList )attribute (argument_list (identifier_result) identifier_result (keyword_argument (identifier_runtime) identifier_runtime (attribute (identifier_self) identifier_self (identifier__runtime) identifier__runtime )attribute )keyword_argument (keyword_argument (identifier_proxy) identifier_proxy (attribute (identifier_self) identifier_self (identifier__proxy) identifier__proxy )attribute )keyword_argument )argument_list )call )return_statement )block )function_definition )module
Gets all ``Items``. In plenary mode, the returned list contains all known items or an error results. Otherwise, the returned list may contain only those items that are accessible through this session. return: (osid.assessment.ItemList) - a list of ``Items`` raise: OperationFailed - unable to complete request raise: PermissionDenied - authorization failure occurred *compliance: mandatory -- This method must be implemented.*
(module (function_definition (function_name_extract_bs) function_name_extract_bs (parameters (identifier_self) identifier_self (identifier_cutoff) identifier_cutoff (identifier_ligcentroid) identifier_ligcentroid (identifier_resis) identifier_resis )parameters (block (return_statement (list_comprehension (call (attribute (identifier_obres) identifier_obres (identifier_GetIdx) identifier_GetIdx )attribute (argument_list )argument_list )call (for_in_clause (identifier_obres) identifier_obres (identifier_resis) identifier_resis )for_in_clause (if_clause (call (attribute (identifier_self) identifier_self (identifier_res_belongs_to_bs) identifier_res_belongs_to_bs )attribute (argument_list (identifier_obres) identifier_obres (identifier_cutoff) identifier_cutoff (identifier_ligcentroid) identifier_ligcentroid )argument_list )call )if_clause )list_comprehension )return_statement )block )function_definition )module
Return list of ids from residues belonging to the binding site
(module (function_definition (function_name_configuration) function_name_configuration (parameters (identifier_ctx) identifier_ctx )parameters (block (expression_statement (assignment (identifier_t) identifier_t (list (list (string_"Key") string_"Key" (string_"Value") string_"Value" )list )list )assignment )expression_statement (for_statement (identifier_key) identifier_key (attribute (attribute (identifier_ctx) identifier_ctx (identifier_bitshares) identifier_bitshares )attribute (identifier_config) identifier_config )attribute (block (expression_statement (call (attribute (identifier_t) identifier_t (identifier_append) identifier_append )attribute (argument_list (list (identifier_key) identifier_key (subscript (attribute (attribute (identifier_ctx) identifier_ctx (identifier_bitshares) identifier_bitshares )attribute (identifier_config) identifier_config )attribute (identifier_key) identifier_key )subscript )list )argument_list )call )expression_statement )block )for_statement (expression_statement (call (identifier_print_table) identifier_print_table (argument_list (identifier_t) identifier_t )argument_list )call )expression_statement )block )function_definition )module
Show configuration variables
(module (function_definition (function_name_local_docker) function_name_local_docker (parameters (typed_parameter (identifier_context) identifier_context (type (identifier_Context) identifier_Context )type )typed_parameter )parameters (block (expression_statement (assignment (identifier_output) identifier_output (call (attribute (identifier_io) identifier_io (identifier_StringIO) identifier_StringIO )attribute (argument_list )argument_list )call )assignment )expression_statement (with_statement (with_clause (with_item (call (attribute (identifier_contextlib) identifier_contextlib (identifier_redirect_stdout) identifier_redirect_stdout )attribute (argument_list (identifier_output) identifier_output )argument_list )call )with_item )with_clause (block (expression_statement (call (attribute (identifier_context) identifier_context (identifier_shell) identifier_shell )attribute (argument_list (string_'docker-machine') string_'docker-machine' (string_'ip') string_'ip' (string_'default') string_'default' )argument_list )call )expression_statement )block )with_statement (expression_statement (assignment (identifier_host_machine_ip) identifier_host_machine_ip (boolean_operator (call (attribute (call (attribute (identifier_output) identifier_output (identifier_getvalue) identifier_getvalue )attribute (argument_list )argument_list )call (identifier_strip) identifier_strip )attribute (argument_list )argument_list )call (call (attribute (identifier_socket) identifier_socket (identifier_gethostbyname) identifier_gethostbyname )attribute (argument_list (call (attribute (identifier_socket) identifier_socket (identifier_gethostname) identifier_gethostname )attribute (argument_list )argument_list )call )argument_list )call )boolean_operator )assignment )expression_statement (expression_statement (assignment (identifier_args) identifier_args (tuple )tuple )assignment )expression_statement (if_statement (comparison_operator (attribute (identifier_context) identifier_context (identifier_verbosity) identifier_verbosity )attribute (integer_1) integer_1 )comparison_operator (block (expression_statement (augmented_assignment (identifier_args) identifier_args (tuple (string_'--verbose') string_'--verbose' )tuple )augmented_assignment )expression_statement )block )if_statement (expression_statement (augmented_assignment (identifier_args) identifier_args (tuple (string_'up') string_'up' (string_'--build') string_'--build' (string_'--remove-orphans') string_'--remove-orphans' )tuple )augmented_assignment )expression_statement (if_statement (not_operator (attribute (identifier_context) identifier_context (identifier_use_colour) identifier_use_colour )attribute )not_operator (block (expression_statement (augmented_assignment (identifier_args) identifier_args (tuple (string_'--no-color') string_'--no-color' )tuple )augmented_assignment )expression_statement )block )if_statement (expression_statement (call (attribute (identifier_context) identifier_context (identifier_shell) identifier_shell )attribute (argument_list (string_'docker-compose') string_'docker-compose' (list_splat (identifier_args) identifier_args )list_splat (keyword_argument (identifier_environment) identifier_environment (dictionary (pair (string_'HOST_MACHINE_IP') string_'HOST_MACHINE_IP' (identifier_host_machine_ip) identifier_host_machine_ip )pair )dictionary )keyword_argument )argument_list )call )expression_statement )block )function_definition )module
Runs the app in a docker container; for local development only! Once performed, `docker-compose up` can be used directly
(module (function_definition (function_name_parse) function_name_parse (parameters (identifier_self) identifier_self (list_splat_pattern (identifier_args) identifier_args )list_splat_pattern )parameters (block (if_statement (call (identifier_isinstance) identifier_isinstance (argument_list (attribute (identifier_self) identifier_self (identifier_dictionary) identifier_dictionary )attribute (identifier_dict) identifier_dict )argument_list )call (block (return_statement (attribute (identifier_self) identifier_self (identifier_dictionary) identifier_dictionary )attribute )return_statement )block )if_statement (raise_statement (call (attribute (identifier_self) identifier_self (identifier_subparserException) identifier_subparserException )attribute (argument_list (binary_operator (string_"Argument passed to Dictionary SubParser is not a dict: %s") string_"Argument passed to Dictionary SubParser is not a dict: %s" (call (identifier_type) identifier_type (argument_list (attribute (identifier_self) identifier_self (identifier_dictionary) identifier_dictionary )attribute )argument_list )call )binary_operator )argument_list )call )raise_statement )block )function_definition )module
Return our initialized dictionary arguments.
(module (function_definition (function_name_InputAA) function_name_InputAA (parameters (identifier_seq_length) identifier_seq_length (default_parameter (identifier_name) identifier_name (None) None )default_parameter (dictionary_splat_pattern (identifier_kwargs) identifier_kwargs )dictionary_splat_pattern )parameters (block (return_statement (call (identifier_Input) identifier_Input (argument_list (tuple (identifier_seq_length) identifier_seq_length (call (identifier_len) identifier_len (argument_list (identifier_AMINO_ACIDS) identifier_AMINO_ACIDS )argument_list )call )tuple (keyword_argument (identifier_name) identifier_name (identifier_name) identifier_name )keyword_argument (dictionary_splat (identifier_kwargs) identifier_kwargs )dictionary_splat )argument_list )call )return_statement )block )function_definition )module
Input placeholder for array returned by `encodeAA` Wrapper for: `keras.layers.Input((seq_length, 22), name=name, **kwargs)`
(module (function_definition (function_name__reduction_output_shape) function_name__reduction_output_shape (parameters (identifier_x) identifier_x (identifier_output_shape) identifier_output_shape (identifier_reduced_dim) identifier_reduced_dim )parameters (block (if_statement (comparison_operator (identifier_output_shape) identifier_output_shape (None) None )comparison_operator (block (if_statement (comparison_operator (identifier_reduced_dim) identifier_reduced_dim (None) None )comparison_operator (block (return_statement (call (identifier_Shape) identifier_Shape (argument_list (list )list )argument_list )call )return_statement )block (else_clause (block (if_statement (comparison_operator (identifier_reduced_dim) identifier_reduced_dim (attribute (attribute (identifier_x) identifier_x (identifier_shape) identifier_shape )attribute (identifier_dims) identifier_dims )attribute )comparison_operator (block (raise_statement (call (identifier_ValueError) identifier_ValueError (argument_list (binary_operator (string_"reduced_dim=%s not in x.shape.dims=%s") string_"reduced_dim=%s not in x.shape.dims=%s" (tuple (identifier_reduced_dim) identifier_reduced_dim (attribute (identifier_x) identifier_x (identifier_shape) identifier_shape )attribute )tuple )binary_operator )argument_list )call )raise_statement )block )if_statement (return_statement (binary_operator (attribute (identifier_x) identifier_x (identifier_shape) identifier_shape )attribute (identifier_reduced_dim) identifier_reduced_dim )binary_operator )return_statement )block )else_clause )if_statement )block )if_statement (if_statement (comparison_operator (identifier_reduced_dim) identifier_reduced_dim (None) None )comparison_operator (block (if_statement (comparison_operator (list (identifier_reduced_dim) identifier_reduced_dim )list (list_comprehension (identifier_d) identifier_d (for_in_clause (identifier_d) identifier_d (attribute (attribute (identifier_x) identifier_x (identifier_shape) identifier_shape )attribute (identifier_dims) identifier_dims )attribute )for_in_clause (if_clause (comparison_operator (identifier_d) identifier_d (attribute (identifier_output_shape) identifier_output_shape (identifier_dims) identifier_dims )attribute )comparison_operator )if_clause )list_comprehension )comparison_operator (block (raise_statement (call (identifier_ValueError) identifier_ValueError (argument_list (binary_operator (concatenated_string (string_"reduced_dim contradicts output_shape:") string_"reduced_dim contradicts output_shape:" (string_"x=%s output_shape=%s reduced_dim=%s") string_"x=%s output_shape=%s reduced_dim=%s" )concatenated_string (tuple (identifier_x) identifier_x (identifier_output_shape) identifier_output_shape (identifier_reduced_dim) identifier_reduced_dim )tuple )binary_operator )argument_list )call )raise_statement )block )if_statement )block )if_statement (return_statement (identifier_output_shape) identifier_output_shape )return_statement )block )function_definition )module
Helper function to reduce_sum, etc.
(module (function_definition (function_name_set_global_defaults) function_name_set_global_defaults (parameters (dictionary_splat_pattern (identifier_kwargs) identifier_kwargs )dictionary_splat_pattern )parameters (block (expression_statement (assignment (identifier_valid_options) identifier_valid_options (list (string_'active') string_'active' (string_'selected') string_'selected' (string_'disabled') string_'disabled' (string_'on') string_'on' (string_'off') string_'off' (string_'on_active') string_'on_active' (string_'on_selected') string_'on_selected' (string_'on_disabled') string_'on_disabled' (string_'off_active') string_'off_active' (string_'off_selected') string_'off_selected' (string_'off_disabled') string_'off_disabled' (string_'color') string_'color' (string_'color_on') string_'color_on' (string_'color_off') string_'color_off' (string_'color_active') string_'color_active' (string_'color_selected') string_'color_selected' (string_'color_disabled') string_'color_disabled' (string_'color_on_selected') string_'color_on_selected' (string_'color_on_active') string_'color_on_active' (string_'color_on_disabled') string_'color_on_disabled' (string_'color_off_selected') string_'color_off_selected' (string_'color_off_active') string_'color_off_active' (string_'color_off_disabled') string_'color_off_disabled' (string_'animation') string_'animation' (string_'offset') string_'offset' (string_'scale_factor') string_'scale_factor' )list )assignment )expression_statement (for_statement (identifier_kw) identifier_kw (identifier_kwargs) identifier_kwargs (block (if_statement (comparison_operator (identifier_kw) identifier_kw (identifier_valid_options) identifier_valid_options )comparison_operator (block (expression_statement (assignment (subscript (identifier__default_options) identifier__default_options (identifier_kw) identifier_kw )subscript (subscript (identifier_kwargs) identifier_kwargs (identifier_kw) identifier_kw )subscript )assignment )expression_statement )block (else_clause (block (expression_statement (assignment (identifier_error) identifier_error (call (attribute (string_"Invalid option '{0}'") string_"Invalid option '{0}'" (identifier_format) identifier_format )attribute (argument_list (identifier_kw) identifier_kw )argument_list )call )assignment )expression_statement (raise_statement (call (identifier_KeyError) identifier_KeyError (argument_list (identifier_error) identifier_error )argument_list )call )raise_statement )block )else_clause )if_statement )block )for_statement )block )function_definition )module
Set global defaults for the options passed to the icon painter.
(module (function_definition (function_name__iterate_rules) function_name__iterate_rules (parameters (identifier_rules) identifier_rules (identifier_topology) identifier_topology (identifier_max_iter) identifier_max_iter )parameters (block (expression_statement (assignment (identifier_atoms) identifier_atoms (call (identifier_list) identifier_list (argument_list (call (attribute (identifier_topology) identifier_topology (identifier_atoms) identifier_atoms )attribute (argument_list )argument_list )call )argument_list )call )assignment )expression_statement (for_statement (identifier__) identifier__ (call (identifier_range) identifier_range (argument_list (identifier_max_iter) identifier_max_iter )argument_list )call (block (expression_statement (augmented_assignment (identifier_max_iter) identifier_max_iter (integer_1) integer_1 )augmented_assignment )expression_statement (expression_statement (assignment (identifier_found_something) identifier_found_something (False) False )assignment )expression_statement (for_statement (identifier_rule) identifier_rule (call (attribute (identifier_rules) identifier_rules (identifier_values) identifier_values )attribute (argument_list )argument_list )call (block (for_statement (identifier_match_index) identifier_match_index (call (attribute (identifier_rule) identifier_rule (identifier_find_matches) identifier_find_matches )attribute (argument_list (identifier_topology) identifier_topology )argument_list )call (block (expression_statement (assignment (identifier_atom) identifier_atom (subscript (identifier_atoms) identifier_atoms (identifier_match_index) identifier_match_index )subscript )assignment )expression_statement (if_statement (comparison_operator (attribute (identifier_rule) identifier_rule (identifier_name) identifier_name )attribute (attribute (identifier_atom) identifier_atom (identifier_whitelist) identifier_whitelist )attribute )comparison_operator (block (expression_statement (call (attribute (attribute (identifier_atom) identifier_atom (identifier_whitelist) identifier_whitelist )attribute (identifier_add) identifier_add )attribute (argument_list (attribute (identifier_rule) identifier_rule (identifier_name) identifier_name )attribute )argument_list )call )expression_statement (expression_statement (augmented_assignment (attribute (identifier_atom) identifier_atom (identifier_blacklist) identifier_blacklist )attribute (attribute (identifier_rule) identifier_rule (identifier_overrides) identifier_overrides )attribute )augmented_assignment )expression_statement (expression_statement (assignment (identifier_found_something) identifier_found_something (True) True )assignment )expression_statement )block )if_statement )block )for_statement )block )for_statement (if_statement (not_operator (identifier_found_something) identifier_found_something )not_operator (block (break_statement )break_statement )block )if_statement )block (else_clause (block (expression_statement (call (identifier_warn) identifier_warn (argument_list (string_"Reached maximum iterations. Something probably went wrong.") string_"Reached maximum iterations. Something probably went wrong." )argument_list )call )expression_statement )block )else_clause )for_statement )block )function_definition )module
Iteratively run all the rules until the white- and backlists converge. Parameters ---------- rules : dict A dictionary mapping rule names (typically atomtype names) to SMARTSGraphs that evaluate those rules. topology : simtk.openmm.app.Topology The topology that we are trying to atomtype. max_iter : int The maximum number of iterations.
(module (function_definition (function_name_coerce) function_name_coerce (parameters (identifier_self) identifier_self (identifier_value) identifier_value )parameters (block (if_statement (not_operator (call (attribute (identifier_self) identifier_self (identifier_is_valid) identifier_is_valid )attribute (argument_list (identifier_value) identifier_value )argument_list )call )not_operator (block (raise_statement (call (attribute (identifier_ex) identifier_ex (identifier_SerializeException) identifier_SerializeException )attribute (argument_list (call (attribute (concatenated_string (string_'{} is not a valid value for ') string_'{} is not a valid value for ' (string_'type {}') string_'type {}' )concatenated_string (identifier_format) identifier_format )attribute (argument_list (identifier_value) identifier_value (attribute (attribute (identifier_self) identifier_self (identifier___class__) identifier___class__ )attribute (identifier___name__) identifier___name__ )attribute )argument_list )call )argument_list )call )raise_statement )block )if_statement (return_statement (identifier_value) identifier_value )return_statement )block )function_definition )module
Subclasses should override this method for type coercion. Default version will simply return the argument. If the argument is not valid, a SerializeException is raised. For primitives like booleans, ints, floats, and strings, use this default version to avoid unintended type conversions.
(module (function_definition (function_name_upload_from_stream_with_id) function_name_upload_from_stream_with_id (parameters (identifier_self) identifier_self (identifier_file_id) identifier_file_id (identifier_filename) identifier_filename (identifier_source) identifier_source (default_parameter (identifier_chunk_size_bytes) identifier_chunk_size_bytes (None) None )default_parameter (default_parameter (identifier_metadata) identifier_metadata (None) None )default_parameter )parameters (block (with_statement (with_clause (with_item (as_pattern (call (attribute (identifier_self) identifier_self (identifier_open_upload_stream_with_id) identifier_open_upload_stream_with_id )attribute (argument_list (identifier_file_id) identifier_file_id (identifier_filename) identifier_filename (identifier_chunk_size_bytes) identifier_chunk_size_bytes (identifier_metadata) identifier_metadata )argument_list )call (as_pattern_target (identifier_gin) identifier_gin )as_pattern_target )as_pattern )with_item )with_clause (block (expression_statement (call (attribute (identifier_gin) identifier_gin (identifier_write) identifier_write )attribute (argument_list (identifier_source) identifier_source )argument_list )call )expression_statement )block )with_statement )block )function_definition )module
Uploads a user file to a GridFS bucket with a custom file id. Reads the contents of the user file from `source` and uploads it to the file `filename`. Source can be a string or file-like object. For example:: my_db = MongoClient().test fs = GridFSBucket(my_db) file_id = fs.upload_from_stream( ObjectId(), "test_file", "data I want to store!", chunk_size_bytes=4, metadata={"contentType": "text/plain"}) Raises :exc:`~gridfs.errors.NoFile` if no such version of that file exists. Raises :exc:`~ValueError` if `filename` is not a string. :Parameters: - `file_id`: The id to use for this file. The id must not have already been used for another file. - `filename`: The name of the file to upload. - `source`: The source stream of the content to be uploaded. Must be a file-like object that implements :meth:`read` or a string. - `chunk_size_bytes` (options): The number of bytes per chunk of this file. Defaults to the chunk_size_bytes of :class:`GridFSBucket`. - `metadata` (optional): User data for the 'metadata' field of the files collection document. If not provided the metadata field will be omitted from the files collection document.
(module (function_definition (function_name_start_parallel) function_name_start_parallel (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_num_processes) identifier_num_processes )attribute (call (identifier_get_num_processes) identifier_get_num_processes (argument_list )argument_list )call )assignment )expression_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_task_queue) identifier_task_queue )attribute (call (attribute (identifier_multiprocessing) identifier_multiprocessing (identifier_Queue) identifier_Queue )attribute (argument_list (keyword_argument (identifier_maxsize) identifier_maxsize (identifier_Q_MAX_SIZE) identifier_Q_MAX_SIZE )keyword_argument )argument_list )call )assignment )expression_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_result_queue) identifier_result_queue )attribute (call (attribute (identifier_multiprocessing) identifier_multiprocessing (identifier_Queue) identifier_Queue )attribute (argument_list )argument_list )call )assignment )expression_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_log_queue) identifier_log_queue )attribute (call (attribute (identifier_multiprocessing) identifier_multiprocessing (identifier_Queue) identifier_Queue )attribute (argument_list )argument_list )call )assignment )expression_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_complete) identifier_complete )attribute (call (attribute (identifier_multiprocessing) identifier_multiprocessing (identifier_Event) identifier_Event )attribute (argument_list )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_args) identifier_args (binary_operator (tuple (attribute (identifier_self) identifier_self (identifier_compute) identifier_compute )attribute (attribute (identifier_self) identifier_self (identifier_task_queue) identifier_task_queue )attribute (attribute (identifier_self) identifier_self (identifier_result_queue) identifier_result_queue )attribute (attribute (identifier_self) identifier_self (identifier_log_queue) identifier_log_queue )attribute (attribute (identifier_self) identifier_self (identifier_complete) identifier_complete )attribute )tuple (attribute (identifier_self) identifier_self (identifier_context) identifier_context )attribute )binary_operator )assignment )expression_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_processes) identifier_processes )attribute (list_comprehension (call (attribute (identifier_multiprocessing) identifier_multiprocessing (identifier_Process) identifier_Process )attribute (argument_list (keyword_argument (identifier_target) identifier_target (attribute (identifier_self) identifier_self (identifier_worker) identifier_worker )attribute )keyword_argument (keyword_argument (identifier_args) identifier_args (identifier_args) identifier_args )keyword_argument (keyword_argument (identifier_daemon) identifier_daemon (True) True )keyword_argument )argument_list )call (for_in_clause (identifier_i) identifier_i (call (identifier_range) identifier_range (argument_list (attribute (identifier_self) identifier_self (identifier_num_processes) identifier_num_processes )attribute )argument_list )call )for_in_clause )list_comprehension )assignment )expression_statement (for_statement (identifier_process) identifier_process (attribute (identifier_self) identifier_self (identifier_processes) identifier_processes )attribute (block (expression_statement (call (attribute (identifier_process) identifier_process (identifier_start) identifier_start )attribute (argument_list )argument_list )call )expression_statement )block )for_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_log_thread) identifier_log_thread )attribute (call (identifier_LogThread) identifier_LogThread (argument_list (attribute (identifier_self) identifier_self (identifier_log_queue) identifier_log_queue )attribute )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_log_thread) identifier_log_thread )attribute (identifier_start) identifier_start )attribute (argument_list )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_self) identifier_self (identifier_initialize_tasks) identifier_initialize_tasks )attribute (argument_list )argument_list )call )expression_statement )block )function_definition )module
Initialize all queues and start the worker processes and the log thread.
(module (function_definition (function_name_service_timeouts) function_name_service_timeouts (parameters (identifier_cls) identifier_cls )parameters (block (expression_statement (assignment (identifier_timer_manager) identifier_timer_manager (attribute (identifier_cls) identifier_cls (identifier__timers) identifier__timers )attribute )assignment )expression_statement (while_statement (True) True (block (expression_statement (assignment (identifier_next_end) identifier_next_end (call (attribute (identifier_timer_manager) identifier_timer_manager (identifier_service_timeouts) identifier_service_timeouts )attribute (argument_list )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_sleep_time) identifier_sleep_time (conditional_expression (call (identifier_max) identifier_max (argument_list (binary_operator (identifier_next_end) identifier_next_end (call (attribute (identifier_time) identifier_time (identifier_time) identifier_time )attribute (argument_list )argument_list )call )binary_operator (integer_0) integer_0 )argument_list )call (identifier_next_end) identifier_next_end (integer_10000) integer_10000 )conditional_expression )assignment )expression_statement (expression_statement (call (attribute (attribute (identifier_cls) identifier_cls (identifier__new_timer) identifier__new_timer )attribute (identifier_wait) identifier_wait )attribute (argument_list (identifier_sleep_time) identifier_sleep_time )argument_list )call )expression_statement (expression_statement (call (attribute (attribute (identifier_cls) identifier_cls (identifier__new_timer) identifier__new_timer )attribute (identifier_clear) identifier_clear )attribute (argument_list )argument_list )call )expression_statement )block )while_statement )block )function_definition )module
cls._timeout_watcher runs in this loop forever. It is usually waiting for the next timeout on the cls._new_timer Event. When new timers are added, that event is set so that the watcher can wake up and possibly set an earlier timeout.
(module (function_definition (function_name_hasPESignature) function_name_hasPESignature (parameters (identifier_self) identifier_self (identifier_rd) identifier_rd )parameters (block (expression_statement (call (attribute (identifier_rd) identifier_rd (identifier_setOffset) identifier_setOffset )attribute (argument_list (integer_0) integer_0 )argument_list )call )expression_statement (expression_statement (assignment (identifier_e_lfanew_offset) identifier_e_lfanew_offset (subscript (call (identifier_unpack) identifier_unpack (argument_list (string_"<L") string_"<L" (call (attribute (identifier_rd) identifier_rd (identifier_readAt) identifier_readAt )attribute (argument_list (integer_0x3c) integer_0x3c (integer_4) integer_4 )argument_list )call )argument_list )call (integer_0) integer_0 )subscript )assignment )expression_statement (expression_statement (assignment (identifier_sign) identifier_sign (call (attribute (identifier_rd) identifier_rd (identifier_readAt) identifier_readAt )attribute (argument_list (identifier_e_lfanew_offset) identifier_e_lfanew_offset (integer_2) integer_2 )argument_list )call )assignment )expression_statement (if_statement (comparison_operator (identifier_sign) identifier_sign (string_"PE") string_"PE" )comparison_operator (block (return_statement (True) True )return_statement )block )if_statement (return_statement (False) False )return_statement )block )function_definition )module
Check for PE signature. @type rd: L{ReadData} @param rd: A L{ReadData} object. @rtype: bool @return: True is the given L{ReadData} stream has the PE signature. Otherwise, False.
(module (function_definition (function_name_interpret_expenditure_entry) function_name_interpret_expenditure_entry (parameters (identifier_entry) identifier_entry )parameters (block (try_statement (block (expression_statement (assignment (identifier_expenditure_amount) identifier_expenditure_amount (call (identifier_float) identifier_float (argument_list (subscript (identifier_entry) identifier_entry (string_'ExpenditureAmount') string_'ExpenditureAmount' )subscript )argument_list )call )assignment )expression_statement (expression_statement (assignment (subscript (identifier_entry) identifier_entry (string_'AmountsInterpreted') string_'AmountsInterpreted' )subscript (True) True )assignment )expression_statement (expression_statement (assignment (subscript (identifier_entry) identifier_entry (string_'ExpenditureAmount') string_'ExpenditureAmount' )subscript (identifier_expenditure_amount) identifier_expenditure_amount )assignment )expression_statement )block (except_clause (identifier_ValueError) identifier_ValueError (block (expression_statement (assignment (subscript (identifier_entry) identifier_entry (string_'AmountsInterpreted') string_'AmountsInterpreted' )subscript (False) False )assignment )expression_statement )block )except_clause )try_statement (try_statement (block (expression_statement (assignment (identifier_expenditure_date) identifier_expenditure_date (call (identifier_parse_iso_str) identifier_parse_iso_str (argument_list (subscript (identifier_entry) identifier_entry (string_'ExpenditureDate') string_'ExpenditureDate' )subscript )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_filed_date) identifier_filed_date (call (identifier_parse_iso_str) identifier_parse_iso_str (argument_list (subscript (identifier_entry) identifier_entry (string_'FiledDate') string_'FiledDate' )subscript )argument_list )call )assignment )expression_statement (expression_statement (assignment (subscript (identifier_entry) identifier_entry (string_'DatesInterpreted') string_'DatesInterpreted' )subscript (True) True )assignment )expression_statement (expression_statement (assignment (subscript (identifier_entry) identifier_entry (string_'ExpenditureDate') string_'ExpenditureDate' )subscript (identifier_expenditure_date) identifier_expenditure_date )assignment )expression_statement (expression_statement (assignment (subscript (identifier_entry) identifier_entry (string_'FiledDate') string_'FiledDate' )subscript (identifier_filed_date) identifier_filed_date )assignment )expression_statement )block (except_clause (identifier_ValueError) identifier_ValueError (block (expression_statement (assignment (subscript (identifier_entry) identifier_entry (string_'DatesInterpreted') string_'DatesInterpreted' )subscript (False) False )assignment )expression_statement )block )except_clause )try_statement (try_statement (block (expression_statement (assignment (identifier_amended) identifier_amended (call (identifier_parse_yes_no_str) identifier_parse_yes_no_str (argument_list (subscript (identifier_entry) identifier_entry (string_'Amended') string_'Amended' )subscript )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_amendment) identifier_amendment (call (identifier_parse_yes_no_str) identifier_parse_yes_no_str (argument_list (subscript (identifier_entry) identifier_entry (string_'Amendment') string_'Amendment' )subscript )argument_list )call )assignment )expression_statement (expression_statement (assignment (subscript (identifier_entry) identifier_entry (string_'BooleanFieldsInterpreted') string_'BooleanFieldsInterpreted' )subscript (True) True )assignment )expression_statement (expression_statement (assignment (subscript (identifier_entry) identifier_entry (string_'Amended') string_'Amended' )subscript (identifier_amended) identifier_amended )assignment )expression_statement (expression_statement (assignment (subscript (identifier_entry) identifier_entry (string_'Amendment') string_'Amendment' )subscript (identifier_amendment) identifier_amendment )assignment )expression_statement )block (except_clause (identifier_ValueError) identifier_ValueError (block (expression_statement (assignment (subscript (identifier_entry) identifier_entry (string_'BooleanFieldsInterpreted') string_'BooleanFieldsInterpreted' )subscript (False) False )assignment )expression_statement )block )except_clause )try_statement (return_statement (identifier_entry) identifier_entry )return_statement )block )function_definition )module
Interpret data fields within a CO-TRACER expediture report. Interpret the expenditure amount, expenditure date, filed date, amended, and amendment fields of the provided entry. All dates (expenditure and filed) are interpreted together and, if any fails, all will retain their original value. Likewise, amended and amendment are interpreted together and if one is malformed, both will retain their original value. Entry may be edited in place and side-effects are possible in coupled code. However, client code should use the return value to guard against future changes. A value with the key 'AmountsInterpreted' will be set to True or False in the returned entry if floating point values are successfully interpreted (ExpenditureAmount) or not respectively. A value with the key 'DatesInterpreted' will be set to True or False in the returned entry if ISO 8601 strings are successfully interpreted (ExpenditureDate and FiledDate) or not respectively. A value with the key 'BooleanFieldsInterpreted' will be set to True or False in the returned entry if boolean strings are successfully interpreted (Amended and Amendment) or not respectively. @param entry: The expenditure report data to manipulate / interpret. @type entry: dict @return: The entry passed @raise ValueError: Raised if any expected field cannot be found in entry.
(module (function_definition (function_name_kill) function_name_kill (parameters (identifier_self) identifier_self )parameters (block (expression_statement (call (attribute (identifier_BaseShellOperator) identifier_BaseShellOperator (identifier__close_process_input_stdin) identifier__close_process_input_stdin )attribute (argument_list (attribute (attribute (identifier_self) identifier_self (identifier__batcmd) identifier__batcmd )attribute (identifier_batch_to_file_s) identifier_batch_to_file_s )attribute )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_BaseShellOperator) identifier_BaseShellOperator (identifier__wait_process) identifier__wait_process )attribute (argument_list (attribute (identifier_self) identifier_self (identifier__process) identifier__process )attribute (attribute (attribute (identifier_self) identifier_self (identifier__batcmd) identifier__batcmd )attribute (identifier_sh_cmd) identifier_sh_cmd )attribute (attribute (identifier_self) identifier_self (identifier__success_exitcodes) identifier__success_exitcodes )attribute )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_BaseShellOperator) identifier_BaseShellOperator (identifier__rm_process_input_tmpfiles) identifier__rm_process_input_tmpfiles )attribute (argument_list (attribute (attribute (identifier_self) identifier_self (identifier__batcmd) identifier__batcmd )attribute (identifier_batch_to_file_s) identifier_batch_to_file_s )attribute )argument_list )call )expression_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier__process) identifier__process )attribute (None) None )assignment )expression_statement )block )function_definition )module
Kill instantiated process :raises: `AttributeError` if instantiated process doesn't seem to satisfy `constraints <relshell.daemon_shelloperator.DaemonShellOperator>`_
(module (function_definition (function_name_multiply) function_name_multiply (parameters (identifier_x1) identifier_x1 (identifier_x2) identifier_x2 (default_parameter (identifier_output_shape) identifier_output_shape (None) None )default_parameter (default_parameter (identifier_name) identifier_name (None) None )default_parameter )parameters (block (if_statement (not_operator (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_x2) identifier_x2 (identifier_Tensor) identifier_Tensor )argument_list )call )not_operator (block (return_statement (subscript (attribute (call (identifier_ScalarMultiplyOperation) identifier_ScalarMultiplyOperation (argument_list (identifier_x1) identifier_x1 (identifier_x2) identifier_x2 )argument_list )call (identifier_outputs) identifier_outputs )attribute (integer_0) integer_0 )subscript )return_statement )block )if_statement (with_statement (with_clause (with_item (call (attribute (identifier_tf) identifier_tf (identifier_name_scope) identifier_name_scope )attribute (argument_list (identifier_name) identifier_name (keyword_argument (identifier_default_name) identifier_default_name (string_"mul") string_"mul" )keyword_argument )argument_list )call )with_item )with_clause (block (expression_statement (assignment (pattern_list (identifier_x1) identifier_x1 (identifier_x2) identifier_x2 )pattern_list (call (identifier_binary_arguments_to_tensors) identifier_binary_arguments_to_tensors (argument_list (identifier_x1) identifier_x1 (identifier_x2) identifier_x2 )argument_list )call )assignment )expression_statement (return_statement (call (identifier_einsum) identifier_einsum (argument_list (list (identifier_x1) identifier_x1 (identifier_x2) identifier_x2 )list (keyword_argument (identifier_output_shape) identifier_output_shape (call (identifier__infer_binary_broadcast_shape) identifier__infer_binary_broadcast_shape (argument_list (attribute (identifier_x1) identifier_x1 (identifier_shape) identifier_shape )attribute (attribute (identifier_x2) identifier_x2 (identifier_shape) identifier_shape )attribute (identifier_output_shape) identifier_output_shape )argument_list )call )keyword_argument )argument_list )call )return_statement )block )with_statement )block )function_definition )module
Binary multiplication with broadcasting. Args: x1: a Tensor x2: a Tensor output_shape: an optional Shape name: an optional string Returns: a Tensor
(module (function_definition (function_name_dmrs) function_name_dmrs (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_dmrs) identifier_dmrs (call (attribute (identifier_self) identifier_self (identifier_get) identifier_get )attribute (argument_list (string_'dmrs') string_'dmrs' )argument_list )call )assignment )expression_statement (if_statement (comparison_operator (identifier_dmrs) identifier_dmrs (None) None )comparison_operator (block (if_statement (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_dmrs) identifier_dmrs (identifier_dict) identifier_dict )argument_list )call (block (expression_statement (assignment (identifier_dmrs) identifier_dmrs (call (attribute (identifier_Dmrs) identifier_Dmrs (identifier_from_dict) identifier_from_dict )attribute (argument_list (identifier_dmrs) identifier_dmrs )argument_list )call )assignment )expression_statement )block )if_statement )block )if_statement (return_statement (identifier_dmrs) identifier_dmrs )return_statement )block )function_definition )module
Deserialize and return a Dmrs object for JSON-formatted DMRS data; otherwise return the original string.
(module (function_definition (function_name_percentileOfSeries) function_name_percentileOfSeries (parameters (identifier_requestContext) identifier_requestContext (identifier_seriesList) identifier_seriesList (identifier_n) identifier_n (default_parameter (identifier_interpolate) identifier_interpolate (False) False )default_parameter )parameters (block (if_statement (comparison_operator (identifier_n) identifier_n (integer_0) integer_0 )comparison_operator (block (raise_statement (call (identifier_ValueError) identifier_ValueError (argument_list (string_'The requested percent is required to be greater than 0') string_'The requested percent is required to be greater than 0' )argument_list )call )raise_statement )block )if_statement (if_statement (not_operator (identifier_seriesList) identifier_seriesList )not_operator (block (return_statement (list )list )return_statement )block )if_statement (expression_statement (assignment (identifier_name) identifier_name (binary_operator (string_'percentileOfSeries(%s,%g)') string_'percentileOfSeries(%s,%g)' (tuple (attribute (subscript (identifier_seriesList) identifier_seriesList (integer_0) integer_0 )subscript (identifier_pathExpression) identifier_pathExpression )attribute (identifier_n) identifier_n )tuple )binary_operator )assignment )expression_statement (expression_statement (assignment (pattern_list (identifier_start) identifier_start (identifier_end) identifier_end (identifier_step) identifier_step )pattern_list (subscript (call (identifier_normalize) identifier_normalize (argument_list (list (identifier_seriesList) identifier_seriesList )list )argument_list )call (slice (integer_1) integer_1 (colon) colon )slice )subscript )assignment )expression_statement (expression_statement (assignment (identifier_values) identifier_values (list_comprehension (call (identifier__getPercentile) identifier__getPercentile (argument_list (identifier_row) identifier_row (identifier_n) identifier_n (identifier_interpolate) identifier_interpolate )argument_list )call (for_in_clause (identifier_row) identifier_row (call (identifier_zip_longest) identifier_zip_longest (argument_list (list_splat (identifier_seriesList) identifier_seriesList )list_splat )argument_list )call )for_in_clause )list_comprehension )assignment )expression_statement (expression_statement (assignment (identifier_resultSeries) identifier_resultSeries (call (identifier_TimeSeries) identifier_TimeSeries (argument_list (identifier_name) identifier_name (identifier_start) identifier_start (identifier_end) identifier_end (identifier_step) identifier_step (identifier_values) identifier_values )argument_list )call )assignment )expression_statement (expression_statement (assignment (attribute (identifier_resultSeries) identifier_resultSeries (identifier_pathExpression) identifier_pathExpression )attribute (identifier_name) identifier_name )assignment )expression_statement (return_statement (list (identifier_resultSeries) identifier_resultSeries )list )return_statement )block )function_definition )module
percentileOfSeries returns a single series which is composed of the n-percentile values taken across a wildcard series at each point. Unless `interpolate` is set to True, percentile values are actual values contained in one of the supplied series.
(module (function_definition (function_name__set_time) function_name__set_time (parameters (identifier_self) identifier_self (identifier_time) identifier_time )parameters (block (if_statement (comparison_operator (call (identifier_len) identifier_len (argument_list (attribute (identifier_self) identifier_self (identifier_time) identifier_time )attribute )argument_list )call (integer_0) integer_0 )comparison_operator (block (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_time) identifier_time )attribute (call (attribute (identifier_np) identifier_np (identifier_array) identifier_array )attribute (argument_list (identifier_time) identifier_time )argument_list )call )assignment )expression_statement (if_statement (comparison_operator (attribute (identifier_self) identifier_self (identifier_h5) identifier_h5 )attribute (None) None )comparison_operator (block (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_h5) identifier_h5 )attribute (identifier_create_dataset) identifier_create_dataset )attribute (argument_list (string_'time') string_'time' (attribute (attribute (identifier_self) identifier_self (identifier_time) identifier_time )attribute (identifier_shape) identifier_shape )attribute (keyword_argument (identifier_dtype) identifier_dtype (attribute (attribute (identifier_self) identifier_self (identifier_time) identifier_time )attribute (identifier_dtype) identifier_dtype )attribute )keyword_argument (keyword_argument (identifier_data) identifier_data (attribute (identifier_self) identifier_self (identifier_time) identifier_time )attribute )keyword_argument (keyword_argument (identifier_compression) identifier_compression (string_"gzip") string_"gzip" )keyword_argument (keyword_argument (identifier_shuffle) identifier_shuffle (True) True )keyword_argument (keyword_argument (identifier_scaleoffset) identifier_scaleoffset (integer_3) integer_3 )keyword_argument )argument_list )call )expression_statement )block )if_statement )block (else_clause (block (if_statement (parenthesized_expression (comparison_operator (call (identifier_len) identifier_len (argument_list (identifier_time) identifier_time )argument_list )call (call (identifier_len) identifier_len (argument_list (attribute (identifier_self) identifier_self (identifier_time) identifier_time )attribute )argument_list )call )comparison_operator )parenthesized_expression (block (raise_statement (call (identifier_AssertionError) identifier_AssertionError (argument_list (string_"\nTime or number of frame mismatch in input files.\n Exiting...\n") string_"\nTime or number of frame mismatch in input files.\n Exiting...\n" )argument_list )call )raise_statement )block )if_statement )block )else_clause )if_statement )block )function_definition )module
Set time in both class and hdf5 file
(module (function_definition (function_name_should_check_ciphersuites) function_name_should_check_ciphersuites (parameters (identifier_self) identifier_self )parameters (block (if_statement (call (identifier_isinstance) identifier_isinstance (argument_list (attribute (identifier_self) identifier_self (identifier_mykey) identifier_mykey )attribute (identifier_PrivKeyRSA) identifier_PrivKeyRSA )argument_list )call (block (expression_statement (assignment (identifier_kx) identifier_kx (string_"RSA") string_"RSA" )assignment )expression_statement )block (elif_clause (call (identifier_isinstance) identifier_isinstance (argument_list (attribute (identifier_self) identifier_self (identifier_mykey) identifier_mykey )attribute (identifier_PrivKeyECDSA) identifier_PrivKeyECDSA )argument_list )call (block (expression_statement (assignment (identifier_kx) identifier_kx (string_"ECDSA") string_"ECDSA" )assignment )expression_statement )block )elif_clause )if_statement (if_statement (call (identifier_get_usable_ciphersuites) identifier_get_usable_ciphersuites (argument_list (attribute (attribute (identifier_self) identifier_self (identifier_cur_pkt) identifier_cur_pkt )attribute (identifier_ciphers) identifier_ciphers )attribute (identifier_kx) identifier_kx )argument_list )call (block (return_statement )return_statement )block )if_statement (raise_statement (call (attribute (identifier_self) identifier_self (identifier_NO_USABLE_CIPHERSUITE) identifier_NO_USABLE_CIPHERSUITE )attribute (argument_list )argument_list )call )raise_statement )block )function_definition )module
We extract cipher suites candidates from the client's proposition.
(module (function_definition (function_name_service_unavailable) function_name_service_unavailable (parameters (identifier_cls) identifier_cls (default_parameter (identifier_errors) identifier_errors (None) None )default_parameter )parameters (block (if_statement (attribute (identifier_cls) identifier_cls (identifier_expose_status) identifier_expose_status )attribute (block (expression_statement (assignment (attribute (attribute (identifier_cls) identifier_cls (identifier_response) identifier_response )attribute (identifier_content_type) identifier_content_type )attribute (string_'application/json') string_'application/json' )assignment )expression_statement (expression_statement (assignment (attribute (attribute (identifier_cls) identifier_cls (identifier_response) identifier_response )attribute (identifier__status_line) identifier__status_line )attribute (string_'503 Service Unavailable') string_'503 Service Unavailable' )assignment )expression_statement )block )if_statement (return_statement (attribute (call (identifier_cls) identifier_cls (argument_list (integer_503) integer_503 (None) None (identifier_errors) identifier_errors )argument_list )call (identifier_to_json) identifier_to_json )attribute )return_statement )block )function_definition )module
Shortcut API for HTTP 503 `Service Unavailable` response. Args: errors (list): Response key/value data. Returns: WSResponse Instance.
(module (function_definition (function_name_create_event) function_name_create_event (parameters (identifier_title) identifier_title (identifier_event_type) identifier_event_type (default_parameter (identifier_description) identifier_description (string_'') string_'' )default_parameter (default_parameter (identifier_start_time) identifier_start_time (None) None )default_parameter (default_parameter (identifier_end_time) identifier_end_time (None) None )default_parameter (default_parameter (identifier_note) identifier_note (None) None )default_parameter (dictionary_splat_pattern (identifier_rrule_params) identifier_rrule_params )dictionary_splat_pattern )parameters (block (if_statement (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_event_type) identifier_event_type (identifier_tuple) identifier_tuple )argument_list )call (block (expression_statement (assignment (pattern_list (identifier_event_type) identifier_event_type (identifier_created) identifier_created )pattern_list (call (attribute (attribute (identifier_EventType) identifier_EventType (identifier_objects) identifier_objects )attribute (identifier_get_or_create) identifier_get_or_create )attribute (argument_list (keyword_argument (identifier_abbr) identifier_abbr (subscript (identifier_event_type) identifier_event_type (integer_0) integer_0 )subscript )keyword_argument (keyword_argument (identifier_label) identifier_label (subscript (identifier_event_type) identifier_event_type (integer_1) integer_1 )subscript )keyword_argument )argument_list )call )assignment )expression_statement )block )if_statement (expression_statement (assignment (identifier_event) identifier_event (call (attribute (attribute (identifier_Event) identifier_Event (identifier_objects) identifier_objects )attribute (identifier_create) identifier_create )attribute (argument_list (keyword_argument (identifier_title) identifier_title (identifier_title) identifier_title )keyword_argument (keyword_argument (identifier_description) identifier_description (identifier_description) identifier_description )keyword_argument (keyword_argument (identifier_event_type) identifier_event_type (identifier_event_type) identifier_event_type )keyword_argument )argument_list )call )assignment )expression_statement (if_statement (comparison_operator (identifier_note) identifier_note (None) None )comparison_operator (block (expression_statement (call (attribute (attribute (identifier_event) identifier_event (identifier_notes) identifier_notes )attribute (identifier_create) identifier_create )attribute (argument_list (keyword_argument (identifier_note) identifier_note (identifier_note) identifier_note )keyword_argument )argument_list )call )expression_statement )block )if_statement (expression_statement (assignment (identifier_start_time) identifier_start_time (boolean_operator (identifier_start_time) identifier_start_time (call (attribute (call (attribute (identifier_datetime) identifier_datetime (identifier_now) identifier_now )attribute (argument_list )argument_list )call (identifier_replace) identifier_replace )attribute (argument_list (keyword_argument (identifier_minute) identifier_minute (integer_0) integer_0 )keyword_argument (keyword_argument (identifier_second) identifier_second (integer_0) integer_0 )keyword_argument (keyword_argument (identifier_microsecond) identifier_microsecond (integer_0) integer_0 )keyword_argument )argument_list )call )boolean_operator )assignment )expression_statement (expression_statement (assignment (identifier_end_time) identifier_end_time (boolean_operator (identifier_end_time) identifier_end_time (parenthesized_expression (binary_operator (identifier_start_time) identifier_start_time (attribute (identifier_swingtime_settings) identifier_swingtime_settings (identifier_DEFAULT_OCCURRENCE_DURATION) identifier_DEFAULT_OCCURRENCE_DURATION )attribute )binary_operator )parenthesized_expression )boolean_operator )assignment )expression_statement (expression_statement (call (attribute (identifier_event) identifier_event (identifier_add_occurrences) identifier_add_occurrences )attribute (argument_list (identifier_start_time) identifier_start_time (identifier_end_time) identifier_end_time (dictionary_splat (identifier_rrule_params) identifier_rrule_params )dictionary_splat )argument_list )call )expression_statement (return_statement (identifier_event) identifier_event )return_statement )block )function_definition )module
Convenience function to create an ``Event``, optionally create an ``EventType``, and associated ``Occurrence``s. ``Occurrence`` creation rules match those for ``Event.add_occurrences``. Returns the newly created ``Event`` instance. Parameters ``event_type`` can be either an ``EventType`` object or 2-tuple of ``(abbreviation,label)``, from which an ``EventType`` is either created or retrieved. ``start_time`` will default to the current hour if ``None`` ``end_time`` will default to ``start_time`` plus swingtime_settings.DEFAULT_OCCURRENCE_DURATION hour if ``None`` ``freq``, ``count``, ``rrule_params`` follow the ``dateutils`` API (see http://labix.org/python-dateutil)
(module (function_definition (function_name_read) function_name_read (parameters (identifier_self) identifier_self (default_parameter (identifier_amt) identifier_amt (None) None )default_parameter )parameters (block (expression_statement (assignment (identifier_chunk) identifier_chunk (call (attribute (attribute (identifier_self) identifier_self (identifier__raw_stream) identifier__raw_stream )attribute (identifier_read) identifier_read )attribute (argument_list (identifier_amt) identifier_amt )argument_list )call )assignment )expression_statement (expression_statement (augmented_assignment (attribute (identifier_self) identifier_self (identifier__amount_read) identifier__amount_read )attribute (call (identifier_len) identifier_len (argument_list (identifier_chunk) identifier_chunk )argument_list )call )augmented_assignment )expression_statement (return_statement (identifier_chunk) identifier_chunk )return_statement )block )function_definition )module
Read at most amt bytes from the stream. If the amt argument is omitted, read all data.
(module (function_definition (function_name_generate_trajs) function_name_generate_trajs (parameters (identifier_P) identifier_P (identifier_M) identifier_M (identifier_N) identifier_N (default_parameter (identifier_start) identifier_start (None) None )default_parameter (default_parameter (identifier_stop) identifier_stop (None) None )default_parameter (default_parameter (identifier_dt) identifier_dt (integer_1) integer_1 )default_parameter )parameters (block (expression_statement (assignment (identifier_sampler) identifier_sampler (call (identifier_MarkovChainSampler) identifier_MarkovChainSampler (argument_list (identifier_P) identifier_P (keyword_argument (identifier_dt) identifier_dt (identifier_dt) identifier_dt )keyword_argument )argument_list )call )assignment )expression_statement (return_statement (call (attribute (identifier_sampler) identifier_sampler (identifier_trajectories) identifier_trajectories )attribute (argument_list (identifier_M) identifier_M (identifier_N) identifier_N (keyword_argument (identifier_start) identifier_start (identifier_start) identifier_start )keyword_argument (keyword_argument (identifier_stop) identifier_stop (identifier_stop) identifier_stop )keyword_argument )argument_list )call )return_statement )block )function_definition )module
Generates multiple realizations of the Markov chain with transition matrix P. Parameters ---------- P : (n, n) ndarray transition matrix M : int number of trajectories N : int trajectory length start : int, optional, default = None starting state. If not given, will sample from the stationary distribution of P stop : int or int-array-like, optional, default = None stopping set. If given, the trajectory will be stopped before N steps once a state of the stop set is reached dt : int trajectory will be saved every dt time steps. Internally, the dt'th power of P is taken to ensure a more efficient simulation. Returns ------- traj_sliced : (N/dt, ) ndarray A discrete trajectory with length N/dt
(module (function_definition (function_name_set) function_name_set (parameters (identifier_self) identifier_self (identifier_x) identifier_x (identifier_y) identifier_y (identifier_value) identifier_value )parameters (block (expression_statement (assignment (subscript (subscript (attribute (identifier_self) identifier_self (identifier__double_buffer) identifier__double_buffer )attribute (identifier_y) identifier_y )subscript (identifier_x) identifier_x )subscript (identifier_value) identifier_value )assignment )expression_statement )block )function_definition )module
Set the cell value from the specified location :param x: The column (x coord) of the character. :param y: The row (y coord) of the character. :param value: A 5-tuple of (unicode, foreground, attributes, background, width).
(module (function_definition (function_name_is_archive) function_name_is_archive (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_ns_prefix) identifier_ns_prefix (attribute (identifier_self) identifier_self (identifier_archive_namespace) identifier_archive_namespace )attribute )assignment )expression_statement (if_statement (identifier_ns_prefix) identifier_ns_prefix (block (if_statement (comparison_operator (binary_operator (identifier_ns_prefix) identifier_ns_prefix (string_'_archive') string_'_archive' )binary_operator (attribute (attribute (identifier_self) identifier_self (identifier_feed) identifier_feed )attribute (identifier_feed) identifier_feed )attribute )comparison_operator (block (return_statement (True) True )return_statement )block )if_statement (if_statement (comparison_operator (binary_operator (identifier_ns_prefix) identifier_ns_prefix (string_'_current') string_'_current' )binary_operator (attribute (attribute (identifier_self) identifier_self (identifier_feed) identifier_feed )attribute (identifier_feed) identifier_feed )attribute )comparison_operator (block (return_statement (False) False )return_statement )block )if_statement )block )if_statement (expression_statement (assignment (identifier_rels) identifier_rels (call (attribute (identifier_collections) identifier_collections (identifier_defaultdict) identifier_defaultdict )attribute (argument_list (identifier_list) identifier_list )argument_list )call )assignment )expression_statement (for_statement (identifier_link) identifier_link (attribute (attribute (attribute (identifier_self) identifier_self (identifier_feed) identifier_feed )attribute (identifier_feed) identifier_feed )attribute (identifier_links) identifier_links )attribute (block (expression_statement (call (attribute (subscript (identifier_rels) identifier_rels (attribute (identifier_link) identifier_link (identifier_rel) identifier_rel )attribute )subscript (identifier_append) identifier_append )attribute (argument_list (attribute (identifier_link) identifier_link (identifier_href) identifier_href )attribute )argument_list )call )expression_statement )block )for_statement (return_statement (parenthesized_expression (boolean_operator (comparison_operator (string_'current') string_'current' (identifier_rels) identifier_rels )comparison_operator (parenthesized_expression (boolean_operator (comparison_operator (string_'self') string_'self' (identifier_rels) identifier_rels )comparison_operator (comparison_operator (subscript (identifier_rels) identifier_rels (string_'self') string_'self' )subscript (subscript (identifier_rels) identifier_rels (string_'current') string_'current' )subscript )comparison_operator )boolean_operator )parenthesized_expression )boolean_operator )parenthesized_expression )return_statement )block )function_definition )module
Given a parsed feed, returns True if this is an archive feed
(module (function_definition (function_name_contains) function_name_contains (parameters (identifier_self) identifier_self (identifier_item) identifier_item )parameters (block (expression_statement (call (identifier_check_not_none) identifier_check_not_none (argument_list (identifier_item) identifier_item (string_"Value can't be None") string_"Value can't be None" )argument_list )call )expression_statement (expression_statement (assignment (identifier_item_data) identifier_item_data (call (attribute (identifier_self) identifier_self (identifier__to_data) identifier__to_data )attribute (argument_list (identifier_item) identifier_item )argument_list )call )assignment )expression_statement (return_statement (call (attribute (identifier_self) identifier_self (identifier__encode_invoke) identifier__encode_invoke )attribute (argument_list (identifier_set_contains_codec) identifier_set_contains_codec (keyword_argument (identifier_value) identifier_value (identifier_item_data) identifier_item_data )keyword_argument )argument_list )call )return_statement )block )function_definition )module
Determines whether this set contains the specified item or not. :param item: (object), the specified item to be searched. :return: (bool), ``true`` if the specified item exists in this set, ``false`` otherwise.
(module (function_definition (function_name_status) function_name_status (parameters (identifier_self) identifier_self (default_parameter (identifier_jobId) identifier_jobId (None) None )default_parameter (default_parameter (identifier_jobType) identifier_jobType (None) None )default_parameter )parameters (block (expression_statement (assignment (identifier_params) identifier_params (dictionary (pair (string_"f") string_"f" (string_"json") string_"json" )pair )dictionary )assignment )expression_statement (if_statement (comparison_operator (identifier_jobType) identifier_jobType (None) None )comparison_operator (block (expression_statement (assignment (subscript (identifier_params) identifier_params (string_'jobType') string_'jobType' )subscript (identifier_jobType) identifier_jobType )assignment )expression_statement )block )if_statement (if_statement (comparison_operator (identifier_jobId) identifier_jobId (None) None )comparison_operator (block (expression_statement (assignment (subscript (identifier_params) identifier_params (string_"jobId") string_"jobId" )subscript (identifier_jobId) identifier_jobId )assignment )expression_statement )block )if_statement (expression_statement (assignment (identifier_url) identifier_url (binary_operator (string_"%s/status") string_"%s/status" (attribute (identifier_self) identifier_self (identifier_root) identifier_root )attribute )binary_operator )assignment )expression_statement (return_statement (call (attribute (identifier_self) identifier_self (identifier__get) identifier__get )attribute (argument_list (keyword_argument (identifier_url) identifier_url (identifier_url) identifier_url )keyword_argument (keyword_argument (identifier_param_dict) identifier_param_dict (identifier_params) identifier_params )keyword_argument (keyword_argument (identifier_securityHandler) identifier_securityHandler (attribute (identifier_self) identifier_self (identifier__securityHandler) identifier__securityHandler )attribute )keyword_argument (keyword_argument (identifier_proxy_port) identifier_proxy_port (attribute (identifier_self) identifier_self (identifier__proxy_port) identifier__proxy_port )attribute )keyword_argument (keyword_argument (identifier_proxy_url) identifier_proxy_url (attribute (identifier_self) identifier_self (identifier__proxy_url) identifier__proxy_url )attribute )keyword_argument )argument_list )call )return_statement )block )function_definition )module
Inquire about status when publishing an item, adding an item in async mode, or adding with a multipart upload. "Partial" is available for Add Item Multipart, when only a part is uploaded and the item is not committed. Input: jobType The type of asynchronous job for which the status has to be checked. Default is none, which check the item's status. This parameter is optional unless used with the operations listed below. Values: publish, generateFeatures, export, and createService jobId - The job ID returned during publish, generateFeatures, export, and createService calls.
(module (function_definition (function_name_unblock_all) function_name_unblock_all (parameters (identifier_self) identifier_self )parameters (block (expression_statement (call (attribute (identifier_self) identifier_self (identifier_unblock) identifier_unblock )attribute (argument_list )argument_list )call )expression_statement (for_statement (identifier_em) identifier_em (call (attribute (attribute (identifier_self) identifier_self (identifier__emitters) identifier__emitters )attribute (identifier_values) identifier_values )attribute (argument_list )argument_list )call (block (expression_statement (call (attribute (identifier_em) identifier_em (identifier_unblock) identifier_unblock )attribute (argument_list )argument_list )call )expression_statement )block )for_statement )block )function_definition )module
Unblock all emitters in this group.
(module (function_definition (function_name_is_imap) function_name_is_imap (parameters (identifier_self) identifier_self (identifier_JPD) identifier_JPD )parameters (block (if_statement (not_operator (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_JPD) identifier_JPD (identifier_JointProbabilityDistribution) identifier_JointProbabilityDistribution )argument_list )call )not_operator (block (raise_statement (call (identifier_TypeError) identifier_TypeError (argument_list (string_"JPD must be an instance of JointProbabilityDistribution") string_"JPD must be an instance of JointProbabilityDistribution" )argument_list )call )raise_statement )block )if_statement (expression_statement (assignment (identifier_factors) identifier_factors (list_comprehension (call (attribute (identifier_cpd) identifier_cpd (identifier_to_factor) identifier_to_factor )attribute (argument_list )argument_list )call (for_in_clause (identifier_cpd) identifier_cpd (call (attribute (identifier_self) identifier_self (identifier_get_cpds) identifier_get_cpds )attribute (argument_list )argument_list )call )for_in_clause )list_comprehension )assignment )expression_statement (expression_statement (assignment (identifier_factor_prod) identifier_factor_prod (call (identifier_reduce) identifier_reduce (argument_list (identifier_mul) identifier_mul (identifier_factors) identifier_factors )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_JPD_fact) identifier_JPD_fact (call (identifier_DiscreteFactor) identifier_DiscreteFactor (argument_list (attribute (identifier_JPD) identifier_JPD (identifier_variables) identifier_variables )attribute (attribute (identifier_JPD) identifier_JPD (identifier_cardinality) identifier_cardinality )attribute (attribute (identifier_JPD) identifier_JPD (identifier_values) identifier_values )attribute )argument_list )call )assignment )expression_statement (if_statement (comparison_operator (identifier_JPD_fact) identifier_JPD_fact (identifier_factor_prod) identifier_factor_prod )comparison_operator (block (return_statement (True) True )return_statement )block (else_clause (block (return_statement (False) False )return_statement )block )else_clause )if_statement )block )function_definition )module
Checks whether the bayesian model is Imap of given JointProbabilityDistribution Parameters ----------- JPD : An instance of JointProbabilityDistribution Class, for which you want to check the Imap Returns -------- boolean : True if bayesian model is Imap for given Joint Probability Distribution False otherwise Examples -------- >>> from pgmpy.models import BayesianModel >>> from pgmpy.factors.discrete import TabularCPD >>> from pgmpy.factors.discrete import JointProbabilityDistribution >>> G = BayesianModel([('diff', 'grade'), ('intel', 'grade')]) >>> diff_cpd = TabularCPD('diff', 2, [[0.2], [0.8]]) >>> intel_cpd = TabularCPD('intel', 3, [[0.5], [0.3], [0.2]]) >>> grade_cpd = TabularCPD('grade', 3, ... [[0.1,0.1,0.1,0.1,0.1,0.1], ... [0.1,0.1,0.1,0.1,0.1,0.1], ... [0.8,0.8,0.8,0.8,0.8,0.8]], ... evidence=['diff', 'intel'], ... evidence_card=[2, 3]) >>> G.add_cpds(diff_cpd, intel_cpd, grade_cpd) >>> val = [0.01, 0.01, 0.08, 0.006, 0.006, 0.048, 0.004, 0.004, 0.032, 0.04, 0.04, 0.32, 0.024, 0.024, 0.192, 0.016, 0.016, 0.128] >>> JPD = JointProbabilityDistribution(['diff', 'intel', 'grade'], [2, 3, 3], val) >>> G.is_imap(JPD) True
(module (function_definition (function_name_load_template) function_name_load_template (parameters (identifier_name) identifier_name (identifier_directory) identifier_directory (identifier_extension) identifier_extension (identifier_encoding) identifier_encoding (identifier_encoding_errors) identifier_encoding_errors )parameters (block (expression_statement (assignment (identifier_abs_path) identifier_abs_path (call (identifier_get_abs_template_path) identifier_get_abs_template_path (argument_list (identifier_name) identifier_name (identifier_directory) identifier_directory (identifier_extension) identifier_extension )argument_list )call )assignment )expression_statement (return_statement (call (identifier_load_file) identifier_load_file (argument_list (identifier_abs_path) identifier_abs_path (identifier_encoding) identifier_encoding (identifier_encoding_errors) identifier_encoding_errors )argument_list )call )return_statement )block )function_definition )module
Load a template and return its contents as a unicode string.
(module (function_definition (function_name__set_seed) function_name__set_seed (parameters (identifier_self) identifier_self )parameters (block (if_statement (comparison_operator (subscript (attribute (identifier_self) identifier_self (identifier_flags) identifier_flags )attribute (string_'SEED') string_'SEED' )subscript (None) None )comparison_operator (block (expression_statement (call (attribute (identifier_tf) identifier_tf (identifier_set_random_seed) identifier_set_random_seed )attribute (argument_list (subscript (attribute (identifier_self) identifier_self (identifier_flags) identifier_flags )attribute (string_'SEED') string_'SEED' )subscript )argument_list )call )expression_statement (expression_statement (call (attribute (attribute (identifier_np) identifier_np (identifier_random) identifier_random )attribute (identifier_seed) identifier_seed )attribute (argument_list (subscript (attribute (identifier_self) identifier_self (identifier_flags) identifier_flags )attribute (string_'SEED') string_'SEED' )subscript )argument_list )call )expression_statement )block )if_statement )block )function_definition )module
Set random seed for numpy and tensorflow packages
(module (function_definition (function_name_restore) function_name_restore (parameters (identifier_self) identifier_self (identifier_request) identifier_request )parameters (block (expression_statement (call (attribute (attribute (attribute (identifier_self) identifier_self (identifier__connection) identifier__connection )attribute (identifier_connection) identifier_connection )attribute (identifier_rpush) identifier_rpush )attribute (argument_list (attribute (identifier_self) identifier_self (identifier__request_key) identifier__request_key )attribute (call (attribute (identifier_pickle) identifier_pickle (identifier_dumps) identifier_dumps )attribute (argument_list (identifier_request) identifier_request )argument_list )call )argument_list )call )expression_statement )block )function_definition )module
Push the request back onto the queue. Args: request (Request): Reference to a request object that should be pushed back onto the request queue.
(module (function_definition (function_name_emit_save_figure) function_name_emit_save_figure (parameters (identifier_self) identifier_self )parameters (block (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_sig_save_figure) identifier_sig_save_figure )attribute (identifier_emit) identifier_emit )attribute (argument_list (attribute (attribute (identifier_self) identifier_self (identifier_canvas) identifier_canvas )attribute (identifier_fig) identifier_fig )attribute (attribute (attribute (identifier_self) identifier_self (identifier_canvas) identifier_canvas )attribute (identifier_fmt) identifier_fmt )attribute )argument_list )call )expression_statement )block )function_definition )module
Emit a signal when the toolbutton to save the figure is clicked.
(module (function_definition (function_name_dinfdistdown) function_name_dinfdistdown (parameters (identifier_np) identifier_np (identifier_ang) identifier_ang (identifier_fel) identifier_fel (identifier_slp) identifier_slp (identifier_src) identifier_src (identifier_statsm) identifier_statsm (identifier_distm) identifier_distm (identifier_edgecontamination) identifier_edgecontamination (identifier_wg) identifier_wg (identifier_dist) identifier_dist (default_parameter (identifier_workingdir) identifier_workingdir (None) None )default_parameter (default_parameter (identifier_mpiexedir) identifier_mpiexedir (None) None )default_parameter (default_parameter (identifier_exedir) identifier_exedir (None) None )default_parameter (default_parameter (identifier_log_file) identifier_log_file (None) None )default_parameter (default_parameter (identifier_runtime_file) identifier_runtime_file (None) None )default_parameter (default_parameter (identifier_hostfile) identifier_hostfile (None) None )default_parameter )parameters (block (expression_statement (assignment (identifier_in_params) identifier_in_params (dictionary (pair (string_'-m') string_'-m' (binary_operator (string_'%s %s') string_'%s %s' (tuple (call (attribute (identifier_TauDEM) identifier_TauDEM (identifier_convertstatsmethod) identifier_convertstatsmethod )attribute (argument_list (identifier_statsm) identifier_statsm )argument_list )call (call (attribute (identifier_TauDEM) identifier_TauDEM (identifier_convertdistmethod) identifier_convertdistmethod )attribute (argument_list (identifier_distm) identifier_distm )argument_list )call )tuple )binary_operator )pair )dictionary )assignment )expression_statement (if_statement (boolean_operator (call (attribute (identifier_StringClass) identifier_StringClass (identifier_string_match) identifier_string_match )attribute (argument_list (identifier_edgecontamination) identifier_edgecontamination (string_'false') string_'false' )argument_list )call (comparison_operator (identifier_edgecontamination) identifier_edgecontamination (False) False )comparison_operator )boolean_operator (block (expression_statement (assignment (subscript (identifier_in_params) identifier_in_params (string_'-nc') string_'-nc' )subscript (None) None )assignment )expression_statement )block )if_statement (expression_statement (assignment (identifier_fname) identifier_fname (call (attribute (identifier_TauDEM) identifier_TauDEM (identifier_func_name) identifier_func_name )attribute (argument_list (string_'dinfdistdown') string_'dinfdistdown' )argument_list )call )assignment )expression_statement (return_statement (call (attribute (identifier_TauDEM) identifier_TauDEM (identifier_run) identifier_run )attribute (argument_list (call (attribute (identifier_FileClass) identifier_FileClass (identifier_get_executable_fullpath) identifier_get_executable_fullpath )attribute (argument_list (identifier_fname) identifier_fname (identifier_exedir) identifier_exedir )argument_list )call (dictionary (pair (string_'-fel') string_'-fel' (identifier_fel) identifier_fel )pair (pair (string_'-slp') string_'-slp' (identifier_slp) identifier_slp )pair (pair (string_'-ang') string_'-ang' (identifier_ang) identifier_ang )pair (pair (string_'-src') string_'-src' (identifier_src) identifier_src )pair (pair (string_'-wg') string_'-wg' (identifier_wg) identifier_wg )pair )dictionary (identifier_workingdir) identifier_workingdir (identifier_in_params) identifier_in_params (dictionary (pair (string_'-dd') string_'-dd' (identifier_dist) identifier_dist )pair )dictionary (dictionary (pair (string_'mpipath') string_'mpipath' (identifier_mpiexedir) identifier_mpiexedir )pair (pair (string_'hostfile') string_'hostfile' (identifier_hostfile) identifier_hostfile )pair (pair (string_'n') string_'n' (identifier_np) identifier_np )pair )dictionary (dictionary (pair (string_'logfile') string_'logfile' (identifier_log_file) identifier_log_file )pair (pair (string_'runtimefile') string_'runtimefile' (identifier_runtime_file) identifier_runtime_file )pair )dictionary )argument_list )call )return_statement )block )function_definition )module
Run D-inf distance down to stream
(module (function_definition (function_name__generate_placeholder) function_name__generate_placeholder (parameters (default_parameter (identifier_readable_text) identifier_readable_text (None) None )default_parameter )parameters (block (expression_statement (assignment (identifier_name) identifier_name (binary_operator (string_'_interm_') string_'_interm_' (call (identifier_str) identifier_str (argument_list (attribute (identifier_Cache) identifier_Cache (identifier__counter) identifier__counter )attribute )argument_list )call )binary_operator )assignment )expression_statement (expression_statement (augmented_assignment (attribute (identifier_Cache) identifier_Cache (identifier__counter) identifier__counter )attribute (integer_1) integer_1 )augmented_assignment )expression_statement (if_statement (comparison_operator (identifier_readable_text) identifier_readable_text (None) None )comparison_operator (block (assert_statement (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_readable_text) identifier_readable_text (identifier_str) identifier_str )argument_list )call )assert_statement (expression_statement (augmented_assignment (identifier_name) identifier_name (binary_operator (string_'_') string_'_' (identifier_readable_text) identifier_readable_text )binary_operator )augmented_assignment )expression_statement )block )if_statement (return_statement (identifier_name) identifier_name )return_statement )block )function_definition )module
Generate a placeholder name to use while updating WeldObject. Parameters ---------- readable_text : str, optional Appended to the name for a more understandable placeholder. Returns ------- str Placeholder.
(module (function_definition (function_name_uuid_to_slug) function_name_uuid_to_slug (parameters (identifier_uuid) identifier_uuid )parameters (block (if_statement (not_operator (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_uuid) identifier_uuid (identifier_int) identifier_int )argument_list )call )not_operator (block (raise_statement (call (identifier_ArgumentError) identifier_ArgumentError (argument_list (string_"Invalid id that is not an integer") string_"Invalid id that is not an integer" (keyword_argument (identifier_id) identifier_id (identifier_uuid) identifier_uuid )keyword_argument )argument_list )call )raise_statement )block )if_statement (if_statement (boolean_operator (comparison_operator (identifier_uuid) identifier_uuid (integer_0) integer_0 )comparison_operator (comparison_operator (identifier_uuid) identifier_uuid (integer_0x7fffffff) integer_0x7fffffff )comparison_operator )boolean_operator (block (raise_statement (call (identifier_ArgumentError) identifier_ArgumentError (argument_list (string_"Integer should be a positive number and smaller than 0x7fffffff") string_"Integer should be a positive number and smaller than 0x7fffffff" (keyword_argument (identifier_id) identifier_id (identifier_uuid) identifier_uuid )keyword_argument )argument_list )call )raise_statement )block )if_statement (return_statement (call (attribute (string_'--') string_'--' (identifier_join) identifier_join )attribute (argument_list (list (string_'d') string_'d' (call (identifier_int64gid) identifier_int64gid (argument_list (identifier_uuid) identifier_uuid )argument_list )call )list )argument_list )call )return_statement )block )function_definition )module
Return IOTile Cloud compatible Device Slug :param uuid: UUID :return: string in the form of d--0000-0000-0000-0001
(module (function_definition (function_name_exception_to_github) function_name_exception_to_github (parameters (identifier_github_obj_to_comment) identifier_github_obj_to_comment (default_parameter (identifier_summary) identifier_summary (string_"") string_"" )default_parameter )parameters (block (expression_statement (assignment (identifier_context) identifier_context (call (identifier_ExceptionContext) identifier_ExceptionContext (argument_list )argument_list )call )assignment )expression_statement (try_statement (block (expression_statement (yield (identifier_context) identifier_context )yield )expression_statement )block (except_clause (identifier_Exception) identifier_Exception (block (if_statement (identifier_summary) identifier_summary (block (expression_statement (assignment (identifier_summary) identifier_summary (call (attribute (string_": ({})") string_": ({})" (identifier_format) identifier_format )attribute (argument_list (identifier_summary) identifier_summary )argument_list )call )assignment )expression_statement )block )if_statement (expression_statement (assignment (identifier_error_type) identifier_error_type (string_"an unknown error") string_"an unknown error" )assignment )expression_statement (try_statement (block (raise_statement )raise_statement )block (except_clause (as_pattern (identifier_CalledProcessError) identifier_CalledProcessError (as_pattern_target (identifier_err) identifier_err )as_pattern_target )as_pattern (block (expression_statement (assignment (identifier_error_type) identifier_error_type (string_"a Subprocess error") string_"a Subprocess error" )assignment )expression_statement (expression_statement (assignment (identifier_content) identifier_content (call (attribute (string_"Command: {}\n") string_"Command: {}\n" (identifier_format) identifier_format )attribute (argument_list (attribute (identifier_err) identifier_err (identifier_cmd) identifier_cmd )attribute )argument_list )call )assignment )expression_statement (expression_statement (augmented_assignment (identifier_content) identifier_content (call (attribute (string_"Finished with return code {}\n") string_"Finished with return code {}\n" (identifier_format) identifier_format )attribute (argument_list (attribute (identifier_err) identifier_err (identifier_returncode) identifier_returncode )attribute )argument_list )call )augmented_assignment )expression_statement (if_statement (attribute (identifier_err) identifier_err (identifier_output) identifier_output )attribute (block (expression_statement (augmented_assignment (identifier_content) identifier_content (call (attribute (string_"and output:\n```shell\n{}\n```") string_"and output:\n```shell\n{}\n```" (identifier_format) identifier_format )attribute (argument_list (attribute (identifier_err) identifier_err (identifier_output) identifier_output )attribute )argument_list )call )augmented_assignment )expression_statement )block (else_clause (block (expression_statement (augmented_assignment (identifier_content) identifier_content (string_"and no output") string_"and no output" )augmented_assignment )expression_statement )block )else_clause )if_statement )block )except_clause (except_clause (identifier_Exception) identifier_Exception (block (expression_statement (assignment (identifier_content) identifier_content (call (attribute (string_"```python\n{}\n```") string_"```python\n{}\n```" (identifier_format) identifier_format )attribute (argument_list (call (attribute (identifier_traceback) identifier_traceback (identifier_format_exc) identifier_format_exc )attribute (argument_list )argument_list )call )argument_list )call )assignment )expression_statement )block )except_clause )try_statement (expression_statement (assignment (identifier_response) identifier_response (call (attribute (string_"<details><summary>Encountered {}{}</summary><p>\n\n") string_"<details><summary>Encountered {}{}</summary><p>\n\n" (identifier_format) identifier_format )attribute (argument_list (identifier_error_type) identifier_error_type (identifier_summary) identifier_summary )argument_list )call )assignment )expression_statement (expression_statement (augmented_assignment (identifier_response) identifier_response (identifier_content) identifier_content )augmented_assignment )expression_statement (expression_statement (augmented_assignment (identifier_response) identifier_response (string_"\n\n</p></details>") string_"\n\n</p></details>" )augmented_assignment )expression_statement (expression_statement (assignment (attribute (identifier_context) identifier_context (identifier_comment) identifier_comment )attribute (call (identifier_create_comment) identifier_create_comment (argument_list (identifier_github_obj_to_comment) identifier_github_obj_to_comment (identifier_response) identifier_response )argument_list )call )assignment )expression_statement )block )except_clause )try_statement )block )function_definition )module
If any exception comes, log them in the given Github obj.
(module (function_definition (function_name_submit_action) function_name_submit_action (parameters (identifier_self) identifier_self (identifier_ddata) identifier_ddata )parameters (block (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier__controller) identifier__controller )attribute (identifier_post) identifier_post )attribute (argument_list (identifier_ddata) identifier_ddata (keyword_argument (identifier_url) identifier_url (identifier_HOME_ENDPOINT) identifier_HOME_ENDPOINT )keyword_argument (keyword_argument (identifier_referer) identifier_referer (identifier_HOME_ENDPOINT) identifier_HOME_ENDPOINT )keyword_argument )argument_list )call )expression_statement )block )function_definition )module
Post data.
(module (function_definition (function_name__write_buildproc_yaml) function_name__write_buildproc_yaml (parameters (identifier_build_data) identifier_build_data (identifier_env) identifier_env (identifier_user) identifier_user (identifier_cmd) identifier_cmd (identifier_volumes) identifier_volumes (identifier_app_folder) identifier_app_folder )parameters (block (expression_statement (assignment (identifier_buildproc) identifier_buildproc (call (identifier_ProcData) identifier_ProcData (argument_list (dictionary (pair (string_'app_folder') string_'app_folder' (call (identifier_str) identifier_str (argument_list (identifier_app_folder) identifier_app_folder )argument_list )call )pair (pair (string_'app_name') string_'app_name' (attribute (identifier_build_data) identifier_build_data (identifier_app_name) identifier_app_name )attribute )pair (pair (string_'app_repo_url') string_'app_repo_url' (string_'') string_'' )pair (pair (string_'app_repo_type') string_'app_repo_type' (string_'') string_'' )pair (pair (string_'buildpack_url') string_'buildpack_url' (string_'') string_'' )pair (pair (string_'buildpack_version') string_'buildpack_version' (string_'') string_'' )pair (pair (string_'config_name') string_'config_name' (string_'build') string_'build' )pair (pair (string_'env') string_'env' (identifier_env) identifier_env )pair (pair (string_'host') string_'host' (string_'') string_'' )pair (pair (string_'port') string_'port' (integer_0) integer_0 )pair (pair (string_'version') string_'version' (attribute (identifier_build_data) identifier_build_data (identifier_version) identifier_version )attribute )pair (pair (string_'release_hash') string_'release_hash' (string_'') string_'' )pair (pair (string_'settings') string_'settings' (dictionary )dictionary )pair (pair (string_'user') string_'user' (identifier_user) identifier_user )pair (pair (string_'cmd') string_'cmd' (identifier_cmd) identifier_cmd )pair (pair (string_'volumes') string_'volumes' (identifier_volumes) identifier_volumes )pair (pair (string_'proc_name') string_'proc_name' (string_'build') string_'build' )pair (pair (string_'image_name') string_'image_name' (attribute (identifier_build_data) identifier_build_data (identifier_image_name) identifier_image_name )attribute )pair (pair (string_'image_url') string_'image_url' (attribute (identifier_build_data) identifier_build_data (identifier_image_url) identifier_image_url )attribute )pair (pair (string_'image_md5') string_'image_md5' (attribute (identifier_build_data) identifier_build_data (identifier_image_md5) identifier_image_md5 )attribute )pair )dictionary )argument_list )call )assignment )expression_statement (with_statement (with_clause (with_item (as_pattern (call (identifier_open) identifier_open (argument_list (string_'buildproc.yaml') string_'buildproc.yaml' (string_'w') string_'w' )argument_list )call (as_pattern_target (identifier_f) identifier_f )as_pattern_target )as_pattern )with_item )with_clause (block (expression_statement (call (attribute (identifier_f) identifier_f (identifier_write) identifier_write )attribute (argument_list (call (attribute (identifier_buildproc) identifier_buildproc (identifier_as_yaml) identifier_as_yaml )attribute (argument_list )argument_list )call )argument_list )call )expression_statement )block )with_statement (return_statement (call (identifier_get_container_path) identifier_get_container_path (argument_list (identifier_buildproc) identifier_buildproc )argument_list )call )return_statement )block )function_definition )module
Write a proc.yaml for the container and return the container path
(module (function_definition (function_name_getDefaultTMParams) function_name_getDefaultTMParams (parameters (identifier_self) identifier_self (identifier_inputSize) identifier_inputSize (identifier_numInputBits) identifier_numInputBits )parameters (block (expression_statement (assignment (identifier_sampleSize) identifier_sampleSize (call (identifier_int) identifier_int (argument_list (binary_operator (float_1.5) float_1.5 (identifier_numInputBits) identifier_numInputBits )binary_operator )argument_list )call )assignment )expression_statement (if_statement (comparison_operator (identifier_numInputBits) identifier_numInputBits (integer_20) integer_20 )comparison_operator (block (expression_statement (assignment (identifier_activationThreshold) identifier_activationThreshold (integer_18) integer_18 )assignment )expression_statement (expression_statement (assignment (identifier_minThreshold) identifier_minThreshold (integer_18) integer_18 )assignment )expression_statement )block (elif_clause (comparison_operator (identifier_numInputBits) identifier_numInputBits (integer_10) integer_10 )comparison_operator (block (expression_statement (assignment (identifier_activationThreshold) identifier_activationThreshold (integer_8) integer_8 )assignment )expression_statement (expression_statement (assignment (identifier_minThreshold) identifier_minThreshold (integer_8) integer_8 )assignment )expression_statement )block )elif_clause (else_clause (block (expression_statement (assignment (identifier_activationThreshold) identifier_activationThreshold (call (identifier_int) identifier_int (argument_list (binary_operator (identifier_numInputBits) identifier_numInputBits (float_.6) float_.6 )binary_operator )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_minThreshold) identifier_minThreshold (identifier_activationThreshold) identifier_activationThreshold )assignment )expression_statement )block )else_clause )if_statement (return_statement (dictionary (pair (string_"columnCount") string_"columnCount" (identifier_inputSize) identifier_inputSize )pair (pair (string_"cellsPerColumn") string_"cellsPerColumn" (integer_16) integer_16 )pair (pair (string_"learn") string_"learn" (True) True )pair (pair (string_"learnOnOneCell") string_"learnOnOneCell" (False) False )pair (pair (string_"initialPermanence") string_"initialPermanence" (float_0.41) float_0.41 )pair (pair (string_"connectedPermanence") string_"connectedPermanence" (float_0.6) float_0.6 )pair (pair (string_"permanenceIncrement") string_"permanenceIncrement" (float_0.1) float_0.1 )pair (pair (string_"permanenceDecrement") string_"permanenceDecrement" (float_0.03) float_0.03 )pair (pair (string_"minThreshold") string_"minThreshold" (identifier_minThreshold) identifier_minThreshold )pair (pair (string_"basalPredictedSegmentDecrement") string_"basalPredictedSegmentDecrement" (float_0.003) float_0.003 )pair (pair (string_"apicalPredictedSegmentDecrement") string_"apicalPredictedSegmentDecrement" (float_0.0) float_0.0 )pair (pair (string_"reducedBasalThreshold") string_"reducedBasalThreshold" (call (identifier_int) identifier_int (argument_list (binary_operator (identifier_activationThreshold) identifier_activationThreshold (float_0.6) float_0.6 )binary_operator )argument_list )call )pair (pair (string_"activationThreshold") string_"activationThreshold" (identifier_activationThreshold) identifier_activationThreshold )pair (pair (string_"sampleSize") string_"sampleSize" (identifier_sampleSize) identifier_sampleSize )pair (pair (string_"implementation") string_"implementation" (string_"ApicalTiebreak") string_"ApicalTiebreak" )pair (pair (string_"seed") string_"seed" (attribute (identifier_self) identifier_self (identifier_seed) identifier_seed )attribute )pair )dictionary )return_statement )block )function_definition )module
Returns a good default set of parameters to use in the TM region.
(module (function_definition (function_name_Analyze) function_name_Analyze (parameters (identifier_self) identifier_self (identifier_hashes) identifier_hashes )parameters (block (if_statement (not_operator (attribute (identifier_self) identifier_self (identifier__api_key) identifier__api_key )attribute )not_operator (block (raise_statement (call (identifier_RuntimeError) identifier_RuntimeError (argument_list (string_'No API key specified for VirusTotal lookup.') string_'No API key specified for VirusTotal lookup.' )argument_list )call )raise_statement )block )if_statement (expression_statement (assignment (identifier_hash_analyses) identifier_hash_analyses (list )list )assignment )expression_statement (expression_statement (assignment (identifier_json_response) identifier_json_response (boolean_operator (call (attribute (identifier_self) identifier_self (identifier__QueryHashes) identifier__QueryHashes )attribute (argument_list (identifier_hashes) identifier_hashes )argument_list )call (list )list )boolean_operator )assignment )expression_statement (if_statement (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_json_response) identifier_json_response (identifier_dict) identifier_dict )argument_list )call (block (expression_statement (assignment (identifier_json_response) identifier_json_response (list (identifier_json_response) identifier_json_response )list )assignment )expression_statement )block )if_statement (for_statement (identifier_result) identifier_result (identifier_json_response) identifier_json_response (block (expression_statement (assignment (identifier_resource) identifier_resource (subscript (identifier_result) identifier_result (string_'resource') string_'resource' )subscript )assignment )expression_statement (expression_statement (assignment (identifier_hash_analysis) identifier_hash_analysis (call (attribute (identifier_interface) identifier_interface (identifier_HashAnalysis) identifier_HashAnalysis )attribute (argument_list (identifier_resource) identifier_resource (identifier_result) identifier_result )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (identifier_hash_analyses) identifier_hash_analyses (identifier_append) identifier_append )attribute (argument_list (identifier_hash_analysis) identifier_hash_analysis )argument_list )call )expression_statement )block )for_statement (return_statement (identifier_hash_analyses) identifier_hash_analyses )return_statement )block )function_definition )module
Looks up hashes in VirusTotal using the VirusTotal HTTP API. The API is documented here: https://www.virustotal.com/en/documentation/public-api/ Args: hashes (list[str]): hashes to look up. Returns: list[HashAnalysis]: analysis results. Raises: RuntimeError: If the VirusTotal API key has not been set.
(module (function_definition (function_name_header_check) function_name_header_check (parameters (identifier_self) identifier_self (identifier_content) identifier_content )parameters (block (expression_statement (assignment (identifier_encode) identifier_encode (None) None )assignment )expression_statement (expression_statement (assignment (identifier_m) identifier_m (call (attribute (identifier_RE_HTML_ENCODE) identifier_RE_HTML_ENCODE (identifier_search) identifier_search )attribute (argument_list (identifier_content) identifier_content )argument_list )call )assignment )expression_statement (if_statement (identifier_m) identifier_m (block (expression_statement (assignment (identifier_enc) identifier_enc (call (attribute (call (attribute (identifier_m) identifier_m (identifier_group) identifier_group )attribute (argument_list (integer_1) integer_1 )argument_list )call (identifier_decode) identifier_decode )attribute (argument_list (string_'ascii') string_'ascii' )argument_list )call )assignment )expression_statement (try_statement (block (expression_statement (call (attribute (identifier_codecs) identifier_codecs (identifier_getencoder) identifier_getencoder )attribute (argument_list (identifier_enc) identifier_enc )argument_list )call )expression_statement (expression_statement (assignment (identifier_encode) identifier_encode (identifier_enc) identifier_enc )assignment )expression_statement )block (except_clause (identifier_LookupError) identifier_LookupError (block (pass_statement )pass_statement )block )except_clause )try_statement )block (else_clause (block (expression_statement (assignment (identifier_encode) identifier_encode (call (attribute (identifier_self) identifier_self (identifier__has_xml_encode) identifier__has_xml_encode )attribute (argument_list (identifier_content) identifier_content )argument_list )call )assignment )expression_statement )block )else_clause )if_statement (return_statement (identifier_encode) identifier_encode )return_statement )block )function_definition )module
Special HTML encoding check.
(module (function_definition (function_name_serialize) function_name_serialize (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_pickle) identifier_pickle (call (attribute (call (identifier_super) identifier_super (argument_list (identifier_ResourceParameter) identifier_ResourceParameter (identifier_self) identifier_self )argument_list )call (identifier_serialize) identifier_serialize )attribute (argument_list )argument_list )call )assignment )expression_statement (expression_statement (assignment (subscript (identifier_pickle) identifier_pickle (string_'frequency') string_'frequency' )subscript (attribute (identifier_self) identifier_self (identifier_frequency) identifier_frequency )attribute )assignment )expression_statement (expression_statement (assignment (subscript (identifier_pickle) identifier_pickle (string_'unit') string_'unit' )subscript (call (attribute (attribute (identifier_self) identifier_self (identifier__unit) identifier__unit )attribute (identifier_serialize) identifier_serialize )attribute (argument_list )argument_list )call )assignment )expression_statement (return_statement (identifier_pickle) identifier_pickle )return_statement )block )function_definition )module
Convert the parameter into a dictionary. :return: The parameter dictionary. :rtype: dict
(module (function_definition (function_name_migrate) function_name_migrate (parameters (identifier_db) identifier_db (identifier_name) identifier_name (identifier_package) identifier_package (default_parameter (identifier_conf) identifier_conf (dictionary )dictionary )default_parameter )parameters (block (expression_statement (assignment (tuple_pattern (identifier_current_major_version) identifier_current_major_version (identifier_current_minor_version) identifier_current_minor_version )tuple_pattern (call (identifier_get_version) identifier_get_version (argument_list (identifier_db) identifier_db (identifier_name) identifier_name )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_package) identifier_package (call (attribute (identifier_importlib) identifier_importlib (identifier_import_module) identifier_import_module )attribute (argument_list (identifier_package) identifier_package )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (identifier_logging) identifier_logging (identifier_debug) identifier_debug )attribute (argument_list (string_'Migration version for %s is %s.%s') string_'Migration version for %s is %s.%s' (attribute (identifier_package) identifier_package (identifier___name__) identifier___name__ )attribute (identifier_current_major_version) identifier_current_major_version (identifier_current_minor_version) identifier_current_minor_version )argument_list )call )expression_statement (expression_statement (assignment (identifier_mods) identifier_mods (call (identifier_get_mods) identifier_get_mods (argument_list (identifier_package) identifier_package )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_migrations) identifier_migrations (call (identifier_get_new) identifier_get_new (argument_list (identifier_mods) identifier_mods (identifier_current_major_version) identifier_current_major_version (binary_operator (identifier_current_minor_version) identifier_current_minor_version (integer_1) integer_1 )binary_operator )argument_list )call )assignment )expression_statement (for_statement (tuple_pattern (identifier_modname) identifier_modname (identifier_major_version) identifier_major_version (identifier_minor_version) identifier_minor_version )tuple_pattern (identifier_migrations) identifier_migrations (block (expression_statement (assignment (identifier_mod) identifier_mod (call (identifier_load_mod) identifier_load_mod (argument_list (identifier_modname) identifier_modname (identifier_package) identifier_package )argument_list )call )assignment )expression_statement (expression_statement (call (identifier_run_migration) identifier_run_migration (argument_list (identifier_name) identifier_name (identifier_major_version) identifier_major_version (identifier_minor_version) identifier_minor_version (identifier_db) identifier_db (identifier_mod) identifier_mod (identifier_conf) identifier_conf )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_logging) identifier_logging (identifier_debug) identifier_debug )attribute (argument_list (string_"Finished migrating to %s") string_"Finished migrating to %s" (identifier_modname) identifier_modname )argument_list )call )expression_statement )block )for_statement )block )function_definition )module
Run all migrations that have not been run Migrations will be run inside a transaction. :param db: database connection object :param name: name associated with the migrations :param package: package that contains the migrations :param conf: application configuration object
(module (function_definition (function_name_where_session_id) function_name_where_session_id (parameters (identifier_cls) identifier_cls (identifier_session_id) identifier_session_id )parameters (block (try_statement (block (expression_statement (assignment (identifier_session) identifier_session (call (attribute (call (attribute (attribute (identifier_cls) identifier_cls (identifier_query) identifier_query )attribute (identifier_filter_by) identifier_filter_by )attribute (argument_list (keyword_argument (identifier_session_id) identifier_session_id (identifier_session_id) identifier_session_id )keyword_argument )argument_list )call (identifier_one) identifier_one )attribute (argument_list )argument_list )call )assignment )expression_statement (return_statement (identifier_session) identifier_session )return_statement )block (except_clause (tuple (identifier_NoResultFound) identifier_NoResultFound (identifier_MultipleResultsFound) identifier_MultipleResultsFound )tuple (block (return_statement (None) None )return_statement )block )except_clause )try_statement )block )function_definition )module
Easy way to query by session id
(module (function_definition (function_name_get_by_symbol) function_name_get_by_symbol (parameters (identifier_self) identifier_self (typed_parameter (identifier_symbol) identifier_symbol (type (identifier_str) identifier_str )type )typed_parameter )parameters (type (identifier_Commodity) identifier_Commodity )type (block (expression_statement (assignment (identifier_full_symbol) identifier_full_symbol (call (attribute (identifier_self) identifier_self (identifier___parse_gc_symbol) identifier___parse_gc_symbol )attribute (argument_list (identifier_symbol) identifier_symbol )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_query) identifier_query (parenthesized_expression (call (attribute (attribute (identifier_self) identifier_self (identifier_query) identifier_query )attribute (identifier_filter) identifier_filter )attribute (argument_list (comparison_operator (attribute (identifier_Commodity) identifier_Commodity (identifier_mnemonic) identifier_mnemonic )attribute (subscript (identifier_full_symbol) identifier_full_symbol (string_"mnemonic") string_"mnemonic" )subscript )comparison_operator )argument_list )call )parenthesized_expression )assignment )expression_statement (if_statement (subscript (identifier_full_symbol) identifier_full_symbol (string_"namespace") string_"namespace" )subscript (block (expression_statement (assignment (identifier_query) identifier_query (call (attribute (identifier_query) identifier_query (identifier_filter) identifier_filter )attribute (argument_list (comparison_operator (attribute (identifier_Commodity) identifier_Commodity (identifier_namespace) identifier_namespace )attribute (subscript (identifier_full_symbol) identifier_full_symbol (string_"namespace") string_"namespace" )subscript )comparison_operator )argument_list )call )assignment )expression_statement )block )if_statement (return_statement (call (attribute (identifier_query) identifier_query (identifier_first) identifier_first )attribute (argument_list )argument_list )call )return_statement )block )function_definition )module
Returns the commodity with the given symbol. If more are found, an exception will be thrown.
(module (function_definition (function_name__update_names) function_name__update_names (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_d) identifier_d (call (identifier_dict) identifier_dict (argument_list (keyword_argument (identifier_table) identifier_table (attribute (identifier_self) identifier_self (identifier_table_name) identifier_table_name )attribute )keyword_argument (keyword_argument (identifier_time) identifier_time (attribute (identifier_self) identifier_self (identifier_time) identifier_time )attribute )keyword_argument (keyword_argument (identifier_space) identifier_space (attribute (identifier_self) identifier_self (identifier_space) identifier_space )attribute )keyword_argument (keyword_argument (identifier_grain) identifier_grain (attribute (identifier_self) identifier_self (identifier_grain) identifier_grain )attribute )keyword_argument (keyword_argument (identifier_variant) identifier_variant (attribute (identifier_self) identifier_self (identifier_variant) identifier_variant )attribute )keyword_argument (keyword_argument (identifier_segment) identifier_segment (attribute (identifier_self) identifier_self (identifier_segment) identifier_segment )attribute )keyword_argument )argument_list )call )assignment )expression_statement (assert_statement (attribute (identifier_self) identifier_self (identifier_dataset) identifier_dataset )attribute )assert_statement (expression_statement (assignment (identifier_name) identifier_name (call (attribute (call (identifier_PartialPartitionName) identifier_PartialPartitionName (argument_list (dictionary_splat (identifier_d) identifier_d )dictionary_splat )argument_list )call (identifier_promote) identifier_promote )attribute (argument_list (attribute (attribute (attribute (identifier_self) identifier_self (identifier_dataset) identifier_dataset )attribute (identifier_identity) identifier_identity )attribute (identifier_name) identifier_name )attribute )argument_list )call )assignment )expression_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_name) identifier_name )attribute (call (identifier_str) identifier_str (argument_list (attribute (identifier_name) identifier_name (identifier_name) identifier_name )attribute )argument_list )call )assignment )expression_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_vname) identifier_vname )attribute (call (identifier_str) identifier_str (argument_list (attribute (identifier_name) identifier_name (identifier_vname) identifier_vname )attribute )argument_list )call )assignment )expression_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_cache_key) identifier_cache_key )attribute (attribute (identifier_name) identifier_name (identifier_cache_key) identifier_cache_key )attribute )assignment )expression_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_fqname) identifier_fqname )attribute (call (identifier_str) identifier_str (argument_list (attribute (attribute (identifier_self) identifier_self (identifier_identity) identifier_identity )attribute (identifier_fqname) identifier_fqname )attribute )argument_list )call )assignment )expression_statement )block )function_definition )module
Update the derived names
(module (function_definition (function_name_revoke_access_token) function_name_revoke_access_token (parameters (identifier_self) identifier_self (identifier_access_token) identifier_access_token )parameters (block (expression_statement (assignment (identifier_payload) identifier_payload (dictionary (pair (string_'access_token') string_'access_token' (identifier_access_token) identifier_access_token )pair )dictionary )assignment )expression_statement (expression_statement (assignment (identifier_req) identifier_req (call (attribute (identifier_requests) identifier_requests (identifier_post) identifier_post )attribute (argument_list (attribute (identifier_settings) identifier_settings (identifier_API_DEAUTHORIZATION_URL) identifier_API_DEAUTHORIZATION_URL )attribute (keyword_argument (identifier_data) identifier_data (identifier_payload) identifier_payload )keyword_argument )argument_list )call )assignment )expression_statement )block )function_definition )module
Revokes the Access Token by accessing the De-authorization Endpoint of Health Graph API. @param access_token: Access Token for querying Health Graph API.
(module (function_definition (function_name_update) function_name_update (parameters (identifier_self) identifier_self (identifier_other) identifier_other )parameters (block (if_statement (comparison_operator (call (identifier_type) identifier_type (argument_list (identifier_self) identifier_self )argument_list )call (call (identifier_type) identifier_type (argument_list (identifier_other) identifier_other )argument_list )call )comparison_operator (block (return_statement (identifier_NotImplemented) identifier_NotImplemented )return_statement )block (else_clause (block (if_statement (attribute (identifier_other) identifier_other (identifier_bad) identifier_bad )attribute (block (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_error) identifier_error )attribute (attribute (identifier_other) identifier_other (identifier_error) identifier_error )attribute )assignment )expression_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_bad) identifier_bad )attribute (True) True )assignment )expression_statement )block )if_statement (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier__fieldDict) identifier__fieldDict )attribute (identifier_update) identifier_update )attribute (argument_list (attribute (identifier_other) identifier_other (identifier__fieldDict) identifier__fieldDict )attribute )argument_list )call )expression_statement )block )else_clause )if_statement )block )function_definition )module
Adds all the tag-entry pairs from _other_ to the `Grant`. If there is a conflict _other_ takes precedence. # Parameters _other_ : `Grant` > Another `Grant` of the same type as _self_
(module (function_definition (function_name_GetEmail) function_name_GetEmail (parameters (identifier_prompt) identifier_prompt )parameters (block (expression_statement (assignment (identifier_last_email_file_name) identifier_last_email_file_name (call (attribute (attribute (identifier_os) identifier_os (identifier_path) identifier_path )attribute (identifier_expanduser) identifier_expanduser )attribute (argument_list (string_"~/.last_codereview_email_address") string_"~/.last_codereview_email_address" )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_last_email) identifier_last_email (string_"") string_"" )assignment )expression_statement (if_statement (call (attribute (attribute (identifier_os) identifier_os (identifier_path) identifier_path )attribute (identifier_exists) identifier_exists )attribute (argument_list (identifier_last_email_file_name) identifier_last_email_file_name )argument_list )call (block (try_statement (block (expression_statement (assignment (identifier_last_email_file) identifier_last_email_file (call (identifier_open) identifier_open (argument_list (identifier_last_email_file_name) identifier_last_email_file_name (string_"r") string_"r" )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_last_email) identifier_last_email (call (attribute (call (attribute (identifier_last_email_file) identifier_last_email_file (identifier_readline) identifier_readline )attribute (argument_list )argument_list )call (identifier_strip) identifier_strip )attribute (argument_list (string_"\n") string_"\n" )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (identifier_last_email_file) identifier_last_email_file (identifier_close) identifier_close )attribute (argument_list )argument_list )call )expression_statement (expression_statement (augmented_assignment (identifier_prompt) identifier_prompt (binary_operator (string_" [%s]") string_" [%s]" (identifier_last_email) identifier_last_email )binary_operator )augmented_assignment )expression_statement )block (except_clause (identifier_IOError) identifier_IOError (identifier_e) identifier_e (block (pass_statement )pass_statement )block )except_clause )try_statement )block )if_statement (expression_statement (assignment (identifier_email) identifier_email (call (attribute (call (identifier_raw_input) identifier_raw_input (argument_list (binary_operator (identifier_prompt) identifier_prompt (string_": ") string_": " )binary_operator )argument_list )call (identifier_strip) identifier_strip )attribute (argument_list )argument_list )call )assignment )expression_statement (if_statement (identifier_email) identifier_email (block (try_statement (block (expression_statement (assignment (identifier_last_email_file) identifier_last_email_file (call (identifier_open) identifier_open (argument_list (identifier_last_email_file_name) identifier_last_email_file_name (string_"w") string_"w" )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (identifier_last_email_file) identifier_last_email_file (identifier_write) identifier_write )attribute (argument_list (identifier_email) identifier_email )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_last_email_file) identifier_last_email_file (identifier_close) identifier_close )attribute (argument_list )argument_list )call )expression_statement )block (except_clause (identifier_IOError) identifier_IOError (identifier_e) identifier_e (block (pass_statement )pass_statement )block )except_clause )try_statement )block (else_clause (block (expression_statement (assignment (identifier_email) identifier_email (identifier_last_email) identifier_last_email )assignment )expression_statement )block )else_clause )if_statement (return_statement (identifier_email) identifier_email )return_statement )block )function_definition )module
Prompts the user for their email address and returns it. The last used email address is saved to a file and offered up as a suggestion to the user. If the user presses enter without typing in anything the last used email address is used. If the user enters a new address, it is saved for next time we prompt.
(module (function_definition (function_name_bgwrite) function_name_bgwrite (parameters (identifier_fileObj) identifier_fileObj (identifier_data) identifier_data (default_parameter (identifier_closeWhenFinished) identifier_closeWhenFinished (False) False )default_parameter (default_parameter (identifier_chainAfter) identifier_chainAfter (None) None )default_parameter (default_parameter (identifier_ioPrio) identifier_ioPrio (integer_4) integer_4 )default_parameter )parameters (block (expression_statement (assignment (identifier_thread) identifier_thread (call (identifier_BackgroundWriteProcess) identifier_BackgroundWriteProcess (argument_list (identifier_fileObj) identifier_fileObj (identifier_data) identifier_data (identifier_closeWhenFinished) identifier_closeWhenFinished (identifier_chainAfter) identifier_chainAfter (identifier_ioPrio) identifier_ioPrio )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (identifier_thread) identifier_thread (identifier_start) identifier_start )attribute (argument_list )argument_list )call )expression_statement (return_statement (identifier_thread) identifier_thread )return_statement )block )function_definition )module
bgwrite - Start a background writing process @param fileObj <stream> - A stream backed by an fd @param data <str/bytes/list> - The data to write. If a list is given, each successive element will be written to the fileObj and flushed. If a string/bytes is provided, it will be chunked according to the #BackgroundIOPriority chosen. If you would like a different chunking than the chosen ioPrio provides, use #bgwrite_chunk function instead. Chunking makes the data available quicker on the other side, reduces iowait on this side, and thus increases interactivity (at penalty of throughput). @param closeWhenFinished <bool> - If True, the given fileObj will be closed after all the data has been written. Default False. @param chainAfter <None/BackgroundWriteProcess> - If a BackgroundWriteProcess object is provided (the return of bgwrite* functions), this data will be held for writing until the data associated with the provided object has completed writing. Use this to queue several background writes, but retain order within the resulting stream. @return - BackgroundWriteProcess - An object representing the state of this operation. @see BackgroundWriteProcess
(module (function_definition (function_name__list_files_in_path) function_name__list_files_in_path (parameters (identifier_path) identifier_path (default_parameter (identifier_pattern) identifier_pattern (string_"*.stan") string_"*.stan" )default_parameter )parameters (block (expression_statement (assignment (identifier_results) identifier_results (list )list )assignment )expression_statement (for_statement (pattern_list (identifier_dirname) identifier_dirname (identifier_subdirs) identifier_subdirs (identifier_files) identifier_files )pattern_list (call (attribute (identifier_os) identifier_os (identifier_walk) identifier_walk )attribute (argument_list (identifier_path) identifier_path )argument_list )call (block (for_statement (identifier_name) identifier_name (identifier_files) identifier_files (block (if_statement (call (identifier_fnmatch) identifier_fnmatch (argument_list (identifier_name) identifier_name (identifier_pattern) identifier_pattern )argument_list )call (block (expression_statement (call (attribute (identifier_results) identifier_results (identifier_append) identifier_append )attribute (argument_list (call (attribute (attribute (identifier_os) identifier_os (identifier_path) identifier_path )attribute (identifier_join) identifier_join )attribute (argument_list (identifier_dirname) identifier_dirname (identifier_name) identifier_name )argument_list )call )argument_list )call )expression_statement )block )if_statement )block )for_statement )block )for_statement (return_statement (parenthesized_expression (identifier_results) identifier_results )parenthesized_expression )return_statement )block )function_definition )module
indexes a directory of stan files returns as dictionary containing contents of files
(module (function_definition (function_name__wrap_result) function_name__wrap_result (parameters (identifier_name) identifier_name (identifier_data) identifier_data (identifier_sparse_index) identifier_sparse_index (identifier_fill_value) identifier_fill_value (default_parameter (identifier_dtype) identifier_dtype (None) None )default_parameter )parameters (block (if_statement (call (attribute (identifier_name) identifier_name (identifier_startswith) identifier_startswith )attribute (argument_list (string_'__') string_'__' )argument_list )call (block (expression_statement (assignment (identifier_name) identifier_name (subscript (identifier_name) identifier_name (slice (integer_2) integer_2 (colon) colon (unary_operator (integer_2) integer_2 )unary_operator )slice )subscript )assignment )expression_statement )block )if_statement (if_statement (comparison_operator (identifier_name) identifier_name (tuple (string_'eq') string_'eq' (string_'ne') string_'ne' (string_'lt') string_'lt' (string_'gt') string_'gt' (string_'le') string_'le' (string_'ge') string_'ge' )tuple )comparison_operator (block (expression_statement (assignment (identifier_dtype) identifier_dtype (attribute (identifier_np) identifier_np (identifier_bool) identifier_bool )attribute )assignment )expression_statement )block )if_statement (expression_statement (assignment (identifier_fill_value) identifier_fill_value (call (attribute (identifier_lib) identifier_lib (identifier_item_from_zerodim) identifier_item_from_zerodim )attribute (argument_list (identifier_fill_value) identifier_fill_value )argument_list )call )assignment )expression_statement (if_statement (call (identifier_is_bool_dtype) identifier_is_bool_dtype (argument_list (identifier_dtype) identifier_dtype )argument_list )call (block (expression_statement (assignment (identifier_fill_value) identifier_fill_value (call (identifier_bool) identifier_bool (argument_list (identifier_fill_value) identifier_fill_value )argument_list )call )assignment )expression_statement )block )if_statement (return_statement (call (identifier_SparseArray) identifier_SparseArray (argument_list (identifier_data) identifier_data (keyword_argument (identifier_sparse_index) identifier_sparse_index (identifier_sparse_index) identifier_sparse_index )keyword_argument (keyword_argument (identifier_fill_value) identifier_fill_value (identifier_fill_value) identifier_fill_value )keyword_argument (keyword_argument (identifier_dtype) identifier_dtype (identifier_dtype) identifier_dtype )keyword_argument )argument_list )call )return_statement )block )function_definition )module
wrap op result to have correct dtype
(module (function_definition (function_name_path_exists) function_name_path_exists (parameters (identifier_self) identifier_self (identifier_path) identifier_path (default_parameter (identifier_follow_symlinks) identifier_follow_symlinks (True) True )default_parameter )parameters (block (expression_statement (string_"test if path exists") string_"test if path exists" )expression_statement (return_statement (parenthesized_expression (boolean_operator (boolean_operator (call (attribute (identifier_self) identifier_self (identifier_file_exists) identifier_file_exists )attribute (argument_list (identifier_path) identifier_path (identifier_follow_symlinks) identifier_follow_symlinks )argument_list )call (call (attribute (identifier_self) identifier_self (identifier_symlink_exists) identifier_symlink_exists )attribute (argument_list (identifier_path) identifier_path (identifier_follow_symlinks) identifier_follow_symlinks )argument_list )call )boolean_operator (call (attribute (identifier_self) identifier_self (identifier_directory_exists) identifier_directory_exists )attribute (argument_list (identifier_path) identifier_path (identifier_follow_symlinks) identifier_follow_symlinks )argument_list )call )boolean_operator )parenthesized_expression )return_statement )block )function_definition )module
test if path exists
(module (function_definition (function_name_get_books_for_schedule) function_name_get_books_for_schedule (parameters (identifier_self) identifier_self (identifier_schedule) identifier_schedule )parameters (block (expression_statement (assignment (identifier_slns) identifier_slns (call (attribute (identifier_self) identifier_self (identifier__get_slns) identifier__get_slns )attribute (argument_list (identifier_schedule) identifier_schedule )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_books) identifier_books (dictionary )dictionary )assignment )expression_statement (for_statement (identifier_sln) identifier_sln (identifier_slns) identifier_slns (block (try_statement (block (expression_statement (assignment (identifier_section_books) identifier_section_books (call (attribute (identifier_self) identifier_self (identifier_get_books_by_quarter_sln) identifier_get_books_by_quarter_sln )attribute (argument_list (attribute (attribute (identifier_schedule) identifier_schedule (identifier_term) identifier_term )attribute (identifier_quarter) identifier_quarter )attribute (identifier_sln) identifier_sln )argument_list )call )assignment )expression_statement (expression_statement (assignment (subscript (identifier_books) identifier_books (identifier_sln) identifier_sln )subscript (identifier_section_books) identifier_section_books )assignment )expression_statement )block (except_clause (identifier_DataFailureException) identifier_DataFailureException (block (pass_statement )pass_statement )block )except_clause )try_statement )block )for_statement (return_statement (identifier_books) identifier_books )return_statement )block )function_definition )module
Returns a dictionary of data. SLNs are the keys, an array of Book objects are the values.
(module (function_definition (function_name_detect_builtin_shadowing_definitions) function_name_detect_builtin_shadowing_definitions (parameters (identifier_self) identifier_self (identifier_contract) identifier_contract )parameters (block (expression_statement (assignment (identifier_result) identifier_result (list )list )assignment )expression_statement (for_statement (identifier_function) identifier_function (attribute (identifier_contract) identifier_contract (identifier_functions) identifier_functions )attribute (block (if_statement (comparison_operator (attribute (identifier_function) identifier_function (identifier_contract) identifier_contract )attribute (identifier_contract) identifier_contract )comparison_operator (block (if_statement (call (attribute (identifier_self) identifier_self (identifier_is_builtin_symbol) identifier_is_builtin_symbol )attribute (argument_list (attribute (identifier_function) identifier_function (identifier_name) identifier_name )attribute )argument_list )call (block (expression_statement (call (attribute (identifier_result) identifier_result (identifier_append) identifier_append )attribute (argument_list (tuple (attribute (identifier_self) identifier_self (identifier_SHADOWING_FUNCTION) identifier_SHADOWING_FUNCTION )attribute (identifier_function) identifier_function (None) None )tuple )argument_list )call )expression_statement )block )if_statement (expression_statement (augmented_assignment (identifier_result) identifier_result (call (attribute (identifier_self) identifier_self (identifier_detect_builtin_shadowing_locals) identifier_detect_builtin_shadowing_locals )attribute (argument_list (identifier_function) identifier_function )argument_list )call )augmented_assignment )expression_statement )block )if_statement )block )for_statement (for_statement (identifier_modifier) identifier_modifier (attribute (identifier_contract) identifier_contract (identifier_modifiers) identifier_modifiers )attribute (block (if_statement (comparison_operator (attribute (identifier_modifier) identifier_modifier (identifier_contract) identifier_contract )attribute (identifier_contract) identifier_contract )comparison_operator (block (if_statement (call (attribute (identifier_self) identifier_self (identifier_is_builtin_symbol) identifier_is_builtin_symbol )attribute (argument_list (attribute (identifier_modifier) identifier_modifier (identifier_name) identifier_name )attribute )argument_list )call (block (expression_statement (call (attribute (identifier_result) identifier_result (identifier_append) identifier_append )attribute (argument_list (tuple (attribute (identifier_self) identifier_self (identifier_SHADOWING_MODIFIER) identifier_SHADOWING_MODIFIER )attribute (identifier_modifier) identifier_modifier (None) None )tuple )argument_list )call )expression_statement )block )if_statement (expression_statement (augmented_assignment (identifier_result) identifier_result (call (attribute (identifier_self) identifier_self (identifier_detect_builtin_shadowing_locals) identifier_detect_builtin_shadowing_locals )attribute (argument_list (identifier_modifier) identifier_modifier )argument_list )call )augmented_assignment )expression_statement )block )if_statement )block )for_statement (for_statement (identifier_variable) identifier_variable (attribute (identifier_contract) identifier_contract (identifier_variables) identifier_variables )attribute (block (if_statement (comparison_operator (attribute (identifier_variable) identifier_variable (identifier_contract) identifier_contract )attribute (identifier_contract) identifier_contract )comparison_operator (block (if_statement (call (attribute (identifier_self) identifier_self (identifier_is_builtin_symbol) identifier_is_builtin_symbol )attribute (argument_list (attribute (identifier_variable) identifier_variable (identifier_name) identifier_name )attribute )argument_list )call (block (expression_statement (call (attribute (identifier_result) identifier_result (identifier_append) identifier_append )attribute (argument_list (tuple (attribute (identifier_self) identifier_self (identifier_SHADOWING_STATE_VARIABLE) identifier_SHADOWING_STATE_VARIABLE )attribute (identifier_variable) identifier_variable (None) None )tuple )argument_list )call )expression_statement )block )if_statement )block )if_statement )block )for_statement (for_statement (identifier_event) identifier_event (attribute (identifier_contract) identifier_contract (identifier_events) identifier_events )attribute (block (if_statement (comparison_operator (attribute (identifier_event) identifier_event (identifier_contract) identifier_contract )attribute (identifier_contract) identifier_contract )comparison_operator (block (if_statement (call (attribute (identifier_self) identifier_self (identifier_is_builtin_symbol) identifier_is_builtin_symbol )attribute (argument_list (attribute (identifier_event) identifier_event (identifier_name) identifier_name )attribute )argument_list )call (block (expression_statement (call (attribute (identifier_result) identifier_result (identifier_append) identifier_append )attribute (argument_list (tuple (attribute (identifier_self) identifier_self (identifier_SHADOWING_EVENT) identifier_SHADOWING_EVENT )attribute (identifier_event) identifier_event (None) None )tuple )argument_list )call )expression_statement )block )if_statement )block )if_statement )block )for_statement (return_statement (identifier_result) identifier_result )return_statement )block )function_definition )module
Detects if functions, access modifiers, events, state variables, or local variables are named after built-in symbols. Any such definitions are returned in a list. Returns: list of tuple: (type, definition, [local variable parent])
(module (function_definition (function_name_reset) function_name_reset (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_rawdata) identifier_rawdata )attribute (string_'') string_'' )assignment )expression_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_lasttag) identifier_lasttag )attribute (string_'???') string_'???' )assignment )expression_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_interesting) identifier_interesting )attribute (identifier_interesting_normal) identifier_interesting_normal )assignment )expression_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_cdata_elem) identifier_cdata_elem )attribute (None) None )assignment )expression_statement (expression_statement (call (attribute (attribute (identifier__markupbase) identifier__markupbase (identifier_ParserBase) identifier_ParserBase )attribute (identifier_reset) identifier_reset )attribute (argument_list (identifier_self) identifier_self )argument_list )call )expression_statement )block )function_definition )module
Reset this instance. Loses all unprocessed data.
(module (function_definition (function_name_parse) function_name_parse (parameters (identifier_self) identifier_self (identifier_output) identifier_output )parameters (block (expression_statement (assignment (identifier_output) identifier_output (call (attribute (identifier_self) identifier_self (identifier__get_lines_with_stems) identifier__get_lines_with_stems )attribute (argument_list (identifier_output) identifier_output )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_words) identifier_words (call (attribute (identifier_self) identifier_self (identifier__make_unique) identifier__make_unique )attribute (argument_list (identifier_output) identifier_output )argument_list )call )assignment )expression_statement (return_statement (call (attribute (identifier_self) identifier_self (identifier__parse_for_simple_stems) identifier__parse_for_simple_stems )attribute (argument_list (identifier_words) identifier_words )argument_list )call )return_statement )block )function_definition )module
Find stems for a given text.
(module (function_definition (function_name_doc) function_name_doc (parameters (identifier_elt) identifier_elt )parameters (block (expression_statement (string_"Show `show_doc` info in preview window along with link to full docs.") string_"Show `show_doc` info in preview window along with link to full docs." )expression_statement (global_statement (identifier_use_relative_links) identifier_use_relative_links )global_statement (expression_statement (assignment (identifier_use_relative_links) identifier_use_relative_links (False) False )assignment )expression_statement (expression_statement (assignment (identifier_elt) identifier_elt (call (identifier_getattr) identifier_getattr (argument_list (identifier_elt) identifier_elt (string_'__func__') string_'__func__' (identifier_elt) identifier_elt )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_md) identifier_md (call (identifier_show_doc) identifier_show_doc (argument_list (identifier_elt) identifier_elt (keyword_argument (identifier_markdown) identifier_markdown (False) False )keyword_argument )argument_list )call )assignment )expression_statement (if_statement (call (identifier_is_fastai_class) identifier_is_fastai_class (argument_list (identifier_elt) identifier_elt )argument_list )call (block (expression_statement (augmented_assignment (identifier_md) identifier_md (string_f'\n\n<a href="{get_fn_link(elt)}" target="_blank" rel="noreferrer noopener">Show in docs</a>') string_f'\n\n<a href="{get_fn_link(elt)}" target="_blank" rel="noreferrer noopener">Show in docs</a>' )augmented_assignment )expression_statement )block )if_statement (expression_statement (assignment (identifier_output) identifier_output (call (attribute (call (identifier_HTMLExporter) identifier_HTMLExporter (argument_list )argument_list )call (identifier_markdown2html) identifier_markdown2html )attribute (argument_list (identifier_md) identifier_md )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_use_relative_links) identifier_use_relative_links (True) True )assignment )expression_statement (if_statement (identifier_IS_IN_COLAB) identifier_IS_IN_COLAB (block (expression_statement (call (attribute (call (identifier_get_ipython) identifier_get_ipython (argument_list )argument_list )call (identifier_run_cell_magic) identifier_run_cell_magic )attribute (argument_list (string_u'html') string_u'html' (string_u'') string_u'' (identifier_output) identifier_output )argument_list )call )expression_statement )block (else_clause (block (try_statement (block (expression_statement (call (attribute (identifier_page) identifier_page (identifier_page) identifier_page )attribute (argument_list (dictionary (pair (string_'text/html') string_'text/html' (identifier_output) identifier_output )pair )dictionary )argument_list )call )expression_statement )block (except_clause (block (expression_statement (call (identifier_display) identifier_display (argument_list (call (identifier_Markdown) identifier_Markdown (argument_list (identifier_md) identifier_md )argument_list )call )argument_list )call )expression_statement )block )except_clause )try_statement )block )else_clause )if_statement )block )function_definition )module
Show `show_doc` info in preview window along with link to full docs.
(module (function_definition (function_name__collapse) function_name__collapse (parameters (identifier_intervals) identifier_intervals )parameters (block (expression_statement (assignment (identifier_span) identifier_span (None) None )assignment )expression_statement (for_statement (pattern_list (identifier_start) identifier_start (identifier_stop) identifier_stop )pattern_list (identifier_intervals) identifier_intervals (block (if_statement (comparison_operator (identifier_span) identifier_span (None) None )comparison_operator (block (expression_statement (assignment (identifier_span) identifier_span (call (identifier__Interval) identifier__Interval (argument_list (identifier_start) identifier_start (identifier_stop) identifier_stop )argument_list )call )assignment )expression_statement )block (elif_clause (comparison_operator (identifier_start) identifier_start (attribute (identifier_span) identifier_span (identifier_stop) identifier_stop )attribute (identifier_stop) identifier_stop )comparison_operator (block (expression_statement (assignment (identifier_span) identifier_span (call (identifier__Interval) identifier__Interval (argument_list (attribute (identifier_span) identifier_span (identifier_start) identifier_start )attribute (identifier_stop) identifier_stop )argument_list )call )assignment )expression_statement )block )elif_clause (elif_clause (comparison_operator (identifier_start) identifier_start (attribute (identifier_span) identifier_span (identifier_stop) identifier_stop )attribute )comparison_operator (block (expression_statement (yield (identifier_span) identifier_span )yield )expression_statement (expression_statement (assignment (identifier_span) identifier_span (call (identifier__Interval) identifier__Interval (argument_list (identifier_start) identifier_start (identifier_stop) identifier_stop )argument_list )call )assignment )expression_statement )block )elif_clause )if_statement )block )for_statement (if_statement (comparison_operator (identifier_span) identifier_span (None) None )comparison_operator (block (expression_statement (yield (identifier_span) identifier_span )yield )expression_statement )block )if_statement )block )function_definition )module
Collapse an iterable of intervals sorted by start coord.
(module (function_definition (function_name___search_ca_path) function_name___search_ca_path (parameters (identifier_self) identifier_self )parameters (block (if_statement (comparison_operator (string_"X509_CERT_DIR") string_"X509_CERT_DIR" (attribute (identifier_os) identifier_os (identifier_environ) identifier_environ )attribute )comparison_operator (block (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier__ca_path) identifier__ca_path )attribute (subscript (attribute (identifier_os) identifier_os (identifier_environ) identifier_environ )attribute (string_'X509_CERT_DIR') string_'X509_CERT_DIR' )subscript )assignment )expression_statement )block (elif_clause (call (attribute (attribute (identifier_os) identifier_os (identifier_path) identifier_path )attribute (identifier_exists) identifier_exists )attribute (argument_list (string_'/etc/grid-security/certificates') string_'/etc/grid-security/certificates' )argument_list )call (block (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier__ca_path) identifier__ca_path )attribute (string_'/etc/grid-security/certificates') string_'/etc/grid-security/certificates' )assignment )expression_statement )block )elif_clause (else_clause (block (raise_statement (call (identifier_ClientAuthException) identifier_ClientAuthException (argument_list (string_"Could not find a valid CA path") string_"Could not find a valid CA path" )argument_list )call )raise_statement )block )else_clause )if_statement )block )function_definition )module
Get CA Path to check the validity of the server host certificate on the client side
(module (function_definition (function_name_update) function_name_update (parameters (identifier_self) identifier_self (identifier_addr) identifier_addr (identifier_raw_addr) identifier_raw_addr (default_parameter (identifier_name) identifier_name (None) None )default_parameter (default_parameter (identifier_rssi) identifier_rssi (None) None )default_parameter )parameters (block (if_statement (comparison_operator (identifier_addr) identifier_addr (attribute (identifier_self) identifier_self (identifier__devices) identifier__devices )attribute )comparison_operator (block (expression_statement (call (attribute (subscript (attribute (identifier_self) identifier_self (identifier__devices) identifier__devices )attribute (identifier_addr) identifier_addr )subscript (identifier_update) identifier_update )attribute (argument_list (identifier_name) identifier_name (identifier_rssi) identifier_rssi )argument_list )call )expression_statement (return_statement (False) False )return_statement )block (else_clause (block (expression_statement (assignment (subscript (attribute (identifier_self) identifier_self (identifier__devices) identifier__devices )attribute (identifier_addr) identifier_addr )subscript (call (identifier_ScanResult) identifier_ScanResult (argument_list (identifier_addr) identifier_addr (identifier_raw_addr) identifier_raw_addr (identifier_name) identifier_name (identifier_rssi) identifier_rssi )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (identifier_logger) identifier_logger (identifier_debug) identifier_debug )attribute (argument_list (call (attribute (string_'Scan result: {} / {}') string_'Scan result: {} / {}' (identifier_format) identifier_format )attribute (argument_list (identifier_addr) identifier_addr (identifier_name) identifier_name )argument_list )call )argument_list )call )expression_statement (return_statement (True) True )return_statement )block )else_clause )if_statement )block )function_definition )module
Updates the collection of results with a newly received scan response. Args: addr (str): Device hardware address in xx:xx:xx:xx:xx:xx format. raw_addr (bytearray): Device hardware address as raw bytes. name (str): Device name (if available) as ASCII text. May be None. rssi (float): Latest RSSI from the scan result for the device. May be 0. Returns: True if an existing device was updated, False if a new entry was created.
(module (function_definition (function_name_writegroup) function_name_writegroup (parameters (identifier_self) identifier_self (identifier_auth) identifier_auth (identifier_entries) identifier_entries (default_parameter (identifier_defer) identifier_defer (False) False )default_parameter )parameters (block (return_statement (call (attribute (identifier_self) identifier_self (identifier__call) identifier__call )attribute (argument_list (string_'writegroup') string_'writegroup' (identifier_auth) identifier_auth (list (identifier_entries) identifier_entries )list (identifier_defer) identifier_defer )argument_list )call )return_statement )block )function_definition )module
Writes the given values for the respective resources in the list, all writes have same timestamp. Args: auth: cik for authentication. entries: List of key, value lists. eg. [[key, value], [k,v],,,]
(module (function_definition (function_name_moving_hfs_rank) function_name_moving_hfs_rank (parameters (identifier_h) identifier_h (identifier_size) identifier_size (default_parameter (identifier_start) identifier_start (integer_0) integer_0 )default_parameter (default_parameter (identifier_stop) identifier_stop (None) None )default_parameter )parameters (block (expression_statement (assignment (identifier_windows) identifier_windows (call (attribute (identifier_np) identifier_np (identifier_asarray) identifier_asarray )attribute (argument_list (call (identifier_list) identifier_list (argument_list (call (identifier_index_windows) identifier_index_windows (argument_list (identifier_h) identifier_h (keyword_argument (identifier_size) identifier_size (identifier_size) identifier_size )keyword_argument (keyword_argument (identifier_start) identifier_start (identifier_start) identifier_start )keyword_argument (keyword_argument (identifier_stop) identifier_stop (identifier_stop) identifier_stop )keyword_argument (keyword_argument (identifier_step) identifier_step (None) None )keyword_argument )argument_list )call )argument_list )call )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_hr) identifier_hr (call (attribute (identifier_np) identifier_np (identifier_zeros) identifier_zeros )attribute (argument_list (tuple (subscript (attribute (identifier_windows) identifier_windows (identifier_shape) identifier_shape )attribute (integer_0) integer_0 )subscript (subscript (attribute (identifier_h) identifier_h (identifier_shape) identifier_shape )attribute (integer_1) integer_1 )subscript )tuple (keyword_argument (identifier_dtype) identifier_dtype (string_'i4') string_'i4' )keyword_argument )argument_list )call )assignment )expression_statement (for_statement (pattern_list (identifier_i) identifier_i (tuple_pattern (identifier_window_start) identifier_window_start (identifier_window_stop) identifier_window_stop )tuple_pattern )pattern_list (call (identifier_enumerate) identifier_enumerate (argument_list (identifier_windows) identifier_windows )argument_list )call (block (expression_statement (assignment (identifier_hw) identifier_hw (subscript (identifier_h) identifier_h (slice (identifier_window_start) identifier_window_start (colon) colon (identifier_window_stop) identifier_window_stop )slice )subscript )assignment )expression_statement (expression_statement (assignment (identifier_hc) identifier_hc (call (attribute (identifier_hw) identifier_hw (identifier_distinct_counts) identifier_distinct_counts )attribute (argument_list )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (identifier_hc) identifier_hc (identifier_sort) identifier_sort )attribute (argument_list )argument_list )call )expression_statement (expression_statement (assignment (identifier_hc) identifier_hc (subscript (identifier_hc) identifier_hc (slice (colon) colon (colon) colon (unary_operator (integer_1) integer_1 )unary_operator )slice )subscript )assignment )expression_statement (expression_statement (assignment (identifier_cp) identifier_cp (integer_0) integer_0 )assignment )expression_statement (for_statement (pattern_list (identifier_j) identifier_j (identifier_c) identifier_c )pattern_list (call (identifier_enumerate) identifier_enumerate (argument_list (identifier_hc) identifier_hc )argument_list )call (block (if_statement (comparison_operator (identifier_c) identifier_c (integer_1) integer_1 )comparison_operator (block (expression_statement (assignment (subscript (identifier_hr) identifier_hr (identifier_i) identifier_i (slice (identifier_cp) identifier_cp (colon) colon (binary_operator (identifier_cp) identifier_cp (identifier_c) identifier_c )binary_operator )slice )subscript (binary_operator (identifier_j) identifier_j (integer_1) integer_1 )binary_operator )assignment )expression_statement )block )if_statement (expression_statement (augmented_assignment (identifier_cp) identifier_cp (identifier_c) identifier_c )augmented_assignment )expression_statement )block )for_statement )block )for_statement (return_statement (identifier_hr) identifier_hr )return_statement )block )function_definition )module
Helper function for plotting haplotype frequencies in moving windows. Parameters ---------- h : array_like, int, shape (n_variants, n_haplotypes) Haplotype array. size : int The window size (number of variants). start : int, optional The index at which to start. stop : int, optional The index at which to stop. Returns ------- hr : ndarray, int, shape (n_windows, n_haplotypes) Haplotype rank array.
(module (function_definition (function_name_change_subscription) function_name_change_subscription (parameters (identifier_self) identifier_self (identifier_topics) identifier_topics )parameters (block (if_statement (attribute (identifier_self) identifier_self (identifier__user_assignment) identifier__user_assignment )attribute (block (raise_statement (call (identifier_IllegalStateError) identifier_IllegalStateError (argument_list (attribute (identifier_self) identifier_self (identifier__SUBSCRIPTION_EXCEPTION_MESSAGE) identifier__SUBSCRIPTION_EXCEPTION_MESSAGE )attribute )argument_list )call )raise_statement )block )if_statement (if_statement (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_topics) identifier_topics (attribute (identifier_six) identifier_six (identifier_string_types) identifier_string_types )attribute )argument_list )call (block (expression_statement (assignment (identifier_topics) identifier_topics (list (identifier_topics) identifier_topics )list )assignment )expression_statement )block )if_statement (if_statement (comparison_operator (attribute (identifier_self) identifier_self (identifier_subscription) identifier_subscription )attribute (call (identifier_set) identifier_set (argument_list (identifier_topics) identifier_topics )argument_list )call )comparison_operator (block (expression_statement (call (attribute (identifier_log) identifier_log (identifier_warning) identifier_warning )attribute (argument_list (string_"subscription unchanged by change_subscription(%s)") string_"subscription unchanged by change_subscription(%s)" (identifier_topics) identifier_topics )argument_list )call )expression_statement (return_statement )return_statement )block )if_statement (for_statement (identifier_t) identifier_t (identifier_topics) identifier_topics (block (expression_statement (call (attribute (identifier_self) identifier_self (identifier__ensure_valid_topic_name) identifier__ensure_valid_topic_name )attribute (argument_list (identifier_t) identifier_t )argument_list )call )expression_statement )block )for_statement (expression_statement (call (attribute (identifier_log) identifier_log (identifier_info) identifier_info )attribute (argument_list (string_'Updating subscribed topics to: %s') string_'Updating subscribed topics to: %s' (identifier_topics) identifier_topics )argument_list )call )expression_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_subscription) identifier_subscription )attribute (call (identifier_set) identifier_set (argument_list (identifier_topics) identifier_topics )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier__group_subscription) identifier__group_subscription )attribute (identifier_update) identifier_update )attribute (argument_list (identifier_topics) identifier_topics )argument_list )call )expression_statement (for_statement (identifier_tp) identifier_tp (call (identifier_set) identifier_set (argument_list (call (attribute (attribute (identifier_self) identifier_self (identifier_assignment) identifier_assignment )attribute (identifier_keys) identifier_keys )attribute (argument_list )argument_list )call )argument_list )call (block (if_statement (comparison_operator (attribute (identifier_tp) identifier_tp (identifier_topic) identifier_topic )attribute (attribute (identifier_self) identifier_self (identifier_subscription) identifier_subscription )attribute )comparison_operator (block (delete_statement (subscript (attribute (identifier_self) identifier_self (identifier_assignment) identifier_assignment )attribute (identifier_tp) identifier_tp )subscript )delete_statement )block )if_statement )block )for_statement )block )function_definition )module
Change the topic subscription. Arguments: topics (list of str): topics for subscription Raises: IllegalStateErrror: if assign_from_user has been used already TypeError: if a topic is None or a non-str ValueError: if a topic is an empty string or - a topic name is '.' or '..' or - a topic name does not consist of ASCII-characters/'-'/'_'/'.'
(module (function_definition (function_name_get_notebook_daemon_command) function_name_get_notebook_daemon_command (parameters (identifier_self) identifier_self (identifier_name) identifier_name (identifier_action) identifier_action (default_parameter (identifier_port) identifier_port (integer_0) integer_0 )default_parameter (list_splat_pattern (identifier_extra) identifier_extra )list_splat_pattern )parameters (block (return_statement (binary_operator (list (attribute (identifier_self) identifier_self (identifier_python) identifier_python )attribute (attribute (identifier_self) identifier_self (identifier_cmd) identifier_cmd )attribute (identifier_action) identifier_action (call (attribute (identifier_self) identifier_self (identifier_get_pid) identifier_get_pid )attribute (argument_list (identifier_name) identifier_name )argument_list )call (call (attribute (identifier_self) identifier_self (identifier_get_work_folder) identifier_get_work_folder )attribute (argument_list (identifier_name) identifier_name )argument_list )call (identifier_port) identifier_port (attribute (identifier_self) identifier_self (identifier_kill_timeout) identifier_kill_timeout )attribute )list (call (identifier_list) identifier_list (argument_list (identifier_extra) identifier_extra )argument_list )call )binary_operator )return_statement )block )function_definition )module
Assume we launch Notebook with the same Python which executed us.
(module (function_definition (function_name_register) function_name_register (parameters (identifier_self) identifier_self )parameters (block (expression_statement (call (attribute (identifier_log) identifier_log (identifier_info) identifier_info )attribute (argument_list (binary_operator (string_'Installing ssh key, %s') string_'Installing ssh key, %s' (attribute (identifier_self) identifier_self (identifier_name) identifier_name )attribute )binary_operator )argument_list )call )expression_statement (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_consul) identifier_consul )attribute (identifier_create_ssh_pub_key) identifier_create_ssh_pub_key )attribute (argument_list (attribute (identifier_self) identifier_self (identifier_name) identifier_name )attribute (attribute (identifier_self) identifier_self (identifier_key) identifier_key )attribute )argument_list )call )expression_statement )block )function_definition )module
Registers SSH key with provider.
(module (function_definition (function_name__create_label) function_name__create_label (parameters (identifier_self) identifier_self (identifier_array) identifier_array )parameters (block (if_statement (comparison_operator (call (identifier_len) identifier_len (argument_list (attribute (identifier_array) identifier_array (identifier_shape) identifier_shape )attribute )argument_list )call (integer_3) integer_3 )comparison_operator (block (expression_statement (assignment (identifier_bands) identifier_bands (subscript (attribute (identifier_array) identifier_array (identifier_shape) identifier_shape )attribute (integer_0) integer_0 )subscript )assignment )expression_statement (expression_statement (assignment (identifier_lines) identifier_lines (subscript (attribute (identifier_array) identifier_array (identifier_shape) identifier_shape )attribute (integer_1) integer_1 )subscript )assignment )expression_statement (expression_statement (assignment (identifier_line_samples) identifier_line_samples (subscript (attribute (identifier_array) identifier_array (identifier_shape) identifier_shape )attribute (integer_2) integer_2 )subscript )assignment )expression_statement )block (else_clause (block (expression_statement (assignment (identifier_bands) identifier_bands (integer_1) integer_1 )assignment )expression_statement (expression_statement (assignment (identifier_lines) identifier_lines (subscript (attribute (identifier_array) identifier_array (identifier_shape) identifier_shape )attribute (integer_0) integer_0 )subscript )assignment )expression_statement (expression_statement (assignment (identifier_line_samples) identifier_line_samples (subscript (attribute (identifier_array) identifier_array (identifier_shape) identifier_shape )attribute (integer_1) integer_1 )subscript )assignment )expression_statement )block )else_clause )if_statement (expression_statement (assignment (identifier_record_bytes) identifier_record_bytes (binary_operator (identifier_line_samples) identifier_line_samples (attribute (identifier_array) identifier_array (identifier_itemsize) identifier_itemsize )attribute )binary_operator )assignment )expression_statement (expression_statement (assignment (identifier_label_module) identifier_label_module (call (attribute (identifier_pvl) identifier_pvl (identifier_PVLModule) identifier_PVLModule )attribute (argument_list (list (tuple (string_'PDS_VERSION_ID') string_'PDS_VERSION_ID' (string_'PDS3') string_'PDS3' )tuple (tuple (string_'RECORD_TYPE') string_'RECORD_TYPE' (string_'FIXED_LENGTH') string_'FIXED_LENGTH' )tuple (tuple (string_'RECORD_BYTES') string_'RECORD_BYTES' (identifier_record_bytes) identifier_record_bytes )tuple (tuple (string_'LABEL_RECORDS') string_'LABEL_RECORDS' (integer_1) integer_1 )tuple (tuple (string_'^IMAGE') string_'^IMAGE' (integer_1) integer_1 )tuple (tuple (string_'IMAGE') string_'IMAGE' (dictionary (pair (string_'BANDS') string_'BANDS' (identifier_bands) identifier_bands )pair (pair (string_'LINES') string_'LINES' (identifier_lines) identifier_lines )pair (pair (string_'LINE_SAMPLES') string_'LINE_SAMPLES' (identifier_line_samples) identifier_line_samples )pair (pair (string_'MAXIMUM') string_'MAXIMUM' (integer_0) integer_0 )pair (pair (string_'MEAN') string_'MEAN' (integer_0) integer_0 )pair (pair (string_'MEDIAN') string_'MEDIAN' (integer_0) integer_0 )pair (pair (string_'MINIMUM') string_'MINIMUM' (integer_0) integer_0 )pair (pair (string_'SAMPLE_BITS') string_'SAMPLE_BITS' (binary_operator (attribute (identifier_array) identifier_array (identifier_itemsize) identifier_itemsize )attribute (integer_8) integer_8 )binary_operator )pair (pair (string_'SAMPLE_TYPE') string_'SAMPLE_TYPE' (string_'MSB_INTEGER') string_'MSB_INTEGER' )pair (pair (string_'STANDARD_DEVIATION') string_'STANDARD_DEVIATION' (integer_0) integer_0 )pair )dictionary )tuple )list )argument_list )call )assignment )expression_statement (return_statement (call (attribute (identifier_self) identifier_self (identifier__update_label) identifier__update_label )attribute (argument_list (identifier_label_module) identifier_label_module (identifier_array) identifier_array )argument_list )call )return_statement )block )function_definition )module
Create sample PDS3 label for NumPy Array. It is called by 'image.py' to create PDS3Image object from Numpy Array. Returns ------- PVLModule label for the given NumPy array. Usage: self.label = _create_label(array)
(module (function_definition (function_name_first_time_setup) function_name_first_time_setup (parameters (identifier_self) identifier_self )parameters (block (if_statement (not_operator (call (attribute (identifier_self) identifier_self (identifier__auto_unlock_key_position) identifier__auto_unlock_key_position )attribute (argument_list )argument_list )call )not_operator (block (expression_statement (assignment (identifier_pw) identifier_pw (subscript (call (attribute (identifier_password) identifier_password (identifier_create_passwords) identifier_create_passwords )attribute (argument_list )argument_list )call (integer_0) integer_0 )subscript )assignment )expression_statement (expression_statement (assignment (identifier_attrs) identifier_attrs (dictionary (pair (string_'application') string_'application' (attribute (identifier_self) identifier_self (identifier_keyring) identifier_keyring )attribute )pair )dictionary )assignment )expression_statement (expression_statement (call (attribute (identifier_gkr) identifier_gkr (identifier_item_create_sync) identifier_item_create_sync )attribute (argument_list (attribute (identifier_self) identifier_self (identifier_default_keyring) identifier_default_keyring )attribute (attribute (identifier_gkr) identifier_gkr (identifier_ITEM_GENERIC_SECRET) identifier_ITEM_GENERIC_SECRET )attribute (attribute (identifier_self) identifier_self (identifier_keyring) identifier_keyring )attribute (identifier_attrs) identifier_attrs (identifier_pw) identifier_pw (True) True )argument_list )call )expression_statement )block )if_statement (expression_statement (assignment (identifier_found_pos) identifier_found_pos (call (attribute (identifier_self) identifier_self (identifier__auto_unlock_key_position) identifier__auto_unlock_key_position )attribute (argument_list )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_item_info) identifier_item_info (call (attribute (identifier_gkr) identifier_gkr (identifier_item_get_info_sync) identifier_item_get_info_sync )attribute (argument_list (attribute (identifier_self) identifier_self (identifier_default_keyring) identifier_default_keyring )attribute (identifier_found_pos) identifier_found_pos )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (identifier_gkr) identifier_gkr (identifier_create_sync) identifier_create_sync )attribute (argument_list (attribute (identifier_self) identifier_self (identifier_keyring) identifier_keyring )attribute (call (attribute (identifier_item_info) identifier_item_info (identifier_get_secret) identifier_get_secret )attribute (argument_list )argument_list )call )argument_list )call )expression_statement )block )function_definition )module
First time running Open Sesame? Create keyring and an auto-unlock key in default keyring. Make sure these things don't already exist.
(module (function_definition (function_name_access_elementusers) function_name_access_elementusers (parameters (identifier_self) identifier_self (identifier_elementuser_id) identifier_elementuser_id (default_parameter (identifier_access_id) identifier_access_id (None) None )default_parameter (default_parameter (identifier_tenant_id) identifier_tenant_id (None) None )default_parameter (default_parameter (identifier_api_version) identifier_api_version (string_"v2.0") string_"v2.0" )default_parameter )parameters (block (if_statement (boolean_operator (comparison_operator (identifier_tenant_id) identifier_tenant_id (None) None )comparison_operator (attribute (attribute (identifier_self) identifier_self (identifier__parent_class) identifier__parent_class )attribute (identifier_tenant_id) identifier_tenant_id )attribute )boolean_operator (block (expression_statement (assignment (identifier_tenant_id) identifier_tenant_id (attribute (attribute (identifier_self) identifier_self (identifier__parent_class) identifier__parent_class )attribute (identifier_tenant_id) identifier_tenant_id )attribute )assignment )expression_statement )block (elif_clause (not_operator (identifier_tenant_id) identifier_tenant_id )not_operator (block (raise_statement (call (identifier_TypeError) identifier_TypeError (argument_list (string_"tenant_id is required but not set or cached.") string_"tenant_id is required but not set or cached." )argument_list )call )raise_statement )block )elif_clause )if_statement (expression_statement (assignment (identifier_cur_ctlr) identifier_cur_ctlr (attribute (attribute (identifier_self) identifier_self (identifier__parent_class) identifier__parent_class )attribute (identifier_controller) identifier_controller )attribute )assignment )expression_statement (if_statement (not_operator (identifier_access_id) identifier_access_id )not_operator (block (expression_statement (assignment (identifier_url) identifier_url (binary_operator (call (identifier_str) identifier_str (argument_list (identifier_cur_ctlr) identifier_cur_ctlr )argument_list )call (call (attribute (string_"/{}/api/tenants/{}/elementusers/{}/access") string_"/{}/api/tenants/{}/elementusers/{}/access" (identifier_format) identifier_format )attribute (argument_list (identifier_api_version) identifier_api_version (identifier_tenant_id) identifier_tenant_id (identifier_elementuser_id) identifier_elementuser_id )argument_list )call )binary_operator )assignment )expression_statement )block (else_clause (block (expression_statement (assignment (identifier_url) identifier_url (binary_operator (call (identifier_str) identifier_str (argument_list (identifier_cur_ctlr) identifier_cur_ctlr )argument_list )call (call (attribute (string_"/{}/api/tenants/{}/elementusers/{}/access/{}") string_"/{}/api/tenants/{}/elementusers/{}/access/{}" (identifier_format) identifier_format )attribute (argument_list (identifier_api_version) identifier_api_version (identifier_tenant_id) identifier_tenant_id (identifier_elementuser_id) identifier_elementuser_id (identifier_access_id) identifier_access_id )argument_list )call )binary_operator )assignment )expression_statement )block )else_clause )if_statement (expression_statement (call (attribute (identifier_api_logger) identifier_api_logger (identifier_debug) identifier_debug )attribute (argument_list (string_"URL = %s") string_"URL = %s" (identifier_url) identifier_url )argument_list )call )expression_statement (return_statement (call (attribute (attribute (identifier_self) identifier_self (identifier__parent_class) identifier__parent_class )attribute (identifier_rest_call) identifier_rest_call )attribute (argument_list (identifier_url) identifier_url (string_"get") string_"get" )argument_list )call )return_statement )block )function_definition )module
Get all accesses for a particular user **Parameters:**: - **elementuser_id**: Element User ID - **access_id**: (optional) Access ID - **tenant_id**: Tenant ID - **api_version**: API version to use (default v2.0) **Returns:** requests.Response object extended with cgx_status and cgx_content properties.
(module (function_definition (function_name_removepage) function_name_removepage (parameters (identifier_self) identifier_self (identifier_page) identifier_page )parameters (block (try_statement (block (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier__api_entrypoint) identifier__api_entrypoint )attribute (identifier_removePage) identifier_removePage )attribute (argument_list (attribute (identifier_self) identifier_self (identifier__session_token) identifier__session_token )attribute (identifier_page) identifier_page )argument_list )call )expression_statement )block (except_clause (as_pattern (identifier_XMLRPCError) identifier_XMLRPCError (as_pattern_target (identifier_e) identifier_e )as_pattern_target )as_pattern (block (raise_statement (call (identifier_ConfluenceError) identifier_ConfluenceError (argument_list (binary_operator (string_'Failed to delete page: %s') string_'Failed to delete page: %s' (identifier_e) identifier_e )binary_operator )argument_list )call )raise_statement )block )except_clause )try_statement )block )function_definition )module
Deletes a page from confluence. raises ConfluenceError if the page could not be removed.
(module (function_definition (function_name_init_recorder) function_name_init_recorder (parameters (identifier_self) identifier_self (identifier_recorder_config) identifier_recorder_config )parameters (block (if_statement (not_operator (identifier_recorder_config) identifier_recorder_config )not_operator (block (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_recorder) identifier_recorder )attribute (None) None )assignment )expression_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_recorder_path) identifier_recorder_path )attribute (None) None )assignment )expression_statement (return_statement )return_statement )block )if_statement (if_statement (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_recorder_config) identifier_recorder_config (identifier_str) identifier_str )argument_list )call (block (expression_statement (assignment (identifier_recorder_coll) identifier_recorder_coll (identifier_recorder_config) identifier_recorder_config )assignment )expression_statement (expression_statement (assignment (identifier_recorder_config) identifier_recorder_config (dictionary )dictionary )assignment )expression_statement )block (else_clause (block (expression_statement (assignment (identifier_recorder_coll) identifier_recorder_coll (subscript (identifier_recorder_config) identifier_recorder_config (string_'source_coll') string_'source_coll' )subscript )assignment )expression_statement )block )else_clause )if_statement (expression_statement (assignment (identifier_dedup_index) identifier_dedup_index (None) None )assignment )expression_statement (expression_statement (assignment (identifier_warc_writer) identifier_warc_writer (call (identifier_MultiFileWARCWriter) identifier_MultiFileWARCWriter (argument_list (attribute (attribute (identifier_self) identifier_self (identifier_warcserver) identifier_warcserver )attribute (identifier_archive_paths) identifier_archive_paths )attribute (keyword_argument (identifier_max_size) identifier_max_size (call (identifier_int) identifier_int (argument_list (call (attribute (identifier_recorder_config) identifier_recorder_config (identifier_get) identifier_get )attribute (argument_list (string_'rollover_size') string_'rollover_size' (integer_1000000000) integer_1000000000 )argument_list )call )argument_list )call )keyword_argument (keyword_argument (identifier_max_idle_secs) identifier_max_idle_secs (call (identifier_int) identifier_int (argument_list (call (attribute (identifier_recorder_config) identifier_recorder_config (identifier_get) identifier_get )attribute (argument_list (string_'rollover_idle_secs') string_'rollover_idle_secs' (integer_600) integer_600 )argument_list )call )argument_list )call )keyword_argument (keyword_argument (identifier_filename_template) identifier_filename_template (call (attribute (identifier_recorder_config) identifier_recorder_config (identifier_get) identifier_get )attribute (argument_list (string_'filename_template') string_'filename_template' )argument_list )call )keyword_argument (keyword_argument (identifier_dedup_index) identifier_dedup_index (identifier_dedup_index) identifier_dedup_index )keyword_argument )argument_list )call )assignment )expression_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_recorder) identifier_recorder )attribute (call (identifier_RecorderApp) identifier_RecorderApp (argument_list (binary_operator (attribute (identifier_self) identifier_self (identifier_RECORD_SERVER) identifier_RECORD_SERVER )attribute (call (identifier_str) identifier_str (argument_list (attribute (attribute (identifier_self) identifier_self (identifier_warcserver_server) identifier_warcserver_server )attribute (identifier_port) identifier_port )attribute )argument_list )call )binary_operator (identifier_warc_writer) identifier_warc_writer (keyword_argument (identifier_accept_colls) identifier_accept_colls (call (attribute (identifier_recorder_config) identifier_recorder_config (identifier_get) identifier_get )attribute (argument_list (string_'source_filter') string_'source_filter' )argument_list )call )keyword_argument )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_recorder_server) identifier_recorder_server (call (identifier_GeventServer) identifier_GeventServer (argument_list (attribute (identifier_self) identifier_self (identifier_recorder) identifier_recorder )attribute (keyword_argument (identifier_port) identifier_port (integer_0) integer_0 )keyword_argument )argument_list )call )assignment )expression_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_recorder_path) identifier_recorder_path )attribute (binary_operator (attribute (identifier_self) identifier_self (identifier_RECORD_API) identifier_RECORD_API )attribute (tuple (attribute (identifier_recorder_server) identifier_recorder_server (identifier_port) identifier_port )attribute (identifier_recorder_coll) identifier_recorder_coll )tuple )binary_operator )assignment )expression_statement )block )function_definition )module
Initialize the recording functionality of pywb. If recording_config is None this function is a no op
(module (function_definition (function_name_errorprint) function_name_errorprint (parameters )parameters (block (try_statement (block (expression_statement (yield )yield )expression_statement )block (except_clause (as_pattern (identifier_ConfigurationError) identifier_ConfigurationError (as_pattern_target (identifier_e) identifier_e )as_pattern_target )as_pattern (block (expression_statement (call (attribute (identifier_click) identifier_click (identifier_secho) identifier_secho )attribute (argument_list (binary_operator (string_'%s') string_'%s' (identifier_e) identifier_e )binary_operator (keyword_argument (identifier_err) identifier_err (True) True )keyword_argument (keyword_argument (identifier_fg) identifier_fg (string_'red') string_'red' )keyword_argument )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_sys) identifier_sys (identifier_exit) identifier_exit )attribute (argument_list (integer_1) integer_1 )argument_list )call )expression_statement )block )except_clause )try_statement )block )function_definition )module
Print out descriptions from ConfigurationError.
(module (function_definition (function_name_prior_neighbor) function_name_prior_neighbor (parameters (identifier_C) identifier_C (default_parameter (identifier_alpha) identifier_alpha (float_0.001) float_0.001 )default_parameter )parameters (block (expression_statement (identifier_r) identifier_r )expression_statement (if_statement (call (identifier_isdense) identifier_isdense (argument_list (identifier_C) identifier_C )argument_list )call (block (expression_statement (assignment (identifier_B) identifier_B (call (attribute (attribute (identifier_sparse) identifier_sparse (identifier_prior) identifier_prior )attribute (identifier_prior_neighbor) identifier_prior_neighbor )attribute (argument_list (call (identifier_csr_matrix) identifier_csr_matrix (argument_list (identifier_C) identifier_C )argument_list )call (keyword_argument (identifier_alpha) identifier_alpha (identifier_alpha) identifier_alpha )keyword_argument )argument_list )call )assignment )expression_statement (return_statement (call (attribute (identifier_B) identifier_B (identifier_toarray) identifier_toarray )attribute (argument_list )argument_list )call )return_statement )block (else_clause (block (return_statement (call (attribute (attribute (identifier_sparse) identifier_sparse (identifier_prior) identifier_prior )attribute (identifier_prior_neighbor) identifier_prior_neighbor )attribute (argument_list (identifier_C) identifier_C (keyword_argument (identifier_alpha) identifier_alpha (identifier_alpha) identifier_alpha )keyword_argument )argument_list )call )return_statement )block )else_clause )if_statement )block )function_definition )module
r"""Neighbor prior for the given count matrix. Parameters ---------- C : (M, M) ndarray or scipy.sparse matrix Count matrix alpha : float (optional) Value of prior counts Returns ------- B : (M, M) ndarray or scipy.sparse matrix Prior count matrix Notes ------ The neighbor prior :math:`b_{ij}` is defined as .. math:: b_{ij}=\left \{ \begin{array}{rl} \alpha & c_{ij}+c_{ji}>0 \\ 0 & \text{else} \end{array} \right . Examples -------- >>> import numpy as np >>> from msmtools.estimation import prior_neighbor >>> C = np.array([[10, 1, 0], [2, 0, 3], [0, 1, 4]]) >>> B = prior_neighbor(C) >>> B array([[ 0.001, 0.001, 0. ], [ 0.001, 0. , 0.001], [ 0. , 0.001, 0.001]])
(module (function_definition (function_name__get_decimal_digits) function_name__get_decimal_digits (parameters (identifier_decimal_number_match) identifier_decimal_number_match (identifier_number_of_significant_digits) identifier_number_of_significant_digits )parameters (block (assert_statement (comparison_operator (string_'e') string_'e' (call (attribute (identifier_decimal_number_match) identifier_decimal_number_match (identifier_group) identifier_group )attribute (argument_list )argument_list )call )comparison_operator )assert_statement (try_statement (block (expression_statement (assignment (identifier_num_of_digits) identifier_num_of_digits (call (identifier_int) identifier_int (argument_list (identifier_number_of_significant_digits) identifier_number_of_significant_digits )argument_list )call )assignment )expression_statement )block (except_clause (identifier_TypeError) identifier_TypeError (block (expression_statement (assignment (identifier_num_of_digits) identifier_num_of_digits (identifier_DEFAULT_NUMBER_OF_SIGNIFICANT_DIGITS) identifier_DEFAULT_NUMBER_OF_SIGNIFICANT_DIGITS )assignment )expression_statement )block )except_clause )try_statement (if_statement (not_operator (call (attribute (identifier_decimal_number_match) identifier_decimal_number_match (identifier_group) identifier_group )attribute (argument_list (identifier_GROUP_DEC_PART) identifier_GROUP_DEC_PART )argument_list )call )not_operator (block (return_statement (integer_0) integer_0 )return_statement )block )if_statement (if_statement (boolean_operator (comparison_operator (call (identifier_int) identifier_int (argument_list (call (attribute (identifier_decimal_number_match) identifier_decimal_number_match (identifier_group) identifier_group )attribute (argument_list (identifier_GROUP_INT_PART) identifier_GROUP_INT_PART )argument_list )call )argument_list )call (integer_0) integer_0 )comparison_operator (line_continuation_\) line_continuation_\ (comparison_operator (call (identifier_int) identifier_int (argument_list (subscript (call (attribute (identifier_decimal_number_match) identifier_decimal_number_match (identifier_group) identifier_group )attribute (argument_list (identifier_GROUP_DEC_PART) identifier_GROUP_DEC_PART )argument_list )call (slice (integer_1) integer_1 (colon) colon )slice )subscript )argument_list )call (integer_0) integer_0 )comparison_operator )boolean_operator (block (expression_statement (assignment (identifier_max_num_of_digits) identifier_max_num_of_digits (call (identifier_len) identifier_len (argument_list (call (attribute (identifier_decimal_number_match) identifier_decimal_number_match (identifier_group) identifier_group )attribute (argument_list (identifier_GROUP_SIG_DEC_PART) identifier_GROUP_SIG_DEC_PART )argument_list )call )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_num_of_digits) identifier_num_of_digits (call (identifier_min) identifier_min (argument_list (identifier_num_of_digits) identifier_num_of_digits (identifier_max_num_of_digits) identifier_max_num_of_digits )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_curr_dec_digits) identifier_curr_dec_digits (binary_operator (call (identifier_len) identifier_len (argument_list (call (attribute (identifier_decimal_number_match) identifier_decimal_number_match (identifier_group) identifier_group )attribute (argument_list (identifier_GROUP_ZEROES) identifier_GROUP_ZEROES )argument_list )call )argument_list )call (call (identifier_int) identifier_int (argument_list (identifier_num_of_digits) identifier_num_of_digits )argument_list )call )binary_operator )assignment )expression_statement )block (else_clause (block (expression_statement (assignment (identifier_max_num_of_digits) identifier_max_num_of_digits (line_continuation_\) line_continuation_\ (binary_operator (call (identifier_len) identifier_len (argument_list (call (attribute (identifier_decimal_number_match) identifier_decimal_number_match (identifier_group) identifier_group )attribute (argument_list (identifier_GROUP_INT_PART) identifier_GROUP_INT_PART )argument_list )call )argument_list )call (call (identifier_len) identifier_len (argument_list (call (attribute (identifier_decimal_number_match) identifier_decimal_number_match (identifier_group) identifier_group )attribute (argument_list (identifier_GROUP_DEC_PART) identifier_GROUP_DEC_PART )argument_list )call )argument_list )call )binary_operator )assignment )expression_statement (expression_statement (assignment (identifier_num_of_digits) identifier_num_of_digits (call (identifier_min) identifier_min (argument_list (identifier_num_of_digits) identifier_num_of_digits (identifier_max_num_of_digits) identifier_max_num_of_digits )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_curr_dec_digits) identifier_curr_dec_digits (binary_operator (call (identifier_int) identifier_int (argument_list (identifier_num_of_digits) identifier_num_of_digits )argument_list )call (call (identifier_len) identifier_len (argument_list (call (attribute (identifier_decimal_number_match) identifier_decimal_number_match (identifier_group) identifier_group )attribute (argument_list (identifier_GROUP_INT_PART) identifier_GROUP_INT_PART )argument_list )call )argument_list )call )binary_operator )assignment )expression_statement )block )else_clause )if_statement (return_statement (identifier_curr_dec_digits) identifier_curr_dec_digits )return_statement )block )function_definition )module
Returns the amount of decimal digits of the given regex match, considering the number of significant digits for the provided column. @param decimal_number_match: a regex match of a decimal number, resulting from REGEX_MEASURE.match(x). @param number_of_significant_digits: the number of significant digits required @return: the number of decimal digits of the given decimal number match's representation, after expanding the number to the required amount of significant digits
(module (function_definition (function_name_modSymbolsFromLabelInfo) function_name_modSymbolsFromLabelInfo (parameters (identifier_labelDescriptor) identifier_labelDescriptor )parameters (block (expression_statement (assignment (identifier_modSymbols) identifier_modSymbols (call (identifier_set) identifier_set (argument_list )argument_list )call )assignment )expression_statement (for_statement (identifier_labelStateEntry) identifier_labelStateEntry (call (identifier_viewvalues) identifier_viewvalues (argument_list (attribute (identifier_labelDescriptor) identifier_labelDescriptor (identifier_labels) identifier_labels )attribute )argument_list )call (block (for_statement (identifier_labelPositionEntry) identifier_labelPositionEntry (call (identifier_viewvalues) identifier_viewvalues (argument_list (subscript (identifier_labelStateEntry) identifier_labelStateEntry (string_'aminoAcidLabels') string_'aminoAcidLabels' )subscript )argument_list )call (block (for_statement (identifier_modSymbol) identifier_modSymbol (call (attribute (identifier_aux) identifier_aux (identifier_toList) identifier_toList )attribute (argument_list (identifier_labelPositionEntry) identifier_labelPositionEntry )argument_list )call (block (if_statement (comparison_operator (identifier_modSymbol) identifier_modSymbol (string_'') string_'' )comparison_operator (block (expression_statement (call (attribute (identifier_modSymbols) identifier_modSymbols (identifier_add) identifier_add )attribute (argument_list (identifier_modSymbol) identifier_modSymbol )argument_list )call )expression_statement )block )if_statement )block )for_statement )block )for_statement )block )for_statement (return_statement (identifier_modSymbols) identifier_modSymbols )return_statement )block )function_definition )module
Returns a set of all modiciation symbols which were used in the labelDescriptor :param labelDescriptor: :class:`LabelDescriptor` describes the label setup of an experiment :returns: #TODO: docstring
(module (function_definition (function_name_reparse) function_name_reparse (parameters (identifier_self) identifier_self )parameters (block (expression_statement (call (attribute (identifier_self) identifier_self (identifier__remove_all_children) identifier__remove_all_children )attribute (argument_list )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_self) identifier_self (identifier__parse_context) identifier__parse_context )attribute (argument_list (attribute (identifier_self) identifier_self (identifier__context) identifier__context )attribute (attribute (identifier_self) identifier_self (identifier_orb) identifier_orb )attribute )argument_list )call )expression_statement )block )function_definition )module
Reparse all children of this directory. This effectively rebuilds the tree below this node. This operation takes an unbounded time to complete; if there are a lot of objects registered below this directory's context, they will all need to be parsed.
(module (function_definition (function_name_translate) function_name_translate (parameters (identifier_obj) identifier_obj (identifier_vec) identifier_vec (dictionary_splat_pattern (identifier_kwargs) identifier_kwargs )dictionary_splat_pattern )parameters (block (if_statement (boolean_operator (not_operator (identifier_vec) identifier_vec )not_operator (not_operator (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_vec) identifier_vec (tuple (identifier_tuple) identifier_tuple (identifier_list) identifier_list )tuple )argument_list )call )not_operator )boolean_operator (block (raise_statement (call (identifier_GeomdlException) identifier_GeomdlException (argument_list (string_"The input must be a list or a tuple") string_"The input must be a list or a tuple" )argument_list )call )raise_statement )block )if_statement (if_statement (comparison_operator (call (identifier_len) identifier_len (argument_list (identifier_vec) identifier_vec )argument_list )call (attribute (identifier_obj) identifier_obj (identifier_dimension) identifier_dimension )attribute )comparison_operator (block (raise_statement (call (identifier_GeomdlException) identifier_GeomdlException (argument_list (binary_operator (binary_operator (string_"The input vector must have ") string_"The input vector must have " (call (identifier_str) identifier_str (argument_list (attribute (identifier_obj) identifier_obj (identifier_dimension) identifier_dimension )attribute )argument_list )call )binary_operator (string_" components") string_" components" )binary_operator )argument_list )call )raise_statement )block )if_statement (expression_statement (assignment (identifier_inplace) identifier_inplace (call (attribute (identifier_kwargs) identifier_kwargs (identifier_get) identifier_get )attribute (argument_list (string_'inplace') string_'inplace' (False) False )argument_list )call )assignment )expression_statement (if_statement (not_operator (identifier_inplace) identifier_inplace )not_operator (block (expression_statement (assignment (identifier_geom) identifier_geom (call (attribute (identifier_copy) identifier_copy (identifier_deepcopy) identifier_deepcopy )attribute (argument_list (identifier_obj) identifier_obj )argument_list )call )assignment )expression_statement )block (else_clause (block (expression_statement (assignment (identifier_geom) identifier_geom (identifier_obj) identifier_obj )assignment )expression_statement )block )else_clause )if_statement (for_statement (identifier_g) identifier_g (identifier_geom) identifier_geom (block (expression_statement (assignment (identifier_new_ctrlpts) identifier_new_ctrlpts (list )list )assignment )expression_statement (for_statement (identifier_pt) identifier_pt (attribute (identifier_g) identifier_g (identifier_ctrlpts) identifier_ctrlpts )attribute (block (expression_statement (assignment (identifier_temp) identifier_temp (list_comprehension (binary_operator (identifier_v) identifier_v (subscript (identifier_vec) identifier_vec (identifier_i) identifier_i )subscript )binary_operator (for_in_clause (pattern_list (identifier_i) identifier_i (identifier_v) identifier_v )pattern_list (call (identifier_enumerate) identifier_enumerate (argument_list (identifier_pt) identifier_pt )argument_list )call )for_in_clause )list_comprehension )assignment )expression_statement (expression_statement (call (attribute (identifier_new_ctrlpts) identifier_new_ctrlpts (identifier_append) identifier_append )attribute (argument_list (identifier_temp) identifier_temp )argument_list )call )expression_statement )block )for_statement (expression_statement (assignment (attribute (identifier_g) identifier_g (identifier_ctrlpts) identifier_ctrlpts )attribute (identifier_new_ctrlpts) identifier_new_ctrlpts )assignment )expression_statement )block )for_statement (return_statement (identifier_geom) identifier_geom )return_statement )block )function_definition )module
Translates curves, surface or volumes by the input vector. Keyword Arguments: * ``inplace``: if False, operation applied to a copy of the object. *Default: False* :param obj: input geometry :type obj: abstract.SplineGeometry or multi.AbstractContainer :param vec: translation vector :type vec: list, tuple :return: translated geometry object
(module (function_definition (function_name_lookup_subclass) function_name_lookup_subclass (parameters (identifier_cls) identifier_cls (identifier_d) identifier_d )parameters (block (try_statement (block (expression_statement (assignment (identifier_typeid) identifier_typeid (subscript (identifier_d) identifier_d (string_"typeid") string_"typeid" )subscript )assignment )expression_statement )block (except_clause (identifier_KeyError) identifier_KeyError (block (raise_statement (call (identifier_FieldError) identifier_FieldError (argument_list (binary_operator (string_"typeid not present in keys %s") string_"typeid not present in keys %s" (call (identifier_list) identifier_list (argument_list (identifier_d) identifier_d )argument_list )call )binary_operator )argument_list )call )raise_statement )block )except_clause )try_statement (expression_statement (assignment (identifier_subclass) identifier_subclass (call (attribute (attribute (identifier_cls) identifier_cls (identifier__subcls_lookup) identifier__subcls_lookup )attribute (identifier_get) identifier_get )attribute (argument_list (identifier_typeid) identifier_typeid (None) None )argument_list )call )assignment )expression_statement (if_statement (not_operator (identifier_subclass) identifier_subclass )not_operator (block (raise_statement (call (identifier_FieldError) identifier_FieldError (argument_list (binary_operator (string_"'%s' not a valid typeid") string_"'%s' not a valid typeid" (identifier_typeid) identifier_typeid )binary_operator )argument_list )call )raise_statement )block (else_clause (block (return_statement (identifier_subclass) identifier_subclass )return_statement )block )else_clause )if_statement )block )function_definition )module
Look up a class based on a serialized dictionary containing a typeid Args: d (dict): Dictionary with key "typeid" Returns: Serializable subclass
(module (function_definition (function_name__set_status_self) function_name__set_status_self (parameters (identifier_self) identifier_self (default_parameter (identifier_key) identifier_key (attribute (identifier_JobDetails) identifier_JobDetails (identifier_topkey) identifier_topkey )attribute )default_parameter (default_parameter (identifier_status) identifier_status (attribute (identifier_JobStatus) identifier_JobStatus (identifier_unknown) identifier_unknown )attribute )default_parameter )parameters (block (expression_statement (assignment (identifier_fullkey) identifier_fullkey (call (attribute (identifier_JobDetails) identifier_JobDetails (identifier_make_fullkey) identifier_make_fullkey )attribute (argument_list (attribute (identifier_self) identifier_self (identifier_full_linkname) identifier_full_linkname )attribute (identifier_key) identifier_key )argument_list )call )assignment )expression_statement (if_statement (comparison_operator (identifier_fullkey) identifier_fullkey (attribute (identifier_self) identifier_self (identifier_jobs) identifier_jobs )attribute )comparison_operator (block (expression_statement (assignment (attribute (subscript (attribute (identifier_self) identifier_self (identifier_jobs) identifier_jobs )attribute (identifier_fullkey) identifier_fullkey )subscript (identifier_status) identifier_status )attribute (identifier_status) identifier_status )assignment )expression_statement (if_statement (attribute (identifier_self) identifier_self (identifier__job_archive) identifier__job_archive )attribute (block (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier__job_archive) identifier__job_archive )attribute (identifier_register_job) identifier_register_job )attribute (argument_list (subscript (attribute (identifier_self) identifier_self (identifier_jobs) identifier_jobs )attribute (identifier_fullkey) identifier_fullkey )subscript )argument_list )call )expression_statement )block )if_statement )block (else_clause (block (expression_statement (call (attribute (identifier_self) identifier_self (identifier__register_self) identifier__register_self )attribute (argument_list (string_'dummy.log') string_'dummy.log' (identifier_key) identifier_key (identifier_status) identifier_status )argument_list )call )expression_statement )block )else_clause )if_statement )block )function_definition )module
Set the status of this job, both in self.jobs and in the `JobArchive` if it is present.
(module (function_definition (function_name_add_note) function_name_add_note (parameters (identifier_note) identifier_note (dictionary_splat_pattern (identifier_kwargs) identifier_kwargs )dictionary_splat_pattern )parameters (block (expression_statement (assignment (identifier_note_i) identifier_note_i (call (identifier_Note) identifier_Note (argument_list )argument_list )call )assignment )expression_statement (expression_statement (assignment (attribute (identifier_note_i) identifier_note_i (identifier_ref_key) identifier_ref_key )attribute (attribute (identifier_note) identifier_note (identifier_ref_key) identifier_ref_key )attribute )assignment )expression_statement (expression_statement (call (attribute (identifier_note_i) identifier_note_i (identifier_set_ref) identifier_set_ref )attribute (argument_list (attribute (identifier_note) identifier_note (identifier_ref_key) identifier_ref_key )attribute (attribute (identifier_note) identifier_note (identifier_ref_id) identifier_ref_id )attribute )argument_list )call )expression_statement (expression_statement (assignment (attribute (identifier_note_i) identifier_note_i (identifier_value) identifier_value )attribute (attribute (identifier_note) identifier_note (identifier_value) identifier_value )attribute )assignment )expression_statement (expression_statement (assignment (attribute (identifier_note_i) identifier_note_i (identifier_created_by) identifier_created_by )attribute (call (attribute (identifier_kwargs) identifier_kwargs (identifier_get) identifier_get )attribute (argument_list (string_'user_id') string_'user_id' )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (attribute (identifier_db) identifier_db (identifier_DBSession) identifier_DBSession )attribute (identifier_add) identifier_add )attribute (argument_list (identifier_note_i) identifier_note_i )argument_list )call )expression_statement (expression_statement (call (attribute (attribute (identifier_db) identifier_db (identifier_DBSession) identifier_DBSession )attribute (identifier_flush) identifier_flush )attribute (argument_list )argument_list )call )expression_statement (return_statement (identifier_note_i) identifier_note_i )return_statement )block )function_definition )module
Add a new note
(module (function_definition (function_name_has_property) function_name_has_property (parameters (identifier_obj) identifier_obj (identifier_name) identifier_name )parameters (block (if_statement (boolean_operator (comparison_operator (identifier_obj) identifier_obj (None) None )comparison_operator (comparison_operator (identifier_name) identifier_name (None) None )comparison_operator )boolean_operator (block (return_statement (False) False )return_statement )block )if_statement (expression_statement (assignment (identifier_names) identifier_names (call (attribute (identifier_name) identifier_name (identifier_split) identifier_split )attribute (argument_list (string_".") string_"." )argument_list )call )assignment )expression_statement (if_statement (boolean_operator (comparison_operator (identifier_names) identifier_names (None) None )comparison_operator (comparison_operator (call (identifier_len) identifier_len (argument_list (identifier_names) identifier_names )argument_list )call (integer_0) integer_0 )comparison_operator )boolean_operator (block (return_statement (False) False )return_statement )block )if_statement (return_statement (call (attribute (identifier_RecursiveObjectReader) identifier_RecursiveObjectReader (identifier__perform_has_property) identifier__perform_has_property )attribute (argument_list (identifier_obj) identifier_obj (identifier_names) identifier_names (integer_0) integer_0 )argument_list )call )return_statement )block )function_definition )module
Checks recursively if object or its subobjects has a property with specified name. The object can be a user defined object, map or array. The property name correspondently must be object property, map key or array index. :param obj: an object to introspect. :param name: a name of the property to check. :return: true if the object has the property and false if it doesn't.
(module (function_definition (function_name_get_namespace_and_tag) function_name_get_namespace_and_tag (parameters (identifier_name) identifier_name )parameters (block (if_statement (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_name) identifier_name (identifier_str) identifier_str )argument_list )call (block (if_statement (comparison_operator (subscript (identifier_name) identifier_name (integer_0) integer_0 )subscript (string_"{") string_"{" )comparison_operator (block (expression_statement (assignment (pattern_list (identifier_uri) identifier_uri (identifier_ignore) identifier_ignore (identifier_tag) identifier_tag )pattern_list (call (attribute (subscript (identifier_name) identifier_name (slice (integer_1) integer_1 (colon) colon )slice )subscript (identifier_partition) identifier_partition )attribute (argument_list (string_"}") string_"}" )argument_list )call )assignment )expression_statement )block (else_clause (block (expression_statement (assignment (identifier_uri) identifier_uri (None) None )assignment )expression_statement (expression_statement (assignment (identifier_tag) identifier_tag (identifier_name) identifier_name )assignment )expression_statement )block )else_clause )if_statement )block (else_clause (block (expression_statement (assignment (identifier_uri) identifier_uri (None) None )assignment )expression_statement (expression_statement (assignment (identifier_tag) identifier_tag (None) None )assignment )expression_statement )block )else_clause )if_statement (return_statement (expression_list (identifier_uri) identifier_uri (identifier_tag) identifier_tag )expression_list )return_statement )block )function_definition )module
Separates the namespace and tag from an element. :param str name: Tag. :returns: Namespace URI and Tag namespace. :rtype: tuple
(module (function_definition (function_name_get_credits_by_section_and_regid) function_name_get_credits_by_section_and_regid (parameters (identifier_section) identifier_section (identifier_regid) identifier_regid )parameters (block (expression_statement (call (identifier_deprecation) identifier_deprecation (argument_list (string_"Use get_credits_by_reg_url") string_"Use get_credits_by_reg_url" )argument_list )call )expression_statement (expression_statement (assignment (identifier_url) identifier_url (call (attribute (string_"{}{},{},{},{},{},{},.json") string_"{}{},{},{},{},{},{},.json" (identifier_format) identifier_format )attribute (argument_list (identifier_reg_credits_url_prefix) identifier_reg_credits_url_prefix (attribute (attribute (identifier_section) identifier_section (identifier_term) identifier_term )attribute (identifier_year) identifier_year )attribute (attribute (attribute (identifier_section) identifier_section (identifier_term) identifier_term )attribute (identifier_quarter) identifier_quarter )attribute (call (attribute (identifier_re) identifier_re (identifier_sub) identifier_sub )attribute (argument_list (string_' ') string_' ' (string_'%20') string_'%20' (attribute (identifier_section) identifier_section (identifier_curriculum_abbr) identifier_curriculum_abbr )attribute )argument_list )call (attribute (identifier_section) identifier_section (identifier_course_number) identifier_course_number )attribute (attribute (identifier_section) identifier_section (identifier_section_id) identifier_section_id )attribute (identifier_regid) identifier_regid )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_reg_data) identifier_reg_data (call (identifier_get_resource) identifier_get_resource (argument_list (identifier_url) identifier_url )argument_list )call )assignment )expression_statement (try_statement (block (return_statement (call (identifier_Decimal) identifier_Decimal (argument_list (call (attribute (subscript (identifier_reg_data) identifier_reg_data (string_'Credits') string_'Credits' )subscript (identifier_strip) identifier_strip )attribute (argument_list )argument_list )call )argument_list )call )return_statement )block (except_clause (identifier_InvalidOperation) identifier_InvalidOperation (block (pass_statement )pass_statement )block )except_clause )try_statement )block )function_definition )module
Returns a uw_sws.models.Registration object for the section and regid passed in.
(module (function_definition (function_name_destroyManager) function_name_destroyManager (parameters (identifier_self) identifier_self (default_parameter (identifier_force) identifier_force (False) False )default_parameter )parameters (block (if_statement (comparison_operator (call (attribute (identifier_self) identifier_self (identifier_getManager) identifier_getManager )attribute (argument_list (keyword_argument (identifier_force) identifier_force (identifier_force) identifier_force )keyword_argument )argument_list )call (None) None )comparison_operator (block (expression_statement (assignment (identifier_key) identifier_key (call (attribute (identifier_self) identifier_self (identifier_getSessionKey) identifier_getSessionKey )attribute (argument_list )argument_list )call )assignment )expression_statement (delete_statement (subscript (attribute (identifier_self) identifier_self (identifier_session) identifier_session )attribute (identifier_key) identifier_key )subscript )delete_statement )block )if_statement )block )function_definition )module
Delete any YadisServiceManager with this starting URL and suffix from the session. If there is no service manager or the service manager is for a different URL, it silently does nothing. @param force: True if the manager should be deleted regardless of whether it's a manager for self.url.
(module (function_definition (function_name_thin_samples_for_writing) function_name_thin_samples_for_writing (parameters (identifier_fp) identifier_fp (identifier_samples) identifier_samples (identifier_parameters) identifier_parameters (identifier_last_iteration) identifier_last_iteration )parameters (block (if_statement (comparison_operator (attribute (identifier_fp) identifier_fp (identifier_thinned_by) identifier_thinned_by )attribute (integer_1) integer_1 )comparison_operator (block (if_statement (comparison_operator (identifier_last_iteration) identifier_last_iteration (None) None )comparison_operator (block (raise_statement (call (identifier_ValueError) identifier_ValueError (argument_list (call (attribute (concatenated_string (string_"File's thinned_by attribute is > 1 ({}), ") string_"File's thinned_by attribute is > 1 ({}), " (string_"but last_iteration not provided.") string_"but last_iteration not provided." )concatenated_string (identifier_format) identifier_format )attribute (argument_list (attribute (identifier_fp) identifier_fp (identifier_thinned_by) identifier_thinned_by )attribute )argument_list )call )argument_list )call )raise_statement )block )if_statement (expression_statement (assignment (identifier_thinned_samples) identifier_thinned_samples (dictionary )dictionary )assignment )expression_statement (for_statement (identifier_param) identifier_param (identifier_parameters) identifier_parameters (block (expression_statement (assignment (identifier_data) identifier_data (subscript (identifier_samples) identifier_samples (identifier_param) identifier_param )subscript )assignment )expression_statement (expression_statement (assignment (identifier_nsamples) identifier_nsamples (subscript (attribute (identifier_data) identifier_data (identifier_shape) identifier_shape )attribute (unary_operator (integer_1) integer_1 )unary_operator )subscript )assignment )expression_statement (expression_statement (assignment (identifier_thin_start) identifier_thin_start (binary_operator (binary_operator (binary_operator (call (attribute (identifier_fp) identifier_fp (identifier_last_iteration) identifier_last_iteration )attribute (argument_list (identifier_param) identifier_param )argument_list )call (attribute (identifier_fp) identifier_fp (identifier_thinned_by) identifier_thinned_by )attribute )binary_operator (line_continuation_\) line_continuation_\ (parenthesized_expression (binary_operator (identifier_last_iteration) identifier_last_iteration (identifier_nsamples) identifier_nsamples )binary_operator )parenthesized_expression )binary_operator (integer_1) integer_1 )binary_operator )assignment )expression_statement (expression_statement (assignment (subscript (identifier_thinned_samples) identifier_thinned_samples (identifier_param) identifier_param )subscript (subscript (identifier_data) identifier_data (ellipsis_...) ellipsis_... (slice (identifier_thin_start) identifier_thin_start (colon) colon (colon) colon (attribute (identifier_fp) identifier_fp (identifier_thinned_by) identifier_thinned_by )attribute )slice )subscript )assignment )expression_statement )block )for_statement )block (else_clause (block (expression_statement (assignment (identifier_thinned_samples) identifier_thinned_samples (identifier_samples) identifier_samples )assignment )expression_statement )block )else_clause )if_statement (return_statement (identifier_thinned_samples) identifier_thinned_samples )return_statement )block )function_definition )module
Thins samples for writing to disk. The thinning interval to use is determined by the given file handler's ``thinned_by`` attribute. If that attribute is 1, just returns the samples. Parameters ---------- fp : MCMCMetadataIO instance The file the sampels will be written to. Needed to determine the thin interval used on disk. samples : dict Dictionary mapping parameter names to arrays of (unthinned) samples. The arrays are thinned along their last dimension. parameters : list of str The parameters to thin in ``samples`` before writing. All listed parameters must be in ``samples``. last_iteration : int The iteration that the last sample in ``samples`` occurred at. This is needed to figure out where to start the thinning in ``samples``, such that the interval between the last sample on disk and the first new sample is the same as all of the other samples. Returns ------- dict : Dictionary of the thinned samples to write.
(module (function_definition (function_name__parse_shape) function_name__parse_shape (parameters (identifier_self) identifier_self (identifier_space) identifier_space )parameters (block (if_statement (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_space) identifier_space (attribute (attribute (identifier_gym) identifier_gym (identifier_spaces) identifier_spaces )attribute (identifier_Discrete) identifier_Discrete )attribute )argument_list )call (block (return_statement (tuple )tuple )return_statement )block )if_statement (if_statement (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_space) identifier_space (attribute (attribute (identifier_gym) identifier_gym (identifier_spaces) identifier_spaces )attribute (identifier_Box) identifier_Box )attribute )argument_list )call (block (return_statement (attribute (identifier_space) identifier_space (identifier_shape) identifier_shape )attribute )return_statement )block )if_statement (raise_statement (call (identifier_NotImplementedError) identifier_NotImplementedError (argument_list )argument_list )call )raise_statement )block )function_definition )module
Get a tensor shape from a OpenAI Gym space. Args: space: Gym space. Raises: NotImplementedError: For spaces other than Box and Discrete. Returns: Shape tuple.
(module (function_definition (function_name_cublasSgbmv) function_name_cublasSgbmv (parameters (identifier_handle) identifier_handle (identifier_trans) identifier_trans (identifier_m) identifier_m (identifier_n) identifier_n (identifier_kl) identifier_kl (identifier_ku) identifier_ku (identifier_alpha) identifier_alpha (identifier_A) identifier_A (identifier_lda) identifier_lda (identifier_x) identifier_x (identifier_incx) identifier_incx (identifier_beta) identifier_beta (identifier_y) identifier_y (identifier_incy) identifier_incy )parameters (block (expression_statement (assignment (identifier_status) identifier_status (call (attribute (identifier__libcublas) identifier__libcublas (identifier_cublasSgbmv_v2) identifier_cublasSgbmv_v2 )attribute (argument_list (identifier_handle) identifier_handle (identifier_trans) identifier_trans (identifier_m) identifier_m (identifier_n) identifier_n (identifier_kl) identifier_kl (identifier_ku) identifier_ku (call (attribute (identifier_ctypes) identifier_ctypes (identifier_byref) identifier_byref )attribute (argument_list (call (attribute (identifier_ctypes) identifier_ctypes (identifier_c_float) identifier_c_float )attribute (argument_list (identifier_alpha) identifier_alpha )argument_list )call )argument_list )call (call (identifier_int) identifier_int (argument_list (identifier_A) identifier_A )argument_list )call (identifier_lda) identifier_lda (call (identifier_int) identifier_int (argument_list (identifier_x) identifier_x )argument_list )call (identifier_incx) identifier_incx (call (attribute (identifier_ctypes) identifier_ctypes (identifier_byref) identifier_byref )attribute (argument_list (call (attribute (identifier_ctypes) identifier_ctypes (identifier_c_float) identifier_c_float )attribute (argument_list (identifier_beta) identifier_beta )argument_list )call )argument_list )call (call (identifier_int) identifier_int (argument_list (identifier_y) identifier_y )argument_list )call (identifier_incy) identifier_incy )argument_list )call )assignment )expression_statement (expression_statement (call (identifier_cublasCheckStatus) identifier_cublasCheckStatus (argument_list (identifier_status) identifier_status )argument_list )call )expression_statement )block )function_definition )module
Matrix-vector product for real general banded matrix.
(module (function_definition (function_name_setup) function_name_setup (parameters (identifier_self) identifier_self (default_parameter (identifier_redis_conn) identifier_redis_conn (None) None )default_parameter (default_parameter (identifier_host) identifier_host (string_'localhost') string_'localhost' )default_parameter (default_parameter (identifier_port) identifier_port (integer_6379) integer_6379 )default_parameter )parameters (block (if_statement (comparison_operator (identifier_redis_conn) identifier_redis_conn (None) None )comparison_operator (block (if_statement (boolean_operator (comparison_operator (identifier_host) identifier_host (None) None )comparison_operator (comparison_operator (identifier_port) identifier_port (None) None )comparison_operator )boolean_operator (block (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_redis_conn) identifier_redis_conn )attribute (call (attribute (identifier_redis) identifier_redis (identifier_Redis) identifier_Redis )attribute (argument_list (keyword_argument (identifier_host) identifier_host (identifier_host) identifier_host )keyword_argument (keyword_argument (identifier_port) identifier_port (identifier_port) identifier_port )keyword_argument )argument_list )call )assignment )expression_statement )block (else_clause (block (raise_statement (call (identifier_Exception) identifier_Exception (argument_list (concatenated_string (string_"Please specify some form of connection ") string_"Please specify some form of connection " (string_"to Redis") string_"to Redis" )concatenated_string )argument_list )call )raise_statement )block )else_clause )if_statement )block (else_clause (block (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_redis_conn) identifier_redis_conn )attribute (identifier_redis_conn) identifier_redis_conn )assignment )expression_statement )block )else_clause )if_statement (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_redis_conn) identifier_redis_conn )attribute (identifier_info) identifier_info )attribute (argument_list )argument_list )call )expression_statement )block )function_definition )module
Set up the redis connection
(module (function_definition (function_name_fromfilenames) function_name_fromfilenames (parameters (identifier_cls) identifier_cls (identifier_filenames) identifier_filenames (default_parameter (identifier_coltype) identifier_coltype (identifier_LIGOTimeGPS) identifier_LIGOTimeGPS )default_parameter )parameters (block (expression_statement (assignment (identifier_cache) identifier_cache (call (identifier_cls) identifier_cls (argument_list )argument_list )call )assignment )expression_statement (for_statement (identifier_filename) identifier_filename (identifier_filenames) identifier_filenames (block (expression_statement (call (attribute (identifier_cache) identifier_cache (identifier_extend) identifier_extend )attribute (argument_list (call (attribute (identifier_cls) identifier_cls (identifier_fromfile) identifier_fromfile )attribute (argument_list (call (identifier_open) identifier_open (argument_list (identifier_filename) identifier_filename )argument_list )call (keyword_argument (identifier_coltype) identifier_coltype (identifier_coltype) identifier_coltype )keyword_argument )argument_list )call )argument_list )call )expression_statement )block )for_statement (return_statement (identifier_cache) identifier_cache )return_statement )block )function_definition )module
Read Cache objects from the files named and concatenate the results into a single Cache.
(module (function_definition (function_name__get_dvportgroup_dict) function_name__get_dvportgroup_dict (parameters (identifier_pg_ref) identifier_pg_ref )parameters (block (expression_statement (assignment (identifier_props) identifier_props (call (attribute (attribute (attribute (identifier_salt) identifier_salt (identifier_utils) identifier_utils )attribute (identifier_vmware) identifier_vmware )attribute (identifier_get_properties_of_managed_object) identifier_get_properties_of_managed_object )attribute (argument_list (identifier_pg_ref) identifier_pg_ref (list (string_'name') string_'name' (string_'config.description') string_'config.description' (string_'config.numPorts') string_'config.numPorts' (string_'config.type') string_'config.type' (string_'config.defaultPortConfig') string_'config.defaultPortConfig' )list )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_pg_dict) identifier_pg_dict (dictionary (pair (string_'name') string_'name' (subscript (identifier_props) identifier_props (string_'name') string_'name' )subscript )pair (pair (string_'description') string_'description' (call (attribute (identifier_props) identifier_props (identifier_get) identifier_get )attribute (argument_list (string_'config.description') string_'config.description' )argument_list )call )pair (pair (string_'num_ports') string_'num_ports' (subscript (identifier_props) identifier_props (string_'config.numPorts') string_'config.numPorts' )subscript )pair (pair (string_'type') string_'type' (subscript (identifier_props) identifier_props (string_'config.type') string_'config.type' )subscript )pair )dictionary )assignment )expression_statement (if_statement (subscript (identifier_props) identifier_props (string_'config.defaultPortConfig') string_'config.defaultPortConfig' )subscript (block (expression_statement (assignment (identifier_dpg) identifier_dpg (subscript (identifier_props) identifier_props (string_'config.defaultPortConfig') string_'config.defaultPortConfig' )subscript )assignment )expression_statement (if_statement (boolean_operator (attribute (identifier_dpg) identifier_dpg (identifier_vlan) identifier_vlan )attribute (line_continuation_\) line_continuation_\ (call (identifier_isinstance) identifier_isinstance (argument_list (attribute (identifier_dpg) identifier_dpg (identifier_vlan) identifier_vlan )attribute (attribute (identifier_vim) identifier_vim (identifier_VmwareDistributedVirtualSwitchVlanIdSpec) identifier_VmwareDistributedVirtualSwitchVlanIdSpec )attribute )argument_list )call )boolean_operator (block (expression_statement (call (attribute (identifier_pg_dict) identifier_pg_dict (identifier_update) identifier_update )attribute (argument_list (dictionary (pair (string_'vlan_id') string_'vlan_id' (attribute (attribute (identifier_dpg) identifier_dpg (identifier_vlan) identifier_vlan )attribute (identifier_vlanId) identifier_vlanId )attribute )pair )dictionary )argument_list )call )expression_statement )block )if_statement (expression_statement (call (attribute (identifier_pg_dict) identifier_pg_dict (identifier_update) identifier_update )attribute (argument_list (dictionary (pair (string_'out_shaping') string_'out_shaping' (call (identifier__get_dvportgroup_out_shaping) identifier__get_dvportgroup_out_shaping (argument_list (subscript (identifier_props) identifier_props (string_'name') string_'name' )subscript (subscript (identifier_props) identifier_props (string_'config.defaultPortConfig') string_'config.defaultPortConfig' )subscript )argument_list )call )pair )dictionary )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_pg_dict) identifier_pg_dict (identifier_update) identifier_update )attribute (argument_list (dictionary (pair (string_'security_policy') string_'security_policy' (call (identifier__get_dvportgroup_security_policy) identifier__get_dvportgroup_security_policy (argument_list (subscript (identifier_props) identifier_props (string_'name') string_'name' )subscript (subscript (identifier_props) identifier_props (string_'config.defaultPortConfig') string_'config.defaultPortConfig' )subscript )argument_list )call )pair )dictionary )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_pg_dict) identifier_pg_dict (identifier_update) identifier_update )attribute (argument_list (dictionary (pair (string_'teaming') string_'teaming' (call (identifier__get_dvportgroup_teaming) identifier__get_dvportgroup_teaming (argument_list (subscript (identifier_props) identifier_props (string_'name') string_'name' )subscript (subscript (identifier_props) identifier_props (string_'config.defaultPortConfig') string_'config.defaultPortConfig' )subscript )argument_list )call )pair )dictionary )argument_list )call )expression_statement )block )if_statement (return_statement (identifier_pg_dict) identifier_pg_dict )return_statement )block )function_definition )module
Returns a dictionary with a distributed virutal portgroup data pg_ref Portgroup reference
(module (function_definition (function_name_show_customer) function_name_show_customer (parameters (identifier_self) identifier_self (identifier_customer_id) identifier_customer_id )parameters (block (expression_statement (assignment (identifier_request) identifier_request (call (attribute (identifier_self) identifier_self (identifier__get) identifier__get )attribute (argument_list (binary_operator (string_'customers/') string_'customers/' (call (identifier_str) identifier_str (argument_list (identifier_customer_id) identifier_customer_id )argument_list )call )binary_operator )argument_list )call )assignment )expression_statement (return_statement (call (attribute (identifier_self) identifier_self (identifier_responder) identifier_responder )attribute (argument_list (identifier_request) identifier_request )argument_list )call )return_statement )block )function_definition )module
Shows an existing customer.
(module (function_definition (function_name__build_layout) function_name__build_layout (parameters (identifier_self) identifier_self )parameters (block (expression_statement (string_" Rebuild a new Container object and return that. ") string_" Rebuild a new Container object and return that. " )expression_statement (expression_statement (call (attribute (identifier_logger) identifier_logger (identifier_info) identifier_info )attribute (argument_list (string_'Rebuilding layout.') string_'Rebuilding layout.' )argument_list )call )expression_statement (if_statement (not_operator (attribute (attribute (attribute (identifier_self) identifier_self (identifier_pymux) identifier_pymux )attribute (identifier_arrangement) identifier_arrangement )attribute (identifier_windows) identifier_windows )attribute )not_operator (block (return_statement (call (identifier_Window) identifier_Window (argument_list )argument_list )call )return_statement )block )if_statement (expression_statement (assignment (identifier_active_window) identifier_active_window (call (attribute (attribute (attribute (identifier_self) identifier_self (identifier_pymux) identifier_pymux )attribute (identifier_arrangement) identifier_arrangement )attribute (identifier_get_active_window) identifier_get_active_window )attribute (argument_list )argument_list )call )assignment )expression_statement (if_statement (attribute (identifier_active_window) identifier_active_window (identifier_zoom) identifier_zoom )attribute (block (return_statement (call (identifier_to_container) identifier_to_container (argument_list (call (identifier__create_container_for_process) identifier__create_container_for_process (argument_list (attribute (identifier_self) identifier_self (identifier_pymux) identifier_pymux )attribute (identifier_active_window) identifier_active_window (attribute (identifier_active_window) identifier_active_window (identifier_active_pane) identifier_active_pane )attribute (keyword_argument (identifier_zoom) identifier_zoom (True) True )keyword_argument )argument_list )call )argument_list )call )return_statement )block (else_clause (block (expression_statement (assignment (identifier_window) identifier_window (call (attribute (attribute (attribute (identifier_self) identifier_self (identifier_pymux) identifier_pymux )attribute (identifier_arrangement) identifier_arrangement )attribute (identifier_get_active_window) identifier_get_active_window )attribute (argument_list )argument_list )call )assignment )expression_statement (return_statement (call (identifier_HSplit) identifier_HSplit (argument_list (list (call (identifier_ConditionalContainer) identifier_ConditionalContainer (argument_list (keyword_argument (identifier_content) identifier_content (call (identifier_Window) identifier_Window (argument_list (keyword_argument (identifier_height) identifier_height (integer_1) integer_1 )keyword_argument )argument_list )call )keyword_argument (keyword_argument (identifier_filter) identifier_filter (call (identifier_Condition) identifier_Condition (argument_list (lambda (attribute (attribute (identifier_self) identifier_self (identifier_pymux) identifier_pymux )attribute (identifier_enable_pane_status) identifier_enable_pane_status )attribute )lambda )argument_list )call )keyword_argument )argument_list )call (call (identifier__create_split) identifier__create_split (argument_list (attribute (identifier_self) identifier_self (identifier_pymux) identifier_pymux )attribute (identifier_window) identifier_window (attribute (identifier_window) identifier_window (identifier_root) identifier_root )attribute )argument_list )call )list )argument_list )call )return_statement )block )else_clause )if_statement )block )function_definition )module
Rebuild a new Container object and return that.
(module (function_definition (function_name_to_cli_filter) function_name_to_cli_filter (parameters (identifier_bool_or_filter) identifier_bool_or_filter )parameters (block (if_statement (not_operator (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_bool_or_filter) identifier_bool_or_filter (tuple (identifier_bool) identifier_bool (identifier_CLIFilter) identifier_CLIFilter )tuple )argument_list )call )not_operator (block (raise_statement (call (identifier_TypeError) identifier_TypeError (argument_list (binary_operator (string_'Expecting a bool or a CLIFilter instance. Got %r') string_'Expecting a bool or a CLIFilter instance. Got %r' (identifier_bool_or_filter) identifier_bool_or_filter )binary_operator )argument_list )call )raise_statement )block )if_statement (return_statement (call (attribute (dictionary (pair (True) True (identifier__always) identifier__always )pair (pair (False) False (identifier__never) identifier__never )pair )dictionary (identifier_get) identifier_get )attribute (argument_list (identifier_bool_or_filter) identifier_bool_or_filter (identifier_bool_or_filter) identifier_bool_or_filter )argument_list )call )return_statement )block )function_definition )module
Accept both booleans and CLIFilters as input and turn it into a CLIFilter.
(module (function_definition (function_name_equals) function_name_equals (parameters (identifier_df1) identifier_df1 (identifier_df2) identifier_df2 (default_parameter (identifier_ignore_order) identifier_ignore_order (call (identifier_set) identifier_set (argument_list )argument_list )call )default_parameter (default_parameter (identifier_ignore_indices) identifier_ignore_indices (call (identifier_set) identifier_set (argument_list )argument_list )call )default_parameter (default_parameter (identifier_all_close) identifier_all_close (False) False )default_parameter (default_parameter (identifier__return_reason) identifier__return_reason (False) False )default_parameter )parameters (block (expression_statement (assignment (identifier_result) identifier_result (call (identifier__equals) identifier__equals (argument_list (identifier_df1) identifier_df1 (identifier_df2) identifier_df2 (identifier_ignore_order) identifier_ignore_order (identifier_ignore_indices) identifier_ignore_indices (identifier_all_close) identifier_all_close )argument_list )call )assignment )expression_statement (if_statement (identifier__return_reason) identifier__return_reason (block (return_statement (identifier_result) identifier_result )return_statement )block (else_clause (block (return_statement (subscript (identifier_result) identifier_result (integer_0) integer_0 )subscript )return_statement )block )else_clause )if_statement )block )function_definition )module
Get whether 2 data frames are equal. ``NaN`` is considered equal to ``NaN`` and `None`. Parameters ---------- df1 : ~pandas.DataFrame Data frame to compare. df2 : ~pandas.DataFrame Data frame to compare. ignore_order : ~typing.Set[int] Axi in which to ignore order. ignore_indices : ~typing.Set[int] Axi of which to ignore the index. E.g. ``{1}`` allows differences in ``df.columns.name`` and ``df.columns.equals(df2.columns)``. all_close : bool If `False`, values must match exactly, if `True`, floats are compared as if compared with `numpy.isclose`. _return_reason : bool Internal. If `True`, `equals` returns a tuple containing the reason, else `equals` only returns a bool indicating equality (or equivalence rather). Returns ------- bool Whether they are equal (after ignoring according to the parameters). Internal note: if ``_return_reason``, ``Tuple[bool, str or None]`` is returned. The former is whether they're equal, the latter is `None` if equal or a short explanation of why the data frames aren't equal, otherwise. Notes ----- All values (including those of indices) must be copyable and ``__eq__`` must be such that a copy must equal its original. A value must equal itself unless it's ``NaN``. Values needn't be orderable or hashable (however pandas requires index values to be orderable and hashable). By consequence, this is not an efficient function, but it is flexible. Examples -------- >>> from pytil import data_frame as df_ >>> import pandas as pd >>> df = pd.DataFrame([ ... [1, 2, 3], ... [4, 5, 6], ... [7, 8, 9] ... ], ... index=pd.Index(('i1', 'i2', 'i3'), name='index1'), ... columns=pd.Index(('c1', 'c2', 'c3'), name='columns1') ... ) >>> df columns1 c1 c2 c3 index1 i1 1 2 3 i2 4 5 6 i3 7 8 9 >>> df2 = df.reindex(('i3', 'i1', 'i2'), columns=('c2', 'c1', 'c3')) >>> df2 columns1 c2 c1 c3 index1 i3 8 7 9 i1 2 1 3 i2 5 4 6 >>> df_.equals(df, df2) False >>> df_.equals(df, df2, ignore_order=(0,1)) True >>> df2 = df.copy() >>> df2.index = [1,2,3] >>> df2 columns1 c1 c2 c3 1 1 2 3 2 4 5 6 3 7 8 9 >>> df_.equals(df, df2) False >>> df_.equals(df, df2, ignore_indices={0}) True >>> df2 = df.reindex(('i3', 'i1', 'i2')) >>> df2 columns1 c1 c2 c3 index1 i3 7 8 9 i1 1 2 3 i2 4 5 6 >>> df_.equals(df, df2, ignore_indices={0}) # does not ignore row order! False >>> df_.equals(df, df2, ignore_order={0}) True >>> df2 = df.copy() >>> df2.index.name = 'other' >>> df_.equals(df, df2) # df.index.name must match as well, same goes for df.columns.name False
(module (function_definition (function_name_parse) function_name_parse (parameters (identifier_timestring) identifier_timestring )parameters (block (for_statement (identifier_parser) identifier_parser (identifier__PARSERS) identifier__PARSERS (block (expression_statement (assignment (identifier_match) identifier_match (call (attribute (subscript (identifier_parser) identifier_parser (string_'pattern') string_'pattern' )subscript (identifier_match) identifier_match )attribute (argument_list (identifier_timestring) identifier_timestring )argument_list )call )assignment )expression_statement (if_statement (identifier_match) identifier_match (block (expression_statement (assignment (identifier_groups) identifier_groups (call (attribute (identifier_match) identifier_match (identifier_groups) identifier_groups )attribute (argument_list )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_ints) identifier_ints (call (identifier_tuple) identifier_tuple (argument_list (call (identifier_map) identifier_map (argument_list (identifier_int) identifier_int (identifier_groups) identifier_groups )argument_list )call )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_time) identifier_time (call (subscript (identifier_parser) identifier_parser (string_'factory') string_'factory' )subscript (argument_list (identifier_ints) identifier_ints )argument_list )call )assignment )expression_statement (return_statement (identifier_time) identifier_time )return_statement )block )if_statement )block )for_statement (raise_statement (call (identifier_TimeError) identifier_TimeError (argument_list (call (attribute (string_'Unsupported time format {}') string_'Unsupported time format {}' (identifier_format) identifier_format )attribute (argument_list (identifier_timestring) identifier_timestring )argument_list )call )argument_list )call )raise_statement )block )function_definition )module
Convert a statbank time string to a python datetime object.
(module (function_definition (function_name_app0) function_name_app0 (parameters (identifier_self) identifier_self )parameters (block (for_statement (identifier_m) identifier_m (attribute (identifier_self) identifier_self (identifier__markers) identifier__markers )attribute (block (if_statement (comparison_operator (attribute (identifier_m) identifier_m (identifier_marker_code) identifier_marker_code )attribute (attribute (identifier_JPEG_MARKER_CODE) identifier_JPEG_MARKER_CODE (identifier_APP0) identifier_APP0 )attribute )comparison_operator (block (return_statement (identifier_m) identifier_m )return_statement )block )if_statement )block )for_statement (raise_statement (call (identifier_KeyError) identifier_KeyError (argument_list (string_'no APP0 marker in image') string_'no APP0 marker in image' )argument_list )call )raise_statement )block )function_definition )module
First APP0 marker in image markers.
(module (function_definition (function_name_purge_old_user_tasks) function_name_purge_old_user_tasks (parameters )parameters (block (expression_statement (assignment (identifier_limit) identifier_limit (binary_operator (call (identifier_now) identifier_now (argument_list )argument_list )call (attribute (identifier_settings) identifier_settings (identifier_USER_TASKS_MAX_AGE) identifier_USER_TASKS_MAX_AGE )attribute )binary_operator )assignment )expression_statement (expression_statement (call (attribute (call (attribute (attribute (identifier_UserTaskStatus) identifier_UserTaskStatus (identifier_objects) identifier_objects )attribute (identifier_filter) identifier_filter )attribute (argument_list (keyword_argument (identifier_created__lt) identifier_created__lt (identifier_limit) identifier_limit )keyword_argument )argument_list )call (identifier_delete) identifier_delete )attribute (argument_list )argument_list )call )expression_statement )block )function_definition )module
Delete any UserTaskStatus and UserTaskArtifact records older than ``settings.USER_TASKS_MAX_AGE``. Intended to be run as a scheduled task.