sequence
stringlengths
557
12.7k
docstring
stringlengths
4
15.2k
(module (function_definition (function_name__check_environ) function_name__check_environ (parameters (identifier_variable) identifier_variable (identifier_value) identifier_value )parameters (block (if_statement (call (identifier_is_not_none) identifier_is_not_none (argument_list (identifier_value) identifier_value )argument_list )call (block (return_statement (identifier_value) identifier_value )return_statement )block (else_clause (block (expression_statement (assignment (identifier_value) identifier_value (call (attribute (attribute (identifier_os) identifier_os (identifier_environ) identifier_environ )attribute (identifier_get) identifier_get )attribute (argument_list (identifier_variable) identifier_variable )argument_list )call )assignment )expression_statement (if_statement (call (identifier_is_none) identifier_is_none (argument_list (identifier_value) identifier_value )argument_list )call (block (expression_statement (call (identifier_stop) identifier_stop (argument_list (call (attribute (string_'') string_'' (identifier_join) identifier_join )attribute (argument_list (list (identifier_variable) identifier_variable )list )argument_list )call )argument_list )call )expression_statement )block (else_clause (block (return_statement (identifier_value) identifier_value )return_statement )block )else_clause )if_statement )block )else_clause )if_statement )block )function_definition )module
check if a variable is present in the environmental variables
(module (function_definition (function_name_reset) function_name_reset (parameters (identifier_self) identifier_self )parameters (block (if_statement (comparison_operator (attribute (identifier_self) identifier_self (identifier_state) identifier_state )attribute (attribute (identifier_TimerState) identifier_TimerState (identifier_stopped) identifier_stopped )attribute )comparison_operator (block (if_statement (boolean_operator (attribute (identifier_self) identifier_self (identifier_on_reset) identifier_on_reset )attribute (comparison_operator (attribute (identifier_self) identifier_self (identifier_state) identifier_state )attribute (attribute (identifier_TimerState) identifier_TimerState (identifier_overflow) identifier_overflow )attribute )comparison_operator )boolean_operator (block (if_statement (call (identifier_callable) identifier_callable (argument_list (attribute (identifier_self) identifier_self (identifier_on_reset) identifier_on_reset )attribute )argument_list )call (block (expression_statement (call (attribute (identifier_self) identifier_self (identifier_on_reset) identifier_on_reset )attribute (argument_list )argument_list )call )expression_statement )block (else_clause (block (expression_statement (call (identifier_execute) identifier_execute (argument_list (attribute (identifier_self) identifier_self (identifier_on_reset) identifier_on_reset )attribute )argument_list )call )expression_statement )block )else_clause )if_statement )block )if_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_state) identifier_state )attribute (attribute (identifier_TimerState) identifier_TimerState (identifier_stopped) identifier_stopped )attribute )assignment )expression_statement )block )if_statement )block )function_definition )module
Stop timer and execute ``on_reset`` if overflow occured.
(module (function_definition (function_name_set_snapshots) function_name_set_snapshots (parameters (identifier_self) identifier_self (identifier_snapshots) identifier_snapshots )parameters (block (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_snapshots) identifier_snapshots )attribute (call (attribute (identifier_pd) identifier_pd (identifier_Index) identifier_Index )attribute (argument_list (identifier_snapshots) identifier_snapshots )argument_list )call )assignment )expression_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_snapshot_weightings) identifier_snapshot_weightings )attribute (call (attribute (attribute (identifier_self) identifier_self (identifier_snapshot_weightings) identifier_snapshot_weightings )attribute (identifier_reindex) identifier_reindex )attribute (argument_list (attribute (identifier_self) identifier_self (identifier_snapshots) identifier_snapshots )attribute (keyword_argument (identifier_fill_value) identifier_fill_value (float_1.) float_1. )keyword_argument )argument_list )call )assignment )expression_statement (if_statement (boolean_operator (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_snapshots) identifier_snapshots (attribute (identifier_pd) identifier_pd (identifier_DatetimeIndex) identifier_DatetimeIndex )attribute )argument_list )call (comparison_operator (identifier__pd_version) identifier__pd_version (string_'0.18.0') string_'0.18.0' )comparison_operator )boolean_operator (block (expression_statement (assignment (identifier_snapshots) identifier_snapshots (call (attribute (identifier_pd) identifier_pd (identifier_Index) identifier_Index )attribute (argument_list (attribute (identifier_snapshots) identifier_snapshots (identifier_values) identifier_values )attribute )argument_list )call )assignment )expression_statement )block )if_statement (for_statement (identifier_component) identifier_component (attribute (identifier_self) identifier_self (identifier_all_components) identifier_all_components )attribute (block (expression_statement (assignment (identifier_pnl) identifier_pnl (call (attribute (identifier_self) identifier_self (identifier_pnl) identifier_pnl )attribute (argument_list (identifier_component) identifier_component )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_attrs) identifier_attrs (subscript (subscript (attribute (identifier_self) identifier_self (identifier_components) identifier_components )attribute (identifier_component) identifier_component )subscript (string_"attrs") string_"attrs" )subscript )assignment )expression_statement (for_statement (pattern_list (identifier_k) identifier_k (identifier_default) identifier_default )pattern_list (call (attribute (subscript (attribute (identifier_attrs) identifier_attrs (identifier_default) identifier_default )attribute (attribute (identifier_attrs) identifier_attrs (identifier_varying) identifier_varying )attribute )subscript (identifier_iteritems) identifier_iteritems )attribute (argument_list )argument_list )call (block (expression_statement (assignment (subscript (identifier_pnl) identifier_pnl (identifier_k) identifier_k )subscript (call (attribute (call (attribute (subscript (identifier_pnl) identifier_pnl (identifier_k) identifier_k )subscript (identifier_reindex) identifier_reindex )attribute (argument_list (attribute (identifier_self) identifier_self (identifier_snapshots) identifier_snapshots )attribute )argument_list )call (identifier_fillna) identifier_fillna )attribute (argument_list (identifier_default) identifier_default )argument_list )call )assignment )expression_statement )block )for_statement )block )for_statement )block )function_definition )module
Set the snapshots and reindex all time-dependent data. This will reindex all pandas.Panels of time-dependent data; NaNs are filled with the default value for that quantity. Parameters ---------- snapshots : list or pandas.Index All time steps. Returns ------- None
(module (function_definition (function_name_to_description_dict) function_name_to_description_dict (parameters (identifier_self) identifier_self )parameters (block (return_statement (dictionary (pair (string_'certificateArn') string_'certificateArn' (attribute (identifier_self) identifier_self (identifier_arn) identifier_arn )attribute )pair (pair (string_'certificateId') string_'certificateId' (attribute (identifier_self) identifier_self (identifier_certificate_id) identifier_certificate_id )attribute )pair (pair (string_'status') string_'status' (attribute (identifier_self) identifier_self (identifier_status) identifier_status )attribute )pair (pair (string_'certificatePem') string_'certificatePem' (attribute (identifier_self) identifier_self (identifier_certificate_pem) identifier_certificate_pem )attribute )pair (pair (string_'ownedBy') string_'ownedBy' (attribute (identifier_self) identifier_self (identifier_owner) identifier_owner )attribute )pair (pair (string_'creationDate') string_'creationDate' (attribute (identifier_self) identifier_self (identifier_creation_date) identifier_creation_date )attribute )pair (pair (string_'lastModifiedDate') string_'lastModifiedDate' (attribute (identifier_self) identifier_self (identifier_last_modified_date) identifier_last_modified_date )attribute )pair (pair (string_'transferData') string_'transferData' (attribute (identifier_self) identifier_self (identifier_transfer_data) identifier_transfer_data )attribute )pair )dictionary )return_statement )block )function_definition )module
You might need keys below in some situation - caCertificateId - previousOwnedBy
(module (function_definition (function_name_runlist_list) function_name_runlist_list (parameters (dictionary_splat_pattern (identifier_kwargs) identifier_kwargs )dictionary_splat_pattern )parameters (block (expression_statement (assignment (identifier_ctx) identifier_ctx (call (identifier_Context) identifier_Context (argument_list (dictionary_splat (identifier_kwargs) identifier_kwargs )dictionary_splat )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (identifier_ctx) identifier_ctx (identifier_execute_action) identifier_execute_action )attribute (argument_list (string_'runlist:list') string_'runlist:list' (dictionary_splat (dictionary (pair (string_'storage') string_'storage' (call (attribute (attribute (identifier_ctx) identifier_ctx (identifier_repo) identifier_repo )attribute (identifier_create_secure_service) identifier_create_secure_service )attribute (argument_list (string_'storage') string_'storage' )argument_list )call )pair )dictionary )dictionary_splat )argument_list )call )expression_statement )block )function_definition )module
Show uploaded runlists.
(module (function_definition (function_name_stop_instance) function_name_stop_instance (parameters (identifier_self) identifier_self (identifier_instance) identifier_instance )parameters (block (expression_statement (assignment (identifier_params) identifier_params (dictionary (pair (string_'state') string_'state' (string_'stopped') string_'stopped' )pair )dictionary )assignment )expression_statement (expression_statement (assignment (identifier_url) identifier_url (call (attribute (string_'/instances/{}') string_'/instances/{}' (identifier_format) identifier_format )attribute (argument_list (identifier_instance) identifier_instance )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (identifier_self) identifier_self (identifier_patch_proto) identifier_patch_proto )attribute (argument_list (identifier_url) identifier_url (keyword_argument (identifier_params) identifier_params (identifier_params) identifier_params )keyword_argument )argument_list )call )expression_statement )block )function_definition )module
Stops a single instance. :param str instance: A Yamcs instance name.
(module (function_definition (function_name_copy_scubadir_file) function_name_copy_scubadir_file (parameters (identifier_self) identifier_self (identifier_name) identifier_name (identifier_source) identifier_source )parameters (block (expression_statement (assignment (identifier_dest) identifier_dest (call (attribute (attribute (identifier_os) identifier_os (identifier_path) identifier_path )attribute (identifier_join) identifier_join )attribute (argument_list (attribute (identifier_self) identifier_self (identifier___scubadir_hostpath) identifier___scubadir_hostpath )attribute (identifier_name) identifier_name )argument_list )call )assignment )expression_statement (assert_statement (not_operator (call (attribute (attribute (identifier_os) identifier_os (identifier_path) identifier_path )attribute (identifier_exists) identifier_exists )attribute (argument_list (identifier_dest) identifier_dest )argument_list )call )not_operator )assert_statement (expression_statement (call (attribute (identifier_shutil) identifier_shutil (identifier_copy2) identifier_copy2 )attribute (argument_list (identifier_source) identifier_source (identifier_dest) identifier_dest )argument_list )call )expression_statement (return_statement (call (attribute (attribute (identifier_os) identifier_os (identifier_path) identifier_path )attribute (identifier_join) identifier_join )attribute (argument_list (attribute (identifier_self) identifier_self (identifier___scubadir_contpath) identifier___scubadir_contpath )attribute (identifier_name) identifier_name )argument_list )call )return_statement )block )function_definition )module
Copies source into the scubadir Returns the container-path of the copied file
(module (function_definition (function_name_setWindowSize) function_name_setWindowSize (parameters (identifier_self) identifier_self (identifier_winsz) identifier_winsz )parameters (block (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_tracePlot) identifier_tracePlot )attribute (identifier_setWindowSize) identifier_setWindowSize )attribute (argument_list (identifier_winsz) identifier_winsz )argument_list )call )expression_statement (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_stimPlot) identifier_stimPlot )attribute (identifier_setWindowSize) identifier_setWindowSize )attribute (argument_list (identifier_winsz) identifier_winsz )argument_list )call )expression_statement )block )function_definition )module
Sets the size of scroll window
(module (function_definition (function_name_sort_url_qsl) function_name_sort_url_qsl (parameters (identifier_cls) identifier_cls (identifier_raw_url) identifier_raw_url (dictionary_splat_pattern (identifier_kwargs) identifier_kwargs )dictionary_splat_pattern )parameters (block (expression_statement (assignment (identifier_parsed_url) identifier_parsed_url (call (identifier_urlparse) identifier_urlparse (argument_list (identifier_raw_url) identifier_raw_url )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_qsl) identifier_qsl (call (identifier_parse_qsl) identifier_parse_qsl (argument_list (attribute (identifier_parsed_url) identifier_parsed_url (identifier_query) identifier_query )attribute )argument_list )call )assignment )expression_statement (return_statement (call (attribute (identifier_cls) identifier_cls (identifier__join_url) identifier__join_url )attribute (argument_list (identifier_parsed_url) identifier_parsed_url (call (identifier_sorted) identifier_sorted (argument_list (identifier_qsl) identifier_qsl (dictionary_splat (identifier_kwargs) identifier_kwargs )dictionary_splat )argument_list )call )argument_list )call )return_statement )block )function_definition )module
Do nothing but sort the params of url. raw_url: the raw url to be sorted; kwargs: (optional) same kwargs for ``sorted``.
(module (function_definition (function_name_query_all_collisions) function_name_query_all_collisions (parameters (identifier_collision_object) identifier_collision_object )parameters (block (global_statement (identifier_collidable_objects) identifier_collidable_objects )global_statement (expression_statement (assignment (identifier_colliding) identifier_colliding (list )list )assignment )expression_statement (for_statement (identifier_obj) identifier_obj (identifier_collidable_objects) identifier_collidable_objects (block (if_statement (comparison_operator (identifier_obj) identifier_obj (identifier_collision_object) identifier_collision_object )comparison_operator (block (if_statement (call (attribute (identifier_collision_object) identifier_collision_object (identifier_is_colliding) identifier_is_colliding )attribute (argument_list (identifier_obj) identifier_obj )argument_list )call (block (expression_statement (call (attribute (identifier_colliding) identifier_colliding (identifier_append) identifier_append )attribute (argument_list (identifier_obj) identifier_obj )argument_list )call )expression_statement )block )if_statement )block )if_statement )block )for_statement (return_statement (identifier_colliding) identifier_colliding )return_statement )block )function_definition )module
Check for and return the full list of objects colliding with collision_object
(module (function_definition (function_name__attach_to_instance) function_name__attach_to_instance (parameters (identifier_self) identifier_self (identifier_instance) identifier_instance )parameters (block (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier__instance) identifier__instance )attribute (identifier_instance) identifier_instance )assignment )expression_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_lockable) identifier_lockable )attribute (boolean_operator (attribute (identifier_self) identifier_self (identifier_lockable) identifier_lockable )attribute (attribute (identifier_instance) identifier_instance (identifier_lockable) identifier_lockable )attribute )boolean_operator )assignment )expression_statement )block )function_definition )module
Attach the current field to an instance of a model. Can be overriden to do something when an instance is set
(module (function_definition (function_name_do_sqlite_connect) function_name_do_sqlite_connect (parameters (identifier_dbapi_connection) identifier_dbapi_connection (identifier_connection_record) identifier_connection_record )parameters (block (expression_statement (assignment (identifier_cursor) identifier_cursor (call (attribute (identifier_dbapi_connection) identifier_dbapi_connection (identifier_cursor) identifier_cursor )attribute (argument_list )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (identifier_cursor) identifier_cursor (identifier_execute) identifier_execute )attribute (argument_list (string_'PRAGMA foreign_keys=ON') string_'PRAGMA foreign_keys=ON' )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_cursor) identifier_cursor (identifier_close) identifier_close )attribute (argument_list )argument_list )call )expression_statement )block )function_definition )module
Ensure SQLite checks foreign key constraints. For further details see "Foreign key support" sections on https://docs.sqlalchemy.org/en/latest/dialects/sqlite.html#foreign-key-support
(module (function_definition (function_name_get_tag_value) function_name_get_tag_value (parameters (identifier_self) identifier_self (identifier_i) identifier_i )parameters (block (expression_statement (assignment (identifier_found) identifier_found (False) False )assignment )expression_statement (for_statement (identifier_t) identifier_t (call (attribute (identifier_i) identifier_i (identifier_get) identifier_get )attribute (argument_list (string_'Tags') string_'Tags' (tuple )tuple )argument_list )call (block (if_statement (comparison_operator (call (attribute (subscript (identifier_t) identifier_t (string_'Key') string_'Key' )subscript (identifier_lower) identifier_lower )attribute (argument_list )argument_list )call (attribute (identifier_self) identifier_self (identifier_tag_key) identifier_tag_key )attribute )comparison_operator (block (expression_statement (assignment (identifier_found) identifier_found (subscript (identifier_t) identifier_t (string_'Value') string_'Value' )subscript )assignment )expression_statement (break_statement )break_statement )block )if_statement )block )for_statement (if_statement (comparison_operator (identifier_found) identifier_found (False) False )comparison_operator (block (return_statement (False) False )return_statement )block )if_statement (expression_statement (assignment (identifier_value) identifier_value (call (attribute (call (attribute (call (attribute (identifier_found) identifier_found (identifier_lower) identifier_lower )attribute (argument_list )argument_list )call (identifier_encode) identifier_encode )attribute (argument_list (string_'utf8') string_'utf8' )argument_list )call (identifier_decode) identifier_decode )attribute (argument_list (string_'utf8') string_'utf8' )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_value) identifier_value (call (attribute (call (attribute (identifier_value) identifier_value (identifier_strip) identifier_strip )attribute (argument_list (string_"'") string_"'" )argument_list )call (identifier_strip) identifier_strip )attribute (argument_list (string_'"') string_'"' )argument_list )call )assignment )expression_statement (return_statement (identifier_value) identifier_value )return_statement )block )function_definition )module
Get the resource's tag value specifying its schedule.
(module (function_definition (function_name_on_pause) function_name_on_pause (parameters (identifier_self) identifier_self )parameters (block (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_engine) identifier_engine )attribute (identifier_commit) identifier_commit )attribute (argument_list )argument_list )call )expression_statement (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_strings) identifier_strings )attribute (identifier_save) identifier_save )attribute (argument_list )argument_list )call )expression_statement (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_funcs) identifier_funcs )attribute (identifier_save) identifier_save )attribute (argument_list )argument_list )call )expression_statement (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_config) identifier_config )attribute (identifier_write) identifier_write )attribute (argument_list )argument_list )call )expression_statement )block )function_definition )module
Sync the database with the current state of the game.
(module (function_definition (function_name__get_encoding) function_name__get_encoding (parameters (identifier_encoding_or_label) identifier_encoding_or_label )parameters (block (if_statement (call (identifier_hasattr) identifier_hasattr (argument_list (identifier_encoding_or_label) identifier_encoding_or_label (string_'codec_info') string_'codec_info' )argument_list )call (block (return_statement (identifier_encoding_or_label) identifier_encoding_or_label )return_statement )block )if_statement (expression_statement (assignment (identifier_encoding) identifier_encoding (call (identifier_lookup) identifier_lookup (argument_list (identifier_encoding_or_label) identifier_encoding_or_label )argument_list )call )assignment )expression_statement (if_statement (comparison_operator (identifier_encoding) identifier_encoding (None) None )comparison_operator (block (raise_statement (call (identifier_LookupError) identifier_LookupError (argument_list (binary_operator (string_'Unknown encoding label: %r') string_'Unknown encoding label: %r' (identifier_encoding_or_label) identifier_encoding_or_label )binary_operator )argument_list )call )raise_statement )block )if_statement (return_statement (identifier_encoding) identifier_encoding )return_statement )block )function_definition )module
Accept either an encoding object or label. :param encoding: An :class:`Encoding` object or a label string. :returns: An :class:`Encoding` object. :raises: :exc:`~exceptions.LookupError` for an unknown label.
(module (function_definition (function_name_get_random) function_name_get_random (parameters (identifier_self) identifier_self (identifier_n) identifier_n (default_parameter (identifier_l) identifier_l (None) None )default_parameter )parameters (block (expression_statement (assignment (identifier_random_f) identifier_random_f (call (identifier_Fasta) identifier_Fasta (argument_list )argument_list )call )assignment )expression_statement (if_statement (identifier_l) identifier_l (block (expression_statement (assignment (identifier_ids) identifier_ids (subscript (attribute (identifier_self) identifier_self (identifier_ids) identifier_ids )attribute (slice (colon) colon )slice )subscript )assignment )expression_statement (expression_statement (call (attribute (identifier_random) identifier_random (identifier_shuffle) identifier_shuffle )attribute (argument_list (identifier_ids) identifier_ids )argument_list )call )expression_statement (expression_statement (assignment (identifier_i) identifier_i (integer_0) integer_0 )assignment )expression_statement (while_statement (boolean_operator (parenthesized_expression (comparison_operator (identifier_i) identifier_i (identifier_n) identifier_n )comparison_operator )parenthesized_expression (parenthesized_expression (comparison_operator (call (identifier_len) identifier_len (argument_list (identifier_ids) identifier_ids )argument_list )call (integer_0) integer_0 )comparison_operator )parenthesized_expression )boolean_operator (block (expression_statement (assignment (identifier_seq_id) identifier_seq_id (call (attribute (identifier_ids) identifier_ids (identifier_pop) identifier_pop )attribute (argument_list )argument_list )call )assignment )expression_statement (if_statement (parenthesized_expression (comparison_operator (call (identifier_len) identifier_len (argument_list (subscript (identifier_self) identifier_self (identifier_seq_id) identifier_seq_id )subscript )argument_list )call (identifier_l) identifier_l )comparison_operator )parenthesized_expression (block (expression_statement (assignment (identifier_start) identifier_start (call (attribute (identifier_random) identifier_random (identifier_randint) identifier_randint )attribute (argument_list (integer_0) integer_0 (binary_operator (call (identifier_len) identifier_len (argument_list (subscript (identifier_self) identifier_self (identifier_seq_id) identifier_seq_id )subscript )argument_list )call (identifier_l) identifier_l )binary_operator )argument_list )call )assignment )expression_statement (expression_statement (assignment (subscript (identifier_random_f) identifier_random_f (binary_operator (string_"random%s") string_"random%s" (parenthesized_expression (binary_operator (identifier_i) identifier_i (integer_1) integer_1 )binary_operator )parenthesized_expression )binary_operator )subscript (subscript (subscript (identifier_self) identifier_self (identifier_seq_id) identifier_seq_id )subscript (slice (identifier_start) identifier_start (colon) colon (binary_operator (identifier_start) identifier_start (identifier_l) identifier_l )binary_operator )slice )subscript )assignment )expression_statement (expression_statement (augmented_assignment (identifier_i) identifier_i (integer_1) integer_1 )augmented_assignment )expression_statement )block )if_statement )block )while_statement (if_statement (comparison_operator (call (identifier_len) identifier_len (argument_list (identifier_random_f) identifier_random_f )argument_list )call (identifier_n) identifier_n )comparison_operator (block (expression_statement (call (attribute (attribute (identifier_sys) identifier_sys (identifier_stderr) identifier_stderr )attribute (identifier_write) identifier_write )attribute (argument_list (string_"Not enough sequences of required length") string_"Not enough sequences of required length" )argument_list )call )expression_statement (return_statement )return_statement )block (else_clause (block (return_statement (identifier_random_f) identifier_random_f )return_statement )block )else_clause )if_statement )block (else_clause (block (expression_statement (assignment (identifier_choice) identifier_choice (call (attribute (identifier_random) identifier_random (identifier_sample) identifier_sample )attribute (argument_list (attribute (identifier_self) identifier_self (identifier_ids) identifier_ids )attribute (identifier_n) identifier_n )argument_list )call )assignment )expression_statement (for_statement (identifier_i) identifier_i (call (identifier_range) identifier_range (argument_list (identifier_n) identifier_n )argument_list )call (block (expression_statement (assignment (subscript (identifier_random_f) identifier_random_f (subscript (identifier_choice) identifier_choice (identifier_i) identifier_i )subscript )subscript (subscript (identifier_self) identifier_self (subscript (identifier_choice) identifier_choice (identifier_i) identifier_i )subscript )subscript )assignment )expression_statement )block )for_statement )block )else_clause )if_statement (return_statement (identifier_random_f) identifier_random_f )return_statement )block )function_definition )module
Return n random sequences from this Fasta object
(module (function_definition (function_name_delete_metadata) function_name_delete_metadata (parameters (identifier_self) identifier_self (identifier_container) identifier_container (default_parameter (identifier_prefix) identifier_prefix (None) None )default_parameter )parameters (block (if_statement (comparison_operator (identifier_prefix) identifier_prefix (None) None )comparison_operator (block (expression_statement (assignment (identifier_prefix) identifier_prefix (identifier_CONTAINER_META_PREFIX) identifier_CONTAINER_META_PREFIX )assignment )expression_statement )block )if_statement (expression_statement (assignment (identifier_new_meta) identifier_new_meta (dictionary )dictionary )assignment )expression_statement (expression_statement (assignment (identifier_curr_meta) identifier_curr_meta (call (attribute (identifier_self) identifier_self (identifier_get_metadata) identifier_get_metadata )attribute (argument_list (identifier_container) identifier_container (keyword_argument (identifier_prefix) identifier_prefix (identifier_prefix) identifier_prefix )keyword_argument )argument_list )call )assignment )expression_statement (for_statement (identifier_ckey) identifier_ckey (identifier_curr_meta) identifier_curr_meta (block (expression_statement (assignment (subscript (identifier_new_meta) identifier_new_meta (identifier_ckey) identifier_ckey )subscript (string_"") string_"" )assignment )expression_statement )block )for_statement (expression_statement (assignment (identifier_uri) identifier_uri (binary_operator (string_"/%s") string_"/%s" (call (attribute (identifier_utils) identifier_utils (identifier_get_name) identifier_get_name )attribute (argument_list (identifier_container) identifier_container )argument_list )call )binary_operator )assignment )expression_statement (expression_statement (assignment (pattern_list (identifier_resp) identifier_resp (identifier_resp_body) identifier_resp_body )pattern_list (call (attribute (attribute (identifier_self) identifier_self (identifier_api) identifier_api )attribute (identifier_method_post) identifier_method_post )attribute (argument_list (identifier_uri) identifier_uri (keyword_argument (identifier_headers) identifier_headers (identifier_new_meta) identifier_new_meta )keyword_argument )argument_list )call )assignment )expression_statement (return_statement (comparison_operator (integer_200) integer_200 (attribute (identifier_resp) identifier_resp (identifier_status_code) identifier_status_code )attribute (integer_299) integer_299 )comparison_operator )return_statement )block )function_definition )module
Removes all of the container's metadata. By default, all metadata beginning with the standard container metadata prefix ('X-Container-Meta-') is removed. If you wish to remove all metadata beginning with a different prefix, you must specify that prefix.
(module (function_definition (function_name_shrink) function_name_shrink (parameters (identifier_self) identifier_self (default_parameter (identifier_fraction) identifier_fraction (float_0.85) float_0.85 )default_parameter )parameters (block (expression_statement (assignment (identifier_poly) identifier_poly (call (attribute (identifier_self) identifier_self (identifier_polydata) identifier_polydata )attribute (argument_list (True) True )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_shrink) identifier_shrink (call (attribute (identifier_vtk) identifier_vtk (identifier_vtkShrinkPolyData) identifier_vtkShrinkPolyData )attribute (argument_list )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (identifier_shrink) identifier_shrink (identifier_SetInputData) identifier_SetInputData )attribute (argument_list (identifier_poly) identifier_poly )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_shrink) identifier_shrink (identifier_SetShrinkFactor) identifier_SetShrinkFactor )attribute (argument_list (identifier_fraction) identifier_fraction )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_shrink) identifier_shrink (identifier_Update) identifier_Update )attribute (argument_list )argument_list )call )expression_statement (return_statement (call (attribute (identifier_self) identifier_self (identifier_updateMesh) identifier_updateMesh )attribute (argument_list (call (attribute (identifier_shrink) identifier_shrink (identifier_GetOutput) identifier_GetOutput )attribute (argument_list )argument_list )call )argument_list )call )return_statement )block )function_definition )module
Shrink the triangle polydata in the representation of the input mesh. Example: .. code-block:: python from vtkplotter import * pot = load(datadir + 'shapes/teapot.vtk').shrink(0.75) s = Sphere(r=0.2).pos(0,0,-0.5) show(pot, s) |shrink| |shrink.py|_
(module (function_definition (function_name_plot_bbox) function_name_plot_bbox (parameters (identifier_sf) identifier_sf (identifier_bbox) identifier_bbox (default_parameter (identifier_inside_only) identifier_inside_only (True) True )default_parameter )parameters (block (expression_statement (assignment (pattern_list (identifier_index) identifier_index (identifier_shape_records) identifier_shape_records )pattern_list (call (identifier_bbox_match) identifier_bbox_match (argument_list (identifier_sf) identifier_sf (identifier_bbox) identifier_bbox (identifier_inside_only) identifier_inside_only )argument_list )call )assignment )expression_statement (expression_statement (assignment (pattern_list (identifier_A) identifier_A (identifier_B) identifier_B (identifier_C) identifier_C (identifier_D) identifier_D )pattern_list (identifier_bbox) identifier_bbox )assignment )expression_statement (expression_statement (call (identifier_plot) identifier_plot (argument_list (identifier_shape_records) identifier_shape_records (keyword_argument (identifier_xlims) identifier_xlims (list (subscript (identifier_bbox) identifier_bbox (integer_0) integer_0 )subscript (subscript (identifier_bbox) identifier_bbox (integer_2) integer_2 )subscript )list )keyword_argument (keyword_argument (identifier_ylims) identifier_ylims (list (subscript (identifier_bbox) identifier_bbox (integer_1) integer_1 )subscript (subscript (identifier_bbox) identifier_bbox (integer_3) integer_3 )subscript )list )keyword_argument )argument_list )call )expression_statement )block )function_definition )module
Plot the geometry of a shapefile within a bbox :param sf: shapefile :type sf: shapefile object :param bbox: bounding box :type bbox: list of floats [x_min,y_min,x_max,y_max] :inside_only: True if the objects returned are those that lie within the bbox and False if the objects returned are any that intersect the bbox :type inside_only: Boolean
(module (function_definition (function_name_Set) function_name_Set (parameters (identifier_self) identifier_self (identifier_value) identifier_value (default_parameter (identifier_fields) identifier_fields (None) None )default_parameter )parameters (block (expression_statement (assignment (subscript (attribute (identifier_self) identifier_self (identifier__metric_values) identifier__metric_values )attribute (call (identifier__FieldsToKey) identifier__FieldsToKey (argument_list (identifier_fields) identifier_fields )argument_list )call )subscript (call (attribute (identifier_self) identifier_self (identifier__value_type) identifier__value_type )attribute (argument_list (identifier_value) identifier_value )argument_list )call )assignment )expression_statement )block )function_definition )module
Sets the metric's current value.
(module (function_definition (function_name_get_profane_words) function_name_get_profane_words (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_profane_words) identifier_profane_words (list )list )assignment )expression_statement (if_statement (attribute (identifier_self) identifier_self (identifier__custom_censor_list) identifier__custom_censor_list )attribute (block (expression_statement (assignment (identifier_profane_words) identifier_profane_words (list_comprehension (identifier_w) identifier_w (for_in_clause (identifier_w) identifier_w (attribute (identifier_self) identifier_self (identifier__custom_censor_list) identifier__custom_censor_list )attribute )for_in_clause )list_comprehension )assignment )expression_statement )block (else_clause (block (expression_statement (assignment (identifier_profane_words) identifier_profane_words (list_comprehension (identifier_w) identifier_w (for_in_clause (identifier_w) identifier_w (attribute (identifier_self) identifier_self (identifier__censor_list) identifier__censor_list )attribute )for_in_clause )list_comprehension )assignment )expression_statement )block )else_clause )if_statement (expression_statement (call (attribute (identifier_profane_words) identifier_profane_words (identifier_extend) identifier_extend )attribute (argument_list (attribute (identifier_self) identifier_self (identifier__extra_censor_list) identifier__extra_censor_list )attribute )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_profane_words) identifier_profane_words (identifier_extend) identifier_extend )attribute (argument_list (list_comprehension (call (attribute (identifier_inflection) identifier_inflection (identifier_pluralize) identifier_pluralize )attribute (argument_list (identifier_word) identifier_word )argument_list )call (for_in_clause (identifier_word) identifier_word (identifier_profane_words) identifier_profane_words )for_in_clause )list_comprehension )argument_list )call )expression_statement (expression_statement (assignment (identifier_profane_words) identifier_profane_words (call (identifier_list) identifier_list (argument_list (call (identifier_set) identifier_set (argument_list (identifier_profane_words) identifier_profane_words )argument_list )call )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (identifier_profane_words) identifier_profane_words (identifier_sort) identifier_sort )attribute (argument_list (keyword_argument (identifier_key) identifier_key (identifier_len) identifier_len )keyword_argument )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_profane_words) identifier_profane_words (identifier_reverse) identifier_reverse )attribute (argument_list )argument_list )call )expression_statement (return_statement (identifier_profane_words) identifier_profane_words )return_statement )block )function_definition )module
Returns all profane words currently in use.
(module (function_definition (function_name__parallel_predict) function_name__parallel_predict (parameters (identifier_estimators) identifier_estimators (identifier_estimators_features) identifier_estimators_features (identifier_X) identifier_X (identifier_n_classes) identifier_n_classes (identifier_combination) identifier_combination (identifier_estimators_weight) identifier_estimators_weight )parameters (block (expression_statement (assignment (identifier_n_samples) identifier_n_samples (subscript (attribute (identifier_X) identifier_X (identifier_shape) identifier_shape )attribute (integer_0) integer_0 )subscript )assignment )expression_statement (expression_statement (assignment (identifier_pred) identifier_pred (call (attribute (identifier_np) identifier_np (identifier_zeros) identifier_zeros )attribute (argument_list (tuple (identifier_n_samples) identifier_n_samples (identifier_n_classes) identifier_n_classes )tuple )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_n_estimators) identifier_n_estimators (call (identifier_len) identifier_len (argument_list (identifier_estimators) identifier_estimators )argument_list )call )assignment )expression_statement (for_statement (pattern_list (identifier_estimator) identifier_estimator (identifier_features) identifier_features (identifier_weight) identifier_weight )pattern_list (call (identifier_zip) identifier_zip (argument_list (identifier_estimators) identifier_estimators (identifier_estimators_features) identifier_estimators_features (identifier_estimators_weight) identifier_estimators_weight )argument_list )call (block (expression_statement (assignment (identifier_predictions) identifier_predictions (call (attribute (identifier_estimator) identifier_estimator (identifier_predict) identifier_predict )attribute (argument_list (subscript (identifier_X) identifier_X (slice (colon) colon )slice (identifier_features) identifier_features )subscript )argument_list )call )assignment )expression_statement (for_statement (identifier_i) identifier_i (call (identifier_range) identifier_range (argument_list (identifier_n_samples) identifier_n_samples )argument_list )call (block (if_statement (comparison_operator (identifier_combination) identifier_combination (string_'weighted_voting') string_'weighted_voting' )comparison_operator (block (expression_statement (augmented_assignment (subscript (identifier_pred) identifier_pred (identifier_i) identifier_i (call (identifier_int) identifier_int (argument_list (subscript (identifier_predictions) identifier_predictions (identifier_i) identifier_i )subscript )argument_list )call )subscript (binary_operator (integer_1) integer_1 (identifier_weight) identifier_weight )binary_operator )augmented_assignment )expression_statement )block (else_clause (block (expression_statement (augmented_assignment (subscript (identifier_pred) identifier_pred (identifier_i) identifier_i (call (identifier_int) identifier_int (argument_list (subscript (identifier_predictions) identifier_predictions (identifier_i) identifier_i )subscript )argument_list )call )subscript (integer_1) integer_1 )augmented_assignment )expression_statement )block )else_clause )if_statement )block )for_statement )block )for_statement (return_statement (identifier_pred) identifier_pred )return_statement )block )function_definition )module
Private function used to compute predictions within a job.
(module (function_definition (function_name_view_graph) function_name_view_graph (parameters (identifier_graph_str) identifier_graph_str (default_parameter (identifier_parent) identifier_parent (None) None )default_parameter (default_parameter (identifier_prune_to) identifier_prune_to (None) None )default_parameter )parameters (block (import_from_statement (dotted_name (identifier_rezgui) identifier_rezgui (identifier_dialogs) identifier_dialogs (identifier_ImageViewerDialog) identifier_ImageViewerDialog )dotted_name (dotted_name (identifier_ImageViewerDialog) identifier_ImageViewerDialog )dotted_name )import_from_statement (import_from_statement (dotted_name (identifier_rez) identifier_rez (identifier_config) identifier_config )dotted_name (dotted_name (identifier_config) identifier_config )dotted_name )import_from_statement (expression_statement (assignment (identifier_h) identifier_h (call (identifier_hash) identifier_hash (argument_list (tuple (identifier_graph_str) identifier_graph_str (identifier_prune_to) identifier_prune_to )tuple )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_filepath) identifier_filepath (call (attribute (identifier_graph_file_lookup) identifier_graph_file_lookup (identifier_get) identifier_get )attribute (argument_list (identifier_h) identifier_h )argument_list )call )assignment )expression_statement (if_statement (boolean_operator (identifier_filepath) identifier_filepath (not_operator (call (attribute (attribute (identifier_os) identifier_os (identifier_path) identifier_path )attribute (identifier_exists) identifier_exists )attribute (argument_list (identifier_filepath) identifier_filepath )argument_list )call )not_operator )boolean_operator (block (expression_statement (assignment (identifier_filepath) identifier_filepath (None) None )assignment )expression_statement )block )if_statement (if_statement (comparison_operator (identifier_filepath) identifier_filepath (None) None )comparison_operator (block (expression_statement (assignment (identifier_suffix) identifier_suffix (binary_operator (string_".%s") string_".%s" (attribute (identifier_config) identifier_config (identifier_dot_image_format) identifier_dot_image_format )attribute )binary_operator )assignment )expression_statement (expression_statement (assignment (pattern_list (identifier_fd) identifier_fd (identifier_filepath) identifier_filepath )pattern_list (call (attribute (identifier_tempfile) identifier_tempfile (identifier_mkstemp) identifier_mkstemp )attribute (argument_list (keyword_argument (identifier_suffix) identifier_suffix (identifier_suffix) identifier_suffix )keyword_argument (keyword_argument (identifier_prefix) identifier_prefix (string_"rez-graph-") string_"rez-graph-" )keyword_argument )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (identifier_os) identifier_os (identifier_close) identifier_close )attribute (argument_list (identifier_fd) identifier_fd )argument_list )call )expression_statement (expression_statement (assignment (identifier_dlg) identifier_dlg (call (identifier_WriteGraphDialog) identifier_WriteGraphDialog (argument_list (identifier_graph_str) identifier_graph_str (identifier_filepath) identifier_filepath (identifier_parent) identifier_parent (keyword_argument (identifier_prune_to) identifier_prune_to (identifier_prune_to) identifier_prune_to )keyword_argument )argument_list )call )assignment )expression_statement (if_statement (not_operator (call (attribute (identifier_dlg) identifier_dlg (identifier_write_graph) identifier_write_graph )attribute (argument_list )argument_list )call )not_operator (block (return_statement )return_statement )block )if_statement )block )if_statement (expression_statement (assignment (subscript (identifier_graph_file_lookup) identifier_graph_file_lookup (identifier_h) identifier_h )subscript (identifier_filepath) identifier_filepath )assignment )expression_statement (expression_statement (assignment (identifier_dlg) identifier_dlg (call (identifier_ImageViewerDialog) identifier_ImageViewerDialog (argument_list (identifier_filepath) identifier_filepath (identifier_parent) identifier_parent )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (identifier_dlg) identifier_dlg (identifier_exec_) identifier_exec_ )attribute (argument_list )argument_list )call )expression_statement )block )function_definition )module
View a graph.
(module (function_definition (function_name_num_model_per_iteration) function_name_num_model_per_iteration (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_model_per_iter) identifier_model_per_iter (call (attribute (identifier_ctypes) identifier_ctypes (identifier_c_int) identifier_c_int )attribute (argument_list (integer_0) integer_0 )argument_list )call )assignment )expression_statement (expression_statement (call (identifier__safe_call) identifier__safe_call (argument_list (call (attribute (identifier__LIB) identifier__LIB (identifier_LGBM_BoosterNumModelPerIteration) identifier_LGBM_BoosterNumModelPerIteration )attribute (argument_list (attribute (identifier_self) identifier_self (identifier_handle) identifier_handle )attribute (call (attribute (identifier_ctypes) identifier_ctypes (identifier_byref) identifier_byref )attribute (argument_list (identifier_model_per_iter) identifier_model_per_iter )argument_list )call )argument_list )call )argument_list )call )expression_statement (return_statement (attribute (identifier_model_per_iter) identifier_model_per_iter (identifier_value) identifier_value )attribute )return_statement )block )function_definition )module
Get number of models per iteration. Returns ------- model_per_iter : int The number of models per iteration.
(module (function_definition (function_name_is_valid_device_id) function_name_is_valid_device_id (parameters (identifier_device_id) identifier_device_id )parameters (block (expression_statement (assignment (identifier_valid) identifier_valid (call (attribute (identifier_valid_device_id) identifier_valid_device_id (identifier_match) identifier_match )attribute (argument_list (identifier_device_id) identifier_device_id )argument_list )call )assignment )expression_statement (if_statement (not_operator (identifier_valid) identifier_valid )not_operator (block (expression_statement (call (attribute (identifier_logging) identifier_logging (identifier_error) identifier_error )attribute (argument_list (concatenated_string (string_"A valid device identifier contains ") string_"A valid device identifier contains " (string_"only ascii word characters or dashes. ") string_"only ascii word characters or dashes. " (string_"Device '%s' not added.") string_"Device '%s' not added." )concatenated_string (identifier_device_id) identifier_device_id )argument_list )call )expression_statement )block )if_statement (return_statement (identifier_valid) identifier_valid )return_statement )block )function_definition )module
Check if device identifier is valid. A valid device identifier contains only ascii word characters or dashes. :param device_id: Device identifier :returns: Valid or not.
(module (function_definition (function_name__tighten_triplet) function_name__tighten_triplet (parameters (identifier_self) identifier_self (identifier_max_iterations) identifier_max_iterations (identifier_later_iter) identifier_later_iter (identifier_max_triplets) identifier_max_triplets (identifier_prolong) identifier_prolong )parameters (block (expression_statement (assignment (identifier_triangles) identifier_triangles (call (attribute (identifier_self) identifier_self (identifier_find_triangles) identifier_find_triangles )attribute (argument_list )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_triplet_scores) identifier_triplet_scores (call (attribute (identifier_self) identifier_self (identifier__get_triplet_scores) identifier__get_triplet_scores )attribute (argument_list (identifier_triangles) identifier_triangles )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_sorted_scores) identifier_sorted_scores (call (identifier_sorted) identifier_sorted (argument_list (identifier_triplet_scores) identifier_triplet_scores (keyword_argument (identifier_key) identifier_key (attribute (identifier_triplet_scores) identifier_triplet_scores (identifier_get) identifier_get )attribute )keyword_argument )argument_list )call )assignment )expression_statement (for_statement (identifier_niter) identifier_niter (call (identifier_range) identifier_range (argument_list (identifier_max_iterations) identifier_max_iterations )argument_list )call (block (if_statement (call (attribute (identifier_self) identifier_self (identifier__is_converged) identifier__is_converged )attribute (argument_list (keyword_argument (identifier_integrality_gap_threshold) identifier_integrality_gap_threshold (attribute (identifier_self) identifier_self (identifier_integrality_gap_threshold) identifier_integrality_gap_threshold )attribute )keyword_argument )argument_list )call (block (break_statement )break_statement )block )if_statement (expression_statement (assignment (identifier_add_triplets) identifier_add_triplets (list )list )assignment )expression_statement (for_statement (identifier_triplet_number) identifier_triplet_number (parenthesized_expression (call (identifier_range) identifier_range (argument_list (call (identifier_len) identifier_len (argument_list (identifier_sorted_scores) identifier_sorted_scores )argument_list )call )argument_list )call )parenthesized_expression (block (if_statement (comparison_operator (identifier_triplet_number) identifier_triplet_number (identifier_max_triplets) identifier_max_triplets )comparison_operator (block (break_statement )break_statement )block )if_statement (expression_statement (call (attribute (identifier_add_triplets) identifier_add_triplets (identifier_append) identifier_append )attribute (argument_list (call (attribute (identifier_sorted_scores) identifier_sorted_scores (identifier_pop) identifier_pop )attribute (argument_list )argument_list )call )argument_list )call )expression_statement )block )for_statement (if_statement (boolean_operator (not_operator (identifier_add_triplets) identifier_add_triplets )not_operator (comparison_operator (identifier_prolong) identifier_prolong (False) False )comparison_operator )boolean_operator (block (break_statement )break_statement )block )if_statement (expression_statement (call (attribute (identifier_self) identifier_self (identifier__update_triangles) identifier__update_triangles )attribute (argument_list (identifier_add_triplets) identifier_add_triplets )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_self) identifier_self (identifier__run_mplp) identifier__run_mplp )attribute (argument_list (identifier_later_iter) identifier_later_iter )argument_list )call )expression_statement )block )for_statement )block )function_definition )module
This method finds all the triplets that are eligible and adds them iteratively in the bunch of max_triplets Parameters ---------- max_iterations: integer Maximum number of times we tighten the relaxation later_iter: integer Number of maximum iterations that we want MPLP to run. This is lesser than the initial number of iterations. max_triplets: integer Maximum number of triplets that can be added atmost in one iteration. prolong: bool It sets the continuation of tightening after all the triplets are exhausted
(module (function_definition (function_name_weighted_accuracy) function_name_weighted_accuracy (parameters (identifier_comparisons) identifier_comparisons (identifier_weights) identifier_weights )parameters (block (expression_statement (assignment (identifier_N) identifier_N (call (identifier_len) identifier_len (argument_list (identifier_comparisons) identifier_comparisons )argument_list )call )assignment )expression_statement (if_statement (comparison_operator (subscript (attribute (identifier_weights) identifier_weights (identifier_shape) identifier_shape )attribute (integer_0) integer_0 )subscript (identifier_N) identifier_N )comparison_operator (block (raise_statement (call (identifier_ValueError) identifier_ValueError (argument_list (call (attribute (concatenated_string (string_'weights and comparisons should be of the same') string_'weights and comparisons should be of the same' (string_' length. len(weights) = {} but len(comparisons)') string_' length. len(weights) = {} but len(comparisons)' (string_' = {}') string_' = {}' )concatenated_string (identifier_format) identifier_format )attribute (argument_list (subscript (attribute (identifier_weights) identifier_weights (identifier_shape) identifier_shape )attribute (integer_0) integer_0 )subscript (identifier_N) identifier_N )argument_list )call )argument_list )call )raise_statement )block )if_statement (if_statement (call (attribute (parenthesized_expression (comparison_operator (identifier_weights) identifier_weights (integer_0) integer_0 )comparison_operator )parenthesized_expression (identifier_any) identifier_any )attribute (argument_list )argument_list )call (block (raise_statement (call (identifier_ValueError) identifier_ValueError (argument_list (string_'Weights should all be positive.') string_'Weights should all be positive.' )argument_list )call )raise_statement )block )if_statement (if_statement (comparison_operator (call (attribute (identifier_np) identifier_np (identifier_sum) identifier_sum )attribute (argument_list (identifier_weights) identifier_weights )argument_list )call (integer_0) integer_0 )comparison_operator (block (expression_statement (call (attribute (identifier_warnings) identifier_warnings (identifier_warn) identifier_warn )attribute (argument_list (string_'No nonzero weights, returning 0') string_'No nonzero weights, returning 0' )argument_list )call )expression_statement (return_statement (integer_0) integer_0 )return_statement )block )if_statement (expression_statement (assignment (identifier_valid_idx) identifier_valid_idx (parenthesized_expression (comparison_operator (identifier_comparisons) identifier_comparisons (integer_0) integer_0 )comparison_operator )parenthesized_expression )assignment )expression_statement (if_statement (comparison_operator (call (attribute (identifier_valid_idx) identifier_valid_idx (identifier_sum) identifier_sum )attribute (argument_list )argument_list )call (integer_0) integer_0 )comparison_operator (block (expression_statement (call (attribute (identifier_warnings) identifier_warnings (identifier_warn) identifier_warn )attribute (argument_list (concatenated_string (string_"No reference chords were comparable ") string_"No reference chords were comparable " (string_"to estimated chords, returning 0.") string_"to estimated chords, returning 0." )concatenated_string )argument_list )call )expression_statement (return_statement (integer_0) integer_0 )return_statement )block )if_statement (expression_statement (assignment (identifier_comparisons) identifier_comparisons (subscript (identifier_comparisons) identifier_comparisons (identifier_valid_idx) identifier_valid_idx )subscript )assignment )expression_statement (expression_statement (assignment (identifier_weights) identifier_weights (subscript (identifier_weights) identifier_weights (identifier_valid_idx) identifier_valid_idx )subscript )assignment )expression_statement (expression_statement (assignment (identifier_total_weight) identifier_total_weight (call (identifier_float) identifier_float (argument_list (call (attribute (identifier_np) identifier_np (identifier_sum) identifier_sum )attribute (argument_list (identifier_weights) identifier_weights )argument_list )call )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_normalized_weights) identifier_normalized_weights (binary_operator (call (attribute (identifier_np) identifier_np (identifier_asarray) identifier_asarray )attribute (argument_list (identifier_weights) identifier_weights (keyword_argument (identifier_dtype) identifier_dtype (identifier_float) identifier_float )keyword_argument )argument_list )call (identifier_total_weight) identifier_total_weight )binary_operator )assignment )expression_statement (return_statement (call (attribute (identifier_np) identifier_np (identifier_sum) identifier_sum )attribute (argument_list (binary_operator (identifier_comparisons) identifier_comparisons (identifier_normalized_weights) identifier_normalized_weights )binary_operator )argument_list )call )return_statement )block )function_definition )module
Compute the weighted accuracy of a list of chord comparisons. Examples -------- >>> (ref_intervals, ... ref_labels) = mir_eval.io.load_labeled_intervals('ref.lab') >>> (est_intervals, ... est_labels) = mir_eval.io.load_labeled_intervals('est.lab') >>> est_intervals, est_labels = mir_eval.util.adjust_intervals( ... est_intervals, est_labels, ref_intervals.min(), ... ref_intervals.max(), mir_eval.chord.NO_CHORD, ... mir_eval.chord.NO_CHORD) >>> (intervals, ... ref_labels, ... est_labels) = mir_eval.util.merge_labeled_intervals( ... ref_intervals, ref_labels, est_intervals, est_labels) >>> durations = mir_eval.util.intervals_to_durations(intervals) >>> # Here, we're using the "thirds" function to compare labels >>> # but any of the comparison functions would work. >>> comparisons = mir_eval.chord.thirds(ref_labels, est_labels) >>> score = mir_eval.chord.weighted_accuracy(comparisons, durations) Parameters ---------- comparisons : np.ndarray List of chord comparison scores, in [0, 1] or -1 weights : np.ndarray Weights (not necessarily normalized) for each comparison. This can be a list of interval durations Returns ------- score : float Weighted accuracy
(module (function_definition (function_name__value_validate) function_name__value_validate (parameters (identifier_self) identifier_self (identifier_value) identifier_value (identifier_rnge) identifier_rnge (default_parameter (identifier_identifier) identifier_identifier (string_"Given") string_"Given" )default_parameter )parameters (block (if_statement (boolean_operator (comparison_operator (identifier_value) identifier_value (None) None )comparison_operator (parenthesized_expression (boolean_operator (comparison_operator (identifier_value) identifier_value (subscript (identifier_rnge) identifier_rnge (integer_0) integer_0 )subscript )comparison_operator (comparison_operator (identifier_value) identifier_value (subscript (identifier_rnge) identifier_rnge (integer_1) integer_1 )subscript )comparison_operator )boolean_operator )parenthesized_expression )boolean_operator (block (raise_statement (call (identifier_ValueError) identifier_ValueError (argument_list (binary_operator (string_'%s value must be between %d and %d.') string_'%s value must be between %d and %d.' (tuple (identifier_identifier) identifier_identifier (subscript (identifier_rnge) identifier_rnge (integer_0) integer_0 )subscript (subscript (identifier_rnge) identifier_rnge (integer_1) integer_1 )subscript )tuple )binary_operator )argument_list )call )raise_statement )block )if_statement )block )function_definition )module
Make sure a value is within a given range
(module (function_definition (function_name_run) function_name_run (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (attribute (attribute (identifier_self) identifier_self (identifier_otherThread) identifier_otherThread )attribute (identifier__Thread__stderr) identifier__Thread__stderr )attribute (attribute (identifier_self) identifier_self (identifier__stderr) identifier__stderr )attribute )assignment )expression_statement (if_statement (call (identifier_hasattr) identifier_hasattr (argument_list (attribute (identifier_self) identifier_self (identifier_otherThread) identifier_otherThread )attribute (string_'_Thread__stop') string_'_Thread__stop' )argument_list )call (block (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_otherThread) identifier_otherThread )attribute (identifier__Thread__stop) identifier__Thread__stop )attribute (argument_list )argument_list )call )expression_statement )block )if_statement (while_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_otherThread) identifier_otherThread )attribute (identifier_isAlive) identifier_isAlive )attribute (argument_list )argument_list )call (block (expression_statement (call (attribute (attribute (identifier_ctypes) identifier_ctypes (identifier_pythonapi) identifier_pythonapi )attribute (identifier_PyThreadState_SetAsyncExc) identifier_PyThreadState_SetAsyncExc )attribute (argument_list (call (attribute (identifier_ctypes) identifier_ctypes (identifier_c_long) identifier_c_long )attribute (argument_list (attribute (attribute (identifier_self) identifier_self (identifier_otherThread) identifier_otherThread )attribute (identifier_ident) identifier_ident )attribute )argument_list )call (call (attribute (identifier_ctypes) identifier_ctypes (identifier_py_object) identifier_py_object )attribute (argument_list (attribute (identifier_self) identifier_self (identifier_exception) identifier_exception )attribute )argument_list )call )argument_list )call )expression_statement (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_otherThread) identifier_otherThread )attribute (identifier_join) identifier_join )attribute (argument_list (attribute (identifier_self) identifier_self (identifier_repeatEvery) identifier_repeatEvery )attribute )argument_list )call )expression_statement )block )while_statement (try_statement (block (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier__stderr) identifier__stderr )attribute (identifier_close) identifier_close )attribute (argument_list )argument_list )call )expression_statement )block (except_clause (block (pass_statement )pass_statement )block )except_clause )try_statement )block )function_definition )module
run - The thread main. Will attempt to stop and join the attached thread.
(module (function_definition (function_name_first_name_capture) function_name_first_name_capture (parameters (identifier_records) identifier_records )parameters (block (expression_statement (call (attribute (identifier_logging) identifier_logging (identifier_info) identifier_info )attribute (argument_list (concatenated_string (string_'Applying _first_name_capture generator: ') string_'Applying _first_name_capture generator: ' (string_'making sure ID only contains the first whitespace-delimited ') string_'making sure ID only contains the first whitespace-delimited ' (string_'word.') string_'word.' )concatenated_string )argument_list )call )expression_statement (expression_statement (assignment (identifier_whitespace) identifier_whitespace (call (attribute (identifier_re) identifier_re (identifier_compile) identifier_compile )attribute (argument_list (string_r'\s+') string_r'\s+' )argument_list )call )assignment )expression_statement (for_statement (identifier_record) identifier_record (identifier_records) identifier_records (block (if_statement (call (attribute (identifier_whitespace) identifier_whitespace (identifier_search) identifier_search )attribute (argument_list (attribute (identifier_record) identifier_record (identifier_description) identifier_description )attribute )argument_list )call (block (expression_statement (yield (call (identifier_SeqRecord) identifier_SeqRecord (argument_list (attribute (identifier_record) identifier_record (identifier_seq) identifier_seq )attribute (keyword_argument (identifier_id) identifier_id (attribute (identifier_record) identifier_record (identifier_id) identifier_id )attribute )keyword_argument (keyword_argument (identifier_description) identifier_description (string_"") string_"" )keyword_argument )argument_list )call )yield )expression_statement )block (else_clause (block (expression_statement (yield (identifier_record) identifier_record )yield )expression_statement )block )else_clause )if_statement )block )for_statement )block )function_definition )module
Take only the first whitespace-delimited word as the name of the sequence. Essentially removes any extra text from the sequence's description.
(module (function_definition (function_name_visit_loop) function_name_visit_loop (parameters (identifier_self) identifier_self (identifier_node) identifier_node (default_parameter (identifier_cond) identifier_cond (None) None )default_parameter )parameters (block (for_statement (identifier_stmt) identifier_stmt (attribute (identifier_node) identifier_node (identifier_body) identifier_body )attribute (block (expression_statement (call (attribute (identifier_self) identifier_self (identifier_visit) identifier_visit )attribute (argument_list (identifier_stmt) identifier_stmt )argument_list )call )expression_statement )block )for_statement (expression_statement (assignment (identifier_old_range) identifier_old_range (call (attribute (attribute (identifier_self) identifier_self (identifier_result) identifier_result )attribute (identifier_copy) identifier_copy )attribute (argument_list )argument_list )call )assignment )expression_statement (for_statement (identifier_stmt) identifier_stmt (attribute (identifier_node) identifier_node (identifier_body) identifier_body )attribute (block (expression_statement (call (attribute (identifier_self) identifier_self (identifier_visit) identifier_visit )attribute (argument_list (identifier_stmt) identifier_stmt )argument_list )call )expression_statement )block )for_statement (for_statement (pattern_list (identifier_expr) identifier_expr (identifier_range_) identifier_range_ )pattern_list (call (attribute (identifier_old_range) identifier_old_range (identifier_items) identifier_items )attribute (argument_list )argument_list )call (block (expression_statement (assignment (subscript (attribute (identifier_self) identifier_self (identifier_result) identifier_result )attribute (identifier_expr) identifier_expr )subscript (call (attribute (subscript (attribute (identifier_self) identifier_self (identifier_result) identifier_result )attribute (identifier_expr) identifier_expr )subscript (identifier_widen) identifier_widen )attribute (argument_list (identifier_range_) identifier_range_ )argument_list )call )assignment )expression_statement )block )for_statement (expression_statement (boolean_operator (identifier_cond) identifier_cond (call (attribute (identifier_self) identifier_self (identifier_visit) identifier_visit )attribute (argument_list (identifier_cond) identifier_cond )argument_list )call )boolean_operator )expression_statement (for_statement (identifier_stmt) identifier_stmt (attribute (identifier_node) identifier_node (identifier_body) identifier_body )attribute (block (expression_statement (call (attribute (identifier_self) identifier_self (identifier_visit) identifier_visit )attribute (argument_list (identifier_stmt) identifier_stmt )argument_list )call )expression_statement )block )for_statement (for_statement (identifier_stmt) identifier_stmt (attribute (identifier_node) identifier_node (identifier_orelse) identifier_orelse )attribute (block (expression_statement (call (attribute (identifier_self) identifier_self (identifier_visit) identifier_visit )attribute (argument_list (identifier_stmt) identifier_stmt )argument_list )call )expression_statement )block )for_statement )block )function_definition )module
Handle incremented variables in loop body. >>> import gast as ast >>> from pythran import passmanager, backend >>> node = ast.parse(''' ... def foo(): ... a = b = c = 2 ... while a > 0: ... a -= 1 ... b += 1''') >>> pm = passmanager.PassManager("test") >>> res = pm.gather(RangeValues, node) >>> res['a'] Interval(low=-inf, high=2) >>> res['b'] Interval(low=2, high=inf) >>> res['c'] Interval(low=2, high=2)
(module (function_definition (function_name_disable) function_name_disable (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier__enabled) identifier__enabled )attribute (False) False )assignment )expression_statement (for_statement (identifier_child) identifier_child (attribute (identifier_self) identifier_self (identifier_children) identifier_children )attribute (block (if_statement (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_child) identifier_child (tuple (identifier_Container) identifier_Container (identifier_Widget) identifier_Widget )tuple )argument_list )call (block (expression_statement (call (attribute (identifier_child) identifier_child (identifier_disable) identifier_disable )attribute (argument_list )argument_list )call )expression_statement )block )if_statement )block )for_statement )block )function_definition )module
Disable all the widgets in this container
(module (function_definition (function_name__significant_pathways_dataframe) function_name__significant_pathways_dataframe (parameters (identifier_pvalue_information) identifier_pvalue_information (identifier_side_information) identifier_side_information (identifier_alpha) identifier_alpha )parameters (block (expression_statement (assignment (identifier_significant_pathways) identifier_significant_pathways (call (attribute (identifier_pd) identifier_pd (identifier_concat) identifier_concat )attribute (argument_list (list (identifier_pvalue_information) identifier_pvalue_information (identifier_side_information) identifier_side_information )list (keyword_argument (identifier_axis) identifier_axis (integer_1) integer_1 )keyword_argument )argument_list )call )assignment )expression_statement (expression_statement (assignment (pattern_list (identifier_below_alpha) identifier_below_alpha (identifier_qvalues) identifier_qvalues (identifier__) identifier__ (identifier__) identifier__ )pattern_list (call (identifier_multipletests) identifier_multipletests (argument_list (subscript (identifier_significant_pathways) identifier_significant_pathways (string_"p-value") string_"p-value" )subscript (keyword_argument (identifier_alpha) identifier_alpha (identifier_alpha) identifier_alpha )keyword_argument (keyword_argument (identifier_method) identifier_method (string_"fdr_bh") string_"fdr_bh" )keyword_argument )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_below_alpha) identifier_below_alpha (call (attribute (identifier_pd) identifier_pd (identifier_Series) identifier_Series )attribute (argument_list (identifier_below_alpha) identifier_below_alpha (keyword_argument (identifier_index) identifier_index (attribute (identifier_pvalue_information) identifier_pvalue_information (identifier_index) identifier_index )attribute )keyword_argument (keyword_argument (identifier_name) identifier_name (string_"pass") string_"pass" )keyword_argument )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_qvalues) identifier_qvalues (call (attribute (identifier_pd) identifier_pd (identifier_Series) identifier_Series )attribute (argument_list (identifier_qvalues) identifier_qvalues (keyword_argument (identifier_index) identifier_index (attribute (identifier_pvalue_information) identifier_pvalue_information (identifier_index) identifier_index )attribute )keyword_argument (keyword_argument (identifier_name) identifier_name (string_"q-value") string_"q-value" )keyword_argument )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_significant_pathways) identifier_significant_pathways (call (attribute (identifier_pd) identifier_pd (identifier_concat) identifier_concat )attribute (argument_list (list (identifier_significant_pathways) identifier_significant_pathways (identifier_below_alpha) identifier_below_alpha (identifier_qvalues) identifier_qvalues )list (keyword_argument (identifier_axis) identifier_axis (integer_1) integer_1 )keyword_argument )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_significant_pathways) identifier_significant_pathways (subscript (identifier_significant_pathways) identifier_significant_pathways (subscript (identifier_significant_pathways) identifier_significant_pathways (string_"pass") string_"pass" )subscript )subscript )assignment )expression_statement (expression_statement (call (attribute (identifier_significant_pathways) identifier_significant_pathways (identifier_drop) identifier_drop )attribute (argument_list (string_"pass") string_"pass" (keyword_argument (identifier_axis) identifier_axis (integer_1) integer_1 )keyword_argument (keyword_argument (identifier_inplace) identifier_inplace (True) True )keyword_argument )argument_list )call )expression_statement (expression_statement (assignment (subscript (attribute (identifier_significant_pathways) identifier_significant_pathways (identifier_loc) identifier_loc )attribute (slice (colon) colon )slice (string_"pathway") string_"pathway" )subscript (attribute (identifier_significant_pathways) identifier_significant_pathways (identifier_index) identifier_index )attribute )assignment )expression_statement (return_statement (identifier_significant_pathways) identifier_significant_pathways )return_statement )block )function_definition )module
Create the significant pathways pandas.DataFrame. Given the p-values corresponding to each pathway in a feature, apply the FDR correction for multiple testing and remove those that do not have a q-value of less than `alpha`.
(module (function_definition (function_name_start_logging) function_name_start_logging (parameters (identifier_self) identifier_self (identifier_region) identifier_region (identifier_name) identifier_name )parameters (block (expression_statement (assignment (identifier_ct) identifier_ct (call (attribute (attribute (identifier_self) identifier_self (identifier_session) identifier_session )attribute (identifier_client) identifier_client )attribute (argument_list (string_'cloudtrail') string_'cloudtrail' (keyword_argument (identifier_region_name) identifier_region_name (identifier_region) identifier_region )keyword_argument )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (identifier_ct) identifier_ct (identifier_start_logging) identifier_start_logging )attribute (argument_list (keyword_argument (identifier_Name) identifier_Name (identifier_name) identifier_name )keyword_argument )argument_list )call )expression_statement (expression_statement (call (identifier_auditlog) identifier_auditlog (argument_list (keyword_argument (identifier_event) identifier_event (string_'cloudtrail.start_logging') string_'cloudtrail.start_logging' )keyword_argument (keyword_argument (identifier_actor) identifier_actor (attribute (identifier_self) identifier_self (identifier_ns) identifier_ns )attribute )keyword_argument (keyword_argument (identifier_data) identifier_data (dictionary (pair (string_'account') string_'account' (attribute (attribute (identifier_self) identifier_self (identifier_account) identifier_account )attribute (identifier_account_name) identifier_account_name )attribute )pair (pair (string_'region') string_'region' (identifier_region) identifier_region )pair )dictionary )keyword_argument )argument_list )call )expression_statement (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_log) identifier_log )attribute (identifier_info) identifier_info )attribute (argument_list (call (attribute (string_'Enabled logging for {} ({})') string_'Enabled logging for {} ({})' (identifier_format) identifier_format )attribute (argument_list (identifier_name) identifier_name (identifier_region) identifier_region )argument_list )call )argument_list )call )expression_statement )block )function_definition )module
Turn on logging for a CloudTrail Trail Args: region (`str`): Name of the AWS region name (`str`): Name of the CloudTrail Trail Returns: `None`
(module (function_definition (function_name_init_ui) function_name_init_ui (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_board_width) identifier_board_width (attribute (attribute (identifier_self) identifier_self (identifier_ms_game) identifier_ms_game )attribute (identifier_board_width) identifier_board_width )attribute )assignment )expression_statement (expression_statement (assignment (identifier_board_height) identifier_board_height (attribute (attribute (identifier_self) identifier_self (identifier_ms_game) identifier_ms_game )attribute (identifier_board_height) identifier_board_height )attribute )assignment )expression_statement (expression_statement (call (attribute (identifier_self) identifier_self (identifier_create_grid) identifier_create_grid )attribute (argument_list (identifier_board_width) identifier_board_width (identifier_board_height) identifier_board_height )argument_list )call )expression_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_time) identifier_time )attribute (integer_0) integer_0 )assignment )expression_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_timer) identifier_timer )attribute (call (attribute (identifier_QtCore) identifier_QtCore (identifier_QTimer) identifier_QTimer )attribute (argument_list )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (attribute (attribute (identifier_self) identifier_self (identifier_timer) identifier_timer )attribute (identifier_timeout) identifier_timeout )attribute (identifier_connect) identifier_connect )attribute (argument_list (attribute (identifier_self) identifier_self (identifier_timing_game) identifier_timing_game )attribute )argument_list )call )expression_statement (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_timer) identifier_timer )attribute (identifier_start) identifier_start )attribute (argument_list (integer_1000) integer_1000 )argument_list )call )expression_statement )block )function_definition )module
Init game interface.
(module (function_definition (function_name_dump_in_memory_result) function_name_dump_in_memory_result (parameters (identifier_self) identifier_self (identifier_result) identifier_result (identifier_output_path) identifier_output_path )parameters (block (expression_statement (assignment (identifier_file_count) identifier_file_count (integer_0) integer_0 )assignment )expression_statement (expression_statement (call (attribute (identifier_logger) identifier_logger (identifier_debug) identifier_debug )attribute (argument_list (string_"Dumping in-memory processing results to output folder: %s") string_"Dumping in-memory processing results to output folder: %s" (identifier_output_path) identifier_output_path )argument_list )call )expression_statement (for_statement (pattern_list (identifier_k) identifier_k (identifier_v) identifier_v )pattern_list (call (identifier_iteritems) identifier_iteritems (argument_list (identifier_result) identifier_result )argument_list )call (block (expression_statement (assignment (identifier_cur_output_path) identifier_cur_output_path (call (attribute (attribute (identifier_os) identifier_os (identifier_path) identifier_path )attribute (identifier_join) identifier_join )attribute (argument_list (identifier_output_path) identifier_output_path (identifier_k) identifier_k )argument_list )call )assignment )expression_statement (if_statement (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_v) identifier_v (identifier_dict) identifier_dict )argument_list )call (block (expression_statement (augmented_assignment (identifier_file_count) identifier_file_count (call (attribute (identifier_self) identifier_self (identifier_dump_in_memory_result) identifier_dump_in_memory_result )attribute (argument_list (identifier_v) identifier_v (identifier_cur_output_path) identifier_cur_output_path )argument_list )call )augmented_assignment )expression_statement )block (else_clause (block (if_statement (not_operator (call (attribute (attribute (identifier_os) identifier_os (identifier_path) identifier_path )attribute (identifier_isdir) identifier_isdir )attribute (argument_list (identifier_output_path) identifier_output_path )argument_list )call )not_operator (block (expression_statement (call (attribute (identifier_os) identifier_os (identifier_makedirs) identifier_makedirs )attribute (argument_list (identifier_output_path) identifier_output_path )argument_list )call )expression_statement )block )if_statement (expression_statement (assignment (identifier_filename) identifier_filename (call (attribute (attribute (identifier_os) identifier_os (identifier_path) identifier_path )attribute (identifier_join) identifier_join )attribute (argument_list (identifier_output_path) identifier_output_path (identifier_k) identifier_k )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (identifier_logger) identifier_logger (identifier_debug) identifier_debug )attribute (argument_list (string_"Writing output file: %s") string_"Writing output file: %s" (identifier_filename) identifier_filename )argument_list )call )expression_statement (with_statement (with_clause (with_item (as_pattern (call (identifier_open) identifier_open (argument_list (identifier_filename) identifier_filename (string_'wt') string_'wt' (keyword_argument (identifier_encoding) identifier_encoding (attribute (attribute (identifier_self) identifier_self (identifier_config) identifier_config )attribute (identifier_encoding) identifier_encoding )attribute )keyword_argument )argument_list )call (as_pattern_target (identifier_f) identifier_f )as_pattern_target )as_pattern )with_item )with_clause (block (expression_statement (call (attribute (identifier_f) identifier_f (identifier_write) identifier_write )attribute (argument_list (identifier_v) identifier_v )argument_list )call )expression_statement )block )with_statement (expression_statement (augmented_assignment (identifier_file_count) identifier_file_count (integer_1) integer_1 )augmented_assignment )expression_statement )block )else_clause )if_statement )block )for_statement (return_statement (identifier_file_count) identifier_file_count )return_statement )block )function_definition )module
Recursively dumps the result of our processing into files within the given output path. Args: result: The in-memory result of our processing. output_path: Full path to the folder into which to dump the files. Returns: The number of files generated (integer).
(module (function_definition (function_name_get_nodes_by_tag) function_name_get_nodes_by_tag (parameters (identifier_self) identifier_self (identifier_graph) identifier_graph (identifier_tag_name) identifier_tag_name )parameters (block (for_statement (pattern_list (identifier_node) identifier_node (identifier_real_node) identifier_real_node )pattern_list (call (attribute (identifier_self) identifier_self (identifier_parsed_nodes) identifier_parsed_nodes )attribute (argument_list (identifier_graph) identifier_graph )argument_list )call (block (if_statement (comparison_operator (identifier_tag_name) identifier_tag_name (attribute (identifier_real_node) identifier_real_node (identifier_tags) identifier_tags )attribute )comparison_operator (block (expression_statement (yield (identifier_node) identifier_node )yield )expression_statement )block )if_statement )block )for_statement )block )function_definition )module
yields nodes from graph that have the specified tag
(module (function_definition (function_name_get_next_environment) function_name_get_next_environment (parameters (identifier_env) identifier_env )parameters (block (expression_statement (assignment (identifier_config) identifier_config (call (identifier__config_file) identifier__config_file (argument_list )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (attribute (attribute (identifier_juicer) identifier_juicer (identifier_utils) identifier_utils )attribute (identifier_Log) identifier_Log )attribute (identifier_log_debug) identifier_log_debug )attribute (argument_list (string_"Finding next environment...") string_"Finding next environment..." )argument_list )call )expression_statement (if_statement (comparison_operator (identifier_env) identifier_env (call (attribute (identifier_config) identifier_config (identifier_sections) identifier_sections )attribute (argument_list )argument_list )call )comparison_operator (block (raise_statement (call (identifier_JuicerConfigError) identifier_JuicerConfigError (argument_list (string_"%s is not a server configured in juicer.conf") string_"%s is not a server configured in juicer.conf" (identifier_env) identifier_env )argument_list )call )raise_statement )block )if_statement (expression_statement (assignment (identifier_section) identifier_section (call (identifier_dict) identifier_dict (argument_list (call (attribute (identifier_config) identifier_config (identifier_items) identifier_items )attribute (argument_list (identifier_env) identifier_env )argument_list )call )argument_list )call )assignment )expression_statement (if_statement (comparison_operator (string_'promotes_to') string_'promotes_to' (call (attribute (identifier_section) identifier_section (identifier_keys) identifier_keys )attribute (argument_list )argument_list )call )comparison_operator (block (expression_statement (assignment (identifier_err) identifier_err (binary_operator (string_"Environment `%s` has no entry for `promotes_to`\nCheck man 5 juicer.conf.") string_"Environment `%s` has no entry for `promotes_to`\nCheck man 5 juicer.conf." (identifier_env) identifier_env )binary_operator )assignment )expression_statement (raise_statement (call (identifier_JuicerConfigError) identifier_JuicerConfigError (argument_list (identifier_err) identifier_err )argument_list )call )raise_statement )block )if_statement (return_statement (subscript (identifier_section) identifier_section (string_'promotes_to') string_'promotes_to' )subscript )return_statement )block )function_definition )module
Given an environment, return the next environment in the promotion hierarchy
(module (function_definition (function_name_current_timestamp) function_name_current_timestamp (parameters (identifier_self) identifier_self )parameters (type (identifier_datetime) identifier_datetime )type (block (expression_statement (assignment (identifier_timestamp) identifier_timestamp (call (attribute (identifier_DB) identifier_DB (identifier_get_hash_value) identifier_get_hash_value )attribute (argument_list (attribute (identifier_self) identifier_self (identifier__key) identifier__key )attribute (string_'current_timestamp') string_'current_timestamp' )argument_list )call )assignment )expression_statement (return_statement (call (identifier_datetime_from_isoformat) identifier_datetime_from_isoformat (argument_list (identifier_timestamp) identifier_timestamp )argument_list )call )return_statement )block )function_definition )module
Get the current state timestamp.
(module (function_definition (function_name_feed_fetch_force) function_name_feed_fetch_force (parameters (identifier_request) identifier_request (identifier_id) identifier_id (identifier_redirect_to) identifier_redirect_to )parameters (block (expression_statement (assignment (identifier_feed) identifier_feed (call (attribute (attribute (identifier_Feed) identifier_Feed (identifier_objects) identifier_objects )attribute (identifier_get) identifier_get )attribute (argument_list (keyword_argument (identifier_id) identifier_id (identifier_id) identifier_id )keyword_argument )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (identifier_feed) identifier_feed (identifier_fetch) identifier_fetch )attribute (argument_list (keyword_argument (identifier_force) identifier_force (True) True )keyword_argument )argument_list )call )expression_statement (expression_statement (assignment (identifier_msg) identifier_msg (call (identifier__) identifier__ (argument_list (binary_operator (string_"Fetched tweets for %s") string_"Fetched tweets for %s" (attribute (identifier_feed) identifier_feed (identifier_name) identifier_name )attribute )binary_operator )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (identifier_messages) identifier_messages (identifier_success) identifier_success )attribute (argument_list (identifier_request) identifier_request (identifier_msg) identifier_msg (keyword_argument (identifier_fail_silently) identifier_fail_silently (True) True )keyword_argument )argument_list )call )expression_statement (return_statement (call (identifier_HttpResponseRedirect) identifier_HttpResponseRedirect (argument_list (identifier_redirect_to) identifier_redirect_to )argument_list )call )return_statement )block )function_definition )module
Forcibly fetch tweets for the feed
(module (function_definition (function_name_load_werkzeug) function_name_load_werkzeug (parameters (identifier_path) identifier_path )parameters (block (expression_statement (assignment (subscript (attribute (identifier_sys) identifier_sys (identifier_path) identifier_path )attribute (integer_0) integer_0 )subscript (identifier_path) identifier_path )assignment )expression_statement (expression_statement (call (attribute (attribute (identifier_wz) identifier_wz (identifier___dict__) identifier___dict__ )attribute (identifier_clear) identifier_clear )attribute (argument_list )argument_list )call )expression_statement (for_statement (identifier_key) identifier_key (call (attribute (attribute (identifier_sys) identifier_sys (identifier_modules) identifier_modules )attribute (identifier_keys) identifier_keys )attribute (argument_list )argument_list )call (block (if_statement (boolean_operator (call (attribute (identifier_key) identifier_key (identifier_startswith) identifier_startswith )attribute (argument_list (string_"werkzeug.") string_"werkzeug." )argument_list )call (comparison_operator (identifier_key) identifier_key (string_"werkzeug") string_"werkzeug" )comparison_operator )boolean_operator (block (expression_statement (call (attribute (attribute (identifier_sys) identifier_sys (identifier_modules) identifier_modules )attribute (identifier_pop) identifier_pop )attribute (argument_list (identifier_key) identifier_key (None) None )argument_list )call )expression_statement )block )if_statement )block )for_statement (import_statement (dotted_name (identifier_werkzeug) identifier_werkzeug )dotted_name )import_statement (for_statement (identifier_key) identifier_key (attribute (identifier_werkzeug) identifier_werkzeug (identifier___all__) identifier___all__ )attribute (block (expression_statement (call (identifier_setattr) identifier_setattr (argument_list (identifier_wz) identifier_wz (identifier_key) identifier_key (call (identifier_getattr) identifier_getattr (argument_list (identifier_werkzeug) identifier_werkzeug (identifier_key) identifier_key )argument_list )call )argument_list )call )expression_statement )block )for_statement (expression_statement (assignment (identifier_hg_tag) identifier_hg_tag (call (identifier_find_hg_tag) identifier_find_hg_tag (argument_list (identifier_path) identifier_path )argument_list )call )assignment )expression_statement (try_statement (block (expression_statement (assignment (identifier_f) identifier_f (call (identifier_open) identifier_open (argument_list (call (attribute (attribute (identifier_os) identifier_os (identifier_path) identifier_path )attribute (identifier_join) identifier_join )attribute (argument_list (identifier_path) identifier_path (string_"setup.py") string_"setup.py" )argument_list )call )argument_list )call )assignment )expression_statement )block (except_clause (identifier_IOError) identifier_IOError (block (pass_statement )pass_statement )block )except_clause (else_clause (block (try_statement (block (for_statement (identifier_line) identifier_line (identifier_f) identifier_f (block (expression_statement (assignment (identifier_line) identifier_line (call (attribute (identifier_line) identifier_line (identifier_strip) identifier_strip )attribute (argument_list )argument_list )call )assignment )expression_statement (if_statement (call (attribute (identifier_line) identifier_line (identifier_startswith) identifier_startswith )attribute (argument_list (string_"version=") string_"version=" )argument_list )call (block (return_statement (expression_list (subscript (call (attribute (subscript (identifier_line) identifier_line (slice (integer_8) integer_8 (colon) colon )slice )subscript (identifier_strip) identifier_strip )attribute (argument_list (string_" \t,") string_" \t," )argument_list )call (slice (integer_1) integer_1 (colon) colon (unary_operator (integer_1) integer_1 )unary_operator )slice )subscript (identifier_hg_tag) identifier_hg_tag )expression_list )return_statement )block )if_statement )block )for_statement )block (finally_clause (block (expression_statement (call (attribute (identifier_f) identifier_f (identifier_close) identifier_close )attribute (argument_list )argument_list )call )expression_statement )block )finally_clause )try_statement )block )else_clause )try_statement (expression_statement (call (identifier_print) identifier_print (argument_list (string_"Unknown werkzeug version loaded") string_"Unknown werkzeug version loaded" (keyword_argument (identifier_file) identifier_file (attribute (identifier_sys) identifier_sys (identifier_stderr) identifier_stderr )attribute )keyword_argument )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_sys) identifier_sys (identifier_exit) identifier_exit )attribute (argument_list (integer_2) integer_2 )argument_list )call )expression_statement )block )function_definition )module
Load werkzeug.
(module (function_definition (function_name_warp_object) function_name_warp_object (parameters (identifier_self) identifier_self (identifier_tileMapObj) identifier_tileMapObj )parameters (block (print_statement (string_"Collision") string_"Collision" )print_statement (if_statement (attribute (identifier_tileMapObj) identifier_tileMapObj (identifier_can_warp) identifier_can_warp )attribute (block (if_statement (comparison_operator (attribute (identifier_self) identifier_self (identifier_map_association) identifier_map_association )attribute (attribute (attribute (identifier_self) identifier_self (identifier_exitWarp) identifier_exitWarp )attribute (identifier_map_association) identifier_map_association )attribute )comparison_operator (block (expression_statement (call (attribute (identifier_TileMapManager) identifier_TileMapManager (identifier_load) identifier_load )attribute (argument_list (attribute (identifier_exitWarp) identifier_exitWarp (identifier_map_association) identifier_map_association )attribute )argument_list )call )expression_statement )block )if_statement (expression_statement (assignment (attribute (attribute (identifier_tileMapObj) identifier_tileMapObj (identifier_parent) identifier_parent )attribute (identifier_coords) identifier_coords )attribute (attribute (attribute (identifier_self) identifier_self (identifier_exitWarp) identifier_exitWarp )attribute (identifier_coords) identifier_coords )attribute )assignment )expression_statement )block )if_statement )block )function_definition )module
Warp the tile map object from one warp to another.
(module (function_definition (function_name_writeline) function_name_writeline (parameters (identifier_self) identifier_self (identifier_data) identifier_data )parameters (block (try_statement (block (if_statement (attribute (identifier_self) identifier_self (identifier_ch_mode) identifier_ch_mode )attribute (block (expression_statement (augmented_assignment (identifier_data) identifier_data (string_"\n") string_"\n" )augmented_assignment )expression_statement (expression_statement (assignment (identifier_parts) identifier_parts (call (identifier_split_by_n) identifier_split_by_n (argument_list (identifier_data) identifier_data (attribute (identifier_self) identifier_self (identifier_ch_mode_chunk_size) identifier_ch_mode_chunk_size )attribute )argument_list )call )assignment )expression_statement (for_statement (identifier_split_str) identifier_split_str (identifier_parts) identifier_parts (block (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_port) identifier_port )attribute (identifier_write) identifier_write )attribute (argument_list (call (attribute (identifier_split_str) identifier_split_str (identifier_encode) identifier_encode )attribute (argument_list )argument_list )call )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_time) identifier_time (identifier_sleep) identifier_sleep )attribute (argument_list (attribute (identifier_self) identifier_self (identifier_ch_mode_ch_delay) identifier_ch_mode_ch_delay )attribute )argument_list )call )expression_statement )block )for_statement )block (else_clause (block (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_port) identifier_port )attribute (identifier_write) identifier_write )attribute (argument_list (call (attribute (parenthesized_expression (binary_operator (identifier_data) identifier_data (string_"\n") string_"\n" )binary_operator )parenthesized_expression (identifier_encode) identifier_encode )attribute (argument_list )argument_list )call )argument_list )call )expression_statement )block )else_clause )if_statement )block (except_clause (as_pattern (identifier_SerialException) identifier_SerialException (as_pattern_target (identifier_err) identifier_err )as_pattern_target )as_pattern (block (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_logger) identifier_logger )attribute (identifier_exception) identifier_exception )attribute (argument_list (call (attribute (string_"SerialError occured while trying to write data {}.") string_"SerialError occured while trying to write data {}." (identifier_format) identifier_format )attribute (argument_list (identifier_data) identifier_data )argument_list )call )argument_list )call )expression_statement (raise_statement (call (identifier_RuntimeError) identifier_RuntimeError (argument_list (call (identifier_str) identifier_str (argument_list (identifier_err) identifier_err )argument_list )call )argument_list )call )raise_statement )block )except_clause )try_statement )block )function_definition )module
Writes data to serial port. :param data: Data to write :return: Nothing :raises: IOError if SerialException occurs.
(module (function_definition (function_name_delete) function_name_delete (parameters (identifier_self) identifier_self (identifier_option) identifier_option )parameters (block (if_statement (comparison_operator (attribute (identifier_self) identifier_self (identifier_config) identifier_config )attribute (None) None )comparison_operator (block (if_statement (comparison_operator (identifier_option) identifier_option (attribute (identifier_self) identifier_self (identifier_config) identifier_config )attribute )comparison_operator (block (delete_statement (subscript (attribute (identifier_self) identifier_self (identifier_config) identifier_config )attribute (identifier_option) identifier_option )subscript )delete_statement )block )if_statement )block )if_statement )block )function_definition )module
Deletes an option if exists
(module (function_definition (function_name_user_can_delete_attachments) function_name_user_can_delete_attachments (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_context) identifier_context (attribute (identifier_self) identifier_self (identifier_context) identifier_context )attribute )assignment )expression_statement (expression_statement (assignment (identifier_user) identifier_user (call (attribute (identifier_api) identifier_api (identifier_get_current_user) identifier_get_current_user )attribute (argument_list )argument_list )call )assignment )expression_statement (if_statement (not_operator (call (attribute (identifier_self) identifier_self (identifier_is_ar_editable) identifier_is_ar_editable )attribute (argument_list )argument_list )call )not_operator (block (return_statement (False) False )return_statement )block )if_statement (return_statement (boolean_operator (parenthesized_expression (boolean_operator (call (attribute (identifier_self) identifier_self (identifier_user_can_add_attachments) identifier_user_can_add_attachments )attribute (argument_list )argument_list )call (not_operator (call (attribute (identifier_user) identifier_user (identifier_allowed) identifier_allowed )attribute (argument_list (identifier_context) identifier_context (list (string_"Client") string_"Client" )list )argument_list )call )not_operator )boolean_operator )parenthesized_expression (line_continuation_\) line_continuation_\ (call (attribute (identifier_self) identifier_self (identifier_user_can_update_attachments) identifier_user_can_update_attachments )attribute (argument_list )argument_list )call )boolean_operator )return_statement )block )function_definition )module
Checks if the current logged in user is allowed to delete attachments
(module (function_definition (function_name__collect_cpu_info) function_name__collect_cpu_info (parameters (identifier_run_info) identifier_run_info )parameters (block (expression_statement (assignment (identifier_cpu_info) identifier_cpu_info (dictionary )dictionary )assignment )expression_statement (expression_statement (assignment (subscript (identifier_cpu_info) identifier_cpu_info (string_"num_cores") string_"num_cores" )subscript (call (attribute (identifier_multiprocessing) identifier_multiprocessing (identifier_cpu_count) identifier_cpu_count )attribute (argument_list )argument_list )call )assignment )expression_statement (import_statement (dotted_name (identifier_cpuinfo) identifier_cpuinfo )dotted_name )import_statement (expression_statement (assignment (identifier_info) identifier_info (call (attribute (identifier_cpuinfo) identifier_cpuinfo (identifier_get_cpu_info) identifier_get_cpu_info )attribute (argument_list )argument_list )call )assignment )expression_statement (expression_statement (assignment (subscript (identifier_cpu_info) identifier_cpu_info (string_"cpu_info") string_"cpu_info" )subscript (subscript (identifier_info) identifier_info (string_"brand") string_"brand" )subscript )assignment )expression_statement (expression_statement (assignment (subscript (identifier_cpu_info) identifier_cpu_info (string_"mhz_per_cpu") string_"mhz_per_cpu" )subscript (binary_operator (subscript (subscript (identifier_info) identifier_info (string_"hz_advertised_raw") string_"hz_advertised_raw" )subscript (integer_0) integer_0 )subscript (float_1.0e6) float_1.0e6 )binary_operator )assignment )expression_statement (expression_statement (assignment (subscript (subscript (identifier_run_info) identifier_run_info (string_"machine_config") string_"machine_config" )subscript (string_"cpu_info") string_"cpu_info" )subscript (identifier_cpu_info) identifier_cpu_info )assignment )expression_statement )block )function_definition )module
Collect the CPU information for the local environment.
(module (function_definition (function_name_legend) function_name_legend (parameters (identifier_self) identifier_self (identifier_values) identifier_values )parameters (block (if_statement (not_operator (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_values) identifier_values (identifier_list) identifier_list )argument_list )call )not_operator (block (raise_statement (call (identifier_TypeError) identifier_TypeError (argument_list (string_"legend must be a list of labels") string_"legend must be a list of labels" )argument_list )call )raise_statement )block )if_statement (expression_statement (assignment (subscript (attribute (identifier_self) identifier_self (identifier_options) identifier_options )attribute (string_"legend") string_"legend" )subscript (identifier_values) identifier_values )assignment )expression_statement )block )function_definition )module
Set the legend labels. Args: values (list): list of labels. Raises: ValueError: legend must be a list of labels.
(module (function_definition (function_name_store_meta_data) function_name_store_meta_data (parameters (identifier_self) identifier_self (default_parameter (identifier_copy_path) identifier_copy_path (None) None )default_parameter )parameters (block (if_statement (identifier_copy_path) identifier_copy_path (block (expression_statement (assignment (identifier_meta_file_path_json) identifier_meta_file_path_json (call (attribute (attribute (identifier_os) identifier_os (identifier_path) identifier_path )attribute (identifier_join) identifier_join )attribute (argument_list (identifier_copy_path) identifier_copy_path (call (attribute (attribute (identifier_self) identifier_self (identifier_state) identifier_state )attribute (identifier_get_storage_path) identifier_get_storage_path )attribute (argument_list )argument_list )call (attribute (identifier_storage) identifier_storage (identifier_FILE_NAME_META_DATA) identifier_FILE_NAME_META_DATA )attribute )argument_list )call )assignment )expression_statement )block (else_clause (block (if_statement (comparison_operator (attribute (attribute (identifier_self) identifier_self (identifier_state) identifier_state )attribute (identifier_file_system_path) identifier_file_system_path )attribute (None) None )comparison_operator (block (expression_statement (call (attribute (identifier_logger) identifier_logger (identifier_error) identifier_error )attribute (argument_list (call (attribute (concatenated_string (string_"Meta data of {0} can be stored temporary arbitrary but by default first after the ") string_"Meta data of {0} can be stored temporary arbitrary but by default first after the " (string_"respective state was stored and a file system path is set.") string_"respective state was stored and a file system path is set." )concatenated_string (identifier_format) identifier_format )attribute (argument_list (identifier_self) identifier_self )argument_list )call )argument_list )call )expression_statement (return_statement )return_statement )block )if_statement (expression_statement (assignment (identifier_meta_file_path_json) identifier_meta_file_path_json (call (attribute (attribute (identifier_os) identifier_os (identifier_path) identifier_path )attribute (identifier_join) identifier_join )attribute (argument_list (attribute (attribute (identifier_self) identifier_self (identifier_state) identifier_state )attribute (identifier_file_system_path) identifier_file_system_path )attribute (attribute (identifier_storage) identifier_storage (identifier_FILE_NAME_META_DATA) identifier_FILE_NAME_META_DATA )attribute )argument_list )call )assignment )expression_statement )block )else_clause )if_statement (expression_statement (assignment (identifier_meta_data) identifier_meta_data (call (identifier_deepcopy) identifier_deepcopy (argument_list (attribute (identifier_self) identifier_self (identifier_meta) identifier_meta )attribute )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (identifier_self) identifier_self (identifier__generate_element_meta_data) identifier__generate_element_meta_data )attribute (argument_list (identifier_meta_data) identifier_meta_data )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_storage_utils) identifier_storage_utils (identifier_write_dict_to_json) identifier_write_dict_to_json )attribute (argument_list (identifier_meta_data) identifier_meta_data (identifier_meta_file_path_json) identifier_meta_file_path_json )argument_list )call )expression_statement )block )function_definition )module
Save meta data of state model to the file system This method generates a dictionary of the meta data of the state together with the meta data of all state elements (data ports, outcomes, etc.) and stores it on the filesystem. Secure that the store meta data method is called after storing the core data otherwise the last_stored_path is maybe wrong or None. The copy path is considered to be a state machine file system path but not the current one but e.g. of a as copy saved state machine. The meta data will be stored in respective relative state folder in the state machine hierarchy. This folder has to exist. Dues the core elements of the state machine has to be stored first. :param str copy_path: Optional copy path if meta data is not stored to the file system path of state machine
(module (function_definition (function_name_reset_status) function_name_reset_status (parameters (identifier_self) identifier_self )parameters (block (for_statement (identifier_row) identifier_row (call (identifier_range) identifier_range (argument_list (call (attribute (attribute (identifier_self) identifier_self (identifier_table) identifier_table )attribute (identifier_rowCount) identifier_rowCount )attribute (argument_list )argument_list )call )argument_list )call (block (expression_statement (assignment (identifier_status_item) identifier_status_item (call (attribute (attribute (identifier_self) identifier_self (identifier_table) identifier_table )attribute (identifier_item) identifier_item )attribute (argument_list (identifier_row) identifier_row (integer_1) integer_1 )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (identifier_status_item) identifier_status_item (identifier_setText) identifier_setText )attribute (argument_list (call (attribute (identifier_self) identifier_self (identifier_tr) identifier_tr )attribute (argument_list (string_'') string_'' )argument_list )call )argument_list )call )expression_statement )block )for_statement )block )function_definition )module
Set all scenarios' status to empty in the table.
(module (function_definition (function_name__asdict) function_name__asdict (parameters (identifier_self) identifier_self )parameters (block (with_statement (with_clause (with_item (attribute (identifier_self) identifier_self (identifier__cond) identifier__cond )attribute )with_item )with_clause (block (if_statement (comparison_operator (attribute (identifier_self) identifier_self (identifier__prompt) identifier__prompt )attribute (None) None )comparison_operator (block (return_statement )return_statement )block )if_statement (return_statement (dictionary (pair (string_'id') string_'id' (attribute (attribute (identifier_self) identifier_self (identifier__prompt) identifier__prompt )attribute (identifier_id) identifier_id )attribute )pair (pair (string_'message') string_'message' (attribute (attribute (identifier_self) identifier_self (identifier__prompt) identifier__prompt )attribute (identifier_message) identifier_message )attribute )pair (pair (string_'text-input') string_'text-input' (attribute (attribute (identifier_self) identifier_self (identifier__prompt) identifier__prompt )attribute (identifier_text_input) identifier_text_input )attribute )pair )dictionary )return_statement )block )with_statement )block )function_definition )module
Return a dictionary representation of the current prompt.
(module (function_definition (function_name_parse) function_name_parse (parameters (identifier_self) identifier_self (default_parameter (identifier_debug) identifier_debug (False) False )default_parameter )parameters (block (if_statement (comparison_operator (attribute (identifier_self) identifier_self (identifier__parsed) identifier__parsed )attribute (None) None )comparison_operator (block (try_statement (block (if_statement (comparison_operator (attribute (identifier_self) identifier_self (identifier__mode) identifier__mode )attribute (string_"html") string_"html" )comparison_operator (block (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier__parsed) identifier__parsed )attribute (call (attribute (identifier_self) identifier_self (identifier_html) identifier_html )attribute (argument_list (attribute (identifier_self) identifier_self (identifier__content) identifier__content )attribute (attribute (identifier_self) identifier_self (identifier__show_everything) identifier__show_everything )attribute (attribute (identifier_self) identifier_self (identifier__translation) identifier__translation )attribute )argument_list )call )assignment )expression_statement )block (else_clause (block (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier__parsed) identifier__parsed )attribute (call (attribute (identifier_self) identifier_self (identifier_rst) identifier_rst )attribute (argument_list (attribute (identifier_self) identifier_self (identifier__content) identifier__content )attribute (attribute (identifier_self) identifier_self (identifier__show_everything) identifier__show_everything )attribute (attribute (identifier_self) identifier_self (identifier__translation) identifier__translation )attribute (keyword_argument (identifier_debug) identifier_debug (identifier_debug) identifier_debug )keyword_argument )argument_list )call )assignment )expression_statement )block )else_clause )if_statement )block (except_clause (as_pattern (identifier_Exception) identifier_Exception (as_pattern_target (identifier_e) identifier_e )as_pattern_target )as_pattern (block (if_statement (identifier_debug) identifier_debug (block (raise_statement (call (identifier_BaseException) identifier_BaseException (argument_list (string_"Parsing failed") string_"Parsing failed" )argument_list )call (identifier_e) identifier_e )raise_statement )block (else_clause (block (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier__parsed) identifier__parsed )attribute (call (attribute (call (attribute (attribute (identifier_self) identifier_self (identifier__translation) identifier__translation )attribute (identifier_gettext) identifier_gettext )attribute (argument_list (string_"<b>Parsing failed</b>: <pre>{}</pre>") string_"<b>Parsing failed</b>: <pre>{}</pre>" )argument_list )call (identifier_format) identifier_format )attribute (argument_list (call (attribute (identifier_html) identifier_html (identifier_escape) identifier_escape )attribute (argument_list (attribute (identifier_self) identifier_self (identifier__content) identifier__content )attribute )argument_list )call )argument_list )call )assignment )expression_statement )block )else_clause )if_statement )block )except_clause )try_statement )block )if_statement (return_statement (attribute (identifier_self) identifier_self (identifier__parsed) identifier__parsed )attribute )return_statement )block )function_definition )module
Returns parsed text
(module (function_definition (function_name_start_stream) function_name_start_stream (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_tracking_terms) identifier_tracking_terms (call (attribute (attribute (identifier_self) identifier_self (identifier_term_checker) identifier_term_checker )attribute (identifier_tracking_terms) identifier_tracking_terms )attribute (argument_list )argument_list )call )assignment )expression_statement (if_statement (boolean_operator (comparison_operator (call (identifier_len) identifier_len (argument_list (identifier_tracking_terms) identifier_tracking_terms )argument_list )call (integer_0) integer_0 )comparison_operator (attribute (identifier_self) identifier_self (identifier_unfiltered) identifier_unfiltered )attribute )boolean_operator (block (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_stream) identifier_stream )attribute (call (attribute (identifier_tweepy) identifier_tweepy (identifier_Stream) identifier_Stream )attribute (argument_list (attribute (identifier_self) identifier_self (identifier_auth) identifier_auth )attribute (attribute (identifier_self) identifier_self (identifier_listener) identifier_listener )attribute (keyword_argument (identifier_stall_warnings) identifier_stall_warnings (True) True )keyword_argument (keyword_argument (identifier_timeout) identifier_timeout (integer_90) integer_90 )keyword_argument (keyword_argument (identifier_retry_count) identifier_retry_count (attribute (identifier_self) identifier_self (identifier_retry_count) identifier_retry_count )attribute )keyword_argument )argument_list )call )assignment )expression_statement (if_statement (comparison_operator (call (identifier_len) identifier_len (argument_list (identifier_tracking_terms) identifier_tracking_terms )argument_list )call (integer_0) integer_0 )comparison_operator (block (expression_statement (call (attribute (identifier_logger) identifier_logger (identifier_info) identifier_info )attribute (argument_list (string_"Starting new twitter stream with %s terms:") string_"Starting new twitter stream with %s terms:" (call (identifier_len) identifier_len (argument_list (identifier_tracking_terms) identifier_tracking_terms )argument_list )call )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_logger) identifier_logger (identifier_info) identifier_info )attribute (argument_list (string_" %s") string_" %s" (call (identifier_repr) identifier_repr (argument_list (identifier_tracking_terms) identifier_tracking_terms )argument_list )call )argument_list )call )expression_statement (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_stream) identifier_stream )attribute (identifier_filter) identifier_filter )attribute (argument_list (keyword_argument (identifier_track) identifier_track (identifier_tracking_terms) identifier_tracking_terms )keyword_argument (keyword_argument (identifier_async) identifier_async (True) True )keyword_argument (keyword_argument (identifier_languages) identifier_languages (attribute (identifier_self) identifier_self (identifier_languages) identifier_languages )attribute )keyword_argument )argument_list )call )expression_statement )block (else_clause (block (expression_statement (call (attribute (identifier_logger) identifier_logger (identifier_info) identifier_info )attribute (argument_list (string_"Starting new unfiltered stream") string_"Starting new unfiltered stream" )argument_list )call )expression_statement (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_stream) identifier_stream )attribute (identifier_sample) identifier_sample )attribute (argument_list (keyword_argument (identifier_async) identifier_async (True) True )keyword_argument (keyword_argument (identifier_languages) identifier_languages (attribute (identifier_self) identifier_self (identifier_languages) identifier_languages )attribute )keyword_argument )argument_list )call )expression_statement )block )else_clause )if_statement )block )if_statement )block )function_definition )module
Starts a stream with teh current tracking terms
(module (function_definition (function_name__remove_duplicate_files) function_name__remove_duplicate_files (parameters (identifier_xs) identifier_xs )parameters (block (expression_statement (assignment (identifier_seen) identifier_seen (call (identifier_set) identifier_set (argument_list (list )list )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_out) identifier_out (list )list )assignment )expression_statement (for_statement (identifier_x) identifier_x (identifier_xs) identifier_xs (block (if_statement (comparison_operator (subscript (identifier_x) identifier_x (string_"path") string_"path" )subscript (identifier_seen) identifier_seen )comparison_operator (block (expression_statement (call (attribute (identifier_out) identifier_out (identifier_append) identifier_append )attribute (argument_list (identifier_x) identifier_x )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_seen) identifier_seen (identifier_add) identifier_add )attribute (argument_list (subscript (identifier_x) identifier_x (string_"path") string_"path" )subscript )argument_list )call )expression_statement )block )if_statement )block )for_statement (return_statement (identifier_out) identifier_out )return_statement )block )function_definition )module
Remove files specified multiple times in a list.
(module (function_definition (function_name_equals) function_name_equals (parameters (identifier_self) identifier_self (identifier_junc) identifier_junc )parameters (block (if_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_left) identifier_left )attribute (identifier_equals) identifier_equals )attribute (argument_list (attribute (identifier_junc) identifier_junc (identifier_left) identifier_left )attribute )argument_list )call (block (return_statement (False) False )return_statement )block )if_statement (if_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_right) identifier_right )attribute (identifier_equals) identifier_equals )attribute (argument_list (attribute (identifier_junc) identifier_junc (identifier_right) identifier_right )attribute )argument_list )call (block (return_statement (False) False )return_statement )block )if_statement (return_statement (True) True )return_statement )block )function_definition )module
test equality with another junction
(module (function_definition (function_name_l2_regularizer) function_name_l2_regularizer (parameters (default_parameter (identifier_weight) identifier_weight (float_1.0) float_1.0 )default_parameter (default_parameter (identifier_scope) identifier_scope (None) None )default_parameter )parameters (block (function_definition (function_name_regularizer) function_name_regularizer (parameters (identifier_tensor) identifier_tensor )parameters (block (with_statement (with_clause (with_item (call (attribute (identifier_tf) identifier_tf (identifier_name_scope) identifier_name_scope )attribute (argument_list (identifier_scope) identifier_scope (string_'L2Regularizer') string_'L2Regularizer' (list (identifier_tensor) identifier_tensor )list )argument_list )call )with_item )with_clause (block (expression_statement (assignment (identifier_l2_weight) identifier_l2_weight (call (attribute (identifier_tf) identifier_tf (identifier_convert_to_tensor) identifier_convert_to_tensor )attribute (argument_list (identifier_weight) identifier_weight (keyword_argument (identifier_dtype) identifier_dtype (attribute (attribute (identifier_tensor) identifier_tensor (identifier_dtype) identifier_dtype )attribute (identifier_base_dtype) identifier_base_dtype )attribute )keyword_argument (keyword_argument (identifier_name) identifier_name (string_'weight') string_'weight' )keyword_argument )argument_list )call )assignment )expression_statement (return_statement (call (attribute (identifier_tf) identifier_tf (identifier_multiply) identifier_multiply )attribute (argument_list (identifier_l2_weight) identifier_l2_weight (call (attribute (attribute (identifier_tf) identifier_tf (identifier_nn) identifier_nn )attribute (identifier_l2_loss) identifier_l2_loss )attribute (argument_list (identifier_tensor) identifier_tensor )argument_list )call (keyword_argument (identifier_name) identifier_name (string_'value') string_'value' )keyword_argument )argument_list )call )return_statement )block )with_statement )block )function_definition (return_statement (identifier_regularizer) identifier_regularizer )return_statement )block )function_definition )module
Define a L2 regularizer. Args: weight: scale the loss by this factor. scope: Optional scope for name_scope. Returns: a regularizer function.
(module (function_definition (function_name__set_directories) function_name__set_directories (parameters (identifier_self) identifier_self )parameters (block (if_statement (comparison_operator (subscript (attribute (identifier_self) identifier_self (identifier__dirs) identifier__dirs )attribute (string_'initial') string_'initial' )subscript (None) None )comparison_operator (block (expression_statement (assignment (subscript (attribute (identifier_self) identifier_self (identifier__dirs) identifier__dirs )attribute (string_'base') string_'base' )subscript (call (identifier_discover_base_dir) identifier_discover_base_dir (argument_list (subscript (attribute (identifier_self) identifier_self (identifier__dirs) identifier__dirs )attribute (string_'run') string_'run' )subscript )argument_list )call )assignment )expression_statement )block (else_clause (block (expression_statement (assignment (subscript (attribute (identifier_self) identifier_self (identifier__dirs) identifier__dirs )attribute (string_'base') string_'base' )subscript (call (identifier_discover_base_dir) identifier_discover_base_dir (argument_list (subscript (attribute (identifier_self) identifier_self (identifier__dirs) identifier__dirs )attribute (string_'initial') string_'initial' )subscript )argument_list )call )assignment )expression_statement )block )else_clause )if_statement (expression_statement (call (attribute (identifier_self) identifier_self (identifier__update_dirs_on_base) identifier__update_dirs_on_base )attribute (argument_list )argument_list )call )expression_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier__tree_ready) identifier__tree_ready )attribute (call (identifier_verify_dir_structure) identifier_verify_dir_structure (argument_list (subscript (attribute (identifier_self) identifier_self (identifier__dirs) identifier__dirs )attribute (string_'base') string_'base' )subscript )argument_list )call )assignment )expression_statement (if_statement (attribute (identifier_self) identifier_self (identifier__tree_ready) identifier__tree_ready )attribute (block (expression_statement (call (attribute (identifier_self) identifier_self (identifier__read_site_config) identifier__read_site_config )attribute (argument_list )argument_list )call )expression_statement )block )if_statement )block )function_definition )module
Initialize variables based on evidence about the directories.
(module (function_definition (function_name_download) function_name_download (parameters (identifier_self) identifier_self (default_parameter (identifier_filename) identifier_filename (None) None )default_parameter )parameters (block (if_statement (comparison_operator (identifier_filename) identifier_filename (None) None )comparison_operator (block (expression_statement (assignment (identifier_filename) identifier_filename (attribute (identifier_self) identifier_self (identifier_name) identifier_name )attribute )assignment )expression_statement )block )if_statement (with_statement (with_clause (with_item (as_pattern (call (attribute (identifier_self) identifier_self (identifier_remote_open) identifier_remote_open )attribute (argument_list )argument_list )call (as_pattern_target (identifier_infile) identifier_infile )as_pattern_target )as_pattern )with_item )with_clause (block (with_statement (with_clause (with_item (as_pattern (call (identifier_open) identifier_open (argument_list (identifier_filename) identifier_filename (string_'wb') string_'wb' )argument_list )call (as_pattern_target (identifier_outfile) identifier_outfile )as_pattern_target )as_pattern )with_item )with_clause (block (expression_statement (call (attribute (identifier_outfile) identifier_outfile (identifier_write) identifier_write )attribute (argument_list (call (attribute (identifier_infile) identifier_infile (identifier_read) identifier_read )attribute (argument_list )argument_list )call )argument_list )call )expression_statement )block )with_statement )block )with_statement )block )function_definition )module
Download the dataset to a local file. Parameters ---------- filename : str, optional The full path to which the dataset will be saved
(module (function_definition (function_name_containment_angle_bin) function_name_containment_angle_bin (parameters (identifier_self) identifier_self (identifier_egy_bins) identifier_egy_bins (default_parameter (identifier_fraction) identifier_fraction (float_0.68) float_0.68 )default_parameter (default_parameter (identifier_scale_fn) identifier_scale_fn (None) None )default_parameter )parameters (block (expression_statement (assignment (identifier_vals) identifier_vals (call (attribute (identifier_self) identifier_self (identifier_interp_bin) identifier_interp_bin )attribute (argument_list (identifier_egy_bins) identifier_egy_bins (attribute (identifier_self) identifier_self (identifier_dtheta) identifier_dtheta )attribute (keyword_argument (identifier_scale_fn) identifier_scale_fn (identifier_scale_fn) identifier_scale_fn )keyword_argument )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_dtheta) identifier_dtheta (call (attribute (identifier_np) identifier_np (identifier_radians) identifier_radians )attribute (argument_list (binary_operator (subscript (attribute (identifier_self) identifier_self (identifier_dtheta) identifier_dtheta )attribute (slice (colon) colon )slice (attribute (identifier_np) identifier_np (identifier_newaxis) identifier_newaxis )attribute )subscript (call (attribute (identifier_np) identifier_np (identifier_ones) identifier_ones )attribute (argument_list (attribute (identifier_vals) identifier_vals (identifier_shape) identifier_shape )attribute )argument_list )call )binary_operator )argument_list )call )assignment )expression_statement (return_statement (call (attribute (identifier_self) identifier_self (identifier__calc_containment) identifier__calc_containment )attribute (argument_list (identifier_dtheta) identifier_dtheta (identifier_vals) identifier_vals (identifier_fraction) identifier_fraction )argument_list )call )return_statement )block )function_definition )module
Evaluate the PSF containment angle averaged over energy bins.
(module (function_definition (function_name_smove) function_name_smove (parameters (identifier_self) identifier_self (identifier_src) identifier_src (identifier_dst) identifier_dst (identifier_value) identifier_value )parameters (block (expression_statement (assignment (identifier_src_set) identifier_src_set (call (attribute (identifier_self) identifier_self (identifier__get_set) identifier__get_set )attribute (argument_list (identifier_src) identifier_src (string_'SMOVE') string_'SMOVE' )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_dst_set) identifier_dst_set (call (attribute (identifier_self) identifier_self (identifier__get_set) identifier__get_set )attribute (argument_list (identifier_dst) identifier_dst (string_'SMOVE') string_'SMOVE' )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_value) identifier_value (call (attribute (identifier_self) identifier_self (identifier__encode) identifier__encode )attribute (argument_list (identifier_value) identifier_value )argument_list )call )assignment )expression_statement (if_statement (comparison_operator (identifier_value) identifier_value (identifier_src_set) identifier_src_set )comparison_operator (block (return_statement (False) False )return_statement )block )if_statement (expression_statement (call (attribute (identifier_src_set) identifier_src_set (identifier_discard) identifier_discard )attribute (argument_list (identifier_value) identifier_value )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_dst_set) identifier_dst_set (identifier_add) identifier_add )attribute (argument_list (identifier_value) identifier_value )argument_list )call )expression_statement (expression_statement (assignment (pattern_list (subscript (attribute (identifier_self) identifier_self (identifier_redis) identifier_redis )attribute (call (attribute (identifier_self) identifier_self (identifier__encode) identifier__encode )attribute (argument_list (identifier_src) identifier_src )argument_list )call )subscript (subscript (attribute (identifier_self) identifier_self (identifier_redis) identifier_redis )attribute (call (attribute (identifier_self) identifier_self (identifier__encode) identifier__encode )attribute (argument_list (identifier_dst) identifier_dst )argument_list )call )subscript )pattern_list (expression_list (identifier_src_set) identifier_src_set (identifier_dst_set) identifier_dst_set )expression_list )assignment )expression_statement (return_statement (True) True )return_statement )block )function_definition )module
Emulate smove.
(module (function_definition (function_name_get_nodes) function_name_get_nodes (parameters (identifier_self) identifier_self (identifier_request) identifier_request )parameters (block (expression_statement (assignment (identifier_nodes) identifier_nodes (list )list )assignment )expression_statement (expression_statement (call (attribute (identifier_nodes) identifier_nodes (identifier_append) identifier_append )attribute (argument_list (call (identifier_NavigationNode) identifier_NavigationNode (argument_list (call (identifier__) identifier__ (argument_list (string_'Tags') string_'Tags' )argument_list )call (call (identifier_reverse) identifier_reverse (argument_list (string_'zinnia:tag_list') string_'zinnia:tag_list' )argument_list )call (string_'tags') string_'tags' )argument_list )call )argument_list )call )expression_statement (for_statement (identifier_tag) identifier_tag (call (identifier_tags_published) identifier_tags_published (argument_list )argument_list )call (block (expression_statement (call (attribute (identifier_nodes) identifier_nodes (identifier_append) identifier_append )attribute (argument_list (call (identifier_NavigationNode) identifier_NavigationNode (argument_list (attribute (identifier_tag) identifier_tag (identifier_name) identifier_name )attribute (call (identifier_reverse) identifier_reverse (argument_list (string_'zinnia:tag_detail') string_'zinnia:tag_detail' (keyword_argument (identifier_args) identifier_args (list (attribute (identifier_tag) identifier_tag (identifier_name) identifier_name )attribute )list )keyword_argument )argument_list )call (attribute (identifier_tag) identifier_tag (identifier_pk) identifier_pk )attribute (string_'tags') string_'tags' )argument_list )call )argument_list )call )expression_statement )block )for_statement (return_statement (identifier_nodes) identifier_nodes )return_statement )block )function_definition )module
Return menu's node for tags
(module (function_definition (function_name_deactivate_mfa_device) function_name_deactivate_mfa_device (parameters (identifier_self) identifier_self (identifier_user_name) identifier_user_name (identifier_serial_number) identifier_serial_number )parameters (block (expression_statement (assignment (identifier_user) identifier_user (call (attribute (identifier_self) identifier_self (identifier_get_user) identifier_get_user )attribute (argument_list (identifier_user_name) identifier_user_name )argument_list )call )assignment )expression_statement (if_statement (comparison_operator (identifier_serial_number) identifier_serial_number (attribute (identifier_user) identifier_user (identifier_mfa_devices) identifier_mfa_devices )attribute )comparison_operator (block (raise_statement (call (identifier_IAMNotFoundException) identifier_IAMNotFoundException (argument_list (call (attribute (string_"Device {0} not found") string_"Device {0} not found" (identifier_format) identifier_format )attribute (argument_list (identifier_serial_number) identifier_serial_number )argument_list )call )argument_list )call )raise_statement )block )if_statement (expression_statement (call (attribute (identifier_user) identifier_user (identifier_deactivate_mfa_device) identifier_deactivate_mfa_device )attribute (argument_list (identifier_serial_number) identifier_serial_number )argument_list )call )expression_statement )block )function_definition )module
Deactivate and detach MFA Device from user if device exists.
(module (function_definition (function_name__HandleHelp) function_name__HandleHelp (parameters (identifier_self) identifier_self (identifier_request) identifier_request )parameters (block (expression_statement (assignment (identifier_help_path) identifier_help_path (subscript (call (attribute (attribute (identifier_request) identifier_request (identifier_path) identifier_path )attribute (identifier_split) identifier_split )attribute (argument_list (string_"/") string_"/" (integer_2) integer_2 )argument_list )call (unary_operator (integer_1) integer_1 )unary_operator )subscript )assignment )expression_statement (if_statement (not_operator (identifier_help_path) identifier_help_path )not_operator (block (raise_statement (call (attribute (identifier_werkzeug_exceptions) identifier_werkzeug_exceptions (identifier_Forbidden) identifier_Forbidden )attribute (argument_list (string_"Error: Invalid help path.") string_"Error: Invalid help path." )argument_list )call )raise_statement )block )if_statement (return_statement (call (attribute (identifier_self) identifier_self (identifier__RedirectToRemoteHelp) identifier__RedirectToRemoteHelp )attribute (argument_list (identifier_help_path) identifier_help_path )argument_list )call )return_statement )block )function_definition )module
Handles help requests.
(module (function_definition (function_name_install_monitor) function_name_install_monitor (parameters (identifier_self) identifier_self (typed_parameter (identifier_monitor_pattern) identifier_monitor_pattern (type (identifier_str) identifier_str )type )typed_parameter (typed_parameter (identifier_monitor_stat_func_name) identifier_monitor_stat_func_name (type (identifier_str) identifier_str )type )typed_parameter )parameters (block (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier__monitor) identifier__monitor )attribute (call (attribute (attribute (identifier_mx) identifier_mx (identifier_monitor) identifier_monitor )attribute (identifier_Monitor) identifier_Monitor )attribute (argument_list (keyword_argument (identifier_interval) identifier_interval (attribute (identifier_C) identifier_C (identifier_MEASURE_SPEED_EVERY) identifier_MEASURE_SPEED_EVERY )attribute )keyword_argument (keyword_argument (identifier_stat_func) identifier_stat_func (call (attribute (attribute (identifier_C) identifier_C (identifier_MONITOR_STAT_FUNCS) identifier_MONITOR_STAT_FUNCS )attribute (identifier_get) identifier_get )attribute (argument_list (identifier_monitor_stat_func_name) identifier_monitor_stat_func_name )argument_list )call )keyword_argument (keyword_argument (identifier_pattern) identifier_pattern (identifier_monitor_pattern) identifier_monitor_pattern )keyword_argument (keyword_argument (identifier_sort) identifier_sort (True) True )keyword_argument )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_module) identifier_module )attribute (identifier_install_monitor) identifier_install_monitor )attribute (argument_list (attribute (identifier_self) identifier_self (identifier__monitor) identifier__monitor )attribute )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_logger) identifier_logger (identifier_info) identifier_info )attribute (argument_list (string_"Installed MXNet monitor; pattern='%s'; statistics_func='%s'") string_"Installed MXNet monitor; pattern='%s'; statistics_func='%s'" (identifier_monitor_pattern) identifier_monitor_pattern (identifier_monitor_stat_func_name) identifier_monitor_stat_func_name )argument_list )call )expression_statement )block )function_definition )module
Installs an MXNet monitor onto the underlying module. :param monitor_pattern: Pattern string. :param monitor_stat_func_name: Name of monitor statistics function.
(module (function_definition (function_name_setup_ui) function_name_setup_ui (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_main_vbox) identifier_main_vbox )attribute (call (attribute (identifier_QtGui) identifier_QtGui (identifier_QVBoxLayout) identifier_QVBoxLayout )attribute (argument_list (identifier_self) identifier_self )argument_list )call )assignment )expression_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_import_all_references_cb) identifier_import_all_references_cb )attribute (call (attribute (identifier_QtGui) identifier_QtGui (identifier_QCheckBox) identifier_QCheckBox )attribute (argument_list (string_"Import references") string_"Import references" )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_main_vbox) identifier_main_vbox )attribute (identifier_addWidget) identifier_addWidget )attribute (argument_list (attribute (identifier_self) identifier_self (identifier_import_all_references_cb) identifier_import_all_references_cb )attribute )argument_list )call )expression_statement )block )function_definition )module
Create all ui elements and layouts :returns: None :rtype: None :raises: None
(module (function_definition (function_name_save_coeffs) function_name_save_coeffs (parameters (identifier_coeffs) identifier_coeffs (default_parameter (identifier_out_dir) identifier_out_dir (string_'') string_'' )default_parameter )parameters (block (for_statement (identifier_platform) identifier_platform (call (attribute (identifier_coeffs) identifier_coeffs (identifier_keys) identifier_keys )attribute (argument_list )argument_list )call (block (expression_statement (assignment (identifier_fname) identifier_fname (call (attribute (attribute (identifier_os) identifier_os (identifier_path) identifier_path )attribute (identifier_join) identifier_join )attribute (argument_list (identifier_out_dir) identifier_out_dir (binary_operator (string_"%s_calibration_data.h5") string_"%s_calibration_data.h5" (identifier_platform) identifier_platform )binary_operator )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_fid) identifier_fid (call (attribute (identifier_h5py) identifier_h5py (identifier_File) identifier_File )attribute (argument_list (identifier_fname) identifier_fname (string_'w') string_'w' )argument_list )call )assignment )expression_statement (for_statement (identifier_chan) identifier_chan (call (attribute (subscript (identifier_coeffs) identifier_coeffs (identifier_platform) identifier_platform )subscript (identifier_keys) identifier_keys )attribute (argument_list )argument_list )call (block (expression_statement (call (attribute (identifier_fid) identifier_fid (identifier_create_group) identifier_create_group )attribute (argument_list (identifier_chan) identifier_chan )argument_list )call )expression_statement (expression_statement (assignment (subscript (subscript (identifier_fid) identifier_fid (identifier_chan) identifier_chan )subscript (string_'datetime') string_'datetime' )subscript (subscript (subscript (subscript (identifier_coeffs) identifier_coeffs (identifier_platform) identifier_platform )subscript (identifier_chan) identifier_chan )subscript (string_'datetime') string_'datetime' )subscript )assignment )expression_statement (expression_statement (assignment (subscript (subscript (identifier_fid) identifier_fid (identifier_chan) identifier_chan )subscript (string_'slope1') string_'slope1' )subscript (subscript (subscript (subscript (identifier_coeffs) identifier_coeffs (identifier_platform) identifier_platform )subscript (identifier_chan) identifier_chan )subscript (string_'slope1') string_'slope1' )subscript )assignment )expression_statement (expression_statement (assignment (subscript (subscript (identifier_fid) identifier_fid (identifier_chan) identifier_chan )subscript (string_'intercept1') string_'intercept1' )subscript (subscript (subscript (subscript (identifier_coeffs) identifier_coeffs (identifier_platform) identifier_platform )subscript (identifier_chan) identifier_chan )subscript (string_'intercept1') string_'intercept1' )subscript )assignment )expression_statement (expression_statement (assignment (subscript (subscript (identifier_fid) identifier_fid (identifier_chan) identifier_chan )subscript (string_'slope2') string_'slope2' )subscript (subscript (subscript (subscript (identifier_coeffs) identifier_coeffs (identifier_platform) identifier_platform )subscript (identifier_chan) identifier_chan )subscript (string_'slope2') string_'slope2' )subscript )assignment )expression_statement (expression_statement (assignment (subscript (subscript (identifier_fid) identifier_fid (identifier_chan) identifier_chan )subscript (string_'intercept2') string_'intercept2' )subscript (subscript (subscript (subscript (identifier_coeffs) identifier_coeffs (identifier_platform) identifier_platform )subscript (identifier_chan) identifier_chan )subscript (string_'intercept2') string_'intercept2' )subscript )assignment )expression_statement )block )for_statement (expression_statement (call (attribute (identifier_fid) identifier_fid (identifier_close) identifier_close )attribute (argument_list )argument_list )call )expression_statement (print_statement (binary_operator (string_"Calibration coefficients saved for %s") string_"Calibration coefficients saved for %s" (identifier_platform) identifier_platform )binary_operator )print_statement )block )for_statement )block )function_definition )module
Save calibration coefficients to HDF5 files.
(module (function_definition (function_name_ad_hoc_magic_from_file) function_name_ad_hoc_magic_from_file (parameters (identifier_filename) identifier_filename (dictionary_splat_pattern (identifier_kwargs) identifier_kwargs )dictionary_splat_pattern )parameters (block (with_statement (with_clause (with_item (as_pattern (call (identifier_open) identifier_open (argument_list (identifier_filename) identifier_filename (string_'rb') string_'rb' )argument_list )call (as_pattern_target (identifier_stream) identifier_stream )as_pattern_target )as_pattern )with_item )with_clause (block (expression_statement (assignment (identifier_head) identifier_head (call (attribute (identifier_stream) identifier_stream (identifier_read) identifier_read )attribute (argument_list (integer_16) integer_16 )argument_list )call )assignment )expression_statement (if_statement (comparison_operator (subscript (identifier_head) identifier_head (slice (colon) colon (integer_4) integer_4 )slice )subscript (string_b'\x7fELF') string_b'\x7fELF' )comparison_operator (block (return_statement (string_b'application/x-executable') string_b'application/x-executable' )return_statement )block (elif_clause (comparison_operator (subscript (identifier_head) identifier_head (slice (colon) colon (integer_2) integer_2 )slice )subscript (string_b'MZ') string_b'MZ' )comparison_operator (block (return_statement (string_b'application/x-dosexec') string_b'application/x-dosexec' )return_statement )block )elif_clause (else_clause (block (raise_statement (call (identifier_NotImplementedError) identifier_NotImplementedError (argument_list )argument_list )call )raise_statement )block )else_clause )if_statement )block )with_statement )block )function_definition )module
Ad-hoc emulation of magic.from_file from python-magic.
(module (function_definition (function_name_get_data_files) function_name_get_data_files (parameters (identifier_dname) identifier_dname (default_parameter (identifier_ignore) identifier_ignore (None) None )default_parameter (default_parameter (identifier_parent) identifier_parent (None) None )default_parameter )parameters (block (expression_statement (assignment (identifier_parent) identifier_parent (boolean_operator (identifier_parent) identifier_parent (string_".") string_"." )boolean_operator )assignment )expression_statement (expression_statement (assignment (identifier_ignore) identifier_ignore (boolean_operator (identifier_ignore) identifier_ignore (list )list )boolean_operator )assignment )expression_statement (expression_statement (assignment (identifier_result) identifier_result (list )list )assignment )expression_statement (for_statement (pattern_list (identifier_directory) identifier_directory (identifier_subdirectories) identifier_subdirectories (identifier_filenames) identifier_filenames )pattern_list (call (attribute (identifier_os) identifier_os (identifier_walk) identifier_walk )attribute (argument_list (identifier_dname) identifier_dname )argument_list )call (block (expression_statement (assignment (identifier_resultfiles) identifier_resultfiles (list )list )assignment )expression_statement (for_statement (identifier_exname) identifier_exname (identifier_EXCLUDE_NAMES) identifier_EXCLUDE_NAMES (block (if_statement (comparison_operator (identifier_exname) identifier_exname (identifier_subdirectories) identifier_subdirectories )comparison_operator (block (expression_statement (call (attribute (identifier_subdirectories) identifier_subdirectories (identifier_remove) identifier_remove )attribute (argument_list (identifier_exname) identifier_exname )argument_list )call )expression_statement )block )if_statement )block )for_statement (for_statement (identifier_ig) identifier_ig (identifier_ignore) identifier_ignore (block (if_statement (comparison_operator (identifier_ig) identifier_ig (identifier_subdirectories) identifier_subdirectories )comparison_operator (block (expression_statement (call (attribute (identifier_subdirectories) identifier_subdirectories (identifier_remove) identifier_remove )attribute (argument_list (identifier_ig) identifier_ig )argument_list )call )expression_statement )block )if_statement )block )for_statement (for_statement (identifier_filename) identifier_filename (call (identifier__filter_names) identifier__filter_names (argument_list (identifier_filenames) identifier_filenames )argument_list )call (block (expression_statement (call (attribute (identifier_resultfiles) identifier_resultfiles (identifier_append) identifier_append )attribute (argument_list (identifier_filename) identifier_filename )argument_list )call )expression_statement )block )for_statement (if_statement (identifier_resultfiles) identifier_resultfiles (block (for_statement (identifier_filename) identifier_filename (identifier_resultfiles) identifier_resultfiles (block (expression_statement (assignment (identifier_file_path) identifier_file_path (call (attribute (attribute (identifier_os) identifier_os (identifier_path) identifier_path )attribute (identifier_join) identifier_join )attribute (argument_list (identifier_directory) identifier_directory (identifier_filename) identifier_filename )argument_list )call )assignment )expression_statement (if_statement (identifier_parent) identifier_parent (block (expression_statement (assignment (identifier_file_path) identifier_file_path (call (attribute (identifier_file_path) identifier_file_path (identifier_replace) identifier_replace )attribute (argument_list (binary_operator (identifier_parent) identifier_parent (attribute (identifier_os) identifier_os (identifier_sep) identifier_sep )attribute )binary_operator (string_'') string_'' )argument_list )call )assignment )expression_statement )block )if_statement (expression_statement (call (attribute (identifier_result) identifier_result (identifier_append) identifier_append )attribute (argument_list (identifier_file_path) identifier_file_path )argument_list )call )expression_statement )block )for_statement )block )if_statement )block )for_statement (return_statement (identifier_result) identifier_result )return_statement )block )function_definition )module
Get all the data files that should be included in this distutils Project. 'dname' should be the path to the package that you're distributing. 'ignore' is a list of sub-packages to ignore. This facilitates disparate package hierarchies. That's a fancy way of saying that the 'twisted' package doesn't want to include the 'twisted.conch' package, so it will pass ['conch'] as the value. 'parent' is necessary if you're distributing a subpackage like twisted.conch. 'dname' should point to 'twisted/conch' and 'parent' should point to 'twisted'. This ensures that your data_files are generated correctly, only using relative paths for the first element of the tuple ('twisted/conch/*'). The default 'parent' is the current working directory.
(module (function_definition (function_name_get_fieldsets) function_name_get_fieldsets (parameters (identifier_self) identifier_self (identifier_request) identifier_request (default_parameter (identifier_obj) identifier_obj (None) None )default_parameter )parameters (block (expression_statement (assignment (identifier_fieldsets) identifier_fieldsets (call (identifier_list) identifier_list (argument_list (call (attribute (call (identifier_super) identifier_super (argument_list (identifier_CreateUpdateAdmin) identifier_CreateUpdateAdmin (identifier_self) identifier_self )argument_list )call (identifier_get_fieldsets) identifier_get_fieldsets )attribute (argument_list (keyword_argument (identifier_request) identifier_request (identifier_request) identifier_request )keyword_argument (keyword_argument (identifier_obj) identifier_obj (identifier_obj) identifier_obj )keyword_argument )argument_list )call )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_fields) identifier_fields (call (identifier_set) identifier_set (argument_list )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_to_add) identifier_to_add (call (identifier_set) identifier_set (argument_list )argument_list )call )assignment )expression_statement (for_statement (identifier_fs) identifier_fs (identifier_fieldsets) identifier_fieldsets (block (expression_statement (assignment (identifier_fields) identifier_fields (call (attribute (identifier_fields) identifier_fields (identifier_union) identifier_union )attribute (argument_list (subscript (subscript (identifier_fs) identifier_fs (integer_1) integer_1 )subscript (string_'fields') string_'fields' )subscript )argument_list )call )assignment )expression_statement )block )for_statement (for_statement (pattern_list (identifier_k) identifier_k (identifier_v) identifier_v )pattern_list (call (attribute (subscript (attribute (identifier_self) identifier_self (identifier_ownership_info) identifier_ownership_info )attribute (string_'fields') string_'fields' )subscript (identifier_items) identifier_items )attribute (argument_list )argument_list )call (block (if_statement (parenthesized_expression (boolean_operator (boolean_operator (call (identifier_hasattr) identifier_hasattr (argument_list (attribute (identifier_self) identifier_self (identifier_model) identifier_model )attribute (identifier_k) identifier_k )argument_list )call (comparison_operator (identifier_k) identifier_k (identifier_fields) identifier_fields )comparison_operator )boolean_operator (parenthesized_expression (boolean_operator (not_operator (attribute (identifier_self) identifier_self (identifier_exclude) identifier_exclude )attribute )not_operator (parenthesized_expression (boolean_operator (attribute (identifier_self) identifier_self (identifier_exclude) identifier_exclude )attribute (comparison_operator (identifier_k) identifier_k (attribute (identifier_self) identifier_self (identifier_exclude) identifier_exclude )attribute )comparison_operator )boolean_operator )parenthesized_expression )boolean_operator )parenthesized_expression )boolean_operator )parenthesized_expression (block (if_statement (boolean_operator (parenthesized_expression (boolean_operator (comparison_operator (string_'readonly') string_'readonly' (identifier_v) identifier_v )comparison_operator (not_operator (subscript (identifier_v) identifier_v (string_'readonly') string_'readonly' )subscript )not_operator )boolean_operator )parenthesized_expression (identifier_obj) identifier_obj )boolean_operator (block (expression_statement (call (attribute (identifier_to_add) identifier_to_add (identifier_add) identifier_add )attribute (argument_list (identifier_k) identifier_k )argument_list )call )expression_statement )block )if_statement )block )if_statement )block )for_statement (if_statement (comparison_operator (call (identifier_len) identifier_len (argument_list (identifier_to_add) identifier_to_add )argument_list )call (integer_0) integer_0 )comparison_operator (block (expression_statement (call (attribute (identifier_fieldsets) identifier_fieldsets (identifier_append) identifier_append )attribute (argument_list (tuple (subscript (attribute (identifier_self) identifier_self (identifier_ownership_info) identifier_ownership_info )attribute (string_'label') string_'label' )subscript (dictionary (pair (string_'fields') string_'fields' (call (identifier_tuple) identifier_tuple (argument_list (identifier_to_add) identifier_to_add )argument_list )call )pair )dictionary )tuple )argument_list )call )expression_statement )block )if_statement (return_statement (call (identifier_tuple) identifier_tuple (argument_list (identifier_fieldsets) identifier_fieldsets )argument_list )call )return_statement )block )function_definition )module
Add ownership info fields in fieldset with proper separation. Author: Himanshu Shankar (https://himanshus.com)
(module (function_definition (function_name_auth) function_name_auth (parameters (identifier_self) identifier_self (identifier_transport) identifier_transport (identifier_account_name) identifier_account_name (identifier_password) identifier_password )parameters (block (expression_statement (assignment (identifier_auth_token) identifier_auth_token (call (identifier_AuthToken) identifier_AuthToken (argument_list )argument_list )call )assignment )expression_statement (expression_statement (assignment (attribute (identifier_auth_token) identifier_auth_token (identifier_account_name) identifier_account_name )attribute (identifier_account_name) identifier_account_name )assignment )expression_statement (expression_statement (assignment (identifier_attrs) identifier_attrs (dictionary (pair (attribute (identifier_sconstant) identifier_sconstant (identifier_A_BY) identifier_A_BY )attribute (attribute (identifier_sconstant) identifier_sconstant (identifier_V_NAME) identifier_V_NAME )attribute )pair )dictionary )assignment )expression_statement (expression_statement (assignment (identifier_account) identifier_account (call (attribute (attribute (identifier_SOAPpy) identifier_SOAPpy (identifier_Types) identifier_Types )attribute (identifier_stringType) identifier_stringType )attribute (argument_list (keyword_argument (identifier_data) identifier_data (identifier_account_name) identifier_account_name )keyword_argument (keyword_argument (identifier_attrs) identifier_attrs (identifier_attrs) identifier_attrs )keyword_argument )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_params) identifier_params (dictionary (pair (attribute (identifier_sconstant) identifier_sconstant (identifier_E_ACCOUNT) identifier_E_ACCOUNT )attribute (identifier_account) identifier_account )pair (pair (attribute (identifier_sconstant) identifier_sconstant (identifier_E_PASSWORD) identifier_E_PASSWORD )attribute (identifier_password) identifier_password )pair )dictionary )assignment )expression_statement (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_log) identifier_log )attribute (identifier_debug) identifier_debug )attribute (argument_list (binary_operator (string_'Authenticating account %s') string_'Authenticating account %s' (identifier_account_name) identifier_account_name )binary_operator )argument_list )call )expression_statement (try_statement (block (expression_statement (assignment (identifier_res) identifier_res (call (attribute (identifier_transport) identifier_transport (identifier_invoke) identifier_invoke )attribute (argument_list (attribute (identifier_zconstant) identifier_zconstant (identifier_NS_ZIMBRA_ACC_URL) identifier_NS_ZIMBRA_ACC_URL )attribute (attribute (identifier_sconstant) identifier_sconstant (identifier_AuthRequest) identifier_AuthRequest )attribute (identifier_params) identifier_params (identifier_auth_token) identifier_auth_token )argument_list )call )assignment )expression_statement )block (except_clause (as_pattern (identifier_SoapException) identifier_SoapException (as_pattern_target (identifier_exc) identifier_exc )as_pattern_target )as_pattern (block (raise_statement (call (identifier_AuthException) identifier_AuthException (argument_list (call (identifier_unicode) identifier_unicode (argument_list (identifier_exc) identifier_exc )argument_list )call (identifier_exc) identifier_exc )argument_list )call )raise_statement )block )except_clause )try_statement (expression_statement (assignment (attribute (identifier_auth_token) identifier_auth_token (identifier_token) identifier_token )attribute (attribute (identifier_res) identifier_res (identifier_authToken) identifier_authToken )attribute )assignment )expression_statement (if_statement (call (identifier_hasattr) identifier_hasattr (argument_list (identifier_res) identifier_res (string_'sessionId') string_'sessionId' )argument_list )call (block (expression_statement (assignment (attribute (identifier_auth_token) identifier_auth_token (identifier_session_id) identifier_session_id )attribute (attribute (identifier_res) identifier_res (identifier_sessionId) identifier_sessionId )attribute )assignment )expression_statement )block )if_statement (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_log) identifier_log )attribute (identifier_info) identifier_info )attribute (argument_list (binary_operator (string_'Authenticated account %s, session id %s') string_'Authenticated account %s, session id %s' (tuple (identifier_account_name) identifier_account_name (attribute (identifier_auth_token) identifier_auth_token (identifier_session_id) identifier_session_id )attribute )tuple )binary_operator )argument_list )call )expression_statement (return_statement (identifier_auth_token) identifier_auth_token )return_statement )block )function_definition )module
Authenticates using username and password.
(module (function_definition (function_name_collect_info) function_name_collect_info (parameters (identifier_self) identifier_self )parameters (block (try_statement (block (expression_statement (assignment (identifier_info) identifier_info (dictionary )dictionary )assignment )expression_statement (expression_statement (assignment (identifier_res) identifier_res (call (attribute (identifier_self) identifier_self (identifier__send_request) identifier__send_request )attribute (argument_list (string_'GET') string_'GET' (string_"/") string_"/" )argument_list )call )assignment )expression_statement (expression_statement (assignment (subscript (identifier_info) identifier_info (string_'server') string_'server' )subscript (dictionary )dictionary )assignment )expression_statement (expression_statement (assignment (subscript (subscript (identifier_info) identifier_info (string_'server') string_'server' )subscript (string_'name') string_'name' )subscript (subscript (identifier_res) identifier_res (string_'name') string_'name' )subscript )assignment )expression_statement (expression_statement (assignment (subscript (subscript (identifier_info) identifier_info (string_'server') string_'server' )subscript (string_'version') string_'version' )subscript (subscript (identifier_res) identifier_res (string_'version') string_'version' )subscript )assignment )expression_statement (expression_statement (assignment (subscript (identifier_info) identifier_info (string_'allinfo') string_'allinfo' )subscript (identifier_res) identifier_res )assignment )expression_statement (expression_statement (assignment (subscript (identifier_info) identifier_info (string_'status') string_'status' )subscript (call (attribute (attribute (identifier_self) identifier_self (identifier_cluster) identifier_cluster )attribute (identifier_status) identifier_status )attribute (argument_list )argument_list )call )assignment )expression_statement (expression_statement (assignment (subscript (identifier_info) identifier_info (string_'aliases') string_'aliases' )subscript (call (attribute (attribute (identifier_self) identifier_self (identifier_indices) identifier_indices )attribute (identifier_aliases) identifier_aliases )attribute (argument_list )argument_list )call )assignment )expression_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_info) identifier_info )attribute (identifier_info) identifier_info )assignment )expression_statement (return_statement (True) True )return_statement )block (except_clause (block (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_info) identifier_info )attribute (dictionary )dictionary )assignment )expression_statement (return_statement (False) False )return_statement )block )except_clause )try_statement )block )function_definition )module
Collect info about the connection and fill the info dictionary.
(module (function_definition (function_name_update_DOM) function_name_update_DOM (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_response) identifier_response (call (attribute (identifier_self) identifier_self (identifier_fetch) identifier_fetch )attribute (argument_list )argument_list )call )assignment )expression_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier__DOM) identifier__DOM )attribute (call (attribute (identifier_html) identifier_html (identifier_fromstring) identifier_fromstring )attribute (argument_list (attribute (identifier_response) identifier_response (identifier_text) identifier_text )attribute )argument_list )call )assignment )expression_statement (return_statement (identifier_self) identifier_self )return_statement )block )function_definition )module
Makes a request and updates `self._DOM`. Worth using only if you manually change `self.base_url` or `self.path`. :return: self :rtype: Url
(module (function_definition (function_name_reset) function_name_reset (parameters )parameters (block (if_statement (call (identifier_hasattr) identifier_hasattr (argument_list (attribute (attribute (identifier_ray) identifier_ray (identifier_worker) identifier_worker )attribute (identifier_global_worker) identifier_global_worker )attribute (string_"signal_counters") string_"signal_counters" )argument_list )call (block (expression_statement (assignment (attribute (attribute (attribute (identifier_ray) identifier_ray (identifier_worker) identifier_worker )attribute (identifier_global_worker) identifier_global_worker )attribute (identifier_signal_counters) identifier_signal_counters )attribute (call (identifier_defaultdict) identifier_defaultdict (argument_list (lambda (string_b"0") string_b"0" )lambda )argument_list )call )assignment )expression_statement )block )if_statement )block )function_definition )module
Reset the worker state associated with any signals that this worker has received so far. If the worker calls receive() on a source next, it will get all the signals generated by that source starting with index = 1.
(module (function_definition (function_name_onex) function_name_onex (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_xCols) identifier_xCols (list_comprehension (identifier_i) identifier_i (for_in_clause (identifier_i) identifier_i (call (identifier_range) identifier_range (argument_list (attribute (identifier_self) identifier_self (identifier_nCols) identifier_nCols )attribute )argument_list )call )for_in_clause (if_clause (comparison_operator (subscript (attribute (identifier_self) identifier_self (identifier_colTypes) identifier_colTypes )attribute (identifier_i) identifier_i )subscript (integer_3) integer_3 )comparison_operator )if_clause )list_comprehension )assignment )expression_statement (if_statement (comparison_operator (call (identifier_len) identifier_len (argument_list (identifier_xCols) identifier_xCols )argument_list )call (integer_1) integer_1 )comparison_operator (block (for_statement (identifier_colI) identifier_colI (subscript (subscript (identifier_xCols) identifier_xCols (slice (integer_1) integer_1 (colon) colon )slice )subscript (slice (colon) colon (colon) colon (unary_operator (integer_1) integer_1 )unary_operator )slice )subscript (block (expression_statement (call (attribute (identifier_self) identifier_self (identifier_colDelete) identifier_colDelete )attribute (argument_list (identifier_colI) identifier_colI )argument_list )call )expression_statement )block )for_statement )block )if_statement )block )function_definition )module
delete all X columns except the first one.
(module (function_definition (function_name_set_next_page_params) function_name_set_next_page_params (parameters (identifier_self) identifier_self )parameters (block (if_statement (attribute (identifier_self) identifier_self (identifier_items) identifier_items )attribute (block (expression_statement (assignment (identifier_index) identifier_index (call (attribute (identifier_self) identifier_self (identifier_get_last_item_index) identifier_get_last_item_index )attribute (argument_list )argument_list )call )assignment )expression_statement (expression_statement (assignment (subscript (attribute (identifier_self) identifier_self (identifier_params) identifier_params )attribute (attribute (identifier_self) identifier_self (identifier_mode) identifier_mode )attribute )subscript (call (attribute (identifier_self) identifier_self (identifier_get_next_page_param) identifier_get_next_page_param )attribute (argument_list (subscript (attribute (identifier_self) identifier_self (identifier_items) identifier_items )attribute (identifier_index) identifier_index )subscript )argument_list )call )assignment )expression_statement )block )if_statement )block )function_definition )module
Set the params so that the next page is fetched.
(module (function_definition (function_name_runlist_add_app) function_name_runlist_add_app (parameters (identifier_name) identifier_name (identifier_app) identifier_app (identifier_profile) identifier_profile (identifier_force) identifier_force (dictionary_splat_pattern (identifier_kwargs) identifier_kwargs )dictionary_splat_pattern )parameters (block (expression_statement (assignment (identifier_ctx) identifier_ctx (call (identifier_Context) identifier_Context (argument_list (dictionary_splat (identifier_kwargs) identifier_kwargs )dictionary_splat )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (identifier_ctx) identifier_ctx (identifier_execute_action) identifier_execute_action )attribute (argument_list (string_'runlist:add-app') string_'runlist:add-app' (dictionary_splat (dictionary (pair (string_'storage') string_'storage' (call (attribute (attribute (identifier_ctx) identifier_ctx (identifier_repo) identifier_repo )attribute (identifier_create_secure_service) identifier_create_secure_service )attribute (argument_list (string_'storage') string_'storage' )argument_list )call )pair (pair (string_'name') string_'name' (identifier_name) identifier_name )pair (pair (string_'app') string_'app' (identifier_app) identifier_app )pair (pair (string_'profile') string_'profile' (identifier_profile) identifier_profile )pair (pair (string_'force') string_'force' (identifier_force) identifier_force )pair )dictionary )dictionary_splat )argument_list )call )expression_statement )block )function_definition )module
Add specified application with profile to the specified runlist. Existence of application or profile is not checked.
(module (function_definition (function_name_in_coord_list_pbc) function_name_in_coord_list_pbc (parameters (identifier_fcoord_list) identifier_fcoord_list (identifier_fcoord) identifier_fcoord (default_parameter (identifier_atol) identifier_atol (float_1e-8) float_1e-8 )default_parameter )parameters (block (return_statement (comparison_operator (call (identifier_len) identifier_len (argument_list (call (identifier_find_in_coord_list_pbc) identifier_find_in_coord_list_pbc (argument_list (identifier_fcoord_list) identifier_fcoord_list (identifier_fcoord) identifier_fcoord (keyword_argument (identifier_atol) identifier_atol (identifier_atol) identifier_atol )keyword_argument )argument_list )call )argument_list )call (integer_0) integer_0 )comparison_operator )return_statement )block )function_definition )module
Tests if a particular fractional coord is within a fractional coord_list. Args: fcoord_list: List of fractional coords to test fcoord: A specific fractional coord to test. atol: Absolute tolerance. Defaults to 1e-8. Returns: True if coord is in the coord list.
(module (function_definition (function_name_update_state_active) function_name_update_state_active (parameters (identifier_self) identifier_self )parameters (block (expression_statement (call (attribute (identifier_self) identifier_self (identifier_update_state) identifier_update_state )attribute (argument_list (subscript (attribute (identifier_self) identifier_self (identifier_links) identifier_links )attribute (identifier_REF_UPDATE_STATE_ACTIVE) identifier_REF_UPDATE_STATE_ACTIVE )subscript (dictionary (pair (string_'type') string_'type' (identifier_RUN_ACTIVE) identifier_RUN_ACTIVE )pair )dictionary )argument_list )call )expression_statement (return_statement (call (attribute (identifier_self) identifier_self (identifier_refresh) identifier_refresh )attribute (argument_list )argument_list )call )return_statement )block )function_definition )module
Update the state of the model run to active. Raises an exception if update fails or resource is unknown. Returns ------- ModelRunHandle Refreshed run handle.
(module (function_definition (function_name_is_this_year) function_name_is_this_year (parameters (identifier_self) identifier_self )parameters (block (return_statement (call (identifier_is_current_year) identifier_is_current_year (argument_list (call (attribute (attribute (identifier_datetime) identifier_datetime (identifier_datetime) identifier_datetime )attribute (identifier_combine) identifier_combine )attribute (argument_list (attribute (identifier_self) identifier_self (identifier_date) identifier_date )attribute (call (attribute (identifier_datetime) identifier_datetime (identifier_time) identifier_time )attribute (argument_list )argument_list )call )argument_list )call )argument_list )call )return_statement )block )function_definition )module
Return whether the block occurs after September 1st of this school year.
(module (function_definition (function_name_detect_pattern_format) function_name_detect_pattern_format (parameters (identifier_pattern_filename) identifier_pattern_filename (identifier_encoding) identifier_encoding (identifier_on_word_boundaries) identifier_on_word_boundaries )parameters (block (expression_statement (assignment (identifier_tsv) identifier_tsv (True) True )assignment )expression_statement (expression_statement (assignment (identifier_boundaries) identifier_boundaries (identifier_on_word_boundaries) identifier_on_word_boundaries )assignment )expression_statement (with_statement (with_clause (with_item (as_pattern (call (identifier_open_file) identifier_open_file (argument_list (identifier_pattern_filename) identifier_pattern_filename )argument_list )call (as_pattern_target (identifier_input_file) identifier_input_file )as_pattern_target )as_pattern )with_item )with_clause (block (for_statement (identifier_line) identifier_line (identifier_input_file) identifier_input_file (block (expression_statement (assignment (identifier_line) identifier_line (call (attribute (identifier_line) identifier_line (identifier_decode) identifier_decode )attribute (argument_list (identifier_encoding) identifier_encoding )argument_list )call )assignment )expression_statement (if_statement (comparison_operator (call (attribute (identifier_line) identifier_line (identifier_count) identifier_count )attribute (argument_list (string_'\t') string_'\t' )argument_list )call (integer_1) integer_1 )comparison_operator (block (expression_statement (assignment (identifier_tsv) identifier_tsv (False) False )assignment )expression_statement )block )if_statement (if_statement (comparison_operator (string_'\\b') string_'\\b' (identifier_line) identifier_line )comparison_operator (block (expression_statement (assignment (identifier_boundaries) identifier_boundaries (True) True )assignment )expression_statement )block )if_statement (if_statement (boolean_operator (identifier_boundaries) identifier_boundaries (not_operator (identifier_tsv) identifier_tsv )not_operator )boolean_operator (block (break_statement )break_statement )block )if_statement )block )for_statement )block )with_statement (return_statement (expression_list (identifier_tsv) identifier_tsv (identifier_boundaries) identifier_boundaries )expression_list )return_statement )block )function_definition )module
Automatically detects the pattern file format, and determines whether the Aho-Corasick string matching should pay attention to word boundaries or not. Arguments: - `pattern_filename`: - `encoding`: - `on_word_boundaries`:
(module (function_definition (function_name_serialize) function_name_serialize (parameters (identifier_material_description) identifier_material_description )parameters (block (expression_statement (assignment (identifier_material_description_bytes) identifier_material_description_bytes (call (identifier_bytearray) identifier_bytearray (argument_list (identifier__MATERIAL_DESCRIPTION_VERSION) identifier__MATERIAL_DESCRIPTION_VERSION )argument_list )call )assignment )expression_statement (for_statement (pattern_list (identifier_name) identifier_name (identifier_value) identifier_value )pattern_list (call (identifier_sorted) identifier_sorted (argument_list (call (attribute (identifier_material_description) identifier_material_description (identifier_items) identifier_items )attribute (argument_list )argument_list )call (keyword_argument (identifier_key) identifier_key (lambda (lambda_parameters (identifier_x) identifier_x )lambda_parameters (subscript (identifier_x) identifier_x (integer_0) integer_0 )subscript )lambda )keyword_argument )argument_list )call (block (try_statement (block (expression_statement (call (attribute (identifier_material_description_bytes) identifier_material_description_bytes (identifier_extend) identifier_extend )attribute (argument_list (call (identifier_encode_value) identifier_encode_value (argument_list (call (identifier_to_bytes) identifier_to_bytes (argument_list (identifier_name) identifier_name )argument_list )call )argument_list )call )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_material_description_bytes) identifier_material_description_bytes (identifier_extend) identifier_extend )attribute (argument_list (call (identifier_encode_value) identifier_encode_value (argument_list (call (identifier_to_bytes) identifier_to_bytes (argument_list (identifier_value) identifier_value )argument_list )call )argument_list )call )argument_list )call )expression_statement )block (except_clause (tuple (identifier_TypeError) identifier_TypeError (attribute (identifier_struct) identifier_struct (identifier_error) identifier_error )attribute )tuple (block (raise_statement (call (identifier_InvalidMaterialDescriptionError) identifier_InvalidMaterialDescriptionError (argument_list (call (attribute (string_'Invalid name or value in material description: "{name}"="{value}"') string_'Invalid name or value in material description: "{name}"="{value}"' (identifier_format) identifier_format )attribute (argument_list (keyword_argument (identifier_name) identifier_name (identifier_name) identifier_name )keyword_argument (keyword_argument (identifier_value) identifier_value (identifier_value) identifier_value )keyword_argument )argument_list )call )argument_list )call )raise_statement )block )except_clause )try_statement )block )for_statement (return_statement (dictionary (pair (attribute (attribute (identifier_Tag) identifier_Tag (identifier_BINARY) identifier_BINARY )attribute (identifier_dynamodb_tag) identifier_dynamodb_tag )attribute (call (identifier_bytes) identifier_bytes (argument_list (identifier_material_description_bytes) identifier_material_description_bytes )argument_list )call )pair )dictionary )return_statement )block )function_definition )module
Serialize a material description dictionary into a DynamodDB attribute. :param dict material_description: Material description dictionary :returns: Serialized material description as a DynamoDB binary attribute value :rtype: dict :raises InvalidMaterialDescriptionError: if invalid name or value found in material description
(module (function_definition (function_name_parse_name) function_name_parse_name (parameters (identifier_name) identifier_name )parameters (block (expression_statement (assignment (pattern_list (identifier_inverted) identifier_inverted (identifier_op) identifier_op )pattern_list (expression_list (False) False (identifier_OP_EQ) identifier_OP_EQ )expression_list )assignment )expression_statement (if_statement (comparison_operator (identifier_name) identifier_name (None) None )comparison_operator (block (for_statement (identifier_op_) identifier_op_ (tuple (identifier_OP_NIN) identifier_OP_NIN (identifier_OP_IN) identifier_OP_IN (identifier_OP_NOT) identifier_OP_NOT (identifier_OP_LIKE) identifier_OP_LIKE )tuple (block (if_statement (call (attribute (identifier_name) identifier_name (identifier_endswith) identifier_endswith )attribute (argument_list (identifier_op_) identifier_op_ )argument_list )call (block (expression_statement (assignment (identifier_op) identifier_op (identifier_op_) identifier_op_ )assignment )expression_statement (expression_statement (assignment (identifier_name) identifier_name (subscript (identifier_name) identifier_name (slice (colon) colon (binary_operator (call (identifier_len) identifier_len (argument_list (identifier_name) identifier_name )argument_list )call (call (identifier_len) identifier_len (argument_list (identifier_op) identifier_op )argument_list )call )binary_operator )slice )subscript )assignment )expression_statement (break_statement )break_statement )block )if_statement )block )for_statement (if_statement (call (attribute (identifier_name) identifier_name (identifier_startswith) identifier_startswith )attribute (argument_list (string_'!') string_'!' )argument_list )call (block (expression_statement (assignment (identifier_inverted) identifier_inverted (True) True )assignment )expression_statement (expression_statement (assignment (identifier_name) identifier_name (subscript (identifier_name) identifier_name (slice (integer_1) integer_1 (colon) colon )slice )subscript )assignment )expression_statement )block )if_statement )block )if_statement (return_statement (expression_list (identifier_name) identifier_name (identifier_inverted) identifier_inverted (identifier_op) identifier_op )expression_list )return_statement )block )function_definition )module
Split a query name into field name, operator and whether it is inverted.
(module (function_definition (function_name_Gamma) function_name_Gamma (parameters (identifier_cls) identifier_cls (typed_parameter (identifier_shape) identifier_shape (type (string_'TensorFluent') string_'TensorFluent' )type )typed_parameter (typed_parameter (identifier_scale) identifier_scale (type (string_'TensorFluent') string_'TensorFluent' )type )typed_parameter (typed_default_parameter (identifier_batch_size) identifier_batch_size (type (generic_type (identifier_Optional) identifier_Optional (type_parameter (type (identifier_int) identifier_int )type )type_parameter )generic_type )type (None) None )typed_default_parameter )parameters (type (generic_type (identifier_Tuple) identifier_Tuple (type_parameter (type (identifier_Distribution) identifier_Distribution )type (type (string_'TensorFluent') string_'TensorFluent' )type )type_parameter )generic_type )type (block (if_statement (comparison_operator (attribute (identifier_shape) identifier_shape (identifier_scope) identifier_scope )attribute (attribute (identifier_scale) identifier_scale (identifier_scope) identifier_scope )attribute )comparison_operator (block (raise_statement (call (identifier_ValueError) identifier_ValueError (argument_list (string_'Gamma distribution: parameters must have same scope!') string_'Gamma distribution: parameters must have same scope!' )argument_list )call )raise_statement )block )if_statement (expression_statement (assignment (identifier_concentration) identifier_concentration (attribute (identifier_shape) identifier_shape (identifier_tensor) identifier_tensor )attribute )assignment )expression_statement (expression_statement (assignment (identifier_rate) identifier_rate (binary_operator (integer_1) integer_1 (attribute (identifier_scale) identifier_scale (identifier_tensor) identifier_tensor )attribute )binary_operator )assignment )expression_statement (expression_statement (assignment (identifier_dist) identifier_dist (call (attribute (attribute (identifier_tf) identifier_tf (identifier_distributions) identifier_distributions )attribute (identifier_Gamma) identifier_Gamma )attribute (argument_list (identifier_concentration) identifier_concentration (identifier_rate) identifier_rate )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_batch) identifier_batch (boolean_operator (attribute (identifier_shape) identifier_shape (identifier_batch) identifier_batch )attribute (attribute (identifier_scale) identifier_scale (identifier_batch) identifier_batch )attribute )boolean_operator )assignment )expression_statement (if_statement (boolean_operator (not_operator (identifier_batch) identifier_batch )not_operator (comparison_operator (identifier_batch_size) identifier_batch_size (None) None )comparison_operator )boolean_operator (block (expression_statement (assignment (identifier_t) identifier_t (call (attribute (identifier_dist) identifier_dist (identifier_sample) identifier_sample )attribute (argument_list (identifier_batch_size) identifier_batch_size )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_batch) identifier_batch (True) True )assignment )expression_statement )block (else_clause (block (expression_statement (assignment (identifier_t) identifier_t (call (attribute (identifier_dist) identifier_dist (identifier_sample) identifier_sample )attribute (argument_list )argument_list )call )assignment )expression_statement )block )else_clause )if_statement (expression_statement (assignment (identifier_scope) identifier_scope (call (attribute (attribute (identifier_shape) identifier_shape (identifier_scope) identifier_scope )attribute (identifier_as_list) identifier_as_list )attribute (argument_list )argument_list )call )assignment )expression_statement (return_statement (tuple (identifier_dist) identifier_dist (call (identifier_TensorFluent) identifier_TensorFluent (argument_list (identifier_t) identifier_t (identifier_scope) identifier_scope (keyword_argument (identifier_batch) identifier_batch (identifier_batch) identifier_batch )keyword_argument )argument_list )call )tuple )return_statement )block )function_definition )module
Returns a TensorFluent for the Gamma sampling op with given shape and scale parameters. Args: shape: The shape parameter of the Gamma distribution. scale: The scale parameter of the Gamma distribution. batch_size: The size of the batch (optional). Returns: The Gamma distribution and a TensorFluent sample drawn from the distribution. Raises: ValueError: If parameters do not have the same scope.
(module (function_definition (function_name_fitness_vs) function_name_fitness_vs (parameters (identifier_self) identifier_self )parameters (block (expression_statement (string_"Median Fitness in the validation set") string_"Median Fitness in the validation set" )expression_statement (expression_statement (assignment (identifier_l) identifier_l (list_comprehension (attribute (identifier_x) identifier_x (identifier_fitness_vs) identifier_fitness_vs )attribute (for_in_clause (identifier_x) identifier_x (attribute (identifier_self) identifier_self (identifier_models) identifier_models )attribute )for_in_clause )list_comprehension )assignment )expression_statement (return_statement (call (attribute (identifier_np) identifier_np (identifier_median) identifier_median )attribute (argument_list (identifier_l) identifier_l )argument_list )call )return_statement )block )function_definition )module
Median Fitness in the validation set
(module (function_definition (function_name_cache) function_name_cache (parameters (identifier_self) identifier_self (default_parameter (identifier_refreshing) identifier_refreshing (None) None )default_parameter (default_parameter (identifier_next_action) identifier_next_action (None) None )default_parameter (default_parameter (identifier_data_blob) identifier_data_blob (None) None )default_parameter (default_parameter (identifier_json_last_refresh) identifier_json_last_refresh (None) None )default_parameter (default_parameter (identifier_rollback_point) identifier_rollback_point (False) False )default_parameter )parameters (block (expression_statement (call (attribute (identifier_LOGGER) identifier_LOGGER (identifier_debug) identifier_debug )attribute (argument_list (string_"InjectorComponentSkeleton.cache") string_"InjectorComponentSkeleton.cache" )argument_list )call )expression_statement (if_statement (comparison_operator (identifier_json_last_refresh) identifier_json_last_refresh (None) None )comparison_operator (block (expression_statement (assignment (identifier_json_last_refresh) identifier_json_last_refresh (call (attribute (attribute (identifier_datetime) identifier_datetime (identifier_datetime) identifier_datetime )attribute (identifier_now) identifier_now )attribute (argument_list )argument_list )call )assignment )expression_statement )block )if_statement (if_statement (identifier_rollback_point) identifier_rollback_point (block (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_rollback_point_refreshing) identifier_rollback_point_refreshing )attribute (identifier_refreshing) identifier_refreshing )assignment )expression_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_rollback_point_next_action) identifier_rollback_point_next_action )attribute (identifier_next_action) identifier_next_action )assignment )expression_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_rollback_point_data_blob) identifier_rollback_point_data_blob )attribute (identifier_data_blob) identifier_data_blob )assignment )expression_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_rollback_point_refreshing) identifier_rollback_point_refreshing )attribute (identifier_refreshing) identifier_refreshing )assignment )expression_statement )block )if_statement (return_statement (call (attribute (call (attribute (attribute (identifier_self) identifier_self (identifier_component_cache_actor) identifier_component_cache_actor )attribute (identifier_save) identifier_save )attribute (argument_list (keyword_argument (identifier_refreshing) identifier_refreshing (identifier_refreshing) identifier_refreshing )keyword_argument (keyword_argument (identifier_next_action) identifier_next_action (identifier_next_action) identifier_next_action )keyword_argument (keyword_argument (identifier_json_last_refresh) identifier_json_last_refresh (identifier_json_last_refresh) identifier_json_last_refresh )keyword_argument (keyword_argument (identifier_data_blob) identifier_data_blob (identifier_data_blob) identifier_data_blob )keyword_argument )argument_list )call (identifier_get) identifier_get )attribute (argument_list )argument_list )call )return_statement )block )function_definition )module
push this component into the cache :param refreshing: the new refreshing value :param next_action: the new next action value :param data_blob: the new data blob value :param json_last_refresh: the new json last refresh value - if None the date of this call :param rollback_point: define the rollback point with provided values (refreshing, next_action, data_blob and json_last_refresh) :return:
(module (function_definition (function_name_to_params) function_name_to_params (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_params) identifier_params (dictionary )dictionary )assignment )expression_statement (for_statement (identifier_name) identifier_name (attribute (identifier_self) identifier_self (identifier_PROPERTIES) identifier_PROPERTIES )attribute (block (expression_statement (assignment (identifier_attr) identifier_attr (call (attribute (string_'_{0}') string_'_{0}' (identifier_format) identifier_format )attribute (argument_list (identifier_name) identifier_name )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_value) identifier_value (boolean_operator (call (identifier_getattr) identifier_getattr (argument_list (identifier_self) identifier_self (identifier_attr) identifier_attr (None) None )argument_list )call (call (identifier_getattr) identifier_getattr (argument_list (identifier_self) identifier_self (identifier_name) identifier_name (None) None )argument_list )call )boolean_operator )assignment )expression_statement (if_statement (comparison_operator (identifier_value) identifier_value (None) None )comparison_operator (block (continue_statement )continue_statement )block )if_statement (if_statement (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_value) identifier_value (identifier_datetime) identifier_datetime )argument_list )call (block (expression_statement (assignment (subscript (identifier_params) identifier_params (identifier_name) identifier_name )subscript (call (identifier_format_time) identifier_format_time (argument_list (identifier_value) identifier_value )argument_list )call )assignment )expression_statement )block (elif_clause (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_value) identifier_value (identifier_list) identifier_list )argument_list )call (block (expression_statement (assignment (subscript (identifier_params) identifier_params (identifier_name) identifier_name )subscript (call (attribute (string_',') string_',' (identifier_join) identifier_join )attribute (argument_list (call (identifier_map) identifier_map (argument_list (identifier_str) identifier_str (identifier_value) identifier_value )argument_list )call )argument_list )call )assignment )expression_statement )block )elif_clause (elif_clause (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_value) identifier_value (identifier_bool) identifier_bool )argument_list )call (block (expression_statement (assignment (subscript (identifier_params) identifier_params (identifier_name) identifier_name )subscript (call (attribute (call (identifier_str) identifier_str (argument_list (identifier_value) identifier_value )argument_list )call (identifier_lower) identifier_lower )attribute (argument_list )argument_list )call )assignment )expression_statement )block )elif_clause (else_clause (block (expression_statement (assignment (subscript (identifier_params) identifier_params (identifier_name) identifier_name )subscript (identifier_value) identifier_value )assignment )expression_statement )block )else_clause )if_statement )block )for_statement (return_statement (identifier_params) identifier_params )return_statement )block )function_definition )module
Generates a Hash of property values for the current object. This helper handles all necessary type coercions as it generates its output.
(module (function_definition (function_name_ListGrrUsers) function_name_ListGrrUsers (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_args) identifier_args (call (attribute (identifier_user_management_pb2) identifier_user_management_pb2 (identifier_ApiListGrrUsersArgs) identifier_ApiListGrrUsersArgs )attribute (argument_list )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_items) identifier_items (call (attribute (attribute (identifier_self) identifier_self (identifier__context) identifier__context )attribute (identifier_SendIteratorRequest) identifier_SendIteratorRequest )attribute (argument_list (string_"ListGrrUsers") string_"ListGrrUsers" (identifier_args) identifier_args )argument_list )call )assignment )expression_statement (return_statement (call (attribute (identifier_utils) identifier_utils (identifier_MapItemsIterator) identifier_MapItemsIterator )attribute (argument_list (lambda (lambda_parameters (identifier_data) identifier_data )lambda_parameters (call (identifier_GrrUser) identifier_GrrUser (argument_list (keyword_argument (identifier_data) identifier_data (identifier_data) identifier_data )keyword_argument (keyword_argument (identifier_context) identifier_context (attribute (identifier_self) identifier_self (identifier__context) identifier__context )attribute )keyword_argument )argument_list )call )lambda (identifier_items) identifier_items )argument_list )call )return_statement )block )function_definition )module
Lists all registered GRR users.
(module (function_definition (function_name_stage_subset) function_name_stage_subset (parameters (identifier_self) identifier_self (typed_parameter (list_splat_pattern (identifier_files_to_add) identifier_files_to_add )list_splat_pattern (type (identifier_str) identifier_str )type )typed_parameter )parameters (block (expression_statement (call (attribute (identifier_LOGGER) identifier_LOGGER (identifier_info) identifier_info )attribute (argument_list (string_'staging files: %s') string_'staging files: %s' (identifier_files_to_add) identifier_files_to_add )argument_list )call )expression_statement (expression_statement (call (attribute (attribute (attribute (identifier_self) identifier_self (identifier_repo) identifier_repo )attribute (identifier_git) identifier_git )attribute (identifier_add) identifier_add )attribute (argument_list (list_splat (identifier_files_to_add) identifier_files_to_add )list_splat (keyword_argument (identifier_A) identifier_A (True) True )keyword_argument )argument_list )call )expression_statement )block )function_definition )module
Stages a subset of files :param files_to_add: files to stage :type files_to_add: str
(module (function_definition (function_name_setCurrentIndex) function_name_setCurrentIndex (parameters (identifier_self) identifier_self (identifier_index) identifier_index )parameters (block (if_statement (comparison_operator (attribute (identifier_self) identifier_self (identifier__currentIndex) identifier__currentIndex )attribute (identifier_index) identifier_index )comparison_operator (block (return_statement )return_statement )block )if_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier__currentIndex) identifier__currentIndex )attribute (identifier_index) identifier_index )assignment )expression_statement (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_currentIndexChanged) identifier_currentIndexChanged )attribute (identifier_emit) identifier_emit )attribute (argument_list (identifier_index) identifier_index )argument_list )call )expression_statement (for_statement (pattern_list (identifier_i) identifier_i (identifier_item) identifier_item )pattern_list (call (identifier_enumerate) identifier_enumerate (argument_list (call (attribute (identifier_self) identifier_self (identifier_items) identifier_items )attribute (argument_list )argument_list )call )argument_list )call (block (expression_statement (call (attribute (identifier_item) identifier_item (identifier_setMenuEnabled) identifier_setMenuEnabled )attribute (argument_list (comparison_operator (identifier_i) identifier_i (identifier_index) identifier_index )comparison_operator )argument_list )call )expression_statement )block )for_statement (expression_statement (call (attribute (identifier_self) identifier_self (identifier_repaint) identifier_repaint )attribute (argument_list )argument_list )call )expression_statement )block )function_definition )module
Sets the current item to the item at the inputed index. :param index | <int>
(module (function_definition (function_name_import_package) function_name_import_package (parameters (identifier_rel_path_to_package) identifier_rel_path_to_package (identifier_package_name) identifier_package_name )parameters (block (try_statement (block (expression_statement (assignment (identifier_curr_dir) identifier_curr_dir (call (attribute (attribute (identifier_os) identifier_os (identifier_path) identifier_path )attribute (identifier_dirname) identifier_dirname )attribute (argument_list (call (attribute (attribute (identifier_os) identifier_os (identifier_path) identifier_path )attribute (identifier_realpath) identifier_realpath )attribute (argument_list (identifier___file__) identifier___file__ )argument_list )call )argument_list )call )assignment )expression_statement )block (except_clause (identifier_NameError) identifier_NameError (block (expression_statement (assignment (identifier_curr_dir) identifier_curr_dir (call (attribute (attribute (identifier_os) identifier_os (identifier_path) identifier_path )attribute (identifier_dirname) identifier_dirname )attribute (argument_list (call (attribute (attribute (identifier_os) identifier_os (identifier_path) identifier_path )attribute (identifier_realpath) identifier_realpath )attribute (argument_list (call (attribute (identifier_os) identifier_os (identifier_getcwd) identifier_getcwd )attribute (argument_list )argument_list )call )argument_list )call )argument_list )call )assignment )expression_statement )block )except_clause )try_statement (expression_statement (assignment (identifier_package_path) identifier_package_path (call (attribute (attribute (identifier_os) identifier_os (identifier_path) identifier_path )attribute (identifier_join) identifier_join )attribute (argument_list (identifier_curr_dir) identifier_curr_dir (identifier_rel_path_to_package) identifier_rel_path_to_package )argument_list )call )assignment )expression_statement (if_statement (comparison_operator (identifier_package_path) identifier_package_path (attribute (identifier_sys) identifier_sys (identifier_path) identifier_path )attribute )comparison_operator (block (expression_statement (assignment (attribute (identifier_sys) identifier_sys (identifier_path) identifier_path )attribute (binary_operator (list (identifier_package_path) identifier_package_path )list (attribute (identifier_sys) identifier_sys (identifier_path) identifier_path )attribute )binary_operator )assignment )expression_statement )block )if_statement (expression_statement (assignment (identifier_package) identifier_package (call (identifier___import__) identifier___import__ (argument_list (identifier_package_name) identifier_package_name )argument_list )call )assignment )expression_statement (return_statement (identifier_package) identifier_package )return_statement )block )function_definition )module
Imports a python package into the current namespace. Parameters ---------- rel_path_to_package : str Path to the package containing director relative from this script's directory. package_name : str The name of the package to be imported. Returns --------- package : The imported package object.
(module (function_definition (function_name_profiles) function_name_profiles (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_raw_profiles) identifier_raw_profiles (subscript (call (attribute (call (attribute (call (attribute (call (attribute (attribute (attribute (identifier_self) identifier_self (identifier_account) identifier_account )attribute (identifier_service) identifier_service )attribute (identifier_management) identifier_management )attribute (argument_list )argument_list )call (identifier_profiles) identifier_profiles )attribute (argument_list )argument_list )call (identifier_list) identifier_list )attribute (argument_list (keyword_argument (identifier_accountId) identifier_accountId (attribute (attribute (identifier_self) identifier_self (identifier_account) identifier_account )attribute (identifier_id) identifier_id )attribute )keyword_argument (keyword_argument (identifier_webPropertyId) identifier_webPropertyId (attribute (identifier_self) identifier_self (identifier_id) identifier_id )attribute )keyword_argument )argument_list )call (identifier_execute) identifier_execute )attribute (argument_list )argument_list )call (string_'items') string_'items' )subscript )assignment )expression_statement (expression_statement (assignment (identifier_profiles) identifier_profiles (list_comprehension (call (identifier_Profile) identifier_Profile (argument_list (identifier_raw) identifier_raw (identifier_self) identifier_self )argument_list )call (for_in_clause (identifier_raw) identifier_raw (identifier_raw_profiles) identifier_raw_profiles )for_in_clause )list_comprehension )assignment )expression_statement (return_statement (call (attribute (identifier_addressable) identifier_addressable (identifier_List) identifier_List )attribute (argument_list (identifier_profiles) identifier_profiles (keyword_argument (identifier_indices) identifier_indices (list (string_'id') string_'id' (string_'name') string_'name' )list )keyword_argument (keyword_argument (identifier_insensitive) identifier_insensitive (True) True )keyword_argument )argument_list )call )return_statement )block )function_definition )module
A list of all profiles on this web property. You may select a specific profile using its name, its id or an index. ```python property.profiles[0] property.profiles['9234823'] property.profiles['marketing profile'] ```
(module (function_definition (function_name_get_max_events_in_both_arrays) function_name_get_max_events_in_both_arrays (parameters (identifier_events_one) identifier_events_one (identifier_events_two) identifier_events_two )parameters (block (expression_statement (assignment (identifier_events_one) identifier_events_one (call (attribute (identifier_np) identifier_np (identifier_ascontiguousarray) identifier_ascontiguousarray )attribute (argument_list (identifier_events_one) identifier_events_one )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_events_two) identifier_events_two (call (attribute (identifier_np) identifier_np (identifier_ascontiguousarray) identifier_ascontiguousarray )attribute (argument_list (identifier_events_two) identifier_events_two )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_event_result) identifier_event_result (call (attribute (identifier_np) identifier_np (identifier_empty) identifier_empty )attribute (argument_list (keyword_argument (identifier_shape) identifier_shape (tuple (binary_operator (subscript (attribute (identifier_events_one) identifier_events_one (identifier_shape) identifier_shape )attribute (integer_0) integer_0 )subscript (subscript (attribute (identifier_events_two) identifier_events_two (identifier_shape) identifier_shape )attribute (integer_0) integer_0 )subscript )binary_operator )tuple )keyword_argument (keyword_argument (identifier_dtype) identifier_dtype (attribute (identifier_events_one) identifier_events_one (identifier_dtype) identifier_dtype )attribute )keyword_argument )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_count) identifier_count (call (attribute (identifier_analysis_functions) identifier_analysis_functions (identifier_get_max_events_in_both_arrays) identifier_get_max_events_in_both_arrays )attribute (argument_list (identifier_events_one) identifier_events_one (identifier_events_two) identifier_events_two (identifier_event_result) identifier_event_result )argument_list )call )assignment )expression_statement (return_statement (subscript (identifier_event_result) identifier_event_result (slice (colon) colon (identifier_count) identifier_count )slice )subscript )return_statement )block )function_definition )module
Calculates the maximum count of events that exist in both arrays.
(module (function_definition (function_name_merge_all_cells) function_name_merge_all_cells (parameters (identifier_cells) identifier_cells )parameters (block (expression_statement (assignment (identifier_current) identifier_current (integer_0) integer_0 )assignment )expression_statement (while_statement (comparison_operator (call (identifier_len) identifier_len (argument_list (identifier_cells) identifier_cells )argument_list )call (integer_1) integer_1 )comparison_operator (block (expression_statement (assignment (identifier_count) identifier_count (integer_0) integer_0 )assignment )expression_statement (while_statement (comparison_operator (identifier_count) identifier_count (call (identifier_len) identifier_len (argument_list (identifier_cells) identifier_cells )argument_list )call )comparison_operator (block (expression_statement (assignment (identifier_cell1) identifier_cell1 (subscript (identifier_cells) identifier_cells (identifier_current) identifier_current )subscript )assignment )expression_statement (expression_statement (assignment (identifier_cell2) identifier_cell2 (subscript (identifier_cells) identifier_cells (identifier_count) identifier_count )subscript )assignment )expression_statement (expression_statement (assignment (identifier_merge_direction) identifier_merge_direction (call (identifier_get_merge_direction) identifier_get_merge_direction (argument_list (identifier_cell1) identifier_cell1 (identifier_cell2) identifier_cell2 )argument_list )call )assignment )expression_statement (if_statement (not_operator (comparison_operator (identifier_merge_direction) identifier_merge_direction (string_"NONE") string_"NONE" )comparison_operator )not_operator (block (expression_statement (call (identifier_merge_cells) identifier_merge_cells (argument_list (identifier_cell1) identifier_cell1 (identifier_cell2) identifier_cell2 (identifier_merge_direction) identifier_merge_direction )argument_list )call )expression_statement (if_statement (comparison_operator (identifier_current) identifier_current (identifier_count) identifier_count )comparison_operator (block (expression_statement (augmented_assignment (identifier_current) identifier_current (integer_1) integer_1 )augmented_assignment )expression_statement )block )if_statement (expression_statement (call (attribute (identifier_cells) identifier_cells (identifier_pop) identifier_pop )attribute (argument_list (identifier_count) identifier_count )argument_list )call )expression_statement )block (else_clause (block (expression_statement (augmented_assignment (identifier_count) identifier_count (integer_1) integer_1 )augmented_assignment )expression_statement )block )else_clause )if_statement )block )while_statement (expression_statement (augmented_assignment (identifier_current) identifier_current (integer_1) integer_1 )augmented_assignment )expression_statement (if_statement (comparison_operator (identifier_current) identifier_current (call (identifier_len) identifier_len (argument_list (identifier_cells) identifier_cells )argument_list )call )comparison_operator (block (expression_statement (assignment (identifier_current) identifier_current (integer_0) integer_0 )assignment )expression_statement )block )if_statement )block )while_statement (return_statement (attribute (subscript (identifier_cells) identifier_cells (integer_0) integer_0 )subscript (identifier_text) identifier_text )attribute )return_statement )block )function_definition )module
Loop through list of cells and piece them together one by one Parameters ---------- cells : list of dashtable.data2rst.Cell Returns ------- grid_table : str The final grid table
(module (function_definition (function_name_Disks) function_name_Disks (parameters (identifier_self) identifier_self )parameters (block (if_statement (not_operator (attribute (identifier_self) identifier_self (identifier_disks) identifier_disks )attribute )not_operator (block (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_disks) identifier_disks )attribute (call (attribute (attribute (identifier_clc) identifier_clc (identifier_v2) identifier_v2 )attribute (identifier_Disks) identifier_Disks )attribute (argument_list (keyword_argument (identifier_server) identifier_server (identifier_self) identifier_self )keyword_argument (keyword_argument (identifier_disks_lst) identifier_disks_lst (subscript (subscript (attribute (identifier_self) identifier_self (identifier_data) identifier_data )attribute (string_'details') string_'details' )subscript (string_'disks') string_'disks' )subscript )keyword_argument (keyword_argument (identifier_session) identifier_session (attribute (identifier_self) identifier_self (identifier_session) identifier_session )attribute )keyword_argument )argument_list )call )assignment )expression_statement )block )if_statement (return_statement (parenthesized_expression (attribute (identifier_self) identifier_self (identifier_disks) identifier_disks )attribute )parenthesized_expression )return_statement )block )function_definition )module
Return disks object associated with server. >>> clc.v2.Server("WA1BTDIX01").Disks() <clc.APIv2.disk.Disks object at 0x10feea190>
(module (function_definition (function_name_handle_initialize) function_name_handle_initialize (parameters (identifier_self) identifier_self (identifier_data) identifier_data )parameters (block (expression_statement (call (attribute (identifier_logger) identifier_logger (identifier_info) identifier_info )attribute (argument_list (string_'start to handle_initialize') string_'start to handle_initialize' )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_self) identifier_self (identifier_handle_update_search_space) identifier_handle_update_search_space )attribute (argument_list (identifier_data) identifier_data )argument_list )call )expression_statement (if_statement (attribute (identifier_self) identifier_self (identifier_search_space) identifier_search_space )attribute (block (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_cg) identifier_cg )attribute (call (identifier_CG_BOHB) identifier_CG_BOHB (argument_list (keyword_argument (identifier_configspace) identifier_configspace (attribute (identifier_self) identifier_self (identifier_search_space) identifier_search_space )attribute )keyword_argument (keyword_argument (identifier_min_points_in_model) identifier_min_points_in_model (attribute (identifier_self) identifier_self (identifier_min_points_in_model) identifier_min_points_in_model )attribute )keyword_argument (keyword_argument (identifier_top_n_percent) identifier_top_n_percent (attribute (identifier_self) identifier_self (identifier_top_n_percent) identifier_top_n_percent )attribute )keyword_argument (keyword_argument (identifier_num_samples) identifier_num_samples (attribute (identifier_self) identifier_self (identifier_num_samples) identifier_num_samples )attribute )keyword_argument (keyword_argument (identifier_random_fraction) identifier_random_fraction (attribute (identifier_self) identifier_self (identifier_random_fraction) identifier_random_fraction )attribute )keyword_argument (keyword_argument (identifier_bandwidth_factor) identifier_bandwidth_factor (attribute (identifier_self) identifier_self (identifier_bandwidth_factor) identifier_bandwidth_factor )attribute )keyword_argument (keyword_argument (identifier_min_bandwidth) identifier_min_bandwidth (attribute (identifier_self) identifier_self (identifier_min_bandwidth) identifier_min_bandwidth )attribute )keyword_argument )argument_list )call )assignment )expression_statement )block (else_clause (block (raise_statement (call (identifier_ValueError) identifier_ValueError (argument_list (string_'Error: Search space is None') string_'Error: Search space is None' )argument_list )call )raise_statement )block )else_clause )if_statement (expression_statement (call (attribute (identifier_self) identifier_self (identifier_generate_new_bracket) identifier_generate_new_bracket )attribute (argument_list )argument_list )call )expression_statement (expression_statement (call (identifier_send) identifier_send (argument_list (attribute (identifier_CommandType) identifier_CommandType (identifier_Initialized) identifier_Initialized )attribute (string_'') string_'' )argument_list )call )expression_statement )block )function_definition )module
Initialize Tuner, including creating Bayesian optimization-based parametric models and search space formations Parameters ---------- data: search space search space of this experiment Raises ------ ValueError Error: Search space is None
(module (function_definition (function_name_publish_proto_in_ipfs) function_name_publish_proto_in_ipfs (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_ipfs_hash_base58) identifier_ipfs_hash_base58 (call (attribute (identifier_utils_ipfs) identifier_utils_ipfs (identifier_publish_proto_in_ipfs) identifier_publish_proto_in_ipfs )attribute (argument_list (call (attribute (identifier_self) identifier_self (identifier__get_ipfs_client) identifier__get_ipfs_client )attribute (argument_list )argument_list )call (attribute (attribute (identifier_self) identifier_self (identifier_args) identifier_args )attribute (identifier_protodir) identifier_protodir )attribute )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (identifier_self) identifier_self (identifier__printout) identifier__printout )attribute (argument_list (identifier_ipfs_hash_base58) identifier_ipfs_hash_base58 )argument_list )call )expression_statement )block )function_definition )module
Publish proto files in ipfs and print hash
(module (function_definition (function_name_trt_pmf) function_name_trt_pmf (parameters (identifier_matrices) identifier_matrices )parameters (block (expression_statement (assignment (pattern_list (identifier_ntrts) identifier_ntrts (identifier_nmags) identifier_nmags (identifier_ndists) identifier_ndists (identifier_nlons) identifier_nlons (identifier_nlats) identifier_nlats (identifier_neps) identifier_neps )pattern_list (attribute (identifier_matrices) identifier_matrices (identifier_shape) identifier_shape )attribute )assignment )expression_statement (expression_statement (assignment (identifier_pmf) identifier_pmf (call (attribute (identifier_numpy) identifier_numpy (identifier_zeros) identifier_zeros )attribute (argument_list (identifier_ntrts) identifier_ntrts )argument_list )call )assignment )expression_statement (for_statement (identifier_t) identifier_t (call (identifier_range) identifier_range (argument_list (identifier_ntrts) identifier_ntrts )argument_list )call (block (expression_statement (assignment (subscript (identifier_pmf) identifier_pmf (identifier_t) identifier_t )subscript (binary_operator (float_1.) float_1. (call (attribute (identifier_numpy) identifier_numpy (identifier_prod) identifier_prod )attribute (argument_list (list_comprehension (binary_operator (float_1.) float_1. (subscript (identifier_matrices) identifier_matrices (identifier_t) identifier_t (identifier_i) identifier_i (identifier_j) identifier_j (identifier_k) identifier_k (identifier_l) identifier_l (identifier_m) identifier_m )subscript )binary_operator (for_in_clause (identifier_i) identifier_i (call (identifier_range) identifier_range (argument_list (identifier_nmags) identifier_nmags )argument_list )call )for_in_clause (for_in_clause (identifier_j) identifier_j (call (identifier_range) identifier_range (argument_list (identifier_ndists) identifier_ndists )argument_list )call )for_in_clause (for_in_clause (identifier_k) identifier_k (call (identifier_range) identifier_range (argument_list (identifier_nlons) identifier_nlons )argument_list )call )for_in_clause (for_in_clause (identifier_l) identifier_l (call (identifier_range) identifier_range (argument_list (identifier_nlats) identifier_nlats )argument_list )call )for_in_clause (for_in_clause (identifier_m) identifier_m (call (identifier_range) identifier_range (argument_list (identifier_neps) identifier_neps )argument_list )call )for_in_clause )list_comprehension )argument_list )call )binary_operator )assignment )expression_statement )block )for_statement (return_statement (identifier_pmf) identifier_pmf )return_statement )block )function_definition )module
Fold full disaggregation matrix to tectonic region type PMF. :param matrices: a matrix with T submatrices :returns: an array of T probabilities one per each tectonic region type
(module (function_definition (function_name_from_json) function_name_from_json (parameters (identifier_cls) identifier_cls (identifier_json) identifier_json )parameters (block (expression_statement (assignment (identifier_obj) identifier_obj (call (identifier_cls) identifier_cls (argument_list (call (attribute (attribute (identifier_key_range) identifier_key_range (identifier_KeyRange) identifier_KeyRange )attribute (identifier_from_json) identifier_from_json )attribute (argument_list (subscript (identifier_json) identifier_json (string_"key_range") string_"key_range" )subscript )argument_list )call (call (attribute (attribute (identifier_model) identifier_model (identifier_QuerySpec) identifier_QuerySpec )attribute (identifier_from_json) identifier_from_json )attribute (argument_list (subscript (identifier_json) identifier_json (string_"query_spec") string_"query_spec" )subscript )argument_list )call )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_cursor) identifier_cursor (subscript (identifier_json) identifier_json (string_"cursor") string_"cursor" )subscript )assignment )expression_statement (if_statement (boolean_operator (identifier_cursor) identifier_cursor (subscript (identifier_json) identifier_json (string_"cursor_object") string_"cursor_object" )subscript )boolean_operator (block (expression_statement (assignment (attribute (identifier_obj) identifier_obj (identifier__cursor) identifier__cursor )attribute (call (attribute (attribute (identifier_datastore_query) identifier_datastore_query (identifier_Cursor) identifier_Cursor )attribute (identifier_from_websafe_string) identifier_from_websafe_string )attribute (argument_list (identifier_cursor) identifier_cursor )argument_list )call )assignment )expression_statement )block (else_clause (block (expression_statement (assignment (attribute (identifier_obj) identifier_obj (identifier__cursor) identifier__cursor )attribute (identifier_cursor) identifier_cursor )assignment )expression_statement )block )else_clause )if_statement (return_statement (identifier_obj) identifier_obj )return_statement )block )function_definition )module
Reverse of to_json.
(module (function_definition (function_name_allReadGroups) function_name_allReadGroups (parameters (identifier_self) identifier_self )parameters (block (for_statement (identifier_dataset) identifier_dataset (call (attribute (identifier_self) identifier_self (identifier_getDatasets) identifier_getDatasets )attribute (argument_list )argument_list )call (block (for_statement (identifier_readGroupSet) identifier_readGroupSet (call (attribute (identifier_dataset) identifier_dataset (identifier_getReadGroupSets) identifier_getReadGroupSets )attribute (argument_list )argument_list )call (block (for_statement (identifier_readGroup) identifier_readGroup (call (attribute (identifier_readGroupSet) identifier_readGroupSet (identifier_getReadGroups) identifier_getReadGroups )attribute (argument_list )argument_list )call (block (expression_statement (yield (identifier_readGroup) identifier_readGroup )yield )expression_statement )block )for_statement )block )for_statement )block )for_statement )block )function_definition )module
Return an iterator over all read groups in the data repo
(module (function_definition (function_name_summary_pairwise_indices) function_name_summary_pairwise_indices (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_summary_pairwise_indices) identifier_summary_pairwise_indices (call (attribute (identifier_np) identifier_np (identifier_empty) identifier_empty )attribute (argument_list (subscript (attribute (attribute (subscript (attribute (identifier_self) identifier_self (identifier_values) identifier_values )attribute (integer_0) integer_0 )subscript (identifier_t_stats) identifier_t_stats )attribute (identifier_shape) identifier_shape )attribute (integer_1) integer_1 )subscript (keyword_argument (identifier_dtype) identifier_dtype (identifier_object) identifier_object )keyword_argument )argument_list )call )assignment )expression_statement (expression_statement (assignment (subscript (identifier_summary_pairwise_indices) identifier_summary_pairwise_indices (slice (colon) colon )slice )subscript (list_comprehension (attribute (identifier_sig) identifier_sig (identifier_summary_pairwise_indices) identifier_summary_pairwise_indices )attribute (for_in_clause (identifier_sig) identifier_sig (attribute (identifier_self) identifier_self (identifier_values) identifier_values )attribute )for_in_clause )list_comprehension )assignment )expression_statement (return_statement (identifier_summary_pairwise_indices) identifier_summary_pairwise_indices )return_statement )block )function_definition )module
ndarray containing tuples of pairwise indices for the column summary.
(module (function_definition (function_name_check_gcdt_update) function_name_check_gcdt_update (parameters )parameters (block (try_statement (block (expression_statement (assignment (pattern_list (identifier_inst_version) identifier_inst_version (identifier_latest_version) identifier_latest_version )pattern_list (call (identifier_get_package_versions) identifier_get_package_versions (argument_list (string_'gcdt') string_'gcdt' )argument_list )call )assignment )expression_statement (if_statement (comparison_operator (identifier_inst_version) identifier_inst_version (identifier_latest_version) identifier_latest_version )comparison_operator (block (expression_statement (call (attribute (identifier_log) identifier_log (identifier_warn) identifier_warn )attribute (argument_list (binary_operator (string_'Please consider an update to gcdt version: %s') string_'Please consider an update to gcdt version: %s' (identifier_latest_version) identifier_latest_version )binary_operator )argument_list )call )expression_statement )block )if_statement )block (except_clause (identifier_GracefulExit) identifier_GracefulExit (block (raise_statement )raise_statement )block )except_clause (except_clause (identifier_Exception) identifier_Exception (block (expression_statement (call (attribute (identifier_log) identifier_log (identifier_warn) identifier_warn )attribute (argument_list (string_'PyPi appears to be down - we currently can\'t check for newer gcdt versions') string_'PyPi appears to be down - we currently can\'t check for newer gcdt versions' )argument_list )call )expression_statement )block )except_clause )try_statement )block )function_definition )module
Check whether a newer gcdt is available and output a warning.