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(module (function_definition (function_name_mbar_objective_and_gradient) function_name_mbar_objective_and_gradient (parameters (identifier_u_kn) identifier_u_kn (identifier_N_k) identifier_N_k (identifier_f_k) identifier_f_k )parameters (block (expression_statement (assignment (pattern_list (identifier_u_kn) identifier_u_kn (identifier_N_k) identifier_N_k (identifier_f_k) identifier_f_k )pattern_list (call (identifier_validate_inputs) identifier_validate_inputs (argument_list (identifier_u_kn) identifier_u_kn (identifier_N_k) identifier_N_k (identifier_f_k) identifier_f_k )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_log_denominator_n) identifier_log_denominator_n (call (identifier_logsumexp) identifier_logsumexp (argument_list (binary_operator (identifier_f_k) identifier_f_k (attribute (identifier_u_kn) identifier_u_kn (identifier_T) identifier_T )attribute )binary_operator (keyword_argument (identifier_b) identifier_b (identifier_N_k) identifier_N_k )keyword_argument (keyword_argument (identifier_axis) identifier_axis (integer_1) integer_1 )keyword_argument )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_log_numerator_k) identifier_log_numerator_k (call (identifier_logsumexp) identifier_logsumexp (argument_list (binary_operator (unary_operator (identifier_log_denominator_n) identifier_log_denominator_n )unary_operator (identifier_u_kn) identifier_u_kn )binary_operator (keyword_argument (identifier_axis) identifier_axis (integer_1) integer_1 )keyword_argument )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_grad) identifier_grad (binary_operator (binary_operator (unary_operator (integer_1) integer_1 )unary_operator (identifier_N_k) identifier_N_k )binary_operator (parenthesized_expression (binary_operator (float_1.0) float_1.0 (call (attribute (identifier_np) identifier_np (identifier_exp) identifier_exp )attribute (argument_list (binary_operator (identifier_f_k) identifier_f_k (identifier_log_numerator_k) identifier_log_numerator_k )binary_operator )argument_list )call )binary_operator )parenthesized_expression )binary_operator )assignment )expression_statement (expression_statement (assignment (identifier_obj) identifier_obj (binary_operator (call (attribute (identifier_math) identifier_math (identifier_fsum) identifier_fsum )attribute (argument_list (identifier_log_denominator_n) identifier_log_denominator_n )argument_list )call (call (attribute (identifier_N_k) identifier_N_k (identifier_dot) identifier_dot )attribute (argument_list (identifier_f_k) identifier_f_k )argument_list )call )binary_operator )assignment )expression_statement (return_statement (expression_list (identifier_obj) identifier_obj (identifier_grad) identifier_grad )expression_list )return_statement )block )function_definition )module
Calculates both objective function and gradient for MBAR. Parameters ---------- u_kn : np.ndarray, shape=(n_states, n_samples), dtype='float' The reduced potential energies, i.e. -log unnormalized probabilities N_k : np.ndarray, shape=(n_states), dtype='int' The number of samples in each state f_k : np.ndarray, shape=(n_states), dtype='float' The reduced free energies of each state Returns ------- obj : float Objective function grad : np.ndarray, dtype=float, shape=(n_states) Gradient of objective function Notes ----- This objective function is essentially a doubly-summed partition function and is quite sensitive to precision loss from both overflow and underflow. For optimal results, u_kn can be preconditioned by subtracting out a `n` dependent vector. More optimal precision, the objective function uses math.fsum for the outermost sum and logsumexp for the inner sum. The gradient is equation C6 in the JCP MBAR paper; the objective function is its integral.
(module (function_definition (function_name_path) function_name_path (parameters (identifier_self) identifier_self (list_splat_pattern (identifier_names) identifier_names )list_splat_pattern )parameters (block (expression_statement (assignment (identifier_path) identifier_path (list (identifier_self) identifier_self )list )assignment )expression_statement (for_statement (identifier_name) identifier_name (identifier_names) identifier_names (block (expression_statement (call (attribute (identifier_path) identifier_path (identifier_append) identifier_append )attribute (argument_list (subscript (subscript (identifier_path) identifier_path (unary_operator (integer_1) integer_1 )unary_operator )subscript (identifier_name) identifier_name )subscript )argument_list )call )expression_statement )block )for_statement (return_statement (subscript (identifier_path) identifier_path (slice (integer_1) integer_1 (colon) colon )slice )subscript )return_statement )block )function_definition )module
Look up and return the complete path of an atom. For example, atoms.path('moov', 'udta', 'meta') will return a list of three atoms, corresponding to the moov, udta, and meta atoms.
(module (function_definition (function_name_status) function_name_status (parameters (identifier_self) identifier_self (identifier_agreement_id) identifier_agreement_id )parameters (block (expression_statement (assignment (identifier_condition_ids) identifier_condition_ids (attribute (call (attribute (attribute (attribute (identifier_self) identifier_self (identifier__keeper) identifier__keeper )attribute (identifier_agreement_manager) identifier_agreement_manager )attribute (identifier_get_agreement) identifier_get_agreement )attribute (argument_list (identifier_agreement_id) identifier_agreement_id )argument_list )call (identifier_condition_ids) identifier_condition_ids )attribute )assignment )expression_statement (expression_statement (assignment (identifier_result) identifier_result (dictionary (pair (string_"agreementId") string_"agreementId" (identifier_agreement_id) identifier_agreement_id )pair )dictionary )assignment )expression_statement (expression_statement (assignment (identifier_conditions) identifier_conditions (call (identifier_dict) identifier_dict (argument_list )argument_list )call )assignment )expression_statement (for_statement (identifier_i) identifier_i (identifier_condition_ids) identifier_condition_ids (block (expression_statement (assignment (subscript (identifier_conditions) identifier_conditions (call (attribute (attribute (identifier_self) identifier_self (identifier__keeper) identifier__keeper )attribute (identifier_get_condition_name_by_address) identifier_get_condition_name_by_address )attribute (argument_list (attribute (call (attribute (attribute (attribute (identifier_self) identifier_self (identifier__keeper) identifier__keeper )attribute (identifier_condition_manager) identifier_condition_manager )attribute (identifier_get_condition) identifier_get_condition )attribute (argument_list (identifier_i) identifier_i )argument_list )call (identifier_type_ref) identifier_type_ref )attribute )argument_list )call )subscript (call (attribute (attribute (attribute (identifier_self) identifier_self (identifier__keeper) identifier__keeper )attribute (identifier_condition_manager) identifier_condition_manager )attribute (identifier_get_condition_state) identifier_get_condition_state )attribute (argument_list (identifier_i) identifier_i )argument_list )call )assignment )expression_statement )block )for_statement (expression_statement (assignment (subscript (identifier_result) identifier_result (string_"conditions") string_"conditions" )subscript (identifier_conditions) identifier_conditions )assignment )expression_statement (return_statement (identifier_result) identifier_result )return_statement )block )function_definition )module
Get the status of a service agreement. :param agreement_id: id of the agreement, hex str :return: dict with condition status of each of the agreement's conditions or None if the agreement is invalid.
(module (function_definition (function_name_get_ip_address) function_name_get_ip_address (parameters (identifier_ifname) identifier_ifname )parameters (block (expression_statement (assignment (identifier_s) identifier_s (call (attribute (identifier_socket) identifier_socket (identifier_socket) identifier_socket )attribute (argument_list (attribute (identifier_socket) identifier_socket (identifier_AF_INET) identifier_AF_INET )attribute (attribute (identifier_socket) identifier_socket (identifier_SOCK_DGRAM) identifier_SOCK_DGRAM )attribute )argument_list )call )assignment )expression_statement (return_statement (call (attribute (identifier_socket) identifier_socket (identifier_inet_ntoa) identifier_inet_ntoa )attribute (argument_list (subscript (call (attribute (identifier_fcntl) identifier_fcntl (identifier_ioctl) identifier_ioctl )attribute (argument_list (call (attribute (identifier_s) identifier_s (identifier_fileno) identifier_fileno )attribute (argument_list )argument_list )call (integer_0x8915) integer_0x8915 (call (attribute (identifier_struct) identifier_struct (identifier_pack) identifier_pack )attribute (argument_list (string_'256s') string_'256s' (subscript (identifier_ifname) identifier_ifname (slice (colon) colon (integer_15) integer_15 )slice )subscript )argument_list )call )argument_list )call (slice (integer_20) integer_20 (colon) colon (integer_24) integer_24 )slice )subscript )argument_list )call )return_statement )block )function_definition )module
Hack to get IP address from the interface
(module (function_definition (function_name_make_iterable) function_name_make_iterable (parameters (identifier_value) identifier_value )parameters (block (if_statement (comparison_operator (attribute (identifier_sys) identifier_sys (identifier_version_info) identifier_version_info )attribute (tuple (integer_3) integer_3 (integer_0) integer_0 )tuple )comparison_operator (block (if_statement (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_value) identifier_value (identifier_unicode) identifier_unicode )argument_list )call (block (expression_statement (assignment (identifier_value) identifier_value (call (identifier_str) identifier_str (argument_list (identifier_value) identifier_value )argument_list )call )assignment )expression_statement )block )if_statement )block )if_statement (if_statement (boolean_operator (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_value) identifier_value (identifier_str) identifier_str )argument_list )call (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_value) identifier_value (identifier_dict) identifier_dict )argument_list )call )boolean_operator (block (expression_statement (assignment (identifier_value) identifier_value (list (identifier_value) identifier_value )list )assignment )expression_statement )block )if_statement (if_statement (not_operator (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_value) identifier_value (attribute (identifier_collections) identifier_collections (identifier_Iterable) identifier_Iterable )attribute )argument_list )call )not_operator (block (raise_statement (call (identifier_TypeError) identifier_TypeError (argument_list (string_'value must be an iterable object') string_'value must be an iterable object' )argument_list )call )raise_statement )block )if_statement (return_statement (identifier_value) identifier_value )return_statement )block )function_definition )module
Converts the supplied value to a list object This function will inspect the supplied value and return an iterable in the form of a list. Args: value (object): An valid Python object Returns: An iterable object of type list
(module (function_definition (function_name_hash_tags) function_name_hash_tags (parameters (identifier_text) identifier_text (identifier_hashes) identifier_hashes )parameters (block (function_definition (function_name_sub) function_name_sub (parameters (identifier_match) identifier_match )parameters (block (expression_statement (assignment (identifier_hashed) identifier_hashed (call (identifier_hash_text) identifier_hash_text (argument_list (call (attribute (identifier_match) identifier_match (identifier_group) identifier_group )attribute (argument_list (integer_0) integer_0 )argument_list )call (string_'tag') string_'tag' )argument_list )call )assignment )expression_statement (expression_statement (assignment (subscript (identifier_hashes) identifier_hashes (identifier_hashed) identifier_hashed )subscript (call (attribute (identifier_match) identifier_match (identifier_group) identifier_group )attribute (argument_list (integer_0) integer_0 )argument_list )call )assignment )expression_statement (return_statement (identifier_hashed) identifier_hashed )return_statement )block )function_definition (return_statement (call (attribute (identifier_re_tag) identifier_re_tag (identifier_sub) identifier_sub )attribute (argument_list (identifier_sub) identifier_sub (identifier_text) identifier_text )argument_list )call )return_statement )block )function_definition )module
Hashes any non-block tags. Only the tags themselves are hashed -- the contains surrounded by tags are not touched. Indeed, there is no notion of "contained" text for non-block tags. Inline tags that are to be hashed are not white-listed, which allows users to define their own tags. These user-defined tags will also be preserved in their original form until the controller (see link.py) is applied to them.
(module (function_definition (function_name__load_secret) function_name__load_secret (parameters (identifier_self) identifier_self (identifier_creds_file) identifier_creds_file )parameters (block (try_statement (block (with_statement (with_clause (with_item (as_pattern (call (identifier_open) identifier_open (argument_list (identifier_creds_file) identifier_creds_file )argument_list )call (as_pattern_target (identifier_fp) identifier_fp )as_pattern_target )as_pattern )with_item )with_clause (block (expression_statement (assignment (identifier_creds) identifier_creds (call (attribute (identifier_json) identifier_json (identifier_load) identifier_load )attribute (argument_list (identifier_fp) identifier_fp )argument_list )call )assignment )expression_statement )block )with_statement (return_statement (identifier_creds) identifier_creds )return_statement )block (except_clause (as_pattern (identifier_Exception) identifier_Exception (as_pattern_target (identifier_e) identifier_e )as_pattern_target )as_pattern (block (expression_statement (call (attribute (attribute (identifier_sys) identifier_sys (identifier_stderr) identifier_stderr )attribute (identifier_write) identifier_write )attribute (argument_list (call (attribute (string_"Error loading oauth secret from local file called '{0}'\n") string_"Error loading oauth secret from local file called '{0}'\n" (identifier_format) identifier_format )attribute (argument_list (identifier_creds_file) identifier_creds_file )argument_list )call )argument_list )call )expression_statement (expression_statement (call (attribute (attribute (identifier_sys) identifier_sys (identifier_stderr) identifier_stderr )attribute (identifier_write) identifier_write )attribute (argument_list (string_"\tThere should be a local OAuth credentials file \n") string_"\tThere should be a local OAuth credentials file \n" )argument_list )call )expression_statement (expression_statement (call (attribute (attribute (identifier_sys) identifier_sys (identifier_stderr) identifier_stderr )attribute (identifier_write) identifier_write )attribute (argument_list (string_"\twhich has contents like this:\n") string_"\twhich has contents like this:\n" )argument_list )call )expression_statement (expression_statement (call (attribute (attribute (identifier_sys) identifier_sys (identifier_stderr) identifier_stderr )attribute (identifier_write) identifier_write )attribute (argument_list )argument_list )call )expression_statement (expression_statement (call (attribute (attribute (identifier_sys) identifier_sys (identifier_stderr) identifier_stderr )attribute (identifier_write) identifier_write )attribute (argument_list (string_"\n") string_"\n" )argument_list )call )expression_statement (raise_statement (identifier_e) identifier_e )raise_statement )block )except_clause )try_statement )block )function_definition )module
read the oauth secrets and account ID from a credentials configuration file
(module (function_definition (function_name_prepare) function_name_prepare (parameters (identifier_self) identifier_self (identifier_params) identifier_params )parameters (block (expression_statement (assignment (identifier_jsonparams) identifier_jsonparams (call (attribute (identifier_json) identifier_json (identifier_dumps) identifier_dumps )attribute (argument_list (identifier_params) identifier_params )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_payload) identifier_payload (call (attribute (identifier_base64) identifier_base64 (identifier_b64encode) identifier_b64encode )attribute (argument_list (call (attribute (identifier_jsonparams) identifier_jsonparams (identifier_encode) identifier_encode )attribute (argument_list )argument_list )call )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_signature) identifier_signature (call (attribute (call (attribute (identifier_hmac) identifier_hmac (identifier_new) identifier_new )attribute (argument_list (call (attribute (attribute (identifier_self) identifier_self (identifier_secret_key) identifier_secret_key )attribute (identifier_encode) identifier_encode )attribute (argument_list )argument_list )call (identifier_payload) identifier_payload (attribute (identifier_hashlib) identifier_hashlib (identifier_sha384) identifier_sha384 )attribute )argument_list )call (identifier_hexdigest) identifier_hexdigest )attribute (argument_list )argument_list )call )assignment )expression_statement (return_statement (dictionary (pair (string_'X-GEMINI-APIKEY') string_'X-GEMINI-APIKEY' (attribute (identifier_self) identifier_self (identifier_api_key) identifier_api_key )attribute )pair (pair (string_'X-GEMINI-PAYLOAD') string_'X-GEMINI-PAYLOAD' (identifier_payload) identifier_payload )pair (pair (string_'X-GEMINI-SIGNATURE') string_'X-GEMINI-SIGNATURE' (identifier_signature) identifier_signature )pair )dictionary )return_statement )block )function_definition )module
Prepare, return the required HTTP headers. Base 64 encode the parameters, sign it with the secret key, create the HTTP headers, return the whole payload. Arguments: params -- a dictionary of parameters
(module (function_definition (function_name_default_settings) function_name_default_settings (parameters (identifier_params) identifier_params )parameters (block (function_definition (function_name__default_settings) function_name__default_settings (parameters (identifier_fn) identifier_fn (identifier_command) identifier_command )parameters (block (for_statement (pattern_list (identifier_k) identifier_k (identifier_w) identifier_w )pattern_list (call (attribute (identifier_params) identifier_params (identifier_items) identifier_items )attribute (argument_list )argument_list )call (block (expression_statement (call (attribute (identifier_settings) identifier_settings (identifier_setdefault) identifier_setdefault )attribute (argument_list (identifier_k) identifier_k (identifier_w) identifier_w )argument_list )call )expression_statement )block )for_statement (return_statement (call (identifier_fn) identifier_fn (argument_list (identifier_command) identifier_command )argument_list )call )return_statement )block )function_definition (return_statement (call (identifier_decorator) identifier_decorator (argument_list (identifier__default_settings) identifier__default_settings )argument_list )call )return_statement )block )function_definition )module
Adds default values to settings if it not presented. Usage: @default_settings({'apt': '/usr/bin/apt'}) def match(command): print(settings.apt)
(module (function_definition (function_name_fric) function_name_fric (parameters (identifier_FlowRate) identifier_FlowRate (identifier_Diam) identifier_Diam (identifier_Nu) identifier_Nu (identifier_PipeRough) identifier_PipeRough )parameters (block (expression_statement (call (attribute (identifier_ut) identifier_ut (identifier_check_range) identifier_check_range )attribute (argument_list (list (identifier_PipeRough) identifier_PipeRough (string_"0-1") string_"0-1" (string_"Pipe roughness") string_"Pipe roughness" )list )argument_list )call )expression_statement (if_statement (comparison_operator (call (identifier_re_pipe) identifier_re_pipe (argument_list (identifier_FlowRate) identifier_FlowRate (identifier_Diam) identifier_Diam (identifier_Nu) identifier_Nu )argument_list )call (identifier_RE_TRANSITION_PIPE) identifier_RE_TRANSITION_PIPE )comparison_operator (block (expression_statement (assignment (identifier_f) identifier_f (parenthesized_expression (binary_operator (float_0.25) float_0.25 (binary_operator (parenthesized_expression (call (attribute (identifier_np) identifier_np (identifier_log10) identifier_log10 )attribute (argument_list (binary_operator (binary_operator (identifier_PipeRough) identifier_PipeRough (parenthesized_expression (binary_operator (float_3.7) float_3.7 (identifier_Diam) identifier_Diam )binary_operator )parenthesized_expression )binary_operator (binary_operator (float_5.74) float_5.74 (binary_operator (call (identifier_re_pipe) identifier_re_pipe (argument_list (identifier_FlowRate) identifier_FlowRate (identifier_Diam) identifier_Diam (identifier_Nu) identifier_Nu )argument_list )call (float_0.9) float_0.9 )binary_operator )binary_operator )binary_operator )argument_list )call )parenthesized_expression (integer_2) integer_2 )binary_operator )binary_operator )parenthesized_expression )assignment )expression_statement )block (else_clause (block (expression_statement (assignment (identifier_f) identifier_f (binary_operator (integer_64) integer_64 (call (identifier_re_pipe) identifier_re_pipe (argument_list (identifier_FlowRate) identifier_FlowRate (identifier_Diam) identifier_Diam (identifier_Nu) identifier_Nu )argument_list )call )binary_operator )assignment )expression_statement )block )else_clause )if_statement (return_statement (identifier_f) identifier_f )return_statement )block )function_definition )module
Return the friction factor for pipe flow. This equation applies to both laminar and turbulent flows.
(module (function_definition (function_name_plot_target) function_name_plot_target (parameters (identifier_target) identifier_target (identifier_ax) identifier_ax )parameters (block (expression_statement (call (attribute (identifier_ax) identifier_ax (identifier_scatter) identifier_scatter )attribute (argument_list (subscript (identifier_target) identifier_target (integer_0) integer_0 )subscript (subscript (identifier_target) identifier_target (integer_1) integer_1 )subscript (subscript (identifier_target) identifier_target (integer_2) integer_2 )subscript (keyword_argument (identifier_c) identifier_c (string_"red") string_"red" )keyword_argument (keyword_argument (identifier_s) identifier_s (integer_80) integer_80 )keyword_argument )argument_list )call )expression_statement )block )function_definition )module
Ajoute la target au plot
(module (function_definition (function_name__MakeMethodDescriptor) function_name__MakeMethodDescriptor (parameters (identifier_self) identifier_self (identifier_method_proto) identifier_method_proto (identifier_service_name) identifier_service_name (identifier_package) identifier_package (identifier_scope) identifier_scope (identifier_index) identifier_index )parameters (block (expression_statement (assignment (identifier_full_name) identifier_full_name (call (attribute (string_'.') string_'.' (identifier_join) identifier_join )attribute (argument_list (tuple (identifier_service_name) identifier_service_name (attribute (identifier_method_proto) identifier_method_proto (identifier_name) identifier_name )attribute )tuple )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_input_type) identifier_input_type (call (attribute (identifier_self) identifier_self (identifier__GetTypeFromScope) identifier__GetTypeFromScope )attribute (argument_list (identifier_package) identifier_package (attribute (identifier_method_proto) identifier_method_proto (identifier_input_type) identifier_input_type )attribute (identifier_scope) identifier_scope )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_output_type) identifier_output_type (call (attribute (identifier_self) identifier_self (identifier__GetTypeFromScope) identifier__GetTypeFromScope )attribute (argument_list (identifier_package) identifier_package (attribute (identifier_method_proto) identifier_method_proto (identifier_output_type) identifier_output_type )attribute (identifier_scope) identifier_scope )argument_list )call )assignment )expression_statement (return_statement (call (attribute (identifier_descriptor) identifier_descriptor (identifier_MethodDescriptor) identifier_MethodDescriptor )attribute (argument_list (keyword_argument (identifier_name) identifier_name (attribute (identifier_method_proto) identifier_method_proto (identifier_name) identifier_name )attribute )keyword_argument (keyword_argument (identifier_full_name) identifier_full_name (identifier_full_name) identifier_full_name )keyword_argument (keyword_argument (identifier_index) identifier_index (identifier_index) identifier_index )keyword_argument (keyword_argument (identifier_containing_service) identifier_containing_service (None) None )keyword_argument (keyword_argument (identifier_input_type) identifier_input_type (identifier_input_type) identifier_input_type )keyword_argument (keyword_argument (identifier_output_type) identifier_output_type (identifier_output_type) identifier_output_type )keyword_argument (keyword_argument (identifier_options) identifier_options (call (identifier__OptionsOrNone) identifier__OptionsOrNone (argument_list (identifier_method_proto) identifier_method_proto )argument_list )call )keyword_argument )argument_list )call )return_statement )block )function_definition )module
Creates a method descriptor from a MethodDescriptorProto. Args: method_proto: The proto describing the method. service_name: The name of the containing service. package: Optional package name to look up for types. scope: Scope containing available types. index: Index of the method in the service. Returns: An initialized MethodDescriptor object.
(module (function_definition (function_name_clear_candidates) function_name_clear_candidates (parameters (identifier_self) identifier_self (default_parameter (identifier_clear_env) identifier_clear_env (True) True )default_parameter )parameters (block (function_definition (function_name_slave_task) function_name_slave_task (parameters (identifier_addr) identifier_addr )parameters (block (expression_statement (assignment (identifier_r_manager) identifier_r_manager (await (call (attribute (attribute (identifier_self) identifier_self (identifier_env) identifier_env )attribute (identifier_connect) identifier_connect )attribute (argument_list (identifier_addr) identifier_addr )argument_list )call )await )assignment )expression_statement (return_statement (await (call (attribute (identifier_r_manager) identifier_r_manager (identifier_clear_candidates) identifier_clear_candidates )attribute (argument_list )argument_list )call )await )return_statement )block )function_definition (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier__candidates) identifier__candidates )attribute (list )list )assignment )expression_statement (if_statement (identifier_clear_env) identifier_clear_env (block (if_statement (attribute (identifier_self) identifier_self (identifier__single_env) identifier__single_env )attribute (block (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_env) identifier_env )attribute (identifier_clear_candidates) identifier_clear_candidates )attribute (argument_list )argument_list )call )expression_statement )block (else_clause (block (expression_statement (assignment (identifier_mgrs) identifier_mgrs (call (attribute (identifier_self) identifier_self (identifier_get_managers) identifier_get_managers )attribute (argument_list )argument_list )call )assignment )expression_statement (expression_statement (call (identifier_run) identifier_run (argument_list (call (identifier_create_tasks) identifier_create_tasks (argument_list (identifier_slave_task) identifier_slave_task (identifier_mgrs) identifier_mgrs )argument_list )call )argument_list )call )expression_statement )block )else_clause )if_statement )block )if_statement )block )function_definition )module
Clear the current candidates. :param bool clear_env: If ``True``, clears also environment's (or its underlying slave environments') candidates.
(module (function_definition (function_name_page_not_found) function_name_page_not_found (parameters (identifier_request) identifier_request (default_parameter (identifier_template_name) identifier_template_name (string_'404.html') string_'404.html' )default_parameter )parameters (block (expression_statement (assignment (identifier_response) identifier_response (call (identifier_render_in_page) identifier_render_in_page (argument_list (identifier_request) identifier_request (identifier_template_name) identifier_template_name )argument_list )call )assignment )expression_statement (if_statement (identifier_response) identifier_response (block (return_statement (identifier_response) identifier_response )return_statement )block )if_statement (expression_statement (assignment (identifier_template) identifier_template (call (identifier_Template) identifier_Template (argument_list (concatenated_string (string_'<h1>Not Found</h1>') string_'<h1>Not Found</h1>' (string_'<p>The requested URL {{ request_path }} was not found on this server.</p>') string_'<p>The requested URL {{ request_path }} was not found on this server.</p>' )concatenated_string )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_body) identifier_body (call (attribute (identifier_template) identifier_template (identifier_render) identifier_render )attribute (argument_list (call (identifier_RequestContext) identifier_RequestContext (argument_list (identifier_request) identifier_request (dictionary (pair (string_'request_path') string_'request_path' (attribute (identifier_request) identifier_request (identifier_path) identifier_path )attribute )pair )dictionary )argument_list )call )argument_list )call )assignment )expression_statement (return_statement (call (attribute (identifier_http) identifier_http (identifier_HttpResponseNotFound) identifier_HttpResponseNotFound )attribute (argument_list (identifier_body) identifier_body (keyword_argument (identifier_content_type) identifier_content_type (identifier_CONTENT_TYPE) identifier_CONTENT_TYPE )keyword_argument )argument_list )call )return_statement )block )function_definition )module
Default 404 handler. Templates: :template:`404.html` Context: request_path The path of the requested URL (e.g., '/app/pages/bad_page/')
(module (function_definition (function_name_landsat_c1_toa_cloud_mask) function_name_landsat_c1_toa_cloud_mask (parameters (identifier_input_img) identifier_input_img (default_parameter (identifier_snow_flag) identifier_snow_flag (False) False )default_parameter (default_parameter (identifier_cirrus_flag) identifier_cirrus_flag (False) False )default_parameter (default_parameter (identifier_cloud_confidence) identifier_cloud_confidence (integer_2) integer_2 )default_parameter (default_parameter (identifier_shadow_confidence) identifier_shadow_confidence (integer_3) integer_3 )default_parameter (default_parameter (identifier_snow_confidence) identifier_snow_confidence (integer_3) integer_3 )default_parameter (default_parameter (identifier_cirrus_confidence) identifier_cirrus_confidence (integer_3) integer_3 )default_parameter )parameters (block (expression_statement (assignment (identifier_qa_img) identifier_qa_img (call (attribute (identifier_input_img) identifier_input_img (identifier_select) identifier_select )attribute (argument_list (list (string_'BQA') string_'BQA' )list )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_cloud_mask) identifier_cloud_mask (call (attribute (call (attribute (call (attribute (call (attribute (call (attribute (identifier_qa_img) identifier_qa_img (identifier_rightShift) identifier_rightShift )attribute (argument_list (integer_4) integer_4 )argument_list )call (identifier_bitwiseAnd) identifier_bitwiseAnd )attribute (argument_list (integer_1) integer_1 )argument_list )call (identifier_neq) identifier_neq )attribute (argument_list (integer_0) integer_0 )argument_list )call (line_continuation_\) line_continuation_\ (identifier_And) identifier_And )attribute (argument_list (call (attribute (call (attribute (call (attribute (identifier_qa_img) identifier_qa_img (identifier_rightShift) identifier_rightShift )attribute (argument_list (integer_5) integer_5 )argument_list )call (identifier_bitwiseAnd) identifier_bitwiseAnd )attribute (argument_list (integer_3) integer_3 )argument_list )call (identifier_gte) identifier_gte )attribute (argument_list (identifier_cloud_confidence) identifier_cloud_confidence )argument_list )call )argument_list )call (line_continuation_\) line_continuation_\ (identifier_Or) identifier_Or )attribute (argument_list (call (attribute (call (attribute (call (attribute (identifier_qa_img) identifier_qa_img (identifier_rightShift) identifier_rightShift )attribute (argument_list (integer_7) integer_7 )argument_list )call (identifier_bitwiseAnd) identifier_bitwiseAnd )attribute (argument_list (integer_3) integer_3 )argument_list )call (identifier_gte) identifier_gte )attribute (argument_list (identifier_shadow_confidence) identifier_shadow_confidence )argument_list )call )argument_list )call )assignment )expression_statement (if_statement (identifier_snow_flag) identifier_snow_flag (block (expression_statement (assignment (identifier_cloud_mask) identifier_cloud_mask (call (attribute (identifier_cloud_mask) identifier_cloud_mask (identifier_Or) identifier_Or )attribute (argument_list (call (attribute (call (attribute (call (attribute (identifier_qa_img) identifier_qa_img (identifier_rightShift) identifier_rightShift )attribute (argument_list (integer_9) integer_9 )argument_list )call (identifier_bitwiseAnd) identifier_bitwiseAnd )attribute (argument_list (integer_3) integer_3 )argument_list )call (identifier_gte) identifier_gte )attribute (argument_list (identifier_snow_confidence) identifier_snow_confidence )argument_list )call )argument_list )call )assignment )expression_statement )block )if_statement (if_statement (identifier_cirrus_flag) identifier_cirrus_flag (block (expression_statement (assignment (identifier_cloud_mask) identifier_cloud_mask (call (attribute (identifier_cloud_mask) identifier_cloud_mask (identifier_Or) identifier_Or )attribute (argument_list (call (attribute (call (attribute (call (attribute (identifier_qa_img) identifier_qa_img (identifier_rightShift) identifier_rightShift )attribute (argument_list (integer_11) integer_11 )argument_list )call (identifier_bitwiseAnd) identifier_bitwiseAnd )attribute (argument_list (integer_3) integer_3 )argument_list )call (identifier_gte) identifier_gte )attribute (argument_list (identifier_cirrus_confidence) identifier_cirrus_confidence )argument_list )call )argument_list )call )assignment )expression_statement )block )if_statement (return_statement (call (attribute (identifier_cloud_mask) identifier_cloud_mask (identifier_Not) identifier_Not )attribute (argument_list )argument_list )call )return_statement )block )function_definition )module
Extract cloud mask from the Landsat Collection 1 TOA BQA band Parameters ---------- input_img : ee.Image Image from a Landsat Collection 1 TOA collection with a BQA band (e.g. LANDSAT/LE07/C01/T1_TOA). snow_flag : bool If true, mask snow pixels (the default is False). cirrus_flag : bool If true, mask cirrus pixels (the default is False). Note, cirrus bits are only set for Landsat 8 (OLI) images. cloud_confidence : int Minimum cloud confidence value (the default is 2). shadow_confidence : int Minimum cloud confidence value (the default is 3). snow_confidence : int Minimum snow confidence value (the default is 3). Only used if snow_flag is True. cirrus_confidence : int Minimum cirrus confidence value (the default is 3). Only used if cirrus_flag is True. Returns ------- ee.Image Notes ----- Output image is structured to be applied directly with updateMask() i.e. 0 is cloud, 1 is cloud free Assuming Cloud must be set to check Cloud Confidence Bits 0: Designated Fill 1: Terrain Occlusion (OLI) / Dropped Pixel (TM, ETM+) 2-3: Radiometric Saturation 4: Cloud 5-6: Cloud Confidence 7-8: Cloud Shadow Confidence 9-10: Snow/Ice Confidence 11-12: Cirrus Confidence (Landsat 8 only) Confidence values 00: "Not Determined", algorithm did not determine the status of this condition 01: "No", algorithm has low to no confidence that this condition exists (0-33 percent confidence) 10: "Maybe", algorithm has medium confidence that this condition exists (34-66 percent confidence) 11: "Yes", algorithm has high confidence that this condition exists (67-100 percent confidence) References ---------- https://landsat.usgs.gov/collectionqualityband
(module (function_definition (function_name_check_read_permission) function_name_check_read_permission (parameters (identifier_self) identifier_self (identifier_user_id) identifier_user_id (default_parameter (identifier_do_raise) identifier_do_raise (True) True )default_parameter )parameters (block (if_statement (call (identifier__is_admin) identifier__is_admin (argument_list (identifier_user_id) identifier_user_id )argument_list )call (block (return_statement (True) True )return_statement )block )if_statement (if_statement (comparison_operator (call (identifier_int) identifier_int (argument_list (attribute (identifier_self) identifier_self (identifier_created_by) identifier_created_by )attribute )argument_list )call (call (identifier_int) identifier_int (argument_list (identifier_user_id) identifier_user_id )argument_list )call )comparison_operator (block (return_statement (True) True )return_statement )block )if_statement (for_statement (identifier_owner) identifier_owner (attribute (identifier_self) identifier_self (identifier_owners) identifier_owners )attribute (block (if_statement (comparison_operator (call (identifier_int) identifier_int (argument_list (attribute (identifier_owner) identifier_owner (identifier_user_id) identifier_user_id )attribute )argument_list )call (call (identifier_int) identifier_int (argument_list (identifier_user_id) identifier_user_id )argument_list )call )comparison_operator (block (if_statement (comparison_operator (attribute (identifier_owner) identifier_owner (identifier_view) identifier_view )attribute (string_'Y') string_'Y' )comparison_operator (block (break_statement )break_statement )block )if_statement )block )if_statement )block (else_clause (block (if_statement (comparison_operator (identifier_do_raise) identifier_do_raise (True) True )comparison_operator (block (raise_statement (call (identifier_PermissionError) identifier_PermissionError (argument_list (binary_operator (concatenated_string (string_"Permission denied. User %s does not have read") string_"Permission denied. User %s does not have read" (string_" access on network %s") string_" access on network %s" )concatenated_string (tuple (identifier_user_id) identifier_user_id (attribute (identifier_self) identifier_self (identifier_id) identifier_id )attribute )tuple )binary_operator )argument_list )call )raise_statement )block (else_clause (block (return_statement (False) False )return_statement )block )else_clause )if_statement )block )else_clause )for_statement (return_statement (True) True )return_statement )block )function_definition )module
Check whether this user can read this network
(module (function_definition (function_name_get_leads) function_name_get_leads (parameters (identifier_self) identifier_self (list_splat_pattern (identifier_guids) identifier_guids )list_splat_pattern (dictionary_splat_pattern (identifier_options) identifier_options )dictionary_splat_pattern )parameters (block (expression_statement (assignment (identifier_original_options) identifier_original_options (identifier_options) identifier_options )assignment )expression_statement (expression_statement (assignment (identifier_options) identifier_options (call (attribute (identifier_self) identifier_self (identifier_camelcase_search_options) identifier_camelcase_search_options )attribute (argument_list (call (attribute (identifier_options) identifier_options (identifier_copy) identifier_copy )attribute (argument_list )argument_list )call )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_params) identifier_params (dictionary )dictionary )assignment )expression_statement (for_statement (identifier_i) identifier_i (call (identifier_xrange) identifier_xrange (argument_list (call (identifier_len) identifier_len (argument_list (identifier_guids) identifier_guids )argument_list )call )argument_list )call (block (expression_statement (assignment (subscript (identifier_params) identifier_params (binary_operator (string_'guids[%s]') string_'guids[%s]' (identifier_i) identifier_i )binary_operator )subscript (subscript (identifier_guids) identifier_guids (identifier_i) identifier_i )subscript )assignment )expression_statement )block )for_statement (for_statement (identifier_k) identifier_k (call (attribute (identifier_options) identifier_options (identifier_keys) identifier_keys )attribute (argument_list )argument_list )call (block (if_statement (comparison_operator (identifier_k) identifier_k (identifier_SEARCH_OPTIONS) identifier_SEARCH_OPTIONS )comparison_operator (block (expression_statement (assignment (subscript (identifier_params) identifier_params (identifier_k) identifier_k )subscript (subscript (identifier_options) identifier_options (identifier_k) identifier_k )subscript )assignment )expression_statement (delete_statement (subscript (identifier_options) identifier_options (identifier_k) identifier_k )subscript )delete_statement )block )if_statement )block )for_statement (expression_statement (assignment (identifier_leads) identifier_leads (call (attribute (identifier_self) identifier_self (identifier__call) identifier__call )attribute (argument_list (string_'list/') string_'list/' (identifier_params) identifier_params (dictionary_splat (identifier_options) identifier_options )dictionary_splat )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_log) identifier_log )attribute (identifier_info) identifier_info )attribute (argument_list (binary_operator (string_"retrieved %s leads through API ( %soptions=%s )") string_"retrieved %s leads through API ( %soptions=%s )" (tuple (call (identifier_len) identifier_len (argument_list (identifier_leads) identifier_leads )argument_list )call (boolean_operator (boolean_operator (identifier_guids) identifier_guids (binary_operator (string_'guids=%s, ') string_'guids=%s, ' (identifier_guids) identifier_guids )binary_operator )boolean_operator (string_'') string_'' )boolean_operator (identifier_original_options) identifier_original_options )tuple )binary_operator )argument_list )call )expression_statement (return_statement (identifier_leads) identifier_leads )return_statement )block )function_definition )module
Supports all the search parameters in the API as well as python underscored variants
(module (function_definition (function_name_geturl) function_name_geturl (parameters (identifier_self) identifier_self )parameters (block (if_statement (boolean_operator (comparison_operator (attribute (identifier_self) identifier_self (identifier_retries) identifier_retries )attribute (None) None )comparison_operator (call (identifier_len) identifier_len (argument_list (attribute (attribute (identifier_self) identifier_self (identifier_retries) identifier_retries )attribute (identifier_history) identifier_history )attribute )argument_list )call )boolean_operator (block (return_statement (attribute (subscript (attribute (attribute (identifier_self) identifier_self (identifier_retries) identifier_retries )attribute (identifier_history) identifier_history )attribute (unary_operator (integer_1) integer_1 )unary_operator )subscript (identifier_redirect_location) identifier_redirect_location )attribute )return_statement )block (else_clause (block (return_statement (attribute (identifier_self) identifier_self (identifier__request_url) identifier__request_url )attribute )return_statement )block )else_clause )if_statement )block )function_definition )module
Returns the URL that was the source of this response. If the request that generated this response redirected, this method will return the final redirect location.
(module (function_definition (function_name_clone_and_merge_sub) function_name_clone_and_merge_sub (parameters (identifier_self) identifier_self (identifier_key) identifier_key )parameters (block (expression_statement (assignment (identifier_new_comp) identifier_new_comp (call (attribute (identifier_copy) identifier_copy (identifier_deepcopy) identifier_deepcopy )attribute (argument_list (identifier_self) identifier_self )argument_list )call )assignment )expression_statement (expression_statement (assignment (attribute (identifier_new_comp) identifier_new_comp (identifier_components) identifier_components )attribute (None) None )assignment )expression_statement (expression_statement (assignment (attribute (identifier_new_comp) identifier_new_comp (identifier_comp_key) identifier_comp_key )attribute (identifier_key) identifier_key )assignment )expression_statement (return_statement (identifier_new_comp) identifier_new_comp )return_statement )block )function_definition )module
Clones self and merges clone with sub-component specific information Parameters ---------- key : str Key specifying which sub-component Returns `ModelComponentInfo` object
(module (function_definition (function_name_out_degree) function_name_out_degree (parameters (identifier_self) identifier_self (default_parameter (identifier_nbunch) identifier_nbunch (None) None )default_parameter (default_parameter (identifier_t) identifier_t (None) None )default_parameter )parameters (block (if_statement (comparison_operator (identifier_nbunch) identifier_nbunch (identifier_self) identifier_self )comparison_operator (block (return_statement (subscript (call (identifier_next) identifier_next (argument_list (call (attribute (identifier_self) identifier_self (identifier_out_degree_iter) identifier_out_degree_iter )attribute (argument_list (identifier_nbunch) identifier_nbunch (identifier_t) identifier_t )argument_list )call )argument_list )call (integer_1) integer_1 )subscript )return_statement )block (else_clause (block (return_statement (call (identifier_dict) identifier_dict (argument_list (call (attribute (identifier_self) identifier_self (identifier_out_degree_iter) identifier_out_degree_iter )attribute (argument_list (identifier_nbunch) identifier_nbunch (identifier_t) identifier_t )argument_list )call )argument_list )call )return_statement )block )else_clause )if_statement )block )function_definition )module
Return the out degree of a node or nodes at time t. The node degree is the number of interaction outgoing from that node in a given time frame. Parameters ---------- nbunch : iterable container, optional (default=all nodes) A container of nodes. The container will be iterated through once. t : snapshot id (default=None) If None will be returned the degree of nodes on the flattened graph. Returns ------- nd : dictionary, or number A dictionary with nodes as keys and degree as values or a number if a single node is specified. Examples -------- >>> G = dn.DynDiGraph() >>> G.add_interactions(0,1, t=0) >>> G.add_interactions(1,2, t=0) >>> G.add_interactions(2,3, t=0) >>> G.out_degree(0, t=0) 1 >>> G.out_degree([0,1], t=1) {0: 0, 1: 0} >>> list(G.out_degree([0,1], t=0).values()) [1, 2]
(module (function_definition (function_name_stripArgs) function_name_stripArgs (parameters (identifier_args) identifier_args (identifier_blacklist) identifier_blacklist )parameters (block (expression_statement (assignment (identifier_blacklist) identifier_blacklist (list_comprehension (call (attribute (identifier_b) identifier_b (identifier_lower) identifier_lower )attribute (argument_list )argument_list )call (for_in_clause (identifier_b) identifier_b (identifier_blacklist) identifier_blacklist )for_in_clause )list_comprehension )assignment )expression_statement (return_statement (call (identifier_list) identifier_list (argument_list (list_comprehension (identifier_arg) identifier_arg (for_in_clause (identifier_arg) identifier_arg (identifier_args) identifier_args )for_in_clause (if_clause (comparison_operator (call (attribute (identifier_arg) identifier_arg (identifier_lower) identifier_lower )attribute (argument_list )argument_list )call (identifier_blacklist) identifier_blacklist )comparison_operator )if_clause )list_comprehension )argument_list )call )return_statement )block )function_definition )module
Removes any arguments in the supplied list that are contained in the specified blacklist
(module (function_definition (function_name_role_required) function_name_role_required (parameters (default_parameter (identifier_role_name) identifier_role_name (None) None )default_parameter )parameters (block (function_definition (function_name__role_required) function_name__role_required (parameters (identifier_http_method_handler) identifier_http_method_handler )parameters (block (decorated_definition (decorator (call (identifier_wraps) identifier_wraps (argument_list (identifier_http_method_handler) identifier_http_method_handler )argument_list )call )decorator (function_definition (function_name_secure_http_method_handler) function_name_secure_http_method_handler (parameters (identifier_self) identifier_self (list_splat_pattern (identifier_args) identifier_args )list_splat_pattern (dictionary_splat_pattern (identifier_kwargs) identifier_kwargs )dictionary_splat_pattern )parameters (block (if_statement (comparison_operator (identifier_role_name) identifier_role_name (None) None )comparison_operator (block (expression_statement (assignment (identifier__message) identifier__message (string_"Role name must be provided") string_"Role name must be provided" )assignment )expression_statement (expression_statement (assignment (identifier_authorization_error) identifier_authorization_error (call (attribute (attribute (identifier_prestans) identifier_prestans (identifier_exception) identifier_exception )attribute (identifier_AuthorizationError) identifier_AuthorizationError )attribute (argument_list (identifier__message) identifier__message )argument_list )call )assignment )expression_statement (expression_statement (assignment (attribute (identifier_authorization_error) identifier_authorization_error (identifier_request) identifier_request )attribute (attribute (identifier_self) identifier_self (identifier_request) identifier_request )attribute )assignment )expression_statement (raise_statement (identifier_authorization_error) identifier_authorization_error )raise_statement )block )if_statement (if_statement (not_operator (attribute (attribute (identifier_self) identifier_self (identifier___provider_config__) identifier___provider_config__ )attribute (identifier_authentication) identifier_authentication )attribute )not_operator (block (expression_statement (assignment (identifier__message) identifier__message (string_"Service available to authenticated users only, no auth context provider set in handler") string_"Service available to authenticated users only, no auth context provider set in handler" )assignment )expression_statement (expression_statement (assignment (identifier_authentication_error) identifier_authentication_error (call (attribute (attribute (identifier_prestans) identifier_prestans (identifier_exception) identifier_exception )attribute (identifier_AuthenticationError) identifier_AuthenticationError )attribute (argument_list (identifier__message) identifier__message )argument_list )call )assignment )expression_statement (expression_statement (assignment (attribute (identifier_authentication_error) identifier_authentication_error (identifier_request) identifier_request )attribute (attribute (identifier_self) identifier_self (identifier_request) identifier_request )attribute )assignment )expression_statement (raise_statement (identifier_authentication_error) identifier_authentication_error )raise_statement )block )if_statement (if_statement (not_operator (call (attribute (attribute (attribute (identifier_self) identifier_self (identifier___provider_config__) identifier___provider_config__ )attribute (identifier_authentication) identifier_authentication )attribute (identifier_current_user_has_role) identifier_current_user_has_role )attribute (argument_list (identifier_role_name) identifier_role_name )argument_list )call )not_operator (block (expression_statement (assignment (identifier_authorization_error) identifier_authorization_error (call (attribute (attribute (identifier_prestans) identifier_prestans (identifier_exception) identifier_exception )attribute (identifier_AuthorizationError) identifier_AuthorizationError )attribute (argument_list (identifier_role_name) identifier_role_name )argument_list )call )assignment )expression_statement (expression_statement (assignment (attribute (identifier_authorization_error) identifier_authorization_error (identifier_request) identifier_request )attribute (attribute (identifier_self) identifier_self (identifier_request) identifier_request )attribute )assignment )expression_statement (raise_statement (identifier_authorization_error) identifier_authorization_error )raise_statement )block )if_statement (expression_statement (call (identifier_http_method_handler) identifier_http_method_handler (argument_list (identifier_self) identifier_self (list_splat (identifier_args) identifier_args )list_splat (dictionary_splat (identifier_kwargs) identifier_kwargs )dictionary_splat )argument_list )call )expression_statement )block )function_definition )decorated_definition (return_statement (call (call (identifier_wraps) identifier_wraps (argument_list (identifier_http_method_handler) identifier_http_method_handler )argument_list )call (argument_list (identifier_secure_http_method_handler) identifier_secure_http_method_handler )argument_list )call )return_statement )block )function_definition (return_statement (identifier__role_required) identifier__role_required )return_statement )block )function_definition )module
Authenticates a HTTP method handler based on a provided role With a little help from Peter Cole's Blog http://mrcoles.com/blog/3-decorator-examples-and-awesome-python/
(module (function_definition (function_name_run_hook) function_name_run_hook (parameters (identifier_hook_name) identifier_hook_name (identifier_project_dir) identifier_project_dir (identifier_context) identifier_context )parameters (block (expression_statement (assignment (identifier_script) identifier_script (call (identifier_find_hook) identifier_find_hook (argument_list (identifier_hook_name) identifier_hook_name )argument_list )call )assignment )expression_statement (if_statement (comparison_operator (identifier_script) identifier_script (None) None )comparison_operator (block (expression_statement (call (attribute (identifier_logger) identifier_logger (identifier_debug) identifier_debug )attribute (argument_list (call (attribute (string_'No {} hook found') string_'No {} hook found' (identifier_format) identifier_format )attribute (argument_list (identifier_hook_name) identifier_hook_name )argument_list )call )argument_list )call )expression_statement (return_statement )return_statement )block )if_statement (expression_statement (call (attribute (identifier_logger) identifier_logger (identifier_debug) identifier_debug )attribute (argument_list (call (attribute (string_'Running hook {}') string_'Running hook {}' (identifier_format) identifier_format )attribute (argument_list (identifier_hook_name) identifier_hook_name )argument_list )call )argument_list )call )expression_statement (expression_statement (call (identifier_run_script_with_context) identifier_run_script_with_context (argument_list (identifier_script) identifier_script (identifier_project_dir) identifier_project_dir (identifier_context) identifier_context )argument_list )call )expression_statement )block )function_definition )module
Try to find and execute a hook from the specified project directory. :param hook_name: The hook to execute. :param project_dir: The directory to execute the script from. :param context: Cookiecutter project context.
(module (function_definition (function_name_bqsr_table) function_name_bqsr_table (parameters (identifier_data) identifier_data )parameters (block (expression_statement (assignment (identifier_in_file) identifier_in_file (call (attribute (identifier_dd) identifier_dd (identifier_get_align_bam) identifier_get_align_bam )attribute (argument_list (identifier_data) identifier_data )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_out_file) identifier_out_file (binary_operator (string_"%s-recal-table.txt") string_"%s-recal-table.txt" (subscript (call (attribute (identifier_utils) identifier_utils (identifier_splitext_plus) identifier_splitext_plus )attribute (argument_list (identifier_in_file) identifier_in_file )argument_list )call (integer_0) integer_0 )subscript )binary_operator )assignment )expression_statement (if_statement (not_operator (call (attribute (identifier_utils) identifier_utils (identifier_file_uptodate) identifier_file_uptodate )attribute (argument_list (identifier_out_file) identifier_out_file (identifier_in_file) identifier_in_file )argument_list )call )not_operator (block (with_statement (with_clause (with_item (as_pattern (call (identifier_file_transaction) identifier_file_transaction (argument_list (identifier_data) identifier_data (identifier_out_file) identifier_out_file )argument_list )call (as_pattern_target (identifier_tx_out_file) identifier_tx_out_file )as_pattern_target )as_pattern )with_item )with_clause (block (expression_statement (assignment (identifier_assoc_files) identifier_assoc_files (call (attribute (identifier_dd) identifier_dd (identifier_get_variation_resources) identifier_get_variation_resources )attribute (argument_list (identifier_data) identifier_data )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_known) identifier_known (conditional_expression (binary_operator (string_"-k %s") string_"-k %s" (parenthesized_expression (call (attribute (identifier_assoc_files) identifier_assoc_files (identifier_get) identifier_get )attribute (argument_list (string_"dbsnp") string_"dbsnp" )argument_list )call )parenthesized_expression )binary_operator (comparison_operator (string_"dbsnp") string_"dbsnp" (identifier_assoc_files) identifier_assoc_files )comparison_operator (string_"") string_"" )conditional_expression )assignment )expression_statement (expression_statement (assignment (identifier_license) identifier_license (call (identifier_license_export) identifier_license_export (argument_list (identifier_data) identifier_data )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_cores) identifier_cores (call (attribute (identifier_dd) identifier_dd (identifier_get_num_cores) identifier_get_num_cores )attribute (argument_list (identifier_data) identifier_data )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_ref_file) identifier_ref_file (call (attribute (identifier_dd) identifier_dd (identifier_get_ref_file) identifier_get_ref_file )attribute (argument_list (identifier_data) identifier_data )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_cmd) identifier_cmd (parenthesized_expression (concatenated_string (string_"{license}sentieon driver -t {cores} -r {ref_file} ") string_"{license}sentieon driver -t {cores} -r {ref_file} " (string_"-i {in_file} --algo QualCal {known} {tx_out_file}") string_"-i {in_file} --algo QualCal {known} {tx_out_file}" )concatenated_string )parenthesized_expression )assignment )expression_statement (expression_statement (call (attribute (identifier_do) identifier_do (identifier_run) identifier_run )attribute (argument_list (call (attribute (identifier_cmd) identifier_cmd (identifier_format) identifier_format )attribute (argument_list (dictionary_splat (call (identifier_locals) identifier_locals (argument_list )argument_list )call )dictionary_splat )argument_list )call (string_"Sentieon QualCal generate table") string_"Sentieon QualCal generate table" )argument_list )call )expression_statement )block )with_statement )block )if_statement (return_statement (identifier_out_file) identifier_out_file )return_statement )block )function_definition )module
Generate recalibration tables as inputs to BQSR.
(module (function_definition (function_name_get_user) function_name_get_user (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_query) identifier_query (assignment (identifier_data) identifier_data (subscript (subscript (call (attribute (identifier_self) identifier_self (identifier_raw_query) identifier_raw_query )attribute (argument_list (identifier_query) identifier_query (keyword_argument (identifier_authorization) identifier_authorization (True) True )keyword_argument )argument_list )call (string_'data') string_'data' )subscript (string_'user') string_'user' )subscript )assignment )assignment )expression_statement (expression_statement (call (attribute (identifier_utils) identifier_utils (identifier_replace) identifier_replace )attribute (argument_list (identifier_data) identifier_data (string_"insertedAt") string_"insertedAt" (attribute (identifier_utils) identifier_utils (identifier_parse_datetime_string) identifier_parse_datetime_string )attribute )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_utils) identifier_utils (identifier_replace) identifier_replace )attribute (argument_list (identifier_data) identifier_data (string_"availableUsd") string_"availableUsd" (attribute (identifier_utils) identifier_utils (identifier_parse_float_string) identifier_parse_float_string )attribute )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_utils) identifier_utils (identifier_replace) identifier_replace )attribute (argument_list (identifier_data) identifier_data (string_"availableNmr") string_"availableNmr" (attribute (identifier_utils) identifier_utils (identifier_parse_float_string) identifier_parse_float_string )attribute )argument_list )call )expression_statement (return_statement (identifier_data) identifier_data )return_statement )block )function_definition )module
Get all information about you! Returns: dict: user information including the following fields: * assignedEthAddress (`str`) * availableNmr (`decimal.Decimal`) * availableUsd (`decimal.Decimal`) * banned (`bool`) * email (`str`) * id (`str`) * insertedAt (`datetime`) * mfaEnabled (`bool`) * status (`str`) * username (`str`) * country (`str) * phoneNumber (`str`) * apiTokens (`list`) each with the following fields: * name (`str`) * public_id (`str`) * scopes (`list of str`) Example: >>> api = NumerAPI(secret_key="..", public_id="..") >>> api.get_user() {'apiTokens': [ {'name': 'tokenname', 'public_id': 'BLABLA', 'scopes': ['upload_submission', 'stake', ..] }, ..], 'assignedEthAddress': '0x0000000000000000000000000001', 'availableNmr': Decimal('99.01'), 'availableUsd': Decimal('9.47'), 'banned': False, 'email': 'username@example.com', 'phoneNumber': '0123456', 'country': 'US', 'id': '1234-ABC..', 'insertedAt': datetime.datetime(2018, 1, 1, 2, 16, 48), 'mfaEnabled': False, 'status': 'VERIFIED', 'username': 'cool username' }
(module (function_definition (function_name_get_igraph_from_adjacency) function_name_get_igraph_from_adjacency (parameters (identifier_adjacency) identifier_adjacency (default_parameter (identifier_directed) identifier_directed (None) None )default_parameter )parameters (block (import_statement (aliased_import (dotted_name (identifier_igraph) identifier_igraph )dotted_name (identifier_ig) identifier_ig )aliased_import )import_statement (expression_statement (assignment (pattern_list (identifier_sources) identifier_sources (identifier_targets) identifier_targets )pattern_list (call (attribute (identifier_adjacency) identifier_adjacency (identifier_nonzero) identifier_nonzero )attribute (argument_list )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_weights) identifier_weights (subscript (identifier_adjacency) identifier_adjacency (identifier_sources) identifier_sources (identifier_targets) identifier_targets )subscript )assignment )expression_statement (if_statement (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_weights) identifier_weights (attribute (identifier_np) identifier_np (identifier_matrix) identifier_matrix )attribute )argument_list )call (block (expression_statement (assignment (identifier_weights) identifier_weights (attribute (identifier_weights) identifier_weights (identifier_A1) identifier_A1 )attribute )assignment )expression_statement )block )if_statement (expression_statement (assignment (identifier_g) identifier_g (call (attribute (identifier_ig) identifier_ig (identifier_Graph) identifier_Graph )attribute (argument_list (keyword_argument (identifier_directed) identifier_directed (identifier_directed) identifier_directed )keyword_argument )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (identifier_g) identifier_g (identifier_add_vertices) identifier_add_vertices )attribute (argument_list (subscript (attribute (identifier_adjacency) identifier_adjacency (identifier_shape) identifier_shape )attribute (integer_0) integer_0 )subscript )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_g) identifier_g (identifier_add_edges) identifier_add_edges )attribute (argument_list (call (identifier_list) identifier_list (argument_list (call (identifier_zip) identifier_zip (argument_list (identifier_sources) identifier_sources (identifier_targets) identifier_targets )argument_list )call )argument_list )call )argument_list )call )expression_statement (try_statement (block (expression_statement (assignment (subscript (attribute (identifier_g) identifier_g (identifier_es) identifier_es )attribute (string_'weight') string_'weight' )subscript (identifier_weights) identifier_weights )assignment )expression_statement )block (except_clause (block (pass_statement )pass_statement )block )except_clause )try_statement (if_statement (comparison_operator (call (attribute (identifier_g) identifier_g (identifier_vcount) identifier_vcount )attribute (argument_list )argument_list )call (subscript (attribute (identifier_adjacency) identifier_adjacency (identifier_shape) identifier_shape )attribute (integer_0) integer_0 )subscript )comparison_operator (block (expression_statement (call (attribute (identifier_logg) identifier_logg (identifier_warn) identifier_warn )attribute (argument_list (call (attribute (concatenated_string (string_'The constructed graph has only {} nodes. ') string_'The constructed graph has only {} nodes. ' (string_'Your adjacency matrix contained redundant nodes.') string_'Your adjacency matrix contained redundant nodes.' )concatenated_string (identifier_format) identifier_format )attribute (argument_list (call (attribute (identifier_g) identifier_g (identifier_vcount) identifier_vcount )attribute (argument_list )argument_list )call )argument_list )call )argument_list )call )expression_statement )block )if_statement (return_statement (identifier_g) identifier_g )return_statement )block )function_definition )module
Get igraph graph from adjacency matrix.
(module (function_definition (function_name__resize) function_name__resize (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_lines) identifier_lines (call (attribute (attribute (identifier_self) identifier_self (identifier_text) identifier_text )attribute (identifier_split) identifier_split )attribute (argument_list (string_'\n') string_'\n' )argument_list )call )assignment )expression_statement (expression_statement (assignment (pattern_list (identifier_xsize) identifier_xsize (identifier_ysize) identifier_ysize )pattern_list (expression_list (integer_0) integer_0 (integer_0) integer_0 )expression_list )assignment )expression_statement (for_statement (identifier_line) identifier_line (identifier_lines) identifier_lines (block (expression_statement (assignment (identifier_size) identifier_size (call (attribute (attribute (identifier_self) identifier_self (identifier_textctrl) identifier_textctrl )attribute (identifier_GetTextExtent) identifier_GetTextExtent )attribute (argument_list (identifier_line) identifier_line )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_xsize) identifier_xsize (call (identifier_max) identifier_max (argument_list (identifier_xsize) identifier_xsize (subscript (identifier_size) identifier_size (integer_0) integer_0 )subscript )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_ysize) identifier_ysize (binary_operator (identifier_ysize) identifier_ysize (subscript (identifier_size) identifier_size (integer_1) integer_1 )subscript )binary_operator )assignment )expression_statement )block )for_statement (expression_statement (assignment (identifier_xsize) identifier_xsize (call (identifier_int) identifier_int (argument_list (binary_operator (identifier_xsize) identifier_xsize (float_1.2) float_1.2 )binary_operator )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_textctrl) identifier_textctrl )attribute (identifier_SetSize) identifier_SetSize )attribute (argument_list (tuple (identifier_xsize) identifier_xsize (identifier_ysize) identifier_ysize )tuple )argument_list )call )expression_statement (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_textctrl) identifier_textctrl )attribute (identifier_SetMinSize) identifier_SetMinSize )attribute (argument_list (tuple (identifier_xsize) identifier_xsize (identifier_ysize) identifier_ysize )tuple )argument_list )call )expression_statement )block )function_definition )module
calculate and set text size, handling multi-line
(module (function_definition (function_name_fetch_meta_by_name) function_name_fetch_meta_by_name (parameters (identifier_name) identifier_name (default_parameter (identifier_filter_context) identifier_filter_context (None) None )default_parameter (default_parameter (identifier_exact_match) identifier_exact_match (True) True )default_parameter )parameters (block (expression_statement (assignment (identifier_result) identifier_result (call (attribute (call (identifier_SMCRequest) identifier_SMCRequest (argument_list (keyword_argument (identifier_params) identifier_params (dictionary (pair (string_'filter') string_'filter' (identifier_name) identifier_name )pair (pair (string_'filter_context') string_'filter_context' (identifier_filter_context) identifier_filter_context )pair (pair (string_'exact_match') string_'exact_match' (identifier_exact_match) identifier_exact_match )pair )dictionary )keyword_argument )argument_list )call (identifier_read) identifier_read )attribute (argument_list )argument_list )call )assignment )expression_statement (if_statement (not_operator (attribute (identifier_result) identifier_result (identifier_json) identifier_json )attribute )not_operator (block (expression_statement (assignment (attribute (identifier_result) identifier_result (identifier_json) identifier_json )attribute (list )list )assignment )expression_statement )block )if_statement (return_statement (identifier_result) identifier_result )return_statement )block )function_definition )module
Find the element based on name and optional filters. By default, the name provided uses the standard filter query. Additional filters can be used based on supported collections in the SMC API. :method: GET :param str name: element name, can use * as wildcard :param str filter_context: further filter request, i.e. 'host', 'group', 'single_fw', 'network_elements', 'services', 'services_and_applications' :param bool exact_match: Do an exact match by name, note this still can return multiple entries :rtype: SMCResult
(module (function_definition (function_name_asynchronous) function_name_asynchronous (parameters (identifier_self) identifier_self (identifier_fun) identifier_fun (identifier_low) identifier_low (default_parameter (identifier_user) identifier_user (string_'UNKNOWN') string_'UNKNOWN' )default_parameter (default_parameter (identifier_pub) identifier_pub (None) None )default_parameter )parameters (block (expression_statement (assignment (identifier_async_pub) identifier_async_pub (conditional_expression (identifier_pub) identifier_pub (comparison_operator (identifier_pub) identifier_pub (None) None )comparison_operator (call (attribute (identifier_self) identifier_self (identifier__gen_async_pub) identifier__gen_async_pub )attribute (argument_list )argument_list )call )conditional_expression )assignment )expression_statement (expression_statement (assignment (identifier_proc) identifier_proc (call (attribute (attribute (attribute (identifier_salt) identifier_salt (identifier_utils) identifier_utils )attribute (identifier_process) identifier_process )attribute (identifier_SignalHandlingMultiprocessingProcess) identifier_SignalHandlingMultiprocessingProcess )attribute (argument_list (keyword_argument (identifier_target) identifier_target (attribute (identifier_self) identifier_self (identifier__proc_function) identifier__proc_function )attribute )keyword_argument (keyword_argument (identifier_args) identifier_args (tuple (identifier_fun) identifier_fun (identifier_low) identifier_low (identifier_user) identifier_user (subscript (identifier_async_pub) identifier_async_pub (string_'tag') string_'tag' )subscript (subscript (identifier_async_pub) identifier_async_pub (string_'jid') string_'jid' )subscript )tuple )keyword_argument )argument_list )call )assignment )expression_statement (with_statement (with_clause (with_item (call (attribute (attribute (attribute (identifier_salt) identifier_salt (identifier_utils) identifier_utils )attribute (identifier_process) identifier_process )attribute (identifier_default_signals) identifier_default_signals )attribute (argument_list (attribute (identifier_signal) identifier_signal (identifier_SIGINT) identifier_SIGINT )attribute (attribute (identifier_signal) identifier_signal (identifier_SIGTERM) identifier_SIGTERM )attribute )argument_list )call )with_item )with_clause (block (expression_statement (call (attribute (identifier_proc) identifier_proc (identifier_start) identifier_start )attribute (argument_list )argument_list )call )expression_statement )block )with_statement (expression_statement (call (attribute (identifier_proc) identifier_proc (identifier_join) identifier_join )attribute (argument_list )argument_list )call )expression_statement (return_statement (identifier_async_pub) identifier_async_pub )return_statement )block )function_definition )module
Execute the function in a multiprocess and return the event tag to use to watch for the return
(module (function_definition (function_name_reject) function_name_reject (parameters (identifier_self) identifier_self (identifier_delivery_tag) identifier_delivery_tag (default_parameter (identifier_requeue) identifier_requeue (False) False )default_parameter )parameters (block (expression_statement (assignment (identifier_args) identifier_args (call (identifier_Writer) identifier_Writer (argument_list )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (call (attribute (identifier_args) identifier_args (identifier_write_longlong) identifier_write_longlong )attribute (argument_list (identifier_delivery_tag) identifier_delivery_tag )argument_list )call (line_continuation_\) line_continuation_\ (identifier_write_bit) identifier_write_bit )attribute (argument_list (identifier_requeue) identifier_requeue )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_self) identifier_self (identifier_send_frame) identifier_send_frame )attribute (argument_list (call (identifier_MethodFrame) identifier_MethodFrame (argument_list (attribute (identifier_self) identifier_self (identifier_channel_id) identifier_channel_id )attribute (integer_60) integer_60 (integer_90) integer_90 (identifier_args) identifier_args )argument_list )call )argument_list )call )expression_statement )block )function_definition )module
Reject a message.
(module (function_definition (function_name_uninstall) function_name_uninstall (parameters (identifier_ctx) identifier_ctx (identifier_state) identifier_state (default_parameter (identifier_all_dev) identifier_all_dev (False) False )default_parameter (default_parameter (identifier_all) identifier_all (False) False )default_parameter (dictionary_splat_pattern (identifier_kwargs) identifier_kwargs )dictionary_splat_pattern )parameters (block (import_from_statement (relative_import (import_prefix )import_prefix (dotted_name (identifier_core) identifier_core )dotted_name )relative_import (dotted_name (identifier_do_uninstall) identifier_do_uninstall )dotted_name )import_from_statement (expression_statement (assignment (identifier_retcode) identifier_retcode (call (identifier_do_uninstall) identifier_do_uninstall (argument_list (keyword_argument (identifier_packages) identifier_packages (attribute (attribute (identifier_state) identifier_state (identifier_installstate) identifier_installstate )attribute (identifier_packages) identifier_packages )attribute )keyword_argument (keyword_argument (identifier_editable_packages) identifier_editable_packages (attribute (attribute (identifier_state) identifier_state (identifier_installstate) identifier_installstate )attribute (identifier_editables) identifier_editables )attribute )keyword_argument (keyword_argument (identifier_three) identifier_three (attribute (identifier_state) identifier_state (identifier_three) identifier_three )attribute )keyword_argument (keyword_argument (identifier_python) identifier_python (attribute (identifier_state) identifier_state (identifier_python) identifier_python )attribute )keyword_argument (keyword_argument (identifier_system) identifier_system (attribute (identifier_state) identifier_state (identifier_system) identifier_system )attribute )keyword_argument (keyword_argument (identifier_lock) identifier_lock (not_operator (attribute (attribute (identifier_state) identifier_state (identifier_installstate) identifier_installstate )attribute (identifier_skip_lock) identifier_skip_lock )attribute )not_operator )keyword_argument (keyword_argument (identifier_all_dev) identifier_all_dev (identifier_all_dev) identifier_all_dev )keyword_argument (keyword_argument (identifier_all) identifier_all (identifier_all) identifier_all )keyword_argument (keyword_argument (identifier_keep_outdated) identifier_keep_outdated (attribute (attribute (identifier_state) identifier_state (identifier_installstate) identifier_installstate )attribute (identifier_keep_outdated) identifier_keep_outdated )attribute )keyword_argument (keyword_argument (identifier_pypi_mirror) identifier_pypi_mirror (attribute (identifier_state) identifier_state (identifier_pypi_mirror) identifier_pypi_mirror )attribute )keyword_argument (keyword_argument (identifier_ctx) identifier_ctx (identifier_ctx) identifier_ctx )keyword_argument )argument_list )call )assignment )expression_statement (if_statement (identifier_retcode) identifier_retcode (block (expression_statement (call (attribute (identifier_sys) identifier_sys (identifier_exit) identifier_exit )attribute (argument_list (identifier_retcode) identifier_retcode )argument_list )call )expression_statement )block )if_statement )block )function_definition )module
Un-installs a provided package and removes it from Pipfile.
(module (function_definition (function_name_new) function_name_new (parameters (typed_parameter (identifier_filename) identifier_filename (type (identifier_str) identifier_str )type )typed_parameter (keyword_separator )keyword_separator (typed_default_parameter (identifier_file_attrs) identifier_file_attrs (type (generic_type (identifier_Optional) identifier_Optional (type_parameter (type (generic_type (identifier_Dict) identifier_Dict (type_parameter (type (identifier_str) identifier_str )type (type (identifier_str) identifier_str )type )type_parameter )generic_type )type )type_parameter )generic_type )type (None) None )typed_default_parameter )parameters (type (identifier_LoomConnection) identifier_LoomConnection )type (block (if_statement (call (attribute (identifier_filename) identifier_filename (identifier_startswith) identifier_startswith )attribute (argument_list (string_"~/") string_"~/" )argument_list )call (block (expression_statement (assignment (identifier_filename) identifier_filename (call (attribute (attribute (identifier_os) identifier_os (identifier_path) identifier_path )attribute (identifier_expanduser) identifier_expanduser )attribute (argument_list (identifier_filename) identifier_filename )argument_list )call )assignment )expression_statement )block )if_statement (if_statement (comparison_operator (identifier_file_attrs) identifier_file_attrs (None) None )comparison_operator (block (expression_statement (assignment (identifier_file_attrs) identifier_file_attrs (dictionary )dictionary )assignment )expression_statement )block )if_statement (expression_statement (assignment (identifier_f) identifier_f (call (attribute (identifier_h5py) identifier_h5py (identifier_File) identifier_File )attribute (argument_list (keyword_argument (identifier_name) identifier_name (identifier_filename) identifier_filename )keyword_argument (keyword_argument (identifier_mode) identifier_mode (string_'w') string_'w' )keyword_argument )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (identifier_f) identifier_f (identifier_create_group) identifier_create_group )attribute (argument_list (string_'/layers') string_'/layers' )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_f) identifier_f (identifier_create_group) identifier_create_group )attribute (argument_list (string_'/row_attrs') string_'/row_attrs' )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_f) identifier_f (identifier_create_group) identifier_create_group )attribute (argument_list (string_'/col_attrs') string_'/col_attrs' )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_f) identifier_f (identifier_create_group) identifier_create_group )attribute (argument_list (string_'/row_graphs') string_'/row_graphs' )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_f) identifier_f (identifier_create_group) identifier_create_group )attribute (argument_list (string_'/col_graphs') string_'/col_graphs' )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_f) identifier_f (identifier_flush) identifier_flush )attribute (argument_list )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_f) identifier_f (identifier_close) identifier_close )attribute (argument_list )argument_list )call )expression_statement (expression_statement (assignment (identifier_ds) identifier_ds (call (identifier_connect) identifier_connect (argument_list (identifier_filename) identifier_filename (keyword_argument (identifier_validate) identifier_validate (False) False )keyword_argument )argument_list )call )assignment )expression_statement (for_statement (identifier_vals) identifier_vals (identifier_file_attrs) identifier_file_attrs (block (expression_statement (assignment (subscript (attribute (identifier_ds) identifier_ds (identifier_attrs) identifier_attrs )attribute (identifier_vals) identifier_vals )subscript (subscript (identifier_file_attrs) identifier_file_attrs (identifier_vals) identifier_vals )subscript )assignment )expression_statement )block )for_statement (expression_statement (assignment (identifier_currentTime) identifier_currentTime (call (attribute (identifier_time) identifier_time (identifier_localtime) identifier_localtime )attribute (argument_list (call (attribute (identifier_time) identifier_time (identifier_time) identifier_time )attribute (argument_list )argument_list )call )argument_list )call )assignment )expression_statement (expression_statement (assignment (subscript (attribute (identifier_ds) identifier_ds (identifier_attrs) identifier_attrs )attribute (string_'CreationDate') string_'CreationDate' )subscript (call (identifier_timestamp) identifier_timestamp (argument_list )argument_list )call )assignment )expression_statement (expression_statement (assignment (subscript (attribute (identifier_ds) identifier_ds (identifier_attrs) identifier_attrs )attribute (string_"LOOM_SPEC_VERSION") string_"LOOM_SPEC_VERSION" )subscript (attribute (identifier_loompy) identifier_loompy (identifier_loom_spec_version) identifier_loom_spec_version )attribute )assignment )expression_statement (return_statement (identifier_ds) identifier_ds )return_statement )block )function_definition )module
Create an empty Loom file, and return it as a context manager.
(module (function_definition (function_name_copy_layer_keywords) function_name_copy_layer_keywords (parameters (identifier_layer_keywords) identifier_layer_keywords )parameters (block (expression_statement (assignment (identifier_copy_keywords) identifier_copy_keywords (dictionary )dictionary )assignment )expression_statement (for_statement (pattern_list (identifier_key) identifier_key (identifier_value) identifier_value )pattern_list (call (identifier_list) identifier_list (argument_list (call (attribute (identifier_layer_keywords) identifier_layer_keywords (identifier_items) identifier_items )attribute (argument_list )argument_list )call )argument_list )call (block (if_statement (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_value) identifier_value (identifier_QUrl) identifier_QUrl )argument_list )call (block (expression_statement (assignment (subscript (identifier_copy_keywords) identifier_copy_keywords (identifier_key) identifier_key )subscript (call (attribute (identifier_value) identifier_value (identifier_toString) identifier_toString )attribute (argument_list )argument_list )call )assignment )expression_statement )block (elif_clause (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_value) identifier_value (identifier_datetime) identifier_datetime )argument_list )call (block (expression_statement (assignment (subscript (identifier_copy_keywords) identifier_copy_keywords (identifier_key) identifier_key )subscript (call (attribute (call (attribute (identifier_value) identifier_value (identifier_date) identifier_date )attribute (argument_list )argument_list )call (identifier_isoformat) identifier_isoformat )attribute (argument_list )argument_list )call )assignment )expression_statement )block )elif_clause (elif_clause (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_value) identifier_value (identifier_QDate) identifier_QDate )argument_list )call (block (expression_statement (assignment (subscript (identifier_copy_keywords) identifier_copy_keywords (identifier_key) identifier_key )subscript (call (attribute (identifier_value) identifier_value (identifier_toString) identifier_toString )attribute (argument_list (attribute (identifier_Qt) identifier_Qt (identifier_ISODate) identifier_ISODate )attribute )argument_list )call )assignment )expression_statement )block )elif_clause (elif_clause (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_value) identifier_value (identifier_QDateTime) identifier_QDateTime )argument_list )call (block (expression_statement (assignment (subscript (identifier_copy_keywords) identifier_copy_keywords (identifier_key) identifier_key )subscript (call (attribute (identifier_value) identifier_value (identifier_toString) identifier_toString )attribute (argument_list (attribute (identifier_Qt) identifier_Qt (identifier_ISODate) identifier_ISODate )attribute )argument_list )call )assignment )expression_statement )block )elif_clause (elif_clause (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_value) identifier_value (identifier_date) identifier_date )argument_list )call (block (expression_statement (assignment (subscript (identifier_copy_keywords) identifier_copy_keywords (identifier_key) identifier_key )subscript (call (attribute (identifier_value) identifier_value (identifier_isoformat) identifier_isoformat )attribute (argument_list )argument_list )call )assignment )expression_statement )block )elif_clause (else_clause (block (expression_statement (assignment (subscript (identifier_copy_keywords) identifier_copy_keywords (identifier_key) identifier_key )subscript (call (identifier_deepcopy) identifier_deepcopy (argument_list (identifier_value) identifier_value )argument_list )call )assignment )expression_statement )block )else_clause )if_statement )block )for_statement (return_statement (identifier_copy_keywords) identifier_copy_keywords )return_statement )block )function_definition )module
Helper to make a deep copy of a layer keywords. :param layer_keywords: A dictionary of layer's keywords. :type layer_keywords: dict :returns: A deep copy of layer keywords. :rtype: dict
(module (function_definition (function_name_get_analyses) function_name_get_analyses (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_analyses) identifier_analyses (call (attribute (attribute (identifier_self) identifier_self (identifier_context) identifier_context )attribute (identifier_getAnalyses) identifier_getAnalyses )attribute (argument_list (keyword_argument (identifier_full_objects) identifier_full_objects (True) True )keyword_argument )argument_list )call )assignment )expression_statement (return_statement (call (identifier_filter) identifier_filter (argument_list (attribute (identifier_self) identifier_self (identifier_is_analysis_attachment_allowed) identifier_is_analysis_attachment_allowed )attribute (identifier_analyses) identifier_analyses )argument_list )call )return_statement )block )function_definition )module
Returns a list of analyses from the AR
(module (function_definition (function_name_decrypt_block) function_name_decrypt_block (parameters (identifier_self) identifier_self (identifier_cipherText) identifier_cipherText )parameters (block (if_statement (not_operator (attribute (identifier_self) identifier_self (identifier_initialized) identifier_initialized )attribute )not_operator (block (raise_statement (call (identifier_TypeError) identifier_TypeError (argument_list (string_"CamCrypt object has not been initialized") string_"CamCrypt object has not been initialized" )argument_list )call )raise_statement )block )if_statement (if_statement (comparison_operator (call (identifier_len) identifier_len (argument_list (identifier_cipherText) identifier_cipherText )argument_list )call (identifier_BLOCK_SIZE) identifier_BLOCK_SIZE )comparison_operator (block (raise_statement (call (identifier_ValueError) identifier_ValueError (argument_list (binary_operator (string_"cipherText must be %d bytes long (received %d bytes)") string_"cipherText must be %d bytes long (received %d bytes)" (tuple (identifier_BLOCK_SIZE) identifier_BLOCK_SIZE (call (identifier_len) identifier_len (argument_list (identifier_cipherText) identifier_cipherText )argument_list )call )tuple )binary_operator )argument_list )call )raise_statement )block )if_statement (expression_statement (assignment (identifier_plain) identifier_plain (call (attribute (identifier_ctypes) identifier_ctypes (identifier_create_string_buffer) identifier_create_string_buffer )attribute (argument_list (identifier_BLOCK_SIZE) identifier_BLOCK_SIZE )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (identifier_self) identifier_self (identifier_decblock) identifier_decblock )attribute (argument_list (attribute (identifier_self) identifier_self (identifier_bitlen) identifier_bitlen )attribute (identifier_cipherText) identifier_cipherText (attribute (identifier_self) identifier_self (identifier_keytable) identifier_keytable )attribute (identifier_plain) identifier_plain )argument_list )call )expression_statement (return_statement (attribute (identifier_plain) identifier_plain (identifier_raw) identifier_raw )attribute )return_statement )block )function_definition )module
Decrypt a 16-byte block of data. NOTE: This function was formerly called `decrypt`, but was changed when support for decrypting arbitrary-length strings was added. Args: cipherText (str): 16-byte data. Returns: 16-byte str. Raises: TypeError if CamCrypt object has not been initialized. ValueError if `cipherText` is not BLOCK_SIZE (i.e. 16) bytes.
(module (function_definition (function_name_enable_repositories) function_name_enable_repositories (parameters (identifier_self) identifier_self (identifier_repositories) identifier_repositories )parameters (block (for_statement (identifier_r) identifier_r (identifier_repositories) identifier_repositories (block (if_statement (comparison_operator (subscript (identifier_r) identifier_r (string_'type') string_'type' )subscript (string_'rhsm_channel') string_'rhsm_channel' )comparison_operator (block (continue_statement )continue_statement )block )if_statement (if_statement (comparison_operator (subscript (identifier_r) identifier_r (string_'name') string_'name' )subscript (attribute (identifier_self) identifier_self (identifier_rhsm_channels) identifier_rhsm_channels )attribute )comparison_operator (block (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_rhsm_channels) identifier_rhsm_channels )attribute (identifier_append) identifier_append )attribute (argument_list (subscript (identifier_r) identifier_r (string_'name') string_'name' )subscript )argument_list )call )expression_statement )block )if_statement )block )for_statement (if_statement (attribute (identifier_self) identifier_self (identifier_rhsm_active) identifier_rhsm_active )attribute (block (expression_statement (assignment (identifier_subscription_cmd) identifier_subscription_cmd (binary_operator (string_"subscription-manager repos '--disable=*' --enable=") string_"subscription-manager repos '--disable=*' --enable=" (call (attribute (string_' --enable=') string_' --enable=' (identifier_join) identifier_join )attribute (argument_list (attribute (identifier_self) identifier_self (identifier_rhsm_channels) identifier_rhsm_channels )attribute )argument_list )call )binary_operator )assignment )expression_statement (expression_statement (call (attribute (identifier_self) identifier_self (identifier_run) identifier_run )attribute (argument_list (identifier_subscription_cmd) identifier_subscription_cmd )argument_list )call )expression_statement )block )if_statement (expression_statement (assignment (identifier_repo_files) identifier_repo_files (list_comprehension (identifier_r) identifier_r (for_in_clause (identifier_r) identifier_r (identifier_repositories) identifier_repositories )for_in_clause (if_clause (comparison_operator (subscript (identifier_r) identifier_r (string_'type') string_'type' )subscript (string_'yum_repo') string_'yum_repo' )comparison_operator )if_clause )list_comprehension )assignment )expression_statement (for_statement (identifier_repo_file) identifier_repo_file (identifier_repo_files) identifier_repo_files (block (expression_statement (call (attribute (identifier_self) identifier_self (identifier_create_file) identifier_create_file )attribute (argument_list (subscript (identifier_repo_file) identifier_repo_file (string_'dest') string_'dest' )subscript (subscript (identifier_repo_file) identifier_repo_file (string_'content') string_'content' )subscript )argument_list )call )expression_statement )block )for_statement (expression_statement (assignment (identifier_packages) identifier_packages (list_comprehension (subscript (identifier_r) identifier_r (string_'name') string_'name' )subscript (for_in_clause (identifier_r) identifier_r (identifier_repositories) identifier_repositories )for_in_clause (if_clause (comparison_operator (subscript (identifier_r) identifier_r (string_'type') string_'type' )subscript (string_'package') string_'package' )comparison_operator )if_clause )list_comprehension )assignment )expression_statement (if_statement (identifier_packages) identifier_packages (block (expression_statement (call (attribute (identifier_self) identifier_self (identifier_yum_install) identifier_yum_install )attribute (argument_list (identifier_packages) identifier_packages )argument_list )call )expression_statement )block )if_statement )block )function_definition )module
Enable a list of RHSM repositories. :param repositories: a dict in this format: [{'type': 'rhsm_channel', 'name': 'rhel-7-server-rpms'}]
(module (function_definition (function_name__handle_dumps) function_name__handle_dumps (parameters (identifier_self) identifier_self (identifier_handler) identifier_handler (dictionary_splat_pattern (identifier_kwargs) identifier_kwargs )dictionary_splat_pattern )parameters (block (return_statement (call (attribute (identifier_handler) identifier_handler (identifier_dumps) identifier_dumps )attribute (argument_list (attribute (identifier_self) identifier_self (identifier___class__) identifier___class__ )attribute (call (identifier_to_dict) identifier_to_dict (argument_list (identifier_self) identifier_self )argument_list )call (dictionary_splat (identifier_kwargs) identifier_kwargs )dictionary_splat )argument_list )call )return_statement )block )function_definition )module
Dumps caller, used by partial method for dynamic handler assignments. :param object handler: The dump handler :return: The dumped string :rtype: str
(module (function_definition (function_name_until) function_name_until (parameters (identifier_self) identifier_self (identifier_method) identifier_method (default_parameter (identifier_message) identifier_message (string_'') string_'' )default_parameter )parameters (block (expression_statement (assignment (identifier_screen) identifier_screen (None) None )assignment )expression_statement (expression_statement (assignment (identifier_stacktrace) identifier_stacktrace (None) None )assignment )expression_statement (expression_statement (assignment (identifier_end_time) identifier_end_time (binary_operator (call (attribute (identifier_time) identifier_time (identifier_time) identifier_time )attribute (argument_list )argument_list )call (attribute (identifier_self) identifier_self (identifier__timeout) identifier__timeout )attribute )binary_operator )assignment )expression_statement (while_statement (True) True (block (try_statement (block (expression_statement (assignment (identifier_value) identifier_value (call (identifier_method) identifier_method (argument_list (attribute (identifier_self) identifier_self (identifier__driver) identifier__driver )attribute )argument_list )call )assignment )expression_statement (if_statement (identifier_value) identifier_value (block (return_statement (identifier_value) identifier_value )return_statement )block )if_statement )block (except_clause (as_pattern (attribute (identifier_self) identifier_self (identifier__ignored_exceptions) identifier__ignored_exceptions )attribute (as_pattern_target (identifier_exc) identifier_exc )as_pattern_target )as_pattern (block (expression_statement (assignment (identifier_screen) identifier_screen (call (identifier_getattr) identifier_getattr (argument_list (identifier_exc) identifier_exc (string_'screen') string_'screen' (None) None )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_stacktrace) identifier_stacktrace (call (identifier_getattr) identifier_getattr (argument_list (identifier_exc) identifier_exc (string_'stacktrace') string_'stacktrace' (None) None )argument_list )call )assignment )expression_statement )block )except_clause )try_statement (expression_statement (call (attribute (identifier_time) identifier_time (identifier_sleep) identifier_sleep )attribute (argument_list (attribute (identifier_self) identifier_self (identifier__poll) identifier__poll )attribute )argument_list )call )expression_statement (if_statement (comparison_operator (call (attribute (identifier_time) identifier_time (identifier_time) identifier_time )attribute (argument_list )argument_list )call (identifier_end_time) identifier_end_time )comparison_operator (block (break_statement )break_statement )block )if_statement )block )while_statement (raise_statement (call (identifier_TimeoutException) identifier_TimeoutException (argument_list (identifier_message) identifier_message (identifier_screen) identifier_screen (identifier_stacktrace) identifier_stacktrace )argument_list )call )raise_statement )block )function_definition )module
Calls the method provided with the driver as an argument until the \ return value does not evaluate to ``False``. :param method: callable(WebDriver) :param message: optional message for :exc:`TimeoutException` :returns: the result of the last call to `method` :raises: :exc:`selenium.common.exceptions.TimeoutException` if timeout occurs
(module (function_definition (function_name_read_local_manifest) function_name_read_local_manifest (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_manifest) identifier_manifest (call (identifier_file_or_default) identifier_file_or_default (argument_list (call (attribute (identifier_self) identifier_self (identifier_get_full_file_path) identifier_get_full_file_path )attribute (argument_list (attribute (identifier_self) identifier_self (identifier_manifest_file) identifier_manifest_file )attribute )argument_list )call (dictionary (pair (string_'format_version') string_'format_version' (integer_2) integer_2 )pair (pair (string_'root') string_'root' (string_'/') string_'/' )pair (pair (string_'have_revision') string_'have_revision' (string_'root') string_'root' )pair (pair (string_'files') string_'files' (dictionary )dictionary )pair )dictionary (attribute (identifier_json) identifier_json (identifier_loads) identifier_loads )attribute )argument_list )call )assignment )expression_statement (if_statement (boolean_operator (comparison_operator (string_'format_version') string_'format_version' (identifier_manifest) identifier_manifest )comparison_operator (comparison_operator (subscript (identifier_manifest) identifier_manifest (string_'format_version') string_'format_version' )subscript (integer_2) integer_2 )comparison_operator )boolean_operator (block (raise_statement (call (identifier_SystemExit) identifier_SystemExit (argument_list (string_'Please update the client manifest format') string_'Please update the client manifest format' )argument_list )call )raise_statement )block )if_statement (return_statement (identifier_manifest) identifier_manifest )return_statement )block )function_definition )module
Read the file manifest, or create a new one if there isn't one already
(module (function_definition (function_name_platform_path) function_name_platform_path (parameters (identifier_path) identifier_path )parameters (block (expression_statement (identifier_r) identifier_r )expression_statement (try_statement (block (if_statement (comparison_operator (identifier_path) identifier_path (string_'') string_'' )comparison_operator (block (raise_statement (call (identifier_ValueError) identifier_ValueError (argument_list (string_'path cannot be the empty string') string_'path cannot be the empty string' )argument_list )call )raise_statement )block )if_statement (expression_statement (assignment (identifier_path1) identifier_path1 (call (identifier_truepath_relative) identifier_truepath_relative (argument_list (identifier_path) identifier_path )argument_list )call )assignment )expression_statement (if_statement (call (attribute (attribute (identifier_sys) identifier_sys (identifier_platform) identifier_platform )attribute (identifier_startswith) identifier_startswith )attribute (argument_list (string_'win32') string_'win32' )argument_list )call (block (expression_statement (assignment (identifier_path2) identifier_path2 (call (identifier_expand_win32_shortname) identifier_expand_win32_shortname (argument_list (identifier_path1) identifier_path1 )argument_list )call )assignment )expression_statement )block (else_clause (block (expression_statement (assignment (identifier_path2) identifier_path2 (identifier_path1) identifier_path1 )assignment )expression_statement )block )else_clause )if_statement )block (except_clause (as_pattern (identifier_Exception) identifier_Exception (as_pattern_target (identifier_ex) identifier_ex )as_pattern_target )as_pattern (block (expression_statement (call (attribute (identifier_util_dbg) identifier_util_dbg (identifier_printex) identifier_printex )attribute (argument_list (identifier_ex) identifier_ex (keyword_argument (identifier_keys) identifier_keys (list (string_'path') string_'path' (string_'path1') string_'path1' (string_'path2') string_'path2' )list )keyword_argument )argument_list )call )expression_statement (raise_statement )raise_statement )block )except_clause )try_statement (return_statement (identifier_path2) identifier_path2 )return_statement )block )function_definition )module
r""" Returns platform specific path for pyinstaller usage Args: path (str): Returns: str: path2 CommandLine: python -m utool.util_path --test-platform_path Example: >>> # ENABLE_DOCTEST >>> # FIXME: find examples of the wird paths this fixes (mostly on win32 i think) >>> from utool.util_path import * # NOQA >>> import utool as ut >>> path = 'some/odd/../weird/path' >>> path2 = platform_path(path) >>> result = str(path2) >>> if ut.WIN32: ... ut.assert_eq(path2, r'some\weird\path') ... else: ... ut.assert_eq(path2, r'some/weird/path') Example: >>> # ENABLE_DOCTEST >>> from utool.util_path import * # NOQA >>> import utool as ut # NOQA >>> if ut.WIN32: ... path = 'C:/PROGRA~2' ... path2 = platform_path(path) ... assert path2 == u'..\\..\\..\\..\\Program Files (x86)'
(module (function_definition (function_name_setPrefix) function_name_setPrefix (parameters (identifier_self) identifier_self (identifier_p) identifier_p (default_parameter (identifier_u) identifier_u (None) None )default_parameter )parameters (block (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_prefix) identifier_prefix )attribute (identifier_p) identifier_p )assignment )expression_statement (if_statement (boolean_operator (comparison_operator (identifier_p) identifier_p (None) None )comparison_operator (comparison_operator (identifier_u) identifier_u (None) None )comparison_operator )boolean_operator (block (expression_statement (call (attribute (identifier_self) identifier_self (identifier_addPrefix) identifier_addPrefix )attribute (argument_list (identifier_p) identifier_p (identifier_u) identifier_u )argument_list )call )expression_statement )block )if_statement (return_statement (identifier_self) identifier_self )return_statement )block )function_definition )module
Set the element namespace prefix. @param p: A new prefix for the element. @type p: basestring @param u: A namespace URI to be mapped to the prefix. @type u: basestring @return: self @rtype: L{Element}
(module (function_definition (function_name_dir2) function_name_dir2 (parameters (identifier_obj) identifier_obj )parameters (block (expression_statement (assignment (identifier_attrs) identifier_attrs (call (identifier_set) identifier_set (argument_list )argument_list )call )assignment )expression_statement (if_statement (not_operator (call (identifier_hasattr) identifier_hasattr (argument_list (identifier_obj) identifier_obj (string_'__bases__') string_'__bases__' )argument_list )call )not_operator (block (if_statement (not_operator (call (identifier_hasattr) identifier_hasattr (argument_list (identifier_obj) identifier_obj (string_'__class__') string_'__class__' )argument_list )call )not_operator (block (return_statement (call (identifier_sorted) identifier_sorted (argument_list (call (identifier_get_attrs) identifier_get_attrs (argument_list (identifier_obj) identifier_obj )argument_list )call )argument_list )call )return_statement )block )if_statement (expression_statement (assignment (identifier_klass) identifier_klass (attribute (identifier_obj) identifier_obj (identifier___class__) identifier___class__ )attribute )assignment )expression_statement (expression_statement (call (attribute (identifier_attrs) identifier_attrs (identifier_update) identifier_update )attribute (argument_list (call (identifier_get_attrs) identifier_get_attrs (argument_list (identifier_klass) identifier_klass )argument_list )call )argument_list )call )expression_statement )block (else_clause (block (expression_statement (assignment (identifier_klass) identifier_klass (identifier_obj) identifier_obj )assignment )expression_statement )block )else_clause )if_statement (for_statement (identifier_cls) identifier_cls (attribute (identifier_klass) identifier_klass (identifier___bases__) identifier___bases__ )attribute (block (expression_statement (call (attribute (identifier_attrs) identifier_attrs (identifier_update) identifier_update )attribute (argument_list (call (identifier_get_attrs) identifier_get_attrs (argument_list (identifier_cls) identifier_cls )argument_list )call )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_attrs) identifier_attrs (identifier_update) identifier_update )attribute (argument_list (call (identifier_dir2) identifier_dir2 (argument_list (identifier_cls) identifier_cls )argument_list )call )argument_list )call )expression_statement )block )for_statement (expression_statement (call (attribute (identifier_attrs) identifier_attrs (identifier_update) identifier_update )attribute (argument_list (call (identifier_get_attrs) identifier_get_attrs (argument_list (identifier_obj) identifier_obj )argument_list )call )argument_list )call )expression_statement (return_statement (call (identifier_list) identifier_list (argument_list (identifier_attrs) identifier_attrs )argument_list )call )return_statement )block )function_definition )module
Default dir implementation. Inspired by gist: katyukha/dirmixin.py https://gist.github.com/katyukha/c6e5e2b829e247c9b009
(module (function_definition (function_name_list_templates) function_name_list_templates (parameters )parameters (block (expression_statement (assignment (identifier_templates) identifier_templates (list_comprehension (identifier_f) identifier_f (for_in_clause (identifier_f) identifier_f (call (attribute (identifier_glob) identifier_glob (identifier_glob) identifier_glob )attribute (argument_list (call (attribute (attribute (identifier_os) identifier_os (identifier_path) identifier_path )attribute (identifier_join) identifier_join )attribute (argument_list (identifier_template_path) identifier_template_path (string_'*.yaml') string_'*.yaml' )argument_list )call )argument_list )call )for_in_clause )list_comprehension )assignment )expression_statement (return_statement (identifier_templates) identifier_templates )return_statement )block )function_definition )module
Returns a list of all templates.
(module (function_definition (function_name_replace) function_name_replace (parameters (identifier_self) identifier_self (default_parameter (identifier_year) identifier_year (None) None )default_parameter (default_parameter (identifier_week) identifier_week (None) None )default_parameter )parameters (block (return_statement (call (attribute (identifier_self) identifier_self (identifier___class__) identifier___class__ )attribute (argument_list (conditional_expression (attribute (identifier_self) identifier_self (identifier_year) identifier_year )attribute (comparison_operator (identifier_year) identifier_year (None) None )comparison_operator (identifier_year) identifier_year )conditional_expression (conditional_expression (attribute (identifier_self) identifier_self (identifier_week) identifier_week )attribute (comparison_operator (identifier_week) identifier_week (None) None )comparison_operator (identifier_week) identifier_week )conditional_expression )argument_list )call )return_statement )block )function_definition )module
Return a Week with either the year or week attribute value replaced
(module (function_definition (function_name_get_version_manifest) function_name_get_version_manifest (parameters (identifier_name) identifier_name (default_parameter (identifier_data) identifier_data (None) None )default_parameter (default_parameter (identifier_required) identifier_required (False) False )default_parameter )parameters (block (expression_statement (assignment (identifier_manifest_dir) identifier_manifest_dir (call (identifier__get_manifest_dir) identifier__get_manifest_dir (argument_list (identifier_data) identifier_data (identifier_name) identifier_name )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_manifest_vs) identifier_manifest_vs (boolean_operator (call (identifier__get_versions_manifest) identifier__get_versions_manifest (argument_list (identifier_manifest_dir) identifier_manifest_dir )argument_list )call (list )list )boolean_operator )assignment )expression_statement (for_statement (identifier_x) identifier_x (identifier_manifest_vs) identifier_manifest_vs (block (if_statement (comparison_operator (subscript (identifier_x) identifier_x (string_"program") string_"program" )subscript (identifier_name) identifier_name )comparison_operator (block (expression_statement (assignment (identifier_v) identifier_v (call (attribute (identifier_x) identifier_x (identifier_get) identifier_get )attribute (argument_list (string_"version") string_"version" (string_"") string_"" )argument_list )call )assignment )expression_statement (if_statement (identifier_v) identifier_v (block (return_statement (identifier_v) identifier_v )return_statement )block )if_statement )block )if_statement )block )for_statement (if_statement (identifier_required) identifier_required (block (raise_statement (call (identifier_ValueError) identifier_ValueError (argument_list (binary_operator (string_"Did not find %s in install manifest. Could not check version.") string_"Did not find %s in install manifest. Could not check version." (identifier_name) identifier_name )binary_operator )argument_list )call )raise_statement )block )if_statement (return_statement (string_"") string_"" )return_statement )block )function_definition )module
Retrieve a version from the currently installed manifest.
(module (function_definition (function_name_get_convert_dist) function_name_get_convert_dist (parameters (typed_parameter (identifier_dist_units_in) identifier_dist_units_in (type (identifier_str) identifier_str )type )typed_parameter (typed_parameter (identifier_dist_units_out) identifier_dist_units_out (type (identifier_str) identifier_str )type )typed_parameter )parameters (type (generic_type (identifier_Callable) identifier_Callable (type_parameter (type (list (identifier_float) identifier_float )list )type (type (identifier_float) identifier_float )type )type_parameter )generic_type )type (block (expression_statement (assignment (pattern_list (identifier_di) identifier_di (identifier_do) identifier_do )pattern_list (expression_list (identifier_dist_units_in) identifier_dist_units_in (identifier_dist_units_out) identifier_dist_units_out )expression_list )assignment )expression_statement (expression_statement (assignment (identifier_DU) identifier_DU (attribute (identifier_cs) identifier_cs (identifier_DIST_UNITS) identifier_DIST_UNITS )attribute )assignment )expression_statement (if_statement (not_operator (parenthesized_expression (boolean_operator (comparison_operator (identifier_di) identifier_di (identifier_DU) identifier_DU )comparison_operator (comparison_operator (identifier_do) identifier_do (identifier_DU) identifier_DU )comparison_operator )boolean_operator )parenthesized_expression )not_operator (block (raise_statement (call (identifier_ValueError) identifier_ValueError (argument_list (string_f"Distance units must lie in {DU}") string_f"Distance units must lie in {DU}" )argument_list )call )raise_statement )block )if_statement (expression_statement (assignment (identifier_d) identifier_d (dictionary (pair (string_"ft") string_"ft" (dictionary (pair (string_"ft") string_"ft" (integer_1) integer_1 )pair (pair (string_"m") string_"m" (float_0.3048) float_0.3048 )pair (pair (string_"mi") string_"mi" (binary_operator (integer_1) integer_1 (integer_5280) integer_5280 )binary_operator )pair (pair (string_"km") string_"km" (float_0.0003048) float_0.0003048 )pair )dictionary )pair (pair (string_"m") string_"m" (dictionary (pair (string_"ft") string_"ft" (binary_operator (integer_1) integer_1 (float_0.3048) float_0.3048 )binary_operator )pair (pair (string_"m") string_"m" (integer_1) integer_1 )pair (pair (string_"mi") string_"mi" (binary_operator (integer_1) integer_1 (float_1609.344) float_1609.344 )binary_operator )pair (pair (string_"km") string_"km" (binary_operator (integer_1) integer_1 (integer_1000) integer_1000 )binary_operator )pair )dictionary )pair (pair (string_"mi") string_"mi" (dictionary (pair (string_"ft") string_"ft" (integer_5280) integer_5280 )pair (pair (string_"m") string_"m" (float_1609.344) float_1609.344 )pair (pair (string_"mi") string_"mi" (integer_1) integer_1 )pair (pair (string_"km") string_"km" (float_1.609344) float_1.609344 )pair )dictionary )pair (pair (string_"km") string_"km" (dictionary (pair (string_"ft") string_"ft" (binary_operator (integer_1) integer_1 (float_0.0003048) float_0.0003048 )binary_operator )pair (pair (string_"m") string_"m" (integer_1000) integer_1000 )pair (pair (string_"mi") string_"mi" (binary_operator (integer_1) integer_1 (float_1.609344) float_1.609344 )binary_operator )pair (pair (string_"km") string_"km" (integer_1) integer_1 )pair )dictionary )pair )dictionary )assignment )expression_statement (return_statement (lambda (lambda_parameters (identifier_x) identifier_x )lambda_parameters (binary_operator (subscript (subscript (identifier_d) identifier_d (identifier_di) identifier_di )subscript (identifier_do) identifier_do )subscript (identifier_x) identifier_x )binary_operator )lambda )return_statement )block )function_definition )module
Return a function of the form distance in the units ``dist_units_in`` -> distance in the units ``dist_units_out`` Only supports distance units in :const:`constants.DIST_UNITS`.
(module (function_definition (function_name_assemble_points) function_name_assemble_points (parameters (identifier_graph) identifier_graph (identifier_assemblies) identifier_assemblies (identifier_multicolor) identifier_multicolor (default_parameter (identifier_verbose) identifier_verbose (False) False )default_parameter (default_parameter (identifier_verbose_destination) identifier_verbose_destination (None) None )default_parameter )parameters (block (if_statement (identifier_verbose) identifier_verbose (block (expression_statement (call (identifier_print) identifier_print (argument_list (string_">>Assembling for multicolor") string_">>Assembling for multicolor" (list_comprehension (attribute (identifier_e) identifier_e (identifier_name) identifier_name )attribute (for_in_clause (identifier_e) identifier_e (call (attribute (attribute (identifier_multicolor) identifier_multicolor (identifier_multicolors) identifier_multicolors )attribute (identifier_elements) identifier_elements )attribute (argument_list )argument_list )call )for_in_clause )list_comprehension (keyword_argument (identifier_file) identifier_file (identifier_verbose_destination) identifier_verbose_destination )keyword_argument )argument_list )call )expression_statement )block )if_statement (for_statement (identifier_assembly) identifier_assembly (identifier_assemblies) identifier_assemblies (block (expression_statement (assignment (pattern_list (identifier_v1) identifier_v1 (identifier_v2) identifier_v2 (tuple_pattern (identifier_before) identifier_before (identifier_after) identifier_after (identifier_ex_data) identifier_ex_data )tuple_pattern )pattern_list (identifier_assembly) identifier_assembly )assignment )expression_statement (expression_statement (assignment (identifier_iv1) identifier_iv1 (call (identifier_get_irregular_vertex) identifier_get_irregular_vertex (argument_list (call (identifier_get_irregular_edge_by_vertex) identifier_get_irregular_edge_by_vertex (argument_list (identifier_graph) identifier_graph (keyword_argument (identifier_vertex) identifier_vertex (identifier_v1) identifier_v1 )keyword_argument )argument_list )call )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_iv2) identifier_iv2 (call (identifier_get_irregular_vertex) identifier_get_irregular_vertex (argument_list (call (identifier_get_irregular_edge_by_vertex) identifier_get_irregular_edge_by_vertex (argument_list (identifier_graph) identifier_graph (keyword_argument (identifier_vertex) identifier_vertex (identifier_v2) identifier_v2 )keyword_argument )argument_list )call )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_kbreak) identifier_kbreak (call (identifier_KBreak) identifier_KBreak (argument_list (keyword_argument (identifier_start_edges) identifier_start_edges (list (tuple (identifier_v1) identifier_v1 (identifier_iv1) identifier_iv1 )tuple (tuple (identifier_v2) identifier_v2 (identifier_iv2) identifier_iv2 )tuple )list )keyword_argument (keyword_argument (identifier_result_edges) identifier_result_edges (list (tuple (identifier_v1) identifier_v1 (identifier_v2) identifier_v2 )tuple (tuple (identifier_iv1) identifier_iv1 (identifier_iv2) identifier_iv2 )tuple )list )keyword_argument (keyword_argument (identifier_multicolor) identifier_multicolor (identifier_multicolor) identifier_multicolor )keyword_argument )argument_list )call )assignment )expression_statement (if_statement (identifier_verbose) identifier_verbose (block (expression_statement (call (identifier_print) identifier_print (argument_list (string_"(") string_"(" (attribute (identifier_v1) identifier_v1 (identifier_name) identifier_name )attribute (string_",") string_"," (attribute (identifier_iv1) identifier_iv1 (identifier_name) identifier_name )attribute (string_")x(") string_")x(" (attribute (identifier_v2) identifier_v2 (identifier_name) identifier_name )attribute (string_",") string_"," (attribute (identifier_iv2) identifier_iv2 (identifier_name) identifier_name )attribute (string_")") string_")" (string_" score=") string_" score=" (binary_operator (identifier_before) identifier_before (identifier_after) identifier_after )binary_operator (keyword_argument (identifier_sep) identifier_sep (string_"") string_"" )keyword_argument (keyword_argument (identifier_file) identifier_file (identifier_verbose_destination) identifier_verbose_destination )keyword_argument )argument_list )call )expression_statement )block )if_statement (expression_statement (call (attribute (identifier_graph) identifier_graph (identifier_apply_kbreak) identifier_apply_kbreak )attribute (argument_list (keyword_argument (identifier_kbreak) identifier_kbreak (identifier_kbreak) identifier_kbreak )keyword_argument (keyword_argument (identifier_merge) identifier_merge (True) True )keyword_argument )argument_list )call )expression_statement )block )for_statement )block )function_definition )module
This function actually does assembling being provided a graph, to play with a list of assembly points and a multicolor, which to assemble
(module (function_definition (function_name__parse_methods) function_name__parse_methods (parameters (identifier_cls) identifier_cls (identifier_list_string) identifier_list_string )parameters (block (if_statement (comparison_operator (identifier_list_string) identifier_list_string (None) None )comparison_operator (block (return_statement (attribute (identifier_APIServer) identifier_APIServer (identifier_DEFAULT_METHODS) identifier_DEFAULT_METHODS )attribute )return_statement )block )if_statement (expression_statement (assignment (identifier_json_list) identifier_json_list (call (attribute (identifier_list_string) identifier_list_string (identifier_replace) identifier_replace )attribute (argument_list (string_"'") string_"'" (string_'"') string_'"' )argument_list )call )assignment )expression_statement (return_statement (call (attribute (identifier_json) identifier_json (identifier_loads) identifier_loads )attribute (argument_list (identifier_json_list) identifier_json_list )argument_list )call )return_statement )block )function_definition )module
Return HTTP method list. Use json for security reasons.
(module (function_definition (function_name_breslauer_corrections) function_name_breslauer_corrections (parameters (identifier_seq) identifier_seq (identifier_pars_error) identifier_pars_error )parameters (block (expression_statement (assignment (identifier_deltas_corr) identifier_deltas_corr (list (integer_0) integer_0 (integer_0) integer_0 )list )assignment )expression_statement (expression_statement (assignment (identifier_contains_gc) identifier_contains_gc (boolean_operator (comparison_operator (string_'G') string_'G' (call (identifier_str) identifier_str (argument_list (identifier_seq) identifier_seq )argument_list )call )comparison_operator (comparison_operator (string_'C') string_'C' (call (identifier_str) identifier_str (argument_list (identifier_seq) identifier_seq )argument_list )call )comparison_operator )boolean_operator )assignment )expression_statement (expression_statement (assignment (identifier_only_at) identifier_only_at (comparison_operator (binary_operator (call (attribute (call (identifier_str) identifier_str (argument_list (identifier_seq) identifier_seq )argument_list )call (identifier_count) identifier_count )attribute (argument_list (string_'A') string_'A' )argument_list )call (call (attribute (call (identifier_str) identifier_str (argument_list (identifier_seq) identifier_seq )argument_list )call (identifier_count) identifier_count )attribute (argument_list (string_'T') string_'T' )argument_list )call )binary_operator (call (identifier_len) identifier_len (argument_list (identifier_seq) identifier_seq )argument_list )call )comparison_operator )assignment )expression_statement (expression_statement (assignment (identifier_symmetric) identifier_symmetric (comparison_operator (identifier_seq) identifier_seq (call (attribute (identifier_seq) identifier_seq (identifier_reverse_complement) identifier_reverse_complement )attribute (argument_list )argument_list )call )comparison_operator )assignment )expression_statement (expression_statement (assignment (identifier_terminal_t) identifier_terminal_t (comparison_operator (subscript (call (identifier_str) identifier_str (argument_list (identifier_seq) identifier_seq )argument_list )call (integer_0) integer_0 )subscript (binary_operator (string_'T') string_'T' (subscript (call (identifier_str) identifier_str (argument_list (identifier_seq) identifier_seq )argument_list )call (unary_operator (integer_1) integer_1 )unary_operator )subscript )binary_operator (string_'T') string_'T' )comparison_operator )assignment )expression_statement (for_statement (pattern_list (identifier_i) identifier_i (identifier_delta) identifier_delta )pattern_list (call (identifier_enumerate) identifier_enumerate (argument_list (list (string_'delta_h') string_'delta_h' (string_'delta_s') string_'delta_s' )list )argument_list )call (block (if_statement (identifier_contains_gc) identifier_contains_gc (block (expression_statement (augmented_assignment (subscript (identifier_deltas_corr) identifier_deltas_corr (identifier_i) identifier_i )subscript (subscript (subscript (identifier_pars_error) identifier_pars_error (identifier_delta) identifier_delta )subscript (string_'anyGC') string_'anyGC' )subscript )augmented_assignment )expression_statement )block )if_statement (if_statement (identifier_only_at) identifier_only_at (block (expression_statement (augmented_assignment (subscript (identifier_deltas_corr) identifier_deltas_corr (identifier_i) identifier_i )subscript (subscript (subscript (identifier_pars_error) identifier_pars_error (identifier_delta) identifier_delta )subscript (string_'onlyAT') string_'onlyAT' )subscript )augmented_assignment )expression_statement )block )if_statement (if_statement (identifier_symmetric) identifier_symmetric (block (expression_statement (augmented_assignment (subscript (identifier_deltas_corr) identifier_deltas_corr (identifier_i) identifier_i )subscript (subscript (subscript (identifier_pars_error) identifier_pars_error (identifier_delta) identifier_delta )subscript (string_'symmetry') string_'symmetry' )subscript )augmented_assignment )expression_statement )block )if_statement (if_statement (boolean_operator (identifier_terminal_t) identifier_terminal_t (comparison_operator (identifier_delta) identifier_delta (string_'delta_h') string_'delta_h' )comparison_operator )boolean_operator (block (expression_statement (augmented_assignment (subscript (identifier_deltas_corr) identifier_deltas_corr (identifier_i) identifier_i )subscript (binary_operator (subscript (subscript (identifier_pars_error) identifier_pars_error (identifier_delta) identifier_delta )subscript (string_'terminalT') string_'terminalT' )subscript (identifier_terminal_t) identifier_terminal_t )binary_operator )augmented_assignment )expression_statement )block )if_statement )block )for_statement (return_statement (identifier_deltas_corr) identifier_deltas_corr )return_statement )block )function_definition )module
Sum corrections for Breslauer '84 method. :param seq: sequence for which to calculate corrections. :type seq: str :param pars_error: dictionary of error corrections :type pars_error: dict :returns: Corrected delta_H and delta_S parameters :rtype: list of floats
(module (function_definition (function_name_get_title) function_name_get_title (parameters (identifier_self) identifier_self (identifier_entry) identifier_entry )parameters (block (expression_statement (assignment (identifier_title) identifier_title (binary_operator (call (identifier__) identifier__ (argument_list (string_'%(title)s (%(word_count)i words)') string_'%(title)s (%(word_count)i words)' )argument_list )call (line_continuation_\) line_continuation_\ (dictionary (pair (string_'title') string_'title' (attribute (identifier_entry) identifier_entry (identifier_title) identifier_title )attribute )pair (pair (string_'word_count') string_'word_count' (attribute (identifier_entry) identifier_entry (identifier_word_count) identifier_word_count )attribute )pair )dictionary )binary_operator )assignment )expression_statement (expression_statement (assignment (identifier_reaction_count) identifier_reaction_count (call (identifier_int) identifier_int (argument_list (binary_operator (binary_operator (attribute (identifier_entry) identifier_entry (identifier_comment_count) identifier_comment_count )attribute (attribute (identifier_entry) identifier_entry (identifier_pingback_count) identifier_pingback_count )attribute )binary_operator (attribute (identifier_entry) identifier_entry (identifier_trackback_count) identifier_trackback_count )attribute )binary_operator )argument_list )call )assignment )expression_statement (if_statement (identifier_reaction_count) identifier_reaction_count (block (return_statement (binary_operator (call (identifier_ungettext_lazy) identifier_ungettext_lazy (argument_list (string_'%(title)s (%(reactions)i reaction)') string_'%(title)s (%(reactions)i reaction)' (string_'%(title)s (%(reactions)i reactions)') string_'%(title)s (%(reactions)i reactions)' (identifier_reaction_count) identifier_reaction_count )argument_list )call (line_continuation_\) line_continuation_\ (dictionary (pair (string_'title') string_'title' (identifier_title) identifier_title )pair (pair (string_'reactions') string_'reactions' (identifier_reaction_count) identifier_reaction_count )pair )dictionary )binary_operator )return_statement )block )if_statement (return_statement (identifier_title) identifier_title )return_statement )block )function_definition )module
Return the title with word count and number of comments.
(module (function_definition (function_name_safe_shake) function_name_safe_shake (parameters (identifier_self) identifier_self (identifier_x) identifier_x (identifier_fun) identifier_fun (identifier_fmax) identifier_fmax )parameters (block (expression_statement (assignment (subscript (attribute (identifier_self) identifier_self (identifier_lock) identifier_lock )attribute (slice (colon) colon )slice )subscript (False) False )assignment )expression_statement (function_definition (function_name_extra_equation) function_name_extra_equation (parameters (identifier_xx) identifier_xx )parameters (block (expression_statement (assignment (pattern_list (identifier_f) identifier_f (identifier_g) identifier_g )pattern_list (call (identifier_fun) identifier_fun (argument_list (identifier_xx) identifier_xx (keyword_argument (identifier_do_gradient) identifier_do_gradient (True) True )keyword_argument )argument_list )call )assignment )expression_statement (return_statement (expression_list (binary_operator (parenthesized_expression (binary_operator (identifier_f) identifier_f (identifier_fmax) identifier_fmax )binary_operator )parenthesized_expression (call (identifier_abs) identifier_abs (argument_list (identifier_fmax) identifier_fmax )argument_list )call )binary_operator (binary_operator (identifier_g) identifier_g (call (identifier_abs) identifier_abs (argument_list (identifier_fmax) identifier_fmax )argument_list )call )binary_operator )expression_list )return_statement )block )function_definition (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_equations) identifier_equations )attribute (identifier_append) identifier_append )attribute (argument_list (tuple (unary_operator (integer_1) integer_1 )unary_operator (identifier_extra_equation) identifier_extra_equation )tuple )argument_list )call )expression_statement (expression_statement (assignment (pattern_list (identifier_x) identifier_x (identifier_shake_counter) identifier_shake_counter (identifier_constraint_couter) identifier_constraint_couter )pattern_list (call (attribute (identifier_self) identifier_self (identifier_free_shake) identifier_free_shake )attribute (argument_list (identifier_x) identifier_x )argument_list )call )assignment )expression_statement (delete_statement (subscript (attribute (identifier_self) identifier_self (identifier_equations) identifier_equations )attribute (unary_operator (integer_1) integer_1 )unary_operator )subscript )delete_statement (return_statement (expression_list (identifier_x) identifier_x (identifier_shake_counter) identifier_shake_counter (identifier_constraint_couter) identifier_constraint_couter )expression_list )return_statement )block )function_definition )module
Brings unknowns to the constraints, without increasing fun above fmax. Arguments: | ``x`` -- The unknowns. | ``fun`` -- The function being minimized. | ``fmax`` -- The highest allowed value of the function being minimized. The function ``fun`` takes a mandatory argument ``x`` and an optional argument ``do_gradient``: | ``x`` -- the arguments of the function to be tested | ``do_gradient`` -- when False, only the function value is returned. when True, a 2-tuple with the function value and the gradient are returned [default=False]
(module (function_definition (function_name__hasViewChangeQuorum) function_name__hasViewChangeQuorum (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_num_of_ready_nodes) identifier_num_of_ready_nodes (call (identifier_len) identifier_len (argument_list (attribute (identifier_self) identifier_self (identifier__view_change_done) identifier__view_change_done )attribute )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_diff) identifier_diff (binary_operator (attribute (identifier_self) identifier_self (identifier_quorum) identifier_quorum )attribute (identifier_num_of_ready_nodes) identifier_num_of_ready_nodes )binary_operator )assignment )expression_statement (if_statement (comparison_operator (identifier_diff) identifier_diff (integer_0) integer_0 )comparison_operator (block (expression_statement (call (attribute (identifier_logger) identifier_logger (identifier_info) identifier_info )attribute (argument_list (call (attribute (string_'{} needs {} ViewChangeDone messages') string_'{} needs {} ViewChangeDone messages' (identifier_format) identifier_format )attribute (argument_list (identifier_self) identifier_self (identifier_diff) identifier_diff )argument_list )call )argument_list )call )expression_statement (return_statement (False) False )return_statement )block )if_statement (expression_statement (call (attribute (identifier_logger) identifier_logger (identifier_info) identifier_info )attribute (argument_list (call (attribute (string_"{} got view change quorum ({} >= {})") string_"{} got view change quorum ({} >= {})" (identifier_format) identifier_format )attribute (argument_list (attribute (identifier_self) identifier_self (identifier_name) identifier_name )attribute (identifier_num_of_ready_nodes) identifier_num_of_ready_nodes (attribute (identifier_self) identifier_self (identifier_quorum) identifier_quorum )attribute )argument_list )call )argument_list )call )expression_statement (return_statement (True) True )return_statement )block )function_definition )module
Checks whether n-f nodes completed view change and whether one of them is the next primary
(module (function_definition (function_name_multiple_packaged_versions) function_name_multiple_packaged_versions (parameters (identifier_package_name) identifier_package_name )parameters (block (expression_statement (assignment (identifier_dist_files) identifier_dist_files (call (attribute (identifier_os) identifier_os (identifier_listdir) identifier_listdir )attribute (argument_list (string_'dist') string_'dist' )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_versions) identifier_versions (call (identifier_set) identifier_set (argument_list )argument_list )call )assignment )expression_statement (for_statement (identifier_filename) identifier_filename (identifier_dist_files) identifier_dist_files (block (expression_statement (assignment (identifier_version) identifier_version (call (attribute (identifier_funcy) identifier_funcy (identifier_re_find) identifier_re_find )attribute (argument_list (call (attribute (string_r'{}-(.+).tar.gz') string_r'{}-(.+).tar.gz' (identifier_format) identifier_format )attribute (argument_list (identifier_package_name) identifier_package_name )argument_list )call (identifier_filename) identifier_filename )argument_list )call )assignment )expression_statement (if_statement (identifier_version) identifier_version (block (expression_statement (call (attribute (identifier_versions) identifier_versions (identifier_add) identifier_add )attribute (argument_list (identifier_version) identifier_version )argument_list )call )expression_statement )block )if_statement )block )for_statement (return_statement (comparison_operator (call (identifier_len) identifier_len (argument_list (identifier_versions) identifier_versions )argument_list )call (integer_1) integer_1 )comparison_operator )return_statement )block )function_definition )module
Look through built package directory and see if there are multiple versions there
(module (function_definition (function_name_get_vault_query_session) function_name_get_vault_query_session (parameters (identifier_self) identifier_self (identifier_proxy) identifier_proxy )parameters (block (if_statement (not_operator (call (attribute (identifier_self) identifier_self (identifier_supports_vault_query) identifier_supports_vault_query )attribute (argument_list )argument_list )call )not_operator (block (raise_statement (call (attribute (identifier_errors) identifier_errors (identifier_Unimplemented) identifier_Unimplemented )attribute (argument_list )argument_list )call )raise_statement )block )if_statement (return_statement (call (attribute (identifier_sessions) identifier_sessions (identifier_VaultQuerySession) identifier_VaultQuerySession )attribute (argument_list (keyword_argument (identifier_proxy) identifier_proxy (identifier_proxy) identifier_proxy )keyword_argument (keyword_argument (identifier_runtime) identifier_runtime (attribute (identifier_self) identifier_self (identifier__runtime) identifier__runtime )attribute )keyword_argument )argument_list )call )return_statement )block )function_definition )module
Gets the OsidSession associated with the vault query service. arg: proxy (osid.proxy.Proxy): a proxy return: (osid.authorization.VaultQuerySession) - a ``VaultQuerySession`` raise: NullArgument - ``proxy`` is ``null`` raise: OperationFailed - unable to complete request raise: Unimplemented - ``supports_vault_query() is false`` *compliance: optional -- This method must be implemented if ``supports_vault_query()`` is true.*
(module (function_definition (function_name_url_unquote_plus) function_name_url_unquote_plus (parameters (identifier_s) identifier_s (default_parameter (identifier_charset) identifier_charset (string_'utf-8') string_'utf-8' )default_parameter (default_parameter (identifier_errors) identifier_errors (string_'replace') string_'replace' )default_parameter )parameters (block (if_statement (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_s) identifier_s (identifier_unicode) identifier_unicode )argument_list )call (block (expression_statement (assignment (identifier_s) identifier_s (call (attribute (identifier_s) identifier_s (identifier_encode) identifier_encode )attribute (argument_list (identifier_charset) identifier_charset )argument_list )call )assignment )expression_statement )block )if_statement (return_statement (call (identifier__decode_unicode) identifier__decode_unicode (argument_list (call (identifier__unquote_plus) identifier__unquote_plus (argument_list (identifier_s) identifier_s )argument_list )call (identifier_charset) identifier_charset (identifier_errors) identifier_errors )argument_list )call )return_statement )block )function_definition )module
URL decode a single string with the given decoding and decode a "+" to whitespace. Per default encoding errors are ignored. If you want a different behavior you can set `errors` to ``'replace'`` or ``'strict'``. In strict mode a `HTTPUnicodeError` is raised. :param s: the string to unquote. :param charset: the charset to be used. :param errors: the error handling for the charset decoding.
(module (function_definition (function_name_set_language) function_name_set_language (parameters (identifier_self) identifier_self (identifier_editor) identifier_editor (identifier_language) identifier_language )parameters (block (expression_statement (call (attribute (identifier_LOGGER) identifier_LOGGER (identifier_debug) identifier_debug )attribute (argument_list (call (attribute (string_"> Setting '{0}' language to '{1}' editor.") string_"> Setting '{0}' language to '{1}' editor." (identifier_format) identifier_format )attribute (argument_list (attribute (identifier_language) identifier_language (identifier_name) identifier_name )attribute (identifier_editor) identifier_editor )argument_list )call )argument_list )call )expression_statement (return_statement (call (attribute (identifier_editor) identifier_editor (identifier_set_language) identifier_set_language )attribute (argument_list (identifier_language) identifier_language )argument_list )call )return_statement )block )function_definition )module
Sets given language to given Model editor. :param editor: Editor to set language to. :type editor: Editor :param language: Language to set. :type language: Language :return: Method success. :rtype: bool
(module (function_definition (function_name_new_logger) function_name_new_logger (parameters (identifier_name) identifier_name )parameters (block (expression_statement (assignment (identifier_log) identifier_log (call (identifier_get_task_logger) identifier_get_task_logger (argument_list (identifier_name) identifier_name )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_handler) identifier_handler (call (attribute (identifier_logstash) identifier_logstash (identifier_LogstashHandler) identifier_LogstashHandler )attribute (argument_list (attribute (attribute (identifier_config) identifier_config (identifier_logstash) identifier_logstash )attribute (identifier_host) identifier_host )attribute (attribute (attribute (identifier_config) identifier_config (identifier_logstash) identifier_logstash )attribute (identifier_port) identifier_port )attribute )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (identifier_log) identifier_log (identifier_addHandler) identifier_addHandler )attribute (argument_list (identifier_handler) identifier_handler )argument_list )call )expression_statement (expression_statement (call (identifier_create_logdir) identifier_create_logdir (argument_list (attribute (identifier_config) identifier_config (identifier_logdir) identifier_logdir )attribute )argument_list )call )expression_statement (expression_statement (assignment (identifier_handler) identifier_handler (call (identifier_TimedRotatingFileHandler) identifier_TimedRotatingFileHandler (argument_list (binary_operator (string_'%s.json') string_'%s.json' (call (identifier_join) identifier_join (argument_list (attribute (identifier_config) identifier_config (identifier_logdir) identifier_logdir )attribute (identifier_name) identifier_name )argument_list )call )binary_operator (keyword_argument (identifier_when) identifier_when (string_'midnight') string_'midnight' )keyword_argument (keyword_argument (identifier_utc) identifier_utc (True) True )keyword_argument )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (identifier_handler) identifier_handler (identifier_setFormatter) identifier_setFormatter )attribute (argument_list (call (identifier_JSONFormatter) identifier_JSONFormatter (argument_list )argument_list )call )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_log) identifier_log (identifier_addHandler) identifier_addHandler )attribute (argument_list (identifier_handler) identifier_handler )argument_list )call )expression_statement (return_statement (call (identifier_TaskCtxAdapter) identifier_TaskCtxAdapter (argument_list (identifier_log) identifier_log (dictionary )dictionary )argument_list )call )return_statement )block )function_definition )module
Return new logger which will log both to logstash and to file in JSON format. Log files are stored in <logdir>/name.json
(module (function_definition (function_name_print_prompt_values) function_name_print_prompt_values (parameters (identifier_values) identifier_values (default_parameter (identifier_message) identifier_message (None) None )default_parameter (default_parameter (identifier_sub_attr) identifier_sub_attr (None) None )default_parameter )parameters (block (if_statement (identifier_message) identifier_message (block (expression_statement (call (identifier_prompt_message) identifier_prompt_message (argument_list (identifier_message) identifier_message )argument_list )call )expression_statement )block )if_statement (for_statement (pattern_list (identifier_index) identifier_index (identifier_entry) identifier_entry )pattern_list (call (identifier_enumerate) identifier_enumerate (argument_list (identifier_values) identifier_values )argument_list )call (block (if_statement (identifier_sub_attr) identifier_sub_attr (block (expression_statement (assignment (identifier_line) identifier_line (call (attribute (string_'{:2d}: {}') string_'{:2d}: {}' (identifier_format) identifier_format )attribute (argument_list (identifier_index) identifier_index (call (identifier_getattr) identifier_getattr (argument_list (call (identifier_utf8) identifier_utf8 (argument_list (identifier_entry) identifier_entry )argument_list )call (identifier_sub_attr) identifier_sub_attr )argument_list )call )argument_list )call )assignment )expression_statement )block (else_clause (block (expression_statement (assignment (identifier_line) identifier_line (call (attribute (string_'{:2d}: {}') string_'{:2d}: {}' (identifier_format) identifier_format )attribute (argument_list (identifier_index) identifier_index (call (identifier_utf8) identifier_utf8 (argument_list (identifier_entry) identifier_entry )argument_list )call )argument_list )call )assignment )expression_statement )block )else_clause )if_statement (with_statement (with_clause (with_item (call (identifier_indent) identifier_indent (argument_list (integer_3) integer_3 )argument_list )call )with_item )with_clause (block (expression_statement (call (identifier_print_message) identifier_print_message (argument_list (identifier_line) identifier_line )argument_list )call )expression_statement )block )with_statement )block )for_statement )block )function_definition )module
Prints prompt title and choices with a bit of formatting.
(module (function_definition (function_name_get_temp_filename) function_name_get_temp_filename (parameters (identifier_content) identifier_content )parameters (block (expression_statement (assignment (pattern_list (identifier_fd) identifier_fd (identifier_filename) identifier_filename )pattern_list (call (attribute (identifier_fileutil) identifier_fileutil (identifier_get_temp_file) identifier_get_temp_file )attribute (argument_list (keyword_argument (identifier_mode) identifier_mode (string_'wb') string_'wb' )keyword_argument (keyword_argument (identifier_suffix) identifier_suffix (string_'.doc') string_'.doc' )keyword_argument (keyword_argument (identifier_prefix) identifier_prefix (string_'lc_') string_'lc_' )keyword_argument )argument_list )call )assignment )expression_statement (try_statement (block (expression_statement (call (attribute (identifier_fd) identifier_fd (identifier_write) identifier_write )attribute (argument_list (identifier_content) identifier_content )argument_list )call )expression_statement )block (finally_clause (block (expression_statement (call (attribute (identifier_fd) identifier_fd (identifier_close) identifier_close )attribute (argument_list )argument_list )call )expression_statement )block )finally_clause )try_statement (return_statement (identifier_filename) identifier_filename )return_statement )block )function_definition )module
Get temporary filename for content to parse.
(module (function_definition (function_name_queryTypesDescriptions) function_name_queryTypesDescriptions (parameters (identifier_self) identifier_self (identifier_types) identifier_types )parameters (block (expression_statement (assignment (identifier_types) identifier_types (call (identifier_list) identifier_list (argument_list (identifier_types) identifier_types )argument_list )call )assignment )expression_statement (if_statement (identifier_types) identifier_types (block (expression_statement (assignment (identifier_types_descs) identifier_types_descs (call (attribute (identifier_self) identifier_self (identifier_describeSObjects) identifier_describeSObjects )attribute (argument_list (identifier_types) identifier_types )argument_list )call )assignment )expression_statement )block (else_clause (block (expression_statement (assignment (identifier_types_descs) identifier_types_descs (list )list )assignment )expression_statement )block )else_clause )if_statement (return_statement (call (identifier_dict) identifier_dict (argument_list (call (identifier_map) identifier_map (argument_list (lambda (lambda_parameters (identifier_t) identifier_t (identifier_d) identifier_d )lambda_parameters (tuple (identifier_t) identifier_t (identifier_d) identifier_d )tuple )lambda (identifier_types) identifier_types (identifier_types_descs) identifier_types_descs )argument_list )call )argument_list )call )return_statement )block )function_definition )module
Given a list of types, construct a dictionary such that each key is a type, and each value is the corresponding sObject for that type.
(module (function_definition (function_name_sort) function_name_sort (parameters (identifier_self) identifier_self (identifier_request) identifier_request (default_parameter (identifier_reverse) identifier_reverse (False) False )default_parameter )parameters (block (return_statement (call (identifier_sorted) identifier_sorted (argument_list (attribute (identifier_self) identifier_self (identifier_collection) identifier_collection )attribute (keyword_argument (identifier_key) identifier_key (lambda (lambda_parameters (identifier_o) identifier_o )lambda_parameters (call (identifier_getattr) identifier_getattr (argument_list (identifier_o) identifier_o (attribute (identifier_self) identifier_self (identifier_columns_sort) identifier_columns_sort )attribute (integer_0) integer_0 )argument_list )call )lambda )keyword_argument (keyword_argument (identifier_reverse) identifier_reverse (identifier_reverse) identifier_reverse )keyword_argument )argument_list )call )return_statement )block )function_definition )module
Sort collection.
(module (function_definition (function_name_is_email) function_name_is_email (parameters (identifier_potential_email_address) identifier_potential_email_address )parameters (block (expression_statement (assignment (pattern_list (identifier_context) identifier_context (identifier_mail) identifier_mail )pattern_list (call (identifier_parseaddr) identifier_parseaddr (argument_list (identifier_potential_email_address) identifier_potential_email_address )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_first_condition) identifier_first_condition (boolean_operator (comparison_operator (call (identifier_len) identifier_len (argument_list (identifier_context) identifier_context )argument_list )call (integer_0) integer_0 )comparison_operator (comparison_operator (call (identifier_len) identifier_len (argument_list (identifier_mail) identifier_mail )argument_list )call (integer_0) integer_0 )comparison_operator )boolean_operator )assignment )expression_statement (expression_statement (assignment (identifier_dot_after_at) identifier_dot_after_at (parenthesized_expression (boolean_operator (comparison_operator (string_'@') string_'@' (identifier_potential_email_address) identifier_potential_email_address )comparison_operator (comparison_operator (string_'.') string_'.' (subscript (call (attribute (identifier_potential_email_address) identifier_potential_email_address (identifier_split) identifier_split )attribute (argument_list (string_'@') string_'@' )argument_list )call (integer_1) integer_1 )subscript )comparison_operator )boolean_operator )parenthesized_expression )assignment )expression_statement (return_statement (boolean_operator (identifier_first_condition) identifier_first_condition (identifier_dot_after_at) identifier_dot_after_at )boolean_operator )return_statement )block )function_definition )module
Check if potential_email_address is a valid e-mail address. Please note that this function has no false-negatives but many false-positives. So if it returns that the input is not a valid e-mail adress, it certainly isn't. If it returns True, it might still be invalid. For example, the domain could not be registered. Parameters ---------- potential_email_address : str Returns ------- is_email : bool Examples -------- >>> is_email('') False >>> is_email('info@martin-thoma.de') True >>> is_email('info@math.martin-thoma.de') True >>> is_email('Martin Thoma <info@martin-thoma.de>') False >>> is_email('info@martin-thoma') False
(module (function_definition (function_name_connection) function_name_connection (parameters (identifier_self) identifier_self (default_parameter (identifier_commit) identifier_commit (False) False )default_parameter )parameters (block (if_statement (identifier_commit) identifier_commit (block (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier__need_commit) identifier__need_commit )attribute (True) True )assignment )expression_statement )block )if_statement (if_statement (attribute (identifier_self) identifier_self (identifier__db) identifier__db )attribute (block (expression_statement (yield (attribute (identifier_self) identifier_self (identifier__db) identifier__db )attribute )yield )expression_statement )block (else_clause (block (try_statement (block (with_statement (with_clause (with_item (as_pattern (call (attribute (identifier_self) identifier_self (identifier__get_db) identifier__get_db )attribute (argument_list )argument_list )call (as_pattern_target (identifier_db) identifier_db )as_pattern_target )as_pattern )with_item )with_clause (block (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier__db) identifier__db )attribute (identifier_db) identifier_db )assignment )expression_statement (expression_statement (call (attribute (identifier_db) identifier_db (identifier_create_function) identifier_create_function )attribute (argument_list (string_"REGEXP") string_"REGEXP" (integer_2) integer_2 (identifier_sql_regexp_func) identifier_sql_regexp_func )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_db) identifier_db (identifier_create_function) identifier_create_function )attribute (argument_list (string_"PROGRAM_NAME") string_"PROGRAM_NAME" (integer_1) integer_1 (identifier_sql_program_name_func) identifier_sql_program_name_func )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_db) identifier_db (identifier_create_function) identifier_create_function )attribute (argument_list (string_"PATHDIST") string_"PATHDIST" (integer_2) integer_2 (identifier_sql_pathdist_func) identifier_sql_pathdist_func )argument_list )call )expression_statement (expression_statement (yield (attribute (identifier_self) identifier_self (identifier__db) identifier__db )attribute )yield )expression_statement (if_statement (attribute (identifier_self) identifier_self (identifier__need_commit) identifier__need_commit )attribute (block (expression_statement (call (attribute (identifier_db) identifier_db (identifier_commit) identifier_commit )attribute (argument_list )argument_list )call )expression_statement )block )if_statement )block )with_statement )block (finally_clause (block (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier__db) identifier__db )attribute (None) None )assignment )expression_statement (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier__need_commit) identifier__need_commit )attribute (False) False )assignment )expression_statement )block )finally_clause )try_statement )block )else_clause )if_statement )block )function_definition )module
Context manager to keep around DB connection. :rtype: sqlite3.Connection SOMEDAY: Get rid of this function. Keeping connection around as an argument to the method using this context manager is probably better as it is more explicit. Also, holding "global state" as instance attribute is bad for supporting threaded search, which is required for more fluent percol integration.
(module (function_definition (function_name__ts_parse) function_name__ts_parse (parameters (identifier_ts) identifier_ts )parameters (block (expression_statement (assignment (identifier_dt) identifier_dt (call (attribute (identifier_datetime) identifier_datetime (identifier_strptime) identifier_strptime )attribute (argument_list (subscript (identifier_ts) identifier_ts (slice (colon) colon (integer_19) integer_19 )slice )subscript (string_"%Y-%m-%dT%H:%M:%S") string_"%Y-%m-%dT%H:%M:%S" )argument_list )call )assignment )expression_statement (if_statement (comparison_operator (subscript (identifier_ts) identifier_ts (integer_19) integer_19 )subscript (string_'+') string_'+' )comparison_operator (block (expression_statement (augmented_assignment (identifier_dt) identifier_dt (call (identifier_timedelta) identifier_timedelta (argument_list (keyword_argument (identifier_hours) identifier_hours (call (identifier_int) identifier_int (argument_list (subscript (identifier_ts) identifier_ts (slice (integer_20) integer_20 (colon) colon (integer_22) integer_22 )slice )subscript )argument_list )call )keyword_argument (keyword_argument (identifier_minutes) identifier_minutes (call (identifier_int) identifier_int (argument_list (subscript (identifier_ts) identifier_ts (slice (integer_23) integer_23 (colon) colon )slice )subscript )argument_list )call )keyword_argument )argument_list )call )augmented_assignment )expression_statement )block (elif_clause (comparison_operator (subscript (identifier_ts) identifier_ts (integer_19) integer_19 )subscript (string_'-') string_'-' )comparison_operator (block (expression_statement (augmented_assignment (identifier_dt) identifier_dt (call (identifier_timedelta) identifier_timedelta (argument_list (keyword_argument (identifier_hours) identifier_hours (call (identifier_int) identifier_int (argument_list (subscript (identifier_ts) identifier_ts (slice (integer_20) integer_20 (colon) colon (integer_22) integer_22 )slice )subscript )argument_list )call )keyword_argument (keyword_argument (identifier_minutes) identifier_minutes (call (identifier_int) identifier_int (argument_list (subscript (identifier_ts) identifier_ts (slice (integer_23) integer_23 (colon) colon )slice )subscript )argument_list )call )keyword_argument )argument_list )call )augmented_assignment )expression_statement )block )elif_clause )if_statement (return_statement (call (attribute (identifier_dt) identifier_dt (identifier_replace) identifier_replace )attribute (argument_list (keyword_argument (identifier_tzinfo) identifier_tzinfo (attribute (identifier_pytz) identifier_pytz (identifier_UTC) identifier_UTC )attribute )keyword_argument )argument_list )call )return_statement )block )function_definition )module
Parse alert timestamp, return UTC datetime object to maintain Python 2 compatibility.
(module (function_definition (function_name_server) function_name_server (parameters (identifier_port) identifier_port )parameters (block (expression_statement (assignment (identifier_args) identifier_args (list (string_'python') string_'python' (string_'manage.py') string_'manage.py' (string_'runserver') string_'runserver' )list )assignment )expression_statement (if_statement (identifier_port) identifier_port (block (expression_statement (call (attribute (identifier_args) identifier_args (identifier_append) identifier_append )attribute (argument_list (identifier_port) identifier_port )argument_list )call )expression_statement )block )if_statement (expression_statement (call (attribute (identifier_run) identifier_run (identifier_main) identifier_main )attribute (argument_list (identifier_args) identifier_args )argument_list )call )expression_statement )block )function_definition )module
Start the Django dev server.
(module (function_definition (function_name__get_subnet_explicit_route_table) function_name__get_subnet_explicit_route_table (parameters (identifier_subnet_id) identifier_subnet_id (identifier_vpc_id) identifier_vpc_id (default_parameter (identifier_conn) identifier_conn (None) None )default_parameter (default_parameter (identifier_region) identifier_region (None) None )default_parameter (default_parameter (identifier_key) identifier_key (None) None )default_parameter (default_parameter (identifier_keyid) identifier_keyid (None) None )default_parameter (default_parameter (identifier_profile) identifier_profile (None) None )default_parameter )parameters (block (if_statement (not_operator (identifier_conn) identifier_conn )not_operator (block (expression_statement (assignment (identifier_conn) identifier_conn (call (identifier__get_conn) identifier__get_conn (argument_list (keyword_argument (identifier_region) identifier_region (identifier_region) identifier_region )keyword_argument (keyword_argument (identifier_key) identifier_key (identifier_key) identifier_key )keyword_argument (keyword_argument (identifier_keyid) identifier_keyid (identifier_keyid) identifier_keyid )keyword_argument (keyword_argument (identifier_profile) identifier_profile (identifier_profile) identifier_profile )keyword_argument )argument_list )call )assignment )expression_statement )block )if_statement (if_statement (identifier_conn) identifier_conn (block (expression_statement (assignment (identifier_vpc_route_tables) identifier_vpc_route_tables (call (attribute (identifier_conn) identifier_conn (identifier_get_all_route_tables) identifier_get_all_route_tables )attribute (argument_list (keyword_argument (identifier_filters) identifier_filters (dictionary (pair (string_'vpc_id') string_'vpc_id' (identifier_vpc_id) identifier_vpc_id )pair )dictionary )keyword_argument )argument_list )call )assignment )expression_statement (for_statement (identifier_vpc_route_table) identifier_vpc_route_table (identifier_vpc_route_tables) identifier_vpc_route_tables (block (for_statement (identifier_rt_association) identifier_rt_association (attribute (identifier_vpc_route_table) identifier_vpc_route_table (identifier_associations) identifier_associations )attribute (block (if_statement (boolean_operator (comparison_operator (attribute (identifier_rt_association) identifier_rt_association (identifier_subnet_id) identifier_subnet_id )attribute (identifier_subnet_id) identifier_subnet_id )comparison_operator (not_operator (attribute (identifier_rt_association) identifier_rt_association (identifier_main) identifier_main )attribute )not_operator )boolean_operator (block (return_statement (attribute (identifier_rt_association) identifier_rt_association (identifier_id) identifier_id )attribute )return_statement )block )if_statement )block )for_statement )block )for_statement )block )if_statement (return_statement (None) None )return_statement )block )function_definition )module
helper function to find subnet explicit route table associations .. versionadded:: 2016.11.0
(module (function_definition (function_name_endswith) function_name_endswith (parameters (identifier_self) identifier_self (identifier_search_str) identifier_search_str )parameters (block (for_statement (identifier_entry) identifier_entry (call (identifier_reversed) identifier_reversed (argument_list (subscript (call (identifier_list) identifier_list (argument_list (call (identifier_open) identifier_open (argument_list (attribute (identifier_self) identifier_self (identifier__jrnl_file) identifier__jrnl_file )attribute (string_'r') string_'r' )argument_list )call )argument_list )call (slice (unary_operator (integer_5) integer_5 )unary_operator (colon) colon )slice )subscript )argument_list )call (block (if_statement (comparison_operator (identifier_search_str) identifier_search_str (identifier_entry) identifier_entry )comparison_operator (block (return_statement (True) True )return_statement )block )if_statement )block )for_statement (return_statement (False) False )return_statement )block )function_definition )module
Check whether the provided string exists in Journal file. Only checks the last 5 lines of the journal file. This method is usually used when tracking a journal from an active Revit session. Args: search_str (str): string to search for Returns: bool: if True the search string is found
(module (function_definition (function_name_load_recipe) function_name_load_recipe (parameters (identifier_self) identifier_self (identifier_recipe) identifier_recipe )parameters (block (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier_recipe) identifier_recipe )attribute (identifier_recipe) identifier_recipe )assignment )expression_statement (for_statement (identifier_module_description) identifier_module_description (subscript (identifier_recipe) identifier_recipe (string_'modules') string_'modules' )subscript (block (expression_statement (assignment (identifier_module_name) identifier_module_name (subscript (identifier_module_description) identifier_module_description (string_'name') string_'name' )subscript )assignment )expression_statement (expression_statement (assignment (identifier_module) identifier_module (call (call (attribute (attribute (identifier_self) identifier_self (identifier_config) identifier_config )attribute (identifier_get_module) identifier_get_module )attribute (argument_list (identifier_module_name) identifier_module_name )argument_list )call (argument_list (identifier_self) identifier_self )argument_list )call )assignment )expression_statement (expression_statement (assignment (subscript (attribute (identifier_self) identifier_self (identifier__module_pool) identifier__module_pool )attribute (identifier_module_name) identifier_module_name )subscript (identifier_module) identifier_module )assignment )expression_statement )block )for_statement )block )function_definition )module
Populates the internal module pool with modules declared in a recipe. Args: recipe: Dict, recipe declaring modules to load.
(module (function_definition (function_name_load_config) function_name_load_config (parameters (identifier_self) identifier_self (identifier_config_file_name) identifier_config_file_name )parameters (block (with_statement (with_clause (with_item (as_pattern (call (identifier_open) identifier_open (argument_list (identifier_config_file_name) identifier_config_file_name )argument_list )call (as_pattern_target (identifier_f) identifier_f )as_pattern_target )as_pattern )with_item )with_clause (block (expression_statement (assignment (identifier_commands) identifier_commands (call (attribute (call (attribute (identifier_f) identifier_f (identifier_read) identifier_read )attribute (argument_list )argument_list )call (identifier_splitlines) identifier_splitlines )attribute (argument_list )argument_list )call )assignment )expression_statement )block )with_statement (for_statement (identifier_command) identifier_command (identifier_commands) identifier_commands (block (if_statement (not_operator (call (attribute (identifier_command) identifier_command (identifier_startswith) identifier_startswith )attribute (argument_list (string_';') string_';' )argument_list )call )not_operator (block (try_statement (block (expression_statement (call (attribute (identifier_self) identifier_self (identifier_send_command) identifier_send_command )attribute (argument_list (identifier_command) identifier_command )argument_list )call )expression_statement )block (except_clause (as_pattern (identifier_XenaCommandException) identifier_XenaCommandException (as_pattern_target (identifier_e) identifier_e )as_pattern_target )as_pattern (block (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_logger) identifier_logger )attribute (identifier_warning) identifier_warning )attribute (argument_list (call (identifier_str) identifier_str (argument_list (identifier_e) identifier_e )argument_list )call )argument_list )call )expression_statement )block )except_clause )try_statement )block )if_statement )block )for_statement )block )function_definition )module
Load configuration file from xpc file. :param config_file_name: full path to the configuration file.
(module (function_definition (function_name_register_array) function_name_register_array (parameters (identifier_self) identifier_self (identifier_name) identifier_name (identifier_shape) identifier_shape (identifier_dtype) identifier_dtype (dictionary_splat_pattern (identifier_kwargs) identifier_kwargs )dictionary_splat_pattern )parameters (block (if_statement (comparison_operator (identifier_name) identifier_name (attribute (identifier_self) identifier_self (identifier__arrays) identifier__arrays )attribute )comparison_operator (block (raise_statement (call (identifier_ValueError) identifier_ValueError (argument_list (binary_operator (parenthesized_expression (concatenated_string (string_'Array %s is already registered ') string_'Array %s is already registered ' (string_'on this cube object.') string_'on this cube object.' )concatenated_string )parenthesized_expression (identifier_name) identifier_name )binary_operator )argument_list )call )raise_statement )block )if_statement (expression_statement (assignment (identifier_A) identifier_A (assignment (subscript (attribute (identifier_self) identifier_self (identifier__arrays) identifier__arrays )attribute (identifier_name) identifier_name )subscript (call (identifier_AttrDict) identifier_AttrDict (argument_list (keyword_argument (identifier_name) identifier_name (identifier_name) identifier_name )keyword_argument (keyword_argument (identifier_dtype) identifier_dtype (identifier_dtype) identifier_dtype )keyword_argument (keyword_argument (identifier_shape) identifier_shape (identifier_shape) identifier_shape )keyword_argument (dictionary_splat (identifier_kwargs) identifier_kwargs )dictionary_splat )argument_list )call )assignment )assignment )expression_statement (return_statement (identifier_A) identifier_A )return_statement )block )function_definition )module
Register an array with this cube. .. code-block:: python cube.register_array("model_vis", ("ntime", "nbl", "nchan", 4), np.complex128) Parameters ---------- name : str Array name shape : A tuple containing either Dimension names or ints Array shape schema dtype : Array data type
(module (function_definition (function_name_business_days) function_name_business_days (parameters (identifier_start) identifier_start (identifier_stop) identifier_stop )parameters (block (expression_statement (assignment (identifier_dates) identifier_dates (call (attribute (identifier_rrule) identifier_rrule (identifier_rruleset) identifier_rruleset )attribute (argument_list )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (identifier_dates) identifier_dates (identifier_rrule) identifier_rrule )attribute (argument_list (call (attribute (identifier_rrule) identifier_rrule (identifier_rrule) identifier_rrule )attribute (argument_list (attribute (identifier_rrule) identifier_rrule (identifier_DAILY) identifier_DAILY )attribute (keyword_argument (identifier_dtstart) identifier_dtstart (identifier_start) identifier_start )keyword_argument (keyword_argument (identifier_until) identifier_until (identifier_stop) identifier_stop )keyword_argument )argument_list )call )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_dates) identifier_dates (identifier_exrule) identifier_exrule )attribute (argument_list (call (attribute (identifier_rrule) identifier_rrule (identifier_rrule) identifier_rrule )attribute (argument_list (attribute (identifier_rrule) identifier_rrule (identifier_DAILY) identifier_DAILY )attribute (keyword_argument (identifier_byweekday) identifier_byweekday (tuple (attribute (identifier_rrule) identifier_rrule (identifier_SA) identifier_SA )attribute (attribute (identifier_rrule) identifier_rrule (identifier_SU) identifier_SU )attribute )tuple )keyword_argument (keyword_argument (identifier_dtstart) identifier_dtstart (identifier_start) identifier_start )keyword_argument )argument_list )call )argument_list )call )expression_statement (return_statement (call (attribute (identifier_dates) identifier_dates (identifier_count) identifier_count )attribute (argument_list )argument_list )call )return_statement )block )function_definition )module
Return business days between two inclusive dates - ignoring public holidays. Note that start must be less than stop or else 0 is returned. @param start: Start date @param stop: Stop date @return int
(module (function_definition (function_name_get_pipeline) function_name_get_pipeline (parameters (typed_parameter (identifier_node) identifier_node (type (identifier_Node) identifier_Node )type )typed_parameter )parameters (type (identifier_RenderingPipeline) identifier_RenderingPipeline )type (block (expression_statement (assignment (identifier_pipeline) identifier_pipeline (call (identifier__get_registered_pipeline) identifier__get_registered_pipeline (argument_list (identifier_node) identifier_node )argument_list )call )assignment )expression_statement (if_statement (comparison_operator (identifier_pipeline) identifier_pipeline (None) None )comparison_operator (block (expression_statement (assignment (identifier_msg) identifier_msg (call (identifier__get_pipeline_registration_error_message) identifier__get_pipeline_registration_error_message (argument_list (identifier_node) identifier_node )argument_list )call )assignment )expression_statement (raise_statement (call (identifier_RenderingError) identifier_RenderingError (argument_list (identifier_msg) identifier_msg )argument_list )call )raise_statement )block )if_statement (return_statement (identifier_pipeline) identifier_pipeline )return_statement )block )function_definition )module
Gets rendering pipeline for passed node
(module (function_definition (function_name__checker_mixer) function_name__checker_mixer (parameters (identifier_slice1) identifier_slice1 (identifier_slice2) identifier_slice2 (default_parameter (identifier_checker_size) identifier_checker_size (None) None )default_parameter )parameters (block (expression_statement (assignment (identifier_checkers) identifier_checkers (call (identifier__get_checkers) identifier__get_checkers (argument_list (attribute (identifier_slice1) identifier_slice1 (identifier_shape) identifier_shape )attribute (identifier_checker_size) identifier_checker_size )argument_list )call )assignment )expression_statement (if_statement (boolean_operator (comparison_operator (attribute (identifier_slice1) identifier_slice1 (identifier_shape) identifier_shape )attribute (attribute (identifier_slice2) identifier_slice2 (identifier_shape) identifier_shape )attribute )comparison_operator (comparison_operator (attribute (identifier_slice2) identifier_slice2 (identifier_shape) identifier_shape )attribute (attribute (identifier_checkers) identifier_checkers (identifier_shape) identifier_shape )attribute )comparison_operator )boolean_operator (block (raise_statement (call (identifier_ValueError) identifier_ValueError (argument_list (string_'size mismatch between cropped slices and checkers!!!') string_'size mismatch between cropped slices and checkers!!!' )argument_list )call )raise_statement )block )if_statement (expression_statement (assignment (identifier_mixed) identifier_mixed (call (attribute (identifier_slice1) identifier_slice1 (identifier_copy) identifier_copy )attribute (argument_list )argument_list )call )assignment )expression_statement (expression_statement (assignment (subscript (identifier_mixed) identifier_mixed (comparison_operator (identifier_checkers) identifier_checkers (integer_0) integer_0 )comparison_operator )subscript (subscript (identifier_slice2) identifier_slice2 (comparison_operator (identifier_checkers) identifier_checkers (integer_0) integer_0 )comparison_operator )subscript )assignment )expression_statement (return_statement (identifier_mixed) identifier_mixed )return_statement )block )function_definition )module
Mixes the two slices in alternating areas specified by checkers
(module (function_definition (function_name_url_encode) function_name_url_encode (parameters (identifier_url) identifier_url )parameters (block (if_statement (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_url) identifier_url (identifier_text_type) identifier_text_type )argument_list )call (block (expression_statement (assignment (identifier_url) identifier_url (call (attribute (identifier_url) identifier_url (identifier_encode) identifier_encode )attribute (argument_list (string_'utf8') string_'utf8' )argument_list )call )assignment )expression_statement )block )if_statement (return_statement (call (identifier_quote) identifier_quote (argument_list (identifier_url) identifier_url (string_':/%?&=') string_':/%?&=' )argument_list )call )return_statement )block )function_definition )module
Convert special characters using %xx escape. :param url: str :return: str - encoded url
(module (function_definition (function_name_to_text) function_name_to_text (parameters (identifier_self) identifier_self )parameters (block (if_statement (comparison_operator (attribute (identifier_self) identifier_self (identifier_text) identifier_text )attribute (string_'') string_'' )comparison_operator (block (return_statement (binary_operator (string_'::%s') string_'::%s' (attribute (identifier_self) identifier_self (identifier_uri) identifier_uri )attribute )binary_operator )return_statement )block )if_statement (return_statement (binary_operator (string_'::%s [%s]') string_'::%s [%s]' (tuple (attribute (identifier_self) identifier_self (identifier_text) identifier_text )attribute (attribute (identifier_self) identifier_self (identifier_uri) identifier_uri )attribute )tuple )binary_operator )return_statement )block )function_definition )module
Render as plain text.
(module (function_definition (function_name_format) function_name_format (parameters (identifier_self) identifier_self )parameters (block (if_statement (call (identifier_hasattr) identifier_hasattr (argument_list (attribute (identifier_self) identifier_self (identifier_image) identifier_image )attribute (string_'_getexif') string_'_getexif' )argument_list )call (block (expression_statement (call (attribute (identifier_self) identifier_self (identifier_rotate_exif) identifier_rotate_exif )attribute (argument_list )argument_list )call )expression_statement )block )if_statement (expression_statement (assignment (identifier_crop_box) identifier_crop_box (call (attribute (identifier_self) identifier_self (identifier_crop_to_ratio) identifier_crop_to_ratio )attribute (argument_list )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (identifier_self) identifier_self (identifier_resize) identifier_resize )attribute (argument_list )argument_list )call )expression_statement (return_statement (expression_list (attribute (identifier_self) identifier_self (identifier_image) identifier_image )attribute (identifier_crop_box) identifier_crop_box )expression_list )return_statement )block )function_definition )module
Crop and resize the supplied image. Return the image and the crop_box used. If the input format is JPEG and in EXIF there is information about rotation, use it and rotate resulting image.
(module (function_definition (function_name_combine_kwargs) function_name_combine_kwargs (parameters (dictionary_splat_pattern (identifier_kwargs) identifier_kwargs )dictionary_splat_pattern )parameters (block (expression_statement (assignment (identifier_combined_kwargs) identifier_combined_kwargs (list )list )assignment )expression_statement (for_statement (pattern_list (identifier_kw) identifier_kw (identifier_arg) identifier_arg )pattern_list (call (attribute (identifier_kwargs) identifier_kwargs (identifier_items) identifier_items )attribute (argument_list )argument_list )call (block (if_statement (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_arg) identifier_arg (identifier_dict) identifier_dict )argument_list )call (block (for_statement (pattern_list (identifier_k) identifier_k (identifier_v) identifier_v )pattern_list (call (attribute (identifier_arg) identifier_arg (identifier_items) identifier_items )attribute (argument_list )argument_list )call (block (for_statement (identifier_tup) identifier_tup (call (identifier_flatten_kwarg) identifier_flatten_kwarg (argument_list (identifier_k) identifier_k (identifier_v) identifier_v )argument_list )call (block (expression_statement (call (attribute (identifier_combined_kwargs) identifier_combined_kwargs (identifier_append) identifier_append )attribute (argument_list (tuple (call (attribute (string_'{}{}') string_'{}{}' (identifier_format) identifier_format )attribute (argument_list (identifier_kw) identifier_kw (subscript (identifier_tup) identifier_tup (integer_0) integer_0 )subscript )argument_list )call (subscript (identifier_tup) identifier_tup (integer_1) integer_1 )subscript )tuple )argument_list )call )expression_statement )block )for_statement )block )for_statement )block (elif_clause (call (identifier_is_multivalued) identifier_is_multivalued (argument_list (identifier_arg) identifier_arg )argument_list )call (block (for_statement (identifier_i) identifier_i (identifier_arg) identifier_arg (block (for_statement (identifier_tup) identifier_tup (call (identifier_flatten_kwarg) identifier_flatten_kwarg (argument_list (string_'') string_'' (identifier_i) identifier_i )argument_list )call (block (expression_statement (call (attribute (identifier_combined_kwargs) identifier_combined_kwargs (identifier_append) identifier_append )attribute (argument_list (tuple (call (attribute (string_'{}{}') string_'{}{}' (identifier_format) identifier_format )attribute (argument_list (identifier_kw) identifier_kw (subscript (identifier_tup) identifier_tup (integer_0) integer_0 )subscript )argument_list )call (subscript (identifier_tup) identifier_tup (integer_1) integer_1 )subscript )tuple )argument_list )call )expression_statement )block )for_statement )block )for_statement )block )elif_clause (else_clause (block (expression_statement (call (attribute (identifier_combined_kwargs) identifier_combined_kwargs (identifier_append) identifier_append )attribute (argument_list (tuple (call (identifier_text_type) identifier_text_type (argument_list (identifier_kw) identifier_kw )argument_list )call (identifier_arg) identifier_arg )tuple )argument_list )call )expression_statement )block )else_clause )if_statement )block )for_statement (return_statement (identifier_combined_kwargs) identifier_combined_kwargs )return_statement )block )function_definition )module
Flatten a series of keyword arguments from complex combinations of dictionaries and lists into a list of tuples representing properly-formatted parameters to pass to the Requester object. :param kwargs: A dictionary containing keyword arguments to be flattened into properly-formatted parameters. :type kwargs: dict :returns: A list of tuples that represent flattened kwargs. The first element is a string representing the key. The second element is the value. :rtype: `list` of `tuple`
(module (function_definition (function_name__get_subject_public_key) function_name__get_subject_public_key (parameters (identifier_cert) identifier_cert )parameters (block (expression_statement (assignment (identifier_public_key) identifier_public_key (call (attribute (identifier_cert) identifier_cert (identifier_get_pubkey) identifier_get_pubkey )attribute (argument_list )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_cryptographic_key) identifier_cryptographic_key (call (attribute (identifier_public_key) identifier_public_key (identifier_to_cryptography_key) identifier_to_cryptography_key )attribute (argument_list )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_subject_public_key) identifier_subject_public_key (call (attribute (identifier_cryptographic_key) identifier_cryptographic_key (identifier_public_bytes) identifier_public_bytes )attribute (argument_list (attribute (identifier_Encoding) identifier_Encoding (identifier_DER) identifier_DER )attribute (attribute (identifier_PublicFormat) identifier_PublicFormat (identifier_PKCS1) identifier_PKCS1 )attribute )argument_list )call )assignment )expression_statement (return_statement (identifier_subject_public_key) identifier_subject_public_key )return_statement )block )function_definition )module
Returns the SubjectPublicKey asn.1 field of the SubjectPublicKeyInfo field of the server's certificate. This is used in the server verification steps to thwart MitM attacks. :param cert: X509 certificate from pyOpenSSL .get_peer_certificate() :return: byte string of the asn.1 DER encoded SubjectPublicKey field
(module (function_definition (function_name_limit) function_name_limit (parameters (identifier_self) identifier_self (identifier_value) identifier_value )parameters (block (expression_statement (assignment (attribute (identifier_self) identifier_self (identifier__query) identifier__query )attribute (call (attribute (attribute (identifier_self) identifier_self (identifier__query) identifier__query )attribute (identifier_limit) identifier_limit )attribute (argument_list (identifier_value) identifier_value )argument_list )call )assignment )expression_statement (return_statement (identifier_self) identifier_self )return_statement )block )function_definition )module
Allows for limiting number of results returned for query. Useful for pagination.
(module (function_definition (function_name_list_private_repos) function_name_list_private_repos (parameters (default_parameter (identifier_profile) identifier_profile (string_'github') string_'github' )default_parameter )parameters (block (expression_statement (assignment (identifier_repos) identifier_repos (list )list )assignment )expression_statement (for_statement (identifier_repo) identifier_repo (call (identifier__get_repos) identifier__get_repos (argument_list (identifier_profile) identifier_profile )argument_list )call (block (if_statement (comparison_operator (attribute (identifier_repo) identifier_repo (identifier_private) identifier_private )attribute (True) True )comparison_operator (block (expression_statement (call (attribute (identifier_repos) identifier_repos (identifier_append) identifier_append )attribute (argument_list (attribute (identifier_repo) identifier_repo (identifier_name) identifier_name )attribute )argument_list )call )expression_statement )block )if_statement )block )for_statement (return_statement (identifier_repos) identifier_repos )return_statement )block )function_definition )module
List private repositories within the organization. Dependent upon the access rights of the profile token. .. versionadded:: 2016.11.0 profile The name of the profile configuration to use. Defaults to ``github``. CLI Example: .. code-block:: bash salt myminion github.list_private_repos salt myminion github.list_private_repos profile='my-github-profile'
(module (function_definition (function_name_map) function_name_map (parameters (identifier_self) identifier_self (identifier_f) identifier_f (default_parameter (identifier_preservesPartitioning) identifier_preservesPartitioning (False) False )default_parameter )parameters (block (return_statement (parenthesized_expression (call (attribute (call (attribute (identifier_self) identifier_self (identifier_mapPartitions) identifier_mapPartitions )attribute (argument_list (lambda (lambda_parameters (identifier_p) identifier_p )lambda_parameters (generator_expression (call (identifier_f) identifier_f (argument_list (identifier_e) identifier_e )argument_list )call (for_in_clause (identifier_e) identifier_e (identifier_p) identifier_p )for_in_clause )generator_expression )lambda (identifier_preservesPartitioning) identifier_preservesPartitioning )argument_list )call (identifier_transform) identifier_transform )attribute (argument_list (lambda (lambda_parameters (identifier_rdd) identifier_rdd )lambda_parameters (call (attribute (identifier_rdd) identifier_rdd (identifier_setName) identifier_setName )attribute (argument_list (call (attribute (string_'{}:{}') string_'{}:{}' (identifier_format) identifier_format )attribute (argument_list (call (attribute (attribute (identifier_rdd) identifier_rdd (identifier_prev) identifier_prev )attribute (identifier_name) identifier_name )attribute (argument_list )argument_list )call (identifier_f) identifier_f )argument_list )call )argument_list )call )lambda )argument_list )call )parenthesized_expression )return_statement )block )function_definition )module
Apply function f :param f: mapping function :rtype: DStream Example: >>> import pysparkling >>> sc = pysparkling.Context() >>> ssc = pysparkling.streaming.StreamingContext(sc, 0.1) >>> ( ... ssc ... .queueStream([[4], [2], [7]]) ... .map(lambda e: e + 1) ... .foreachRDD(lambda rdd: print(rdd.collect())) ... ) >>> ssc.start() >>> ssc.awaitTermination(0.35) [5] [3] [8]
(module (function_definition (function_name_with_name) function_name_with_name (parameters (identifier_cls) identifier_cls (identifier_name) identifier_name (default_parameter (identifier_id_user) identifier_id_user (integer_0) integer_0 )default_parameter (dictionary_splat_pattern (identifier_extra_data) identifier_extra_data )dictionary_splat_pattern )parameters (block (return_statement (call (identifier_cls) identifier_cls (argument_list (keyword_argument (identifier_name) identifier_name (identifier_name) identifier_name )keyword_argument (keyword_argument (identifier_id_user) identifier_id_user (integer_0) integer_0 )keyword_argument (dictionary_splat (identifier_extra_data) identifier_extra_data )dictionary_splat )argument_list )call )return_statement )block )function_definition )module
Instantiate a WorkflowEngine given a name or UUID. :param name: name of workflow to run. :type name: str :param id_user: id of user to associate with workflow :type id_user: int :param module_name: label used to query groups of workflows. :type module_name: str
(module (function_definition (function_name_cv_error) function_name_cv_error (parameters (identifier_self) identifier_self (default_parameter (identifier_cv) identifier_cv (True) True )default_parameter (default_parameter (identifier_skip_endpoints) identifier_skip_endpoints (True) True )default_parameter )parameters (block (expression_statement (assignment (identifier_resids) identifier_resids (call (attribute (identifier_self) identifier_self (identifier_cv_residuals) identifier_cv_residuals )attribute (argument_list (identifier_cv) identifier_cv )argument_list )call )assignment )expression_statement (if_statement (identifier_skip_endpoints) identifier_skip_endpoints (block (expression_statement (assignment (identifier_resids) identifier_resids (subscript (identifier_resids) identifier_resids (slice (integer_1) integer_1 (colon) colon (unary_operator (integer_1) integer_1 )unary_operator )slice )subscript )assignment )expression_statement )block )if_statement (return_statement (call (attribute (identifier_np) identifier_np (identifier_mean) identifier_mean )attribute (argument_list (call (identifier_abs) identifier_abs (argument_list (identifier_resids) identifier_resids )argument_list )call )argument_list )call )return_statement )block )function_definition )module
Return the sum of cross-validation residuals for the input data
(module (function_definition (function_name_decodes) function_name_decodes (parameters (identifier_self) identifier_self (typed_parameter (identifier_s) identifier_s (type (identifier_str) identifier_str )type )typed_parameter )parameters (type (identifier_BioCCollection) identifier_BioCCollection )type (block (expression_statement (assignment (identifier_tree) identifier_tree (call (attribute (identifier_etree) identifier_etree (identifier_parse) identifier_parse )attribute (argument_list (call (attribute (identifier_io) identifier_io (identifier_BytesIO) identifier_BytesIO )attribute (argument_list (call (identifier_bytes) identifier_bytes (argument_list (identifier_s) identifier_s (keyword_argument (identifier_encoding) identifier_encoding (string_'UTF-8') string_'UTF-8' )keyword_argument )argument_list )call )argument_list )call )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_collection) identifier_collection (call (attribute (identifier_self) identifier_self (identifier___parse_collection) identifier___parse_collection )attribute (argument_list (call (attribute (identifier_tree) identifier_tree (identifier_getroot) identifier_getroot )attribute (argument_list )argument_list )call )argument_list )call )assignment )expression_statement (expression_statement (assignment (attribute (identifier_collection) identifier_collection (identifier_encoding) identifier_encoding )attribute (attribute (attribute (identifier_tree) identifier_tree (identifier_docinfo) identifier_docinfo )attribute (identifier_encoding) identifier_encoding )attribute )assignment )expression_statement (expression_statement (assignment (attribute (identifier_collection) identifier_collection (identifier_standalone) identifier_standalone )attribute (attribute (attribute (identifier_tree) identifier_tree (identifier_docinfo) identifier_docinfo )attribute (identifier_standalone) identifier_standalone )attribute )assignment )expression_statement (expression_statement (assignment (attribute (identifier_collection) identifier_collection (identifier_version) identifier_version )attribute (attribute (attribute (identifier_tree) identifier_tree (identifier_docinfo) identifier_docinfo )attribute (identifier_xml_version) identifier_xml_version )attribute )assignment )expression_statement (return_statement (identifier_collection) identifier_collection )return_statement )block )function_definition )module
Deserialize ``s`` to a BioC collection object. Args: s: a "str" instance containing a BioC collection Returns: an object of BioCollection
(module (function_definition (function_name_create_guest_screen_info) function_name_create_guest_screen_info (parameters (identifier_self) identifier_self (identifier_display) identifier_display (identifier_status) identifier_status (identifier_primary) identifier_primary (identifier_change_origin) identifier_change_origin (identifier_origin_x) identifier_origin_x (identifier_origin_y) identifier_origin_y (identifier_width) identifier_width (identifier_height) identifier_height (identifier_bits_per_pixel) identifier_bits_per_pixel )parameters (block (if_statement (not_operator (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_display) identifier_display (identifier_baseinteger) identifier_baseinteger )argument_list )call )not_operator (block (raise_statement (call (identifier_TypeError) identifier_TypeError (argument_list (string_"display can only be an instance of type baseinteger") string_"display can only be an instance of type baseinteger" )argument_list )call )raise_statement )block )if_statement (if_statement (not_operator (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_status) identifier_status (identifier_GuestMonitorStatus) identifier_GuestMonitorStatus )argument_list )call )not_operator (block (raise_statement (call (identifier_TypeError) identifier_TypeError (argument_list (string_"status can only be an instance of type GuestMonitorStatus") string_"status can only be an instance of type GuestMonitorStatus" )argument_list )call )raise_statement )block )if_statement (if_statement (not_operator (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_primary) identifier_primary (identifier_bool) identifier_bool )argument_list )call )not_operator (block (raise_statement (call (identifier_TypeError) identifier_TypeError (argument_list (string_"primary can only be an instance of type bool") string_"primary can only be an instance of type bool" )argument_list )call )raise_statement )block )if_statement (if_statement (not_operator (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_change_origin) identifier_change_origin (identifier_bool) identifier_bool )argument_list )call )not_operator (block (raise_statement (call (identifier_TypeError) identifier_TypeError (argument_list (string_"change_origin can only be an instance of type bool") string_"change_origin can only be an instance of type bool" )argument_list )call )raise_statement )block )if_statement (if_statement (not_operator (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_origin_x) identifier_origin_x (identifier_baseinteger) identifier_baseinteger )argument_list )call )not_operator (block (raise_statement (call (identifier_TypeError) identifier_TypeError (argument_list (string_"origin_x can only be an instance of type baseinteger") string_"origin_x can only be an instance of type baseinteger" )argument_list )call )raise_statement )block )if_statement (if_statement (not_operator (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_origin_y) identifier_origin_y (identifier_baseinteger) identifier_baseinteger )argument_list )call )not_operator (block (raise_statement (call (identifier_TypeError) identifier_TypeError (argument_list (string_"origin_y can only be an instance of type baseinteger") string_"origin_y can only be an instance of type baseinteger" )argument_list )call )raise_statement )block )if_statement (if_statement (not_operator (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_width) identifier_width (identifier_baseinteger) identifier_baseinteger )argument_list )call )not_operator (block (raise_statement (call (identifier_TypeError) identifier_TypeError (argument_list (string_"width can only be an instance of type baseinteger") string_"width can only be an instance of type baseinteger" )argument_list )call )raise_statement )block )if_statement (if_statement (not_operator (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_height) identifier_height (identifier_baseinteger) identifier_baseinteger )argument_list )call )not_operator (block (raise_statement (call (identifier_TypeError) identifier_TypeError (argument_list (string_"height can only be an instance of type baseinteger") string_"height can only be an instance of type baseinteger" )argument_list )call )raise_statement )block )if_statement (if_statement (not_operator (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_bits_per_pixel) identifier_bits_per_pixel (identifier_baseinteger) identifier_baseinteger )argument_list )call )not_operator (block (raise_statement (call (identifier_TypeError) identifier_TypeError (argument_list (string_"bits_per_pixel can only be an instance of type baseinteger") string_"bits_per_pixel can only be an instance of type baseinteger" )argument_list )call )raise_statement )block )if_statement (expression_statement (assignment (identifier_guest_screen_info) identifier_guest_screen_info (call (attribute (identifier_self) identifier_self (identifier__call) identifier__call )attribute (argument_list (string_"createGuestScreenInfo") string_"createGuestScreenInfo" (keyword_argument (identifier_in_p) identifier_in_p (list (identifier_display) identifier_display (identifier_status) identifier_status (identifier_primary) identifier_primary (identifier_change_origin) identifier_change_origin (identifier_origin_x) identifier_origin_x (identifier_origin_y) identifier_origin_y (identifier_width) identifier_width (identifier_height) identifier_height (identifier_bits_per_pixel) identifier_bits_per_pixel )list )keyword_argument )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_guest_screen_info) identifier_guest_screen_info (call (identifier_IGuestScreenInfo) identifier_IGuestScreenInfo (argument_list (identifier_guest_screen_info) identifier_guest_screen_info )argument_list )call )assignment )expression_statement (return_statement (identifier_guest_screen_info) identifier_guest_screen_info )return_statement )block )function_definition )module
Make a IGuestScreenInfo object with the provided parameters. in display of type int The number of the guest display. in status of type :class:`GuestMonitorStatus` @c True, if this guest screen is enabled, @c False otherwise. in primary of type bool Whether this guest monitor must be primary. in change_origin of type bool @c True, if the origin of the guest screen should be changed, @c False otherwise. in origin_x of type int The X origin of the guest screen. in origin_y of type int The Y origin of the guest screen. in width of type int The width of the guest screen. in height of type int The height of the guest screen. in bits_per_pixel of type int The number of bits per pixel of the guest screen. return guest_screen_info of type :class:`IGuestScreenInfo` The created object.
(module (function_definition (function_name_customer_gateway_exists) function_name_customer_gateway_exists (parameters (default_parameter (identifier_customer_gateway_id) identifier_customer_gateway_id (None) None )default_parameter (default_parameter (identifier_customer_gateway_name) identifier_customer_gateway_name (None) None )default_parameter (default_parameter (identifier_region) identifier_region (None) None )default_parameter (default_parameter (identifier_key) identifier_key (None) None )default_parameter (default_parameter (identifier_keyid) identifier_keyid (None) None )default_parameter (default_parameter (identifier_profile) identifier_profile (None) None )default_parameter )parameters (block (return_statement (call (identifier_resource_exists) identifier_resource_exists (argument_list (string_'customer_gateway') string_'customer_gateway' (keyword_argument (identifier_name) identifier_name (identifier_customer_gateway_name) identifier_customer_gateway_name )keyword_argument (keyword_argument (identifier_resource_id) identifier_resource_id (identifier_customer_gateway_id) identifier_customer_gateway_id )keyword_argument (keyword_argument (identifier_region) identifier_region (identifier_region) identifier_region )keyword_argument (keyword_argument (identifier_key) identifier_key (identifier_key) identifier_key )keyword_argument (keyword_argument (identifier_keyid) identifier_keyid (identifier_keyid) identifier_keyid )keyword_argument (keyword_argument (identifier_profile) identifier_profile (identifier_profile) identifier_profile )keyword_argument )argument_list )call )return_statement )block )function_definition )module
Given a customer gateway ID, check if the customer gateway ID exists. Returns True if the customer gateway ID exists; Returns False otherwise. CLI Example: .. code-block:: bash salt myminion boto_vpc.customer_gateway_exists cgw-b6a247df salt myminion boto_vpc.customer_gateway_exists customer_gatway_name=mycgw
(module (function_definition (function_name_subdomain) function_name_subdomain (parameters (identifier_self) identifier_self (identifier_hostname) identifier_hostname )parameters (block (expression_statement (assignment (identifier_hostname) identifier_hostname (subscript (call (attribute (identifier_hostname) identifier_hostname (identifier_split) identifier_split )attribute (argument_list (string_":") string_":" )argument_list )call (integer_0) integer_0 )subscript )assignment )expression_statement (for_statement (identifier_domain) identifier_domain (call (identifier_getDomainNames) identifier_getDomainNames (argument_list (attribute (identifier_self) identifier_self (identifier_siteStore) identifier_siteStore )attribute )argument_list )call (block (if_statement (call (attribute (identifier_hostname) identifier_hostname (identifier_endswith) identifier_endswith )attribute (argument_list (binary_operator (string_".") string_"." (identifier_domain) identifier_domain )binary_operator )argument_list )call (block (expression_statement (assignment (identifier_username) identifier_username (subscript (identifier_hostname) identifier_hostname (slice (colon) colon (binary_operator (unary_operator (call (identifier_len) identifier_len (argument_list (identifier_domain) identifier_domain )argument_list )call )unary_operator (integer_1) integer_1 )binary_operator )slice )subscript )assignment )expression_statement (if_statement (comparison_operator (identifier_username) identifier_username (string_"www") string_"www" )comparison_operator (block (return_statement (expression_list (identifier_username) identifier_username (identifier_domain) identifier_domain )expression_list )return_statement )block )if_statement )block )if_statement )block )for_statement (return_statement (None) None )return_statement )block )function_definition )module
Determine of which known domain the given hostname is a subdomain. @return: A two-tuple giving the subdomain part and the domain part or C{None} if the domain is not a subdomain of any known domain.
(module (function_definition (function_name_intervention) function_name_intervention (parameters (identifier_self) identifier_self (identifier_commit) identifier_commit (identifier_conf) identifier_conf )parameters (block (if_statement (boolean_operator (not_operator (attribute (attribute (identifier_conf) identifier_conf (identifier_harpoon) identifier_harpoon )attribute (identifier_interactive) identifier_interactive )attribute )not_operator (attribute (attribute (identifier_conf) identifier_conf (identifier_harpoon) identifier_harpoon )attribute (identifier_no_intervention) identifier_no_intervention )attribute )boolean_operator (block (expression_statement (yield )yield )expression_statement (return_statement )return_statement )block )if_statement (expression_statement (call (attribute (identifier_hp) identifier_hp (identifier_write_to) identifier_write_to )attribute (argument_list (attribute (attribute (identifier_conf) identifier_conf (identifier_harpoon) identifier_harpoon )attribute (identifier_stdout) identifier_stdout )attribute (string_"!!!!\n") string_"!!!!\n" )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_hp) identifier_hp (identifier_write_to) identifier_write_to )attribute (argument_list (attribute (attribute (identifier_conf) identifier_conf (identifier_harpoon) identifier_harpoon )attribute (identifier_stdout) identifier_stdout )attribute (string_"It would appear building the image failed\n") string_"It would appear building the image failed\n" )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_hp) identifier_hp (identifier_write_to) identifier_write_to )attribute (argument_list (attribute (attribute (identifier_conf) identifier_conf (identifier_harpoon) identifier_harpoon )attribute (identifier_stdout) identifier_stdout )attribute (call (attribute (string_"Do you want to run {0} where the build to help debug why it failed?\n") string_"Do you want to run {0} where the build to help debug why it failed?\n" (identifier_format) identifier_format )attribute (argument_list (attribute (identifier_conf) identifier_conf (identifier_resolved_shell) identifier_resolved_shell )attribute )argument_list )call )argument_list )call )expression_statement (expression_statement (call (attribute (attribute (attribute (identifier_conf) identifier_conf (identifier_harpoon) identifier_harpoon )attribute (identifier_stdout) identifier_stdout )attribute (identifier_flush) identifier_flush )attribute (argument_list )argument_list )call )expression_statement (expression_statement (assignment (identifier_answer) identifier_answer (call (identifier_input) identifier_input (argument_list (string_"[y]: ") string_"[y]: " )argument_list )call )assignment )expression_statement (if_statement (boolean_operator (identifier_answer) identifier_answer (not_operator (call (attribute (call (attribute (identifier_answer) identifier_answer (identifier_lower) identifier_lower )attribute (argument_list )argument_list )call (identifier_startswith) identifier_startswith )attribute (argument_list (string_"y") string_"y" )argument_list )call )not_operator )boolean_operator (block (expression_statement (yield )yield )expression_statement (return_statement )return_statement )block )if_statement (with_statement (with_clause (with_item (call (attribute (identifier_self) identifier_self (identifier_commit_and_run) identifier_commit_and_run )attribute (argument_list (identifier_commit) identifier_commit (identifier_conf) identifier_conf (keyword_argument (identifier_command) identifier_command (attribute (identifier_conf) identifier_conf (identifier_resolved_shell) identifier_resolved_shell )attribute )keyword_argument )argument_list )call )with_item )with_clause (block (expression_statement (yield )yield )expression_statement )block )with_statement )block )function_definition )module
Ask the user if they want to commit this container and run sh in it
(module (function_definition (function_name__put_chunk) function_name__put_chunk (parameters (identifier_cls) identifier_cls (typed_parameter (identifier_session) identifier_session (type (attribute (identifier_aiohttp) identifier_aiohttp (identifier_ClientSession) identifier_ClientSession )attribute )type )typed_parameter (typed_parameter (identifier_upload_uri) identifier_upload_uri (type (identifier_str) identifier_str )type )typed_parameter (typed_parameter (identifier_buf) identifier_buf (type (identifier_bytes) identifier_bytes )type )typed_parameter )parameters (block (expression_statement (assignment (identifier_headers) identifier_headers (dictionary (pair (string_'Content-Type') string_'Content-Type' (string_'application/octet-stream') string_'application/octet-stream' )pair (pair (string_'Content-Length') string_'Content-Length' (binary_operator (string_'%s') string_'%s' (call (identifier_len) identifier_len (argument_list (identifier_buf) identifier_buf )argument_list )call )binary_operator )pair )dictionary )assignment )expression_statement (expression_statement (assignment (identifier_credentials) identifier_credentials (attribute (attribute (attribute (identifier_cls) identifier_cls (identifier__handler) identifier__handler )attribute (identifier_session) identifier_session )attribute (identifier_credentials) identifier_credentials )attribute )assignment )expression_statement (if_statement (comparison_operator (identifier_credentials) identifier_credentials (None) None )comparison_operator (block (expression_statement (call (attribute (identifier_utils) identifier_utils (identifier_sign) identifier_sign )attribute (argument_list (identifier_upload_uri) identifier_upload_uri (identifier_headers) identifier_headers (identifier_credentials) identifier_credentials )argument_list )call )expression_statement )block )if_statement (with_statement (with_clause (with_item (as_pattern (await (call (attribute (identifier_session) identifier_session (identifier_put) identifier_put )attribute (argument_list (identifier_upload_uri) identifier_upload_uri (keyword_argument (identifier_data) identifier_data (identifier_buf) identifier_buf )keyword_argument (keyword_argument (identifier_headers) identifier_headers (identifier_headers) identifier_headers )keyword_argument )argument_list )call )await (as_pattern_target (identifier_response) identifier_response )as_pattern_target )as_pattern )with_item )with_clause (block (if_statement (comparison_operator (attribute (identifier_response) identifier_response (identifier_status) identifier_status )attribute (integer_200) integer_200 )comparison_operator (block (expression_statement (assignment (identifier_content) identifier_content (await (call (attribute (identifier_response) identifier_response (identifier_read) identifier_read )attribute (argument_list )argument_list )call )await )assignment )expression_statement (expression_statement (assignment (identifier_request) identifier_request (dictionary (pair (string_"body") string_"body" (identifier_buf) identifier_buf )pair (pair (string_"headers") string_"headers" (identifier_headers) identifier_headers )pair (pair (string_"method") string_"method" (string_"PUT") string_"PUT" )pair (pair (string_"uri") string_"uri" (identifier_upload_uri) identifier_upload_uri )pair )dictionary )assignment )expression_statement (raise_statement (call (identifier_CallError) identifier_CallError (argument_list (identifier_request) identifier_request (identifier_response) identifier_response (identifier_content) identifier_content (None) None )argument_list )call )raise_statement )block )if_statement )block )with_statement )block )function_definition )module
Upload one chunk to `upload_uri`.
(module (function_definition (function_name__ensure_tuple_or_list) function_name__ensure_tuple_or_list (parameters (identifier_arg_name) identifier_arg_name (identifier_tuple_or_list) identifier_tuple_or_list )parameters (block (if_statement (not_operator (call (identifier_isinstance) identifier_isinstance (argument_list (identifier_tuple_or_list) identifier_tuple_or_list (tuple (identifier_tuple) identifier_tuple (identifier_list) identifier_list )tuple )argument_list )call )not_operator (block (raise_statement (call (identifier_TypeError) identifier_TypeError (argument_list (binary_operator (concatenated_string (string_"Expected %s to be a tuple or list. ") string_"Expected %s to be a tuple or list. " (string_"Received %r") string_"Received %r" )concatenated_string (tuple (identifier_arg_name) identifier_arg_name (identifier_tuple_or_list) identifier_tuple_or_list )tuple )binary_operator )argument_list )call )raise_statement )block )if_statement (return_statement (call (identifier_list) identifier_list (argument_list (identifier_tuple_or_list) identifier_tuple_or_list )argument_list )call )return_statement )block )function_definition )module
Ensures an input is a tuple or list. This effectively reduces the iterable types allowed to a very short whitelist: list and tuple. :type arg_name: str :param arg_name: Name of argument to use in error message. :type tuple_or_list: sequence of str :param tuple_or_list: Sequence to be verified. :rtype: list of str :returns: The ``tuple_or_list`` passed in cast to a ``list``. :raises TypeError: if the ``tuple_or_list`` is not a tuple or list.
(module (function_definition (function_name_multi_rpush) function_name_multi_rpush (parameters (identifier_self) identifier_self (identifier_queue) identifier_queue (identifier_values) identifier_values (default_parameter (identifier_bulk_size) identifier_bulk_size (integer_0) integer_0 )default_parameter (default_parameter (identifier_transaction) identifier_transaction (False) False )default_parameter )parameters (block (if_statement (call (identifier_hasattr) identifier_hasattr (argument_list (identifier_values) identifier_values (string_'__iter__') string_'__iter__' )argument_list )call (block (expression_statement (assignment (identifier_pipe) identifier_pipe (call (attribute (identifier_self) identifier_self (identifier_pipeline) identifier_pipeline )attribute (argument_list (keyword_argument (identifier_transaction) identifier_transaction (identifier_transaction) identifier_transaction )keyword_argument )argument_list )call )assignment )expression_statement (expression_statement (call (attribute (identifier_pipe) identifier_pipe (identifier_multi) identifier_multi )attribute (argument_list )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_self) identifier_self (identifier__multi_rpush_pipeline) identifier__multi_rpush_pipeline )attribute (argument_list (identifier_pipe) identifier_pipe (identifier_queue) identifier_queue (identifier_values) identifier_values (identifier_bulk_size) identifier_bulk_size )argument_list )call )expression_statement (expression_statement (call (attribute (identifier_pipe) identifier_pipe (identifier_execute) identifier_execute )attribute (argument_list )argument_list )call )expression_statement )block (else_clause (block (raise_statement (call (identifier_ValueError) identifier_ValueError (argument_list (string_'Expected an iterable') string_'Expected an iterable' )argument_list )call )raise_statement )block )else_clause )if_statement )block )function_definition )module
Pushes multiple elements to a list If bulk_size is set it will execute the pipeline every bulk_size elements This operation will be atomic if transaction=True is passed
(module (function_definition (function_name_scale_subplots) function_name_scale_subplots (parameters (default_parameter (identifier_subplots) identifier_subplots (None) None )default_parameter (default_parameter (identifier_xlim) identifier_xlim (string_'auto') string_'auto' )default_parameter (default_parameter (identifier_ylim) identifier_ylim (string_'auto') string_'auto' )default_parameter )parameters (block (expression_statement (assignment (identifier_auto_axis) identifier_auto_axis (string_'') string_'' )assignment )expression_statement (if_statement (comparison_operator (identifier_xlim) identifier_xlim (string_'auto') string_'auto' )comparison_operator (block (expression_statement (augmented_assignment (identifier_auto_axis) identifier_auto_axis (string_'x') string_'x' )augmented_assignment )expression_statement )block )if_statement (if_statement (comparison_operator (identifier_ylim) identifier_ylim (string_'auto') string_'auto' )comparison_operator (block (expression_statement (augmented_assignment (identifier_auto_axis) identifier_auto_axis (string_'y') string_'y' )augmented_assignment )expression_statement )block )if_statement (expression_statement (call (identifier_autoscale_subplots) identifier_autoscale_subplots (argument_list (identifier_subplots) identifier_subplots (identifier_auto_axis) identifier_auto_axis )argument_list )call )expression_statement (for_statement (pattern_list (identifier_loc) identifier_loc (identifier_ax) identifier_ax )pattern_list (call (attribute (identifier_numpy) identifier_numpy (identifier_ndenumerate) identifier_ndenumerate )attribute (argument_list (identifier_subplots) identifier_subplots )argument_list )call (block (if_statement (comparison_operator (string_'x') string_'x' (identifier_auto_axis) identifier_auto_axis )comparison_operator (block (expression_statement (call (attribute (identifier_ax) identifier_ax (identifier_set_xlim) identifier_set_xlim )attribute (argument_list (identifier_xlim) identifier_xlim )argument_list )call )expression_statement )block )if_statement (if_statement (comparison_operator (string_'y') string_'y' (identifier_auto_axis) identifier_auto_axis )comparison_operator (block (expression_statement (call (attribute (identifier_ax) identifier_ax (identifier_set_ylim) identifier_set_ylim )attribute (argument_list (identifier_ylim) identifier_ylim )argument_list )call )expression_statement )block )if_statement )block )for_statement )block )function_definition )module
Set the x and y axis limits for a collection of subplots. Parameters ----------- subplots : ndarray or list of matplotlib.axes.Axes xlim : None | 'auto' | (xmin, xmax) 'auto' : sets the limits according to the most extreme values of data encountered. ylim : None | 'auto' | (ymin, ymax)
(module (function_definition (function_name_add) function_name_add (parameters (identifier_self) identifier_self (identifier_src) identifier_src )parameters (block (if_statement (not_operator (call (attribute (identifier_audio) identifier_audio (identifier_get_type) identifier_get_type )attribute (argument_list (identifier_src) identifier_src )argument_list )call )not_operator (block (raise_statement (call (identifier_TypeError) identifier_TypeError (argument_list (string_'The type of this file is not supported.') string_'The type of this file is not supported.' )argument_list )call )raise_statement )block )if_statement (return_statement (call (attribute (call (identifier_super) identifier_super (argument_list )argument_list )call (identifier_add) identifier_add )attribute (argument_list (identifier_src) identifier_src )argument_list )call )return_statement )block )function_definition )module
store an audio file to storage dir :param src: audio file path :return: checksum value
(module (function_definition (function_name_newline) function_name_newline (parameters (identifier_self) identifier_self (list_splat_pattern (identifier_args) identifier_args )list_splat_pattern (dictionary_splat_pattern (identifier_kwargs) identifier_kwargs )dictionary_splat_pattern )parameters (block (expression_statement (assignment (identifier_levelOverride) identifier_levelOverride (boolean_operator (call (attribute (identifier_kwargs) identifier_kwargs (identifier_get) identifier_get )attribute (argument_list (string_'level') string_'level' )argument_list )call (attribute (identifier_self) identifier_self (identifier__lastlevel) identifier__lastlevel )attribute )boolean_operator )assignment )expression_statement (expression_statement (call (attribute (identifier_self) identifier_self (identifier__log) identifier__log )attribute (argument_list (identifier_levelOverride) identifier_levelOverride (string_'') string_'' (string_'newline') string_'newline' (identifier_args) identifier_args (identifier_kwargs) identifier_kwargs )argument_list )call )expression_statement )block )function_definition )module
Prints an empty line to the log. Uses the level of the last message printed unless specified otherwise with the level= kwarg.
(module (function_definition (function_name_get_by_hostname) function_name_get_by_hostname (parameters (identifier_self) identifier_self (identifier_hostname) identifier_hostname )parameters (block (expression_statement (assignment (identifier_resources) identifier_resources (call (attribute (attribute (identifier_self) identifier_self (identifier__client) identifier__client )attribute (identifier_get_all) identifier_get_all )attribute (argument_list )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_resources_filtered) identifier_resources_filtered (list_comprehension (identifier_x) identifier_x (for_in_clause (identifier_x) identifier_x (identifier_resources) identifier_resources )for_in_clause (if_clause (comparison_operator (subscript (identifier_x) identifier_x (string_'hostname') string_'hostname' )subscript (identifier_hostname) identifier_hostname )comparison_operator )if_clause )list_comprehension )assignment )expression_statement (if_statement (identifier_resources_filtered) identifier_resources_filtered (block (return_statement (subscript (identifier_resources_filtered) identifier_resources_filtered (integer_0) integer_0 )subscript )return_statement )block (else_clause (block (return_statement (None) None )return_statement )block )else_clause )if_statement )block )function_definition )module
Retrieve a storage system by its hostname. Works only in API500 onwards. Args: hostname: Storage system hostname. Returns: dict
(module (function_definition (function_name_weld_arrays_to_vec_of_struct) function_name_weld_arrays_to_vec_of_struct (parameters (identifier_arrays) identifier_arrays (identifier_weld_types) identifier_weld_types )parameters (block (expression_statement (assignment (identifier_weld_obj) identifier_weld_obj (call (identifier_create_empty_weld_object) identifier_create_empty_weld_object (argument_list )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_obj_ids) identifier_obj_ids (list_comprehension (call (identifier_get_weld_obj_id) identifier_get_weld_obj_id (argument_list (identifier_weld_obj) identifier_weld_obj (identifier_array) identifier_array )argument_list )call (for_in_clause (identifier_array) identifier_array (identifier_arrays) identifier_arrays )for_in_clause )list_comprehension )assignment )expression_statement (expression_statement (assignment (identifier_arrays) identifier_arrays (conditional_expression (call (attribute (string_'zip({})') string_'zip({})' (identifier_format) identifier_format )attribute (argument_list (call (attribute (string_', ') string_', ' (identifier_join) identifier_join )attribute (argument_list (identifier_obj_ids) identifier_obj_ids )argument_list )call )argument_list )call (comparison_operator (call (identifier_len) identifier_len (argument_list (identifier_obj_ids) identifier_obj_ids )argument_list )call (integer_1) integer_1 )comparison_operator (call (attribute (string_'{}') string_'{}' (identifier_format) identifier_format )attribute (argument_list (subscript (identifier_obj_ids) identifier_obj_ids (integer_0) integer_0 )subscript )argument_list )call )conditional_expression )assignment )expression_statement (expression_statement (assignment (identifier_input_types) identifier_input_types (conditional_expression (call (identifier_struct_of) identifier_struct_of (argument_list (string_'{e}') string_'{e}' (identifier_weld_types) identifier_weld_types )argument_list )call (comparison_operator (call (identifier_len) identifier_len (argument_list (identifier_obj_ids) identifier_obj_ids )argument_list )call (integer_1) integer_1 )comparison_operator (call (attribute (string_'{}') string_'{}' (identifier_format) identifier_format )attribute (argument_list (subscript (identifier_weld_types) identifier_weld_types (integer_0) integer_0 )subscript )argument_list )call )conditional_expression )assignment )expression_statement (expression_statement (assignment (identifier_res_types) identifier_res_types (call (identifier_struct_of) identifier_struct_of (argument_list (string_'{e}') string_'{e}' (identifier_weld_types) identifier_weld_types )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_to_merge) identifier_to_merge (conditional_expression (string_'e') string_'e' (comparison_operator (call (identifier_len) identifier_len (argument_list (identifier_obj_ids) identifier_obj_ids )argument_list )call (integer_1) integer_1 )comparison_operator (string_'{e}') string_'{e}' )conditional_expression )assignment )expression_statement (expression_statement (assignment (identifier_weld_template) identifier_weld_template (assignment (attribute (identifier_weld_obj) identifier_weld_obj (identifier_weld_code) identifier_weld_code )attribute (call (attribute (identifier_weld_template) identifier_weld_template (identifier_format) identifier_format )attribute (argument_list (keyword_argument (identifier_arrays) identifier_arrays (identifier_arrays) identifier_arrays )keyword_argument (keyword_argument (identifier_input_types) identifier_input_types (identifier_input_types) identifier_input_types )keyword_argument (keyword_argument (identifier_res_types) identifier_res_types (identifier_res_types) identifier_res_types )keyword_argument (keyword_argument (identifier_to_merge) identifier_to_merge (identifier_to_merge) identifier_to_merge )keyword_argument )argument_list )call )assignment )assignment )expression_statement (return_statement (identifier_weld_obj) identifier_weld_obj )return_statement )block )function_definition )module
Create a vector of structs from multiple vectors. Parameters ---------- arrays : list of (numpy.ndarray or WeldObject) Arrays to put in a struct. weld_types : list of WeldType The Weld types of the arrays in the same order. Returns ------- WeldObject Representation of this computation.
(module (function_definition (function_name__split_stock_code) function_name__split_stock_code (parameters (identifier_self) identifier_self (identifier_code) identifier_code )parameters (block (expression_statement (assignment (identifier_stock_str) identifier_stock_str (call (identifier_str) identifier_str (argument_list (identifier_code) identifier_code )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_split_loc) identifier_split_loc (call (attribute (identifier_stock_str) identifier_stock_str (identifier_find) identifier_find )attribute (argument_list (string_".") string_"." )argument_list )call )assignment )expression_statement (if_statement (boolean_operator (comparison_operator (integer_0) integer_0 (identifier_split_loc) identifier_split_loc (binary_operator (call (identifier_len) identifier_len (argument_list (identifier_stock_str) identifier_stock_str )argument_list )call (integer_1) integer_1 )binary_operator )comparison_operator (comparison_operator (subscript (identifier_stock_str) identifier_stock_str (slice (integer_0) integer_0 (colon) colon (identifier_split_loc) identifier_split_loc )slice )subscript (identifier_MKT_MAP) identifier_MKT_MAP )comparison_operator )boolean_operator (block (expression_statement (assignment (identifier_market_str) identifier_market_str (subscript (identifier_stock_str) identifier_stock_str (slice (integer_0) integer_0 (colon) colon (identifier_split_loc) identifier_split_loc )slice )subscript )assignment )expression_statement (expression_statement (assignment (identifier_partial_stock_str) identifier_partial_stock_str (subscript (identifier_stock_str) identifier_stock_str (slice (binary_operator (identifier_split_loc) identifier_split_loc (integer_1) integer_1 )binary_operator (colon) colon )slice )subscript )assignment )expression_statement (return_statement (expression_list (identifier_RET_OK) identifier_RET_OK (tuple (identifier_market_str) identifier_market_str (identifier_partial_stock_str) identifier_partial_stock_str )tuple )expression_list )return_statement )block (else_clause (block (expression_statement (assignment (identifier_error_str) identifier_error_str (binary_operator (identifier_ERROR_STR_PREFIX) identifier_ERROR_STR_PREFIX (binary_operator (string_"format of %s is wrong. (US.AAPL, HK.00700, SZ.000001)") string_"format of %s is wrong. (US.AAPL, HK.00700, SZ.000001)" (identifier_stock_str) identifier_stock_str )binary_operator )binary_operator )assignment )expression_statement (return_statement (expression_list (identifier_RET_ERROR) identifier_RET_ERROR (identifier_error_str) identifier_error_str )expression_list )return_statement )block )else_clause )if_statement )block )function_definition )module
do not use the built-in split function in python. The built-in function cannot handle some stock strings correctly. for instance, US..DJI, where the dot . itself is a part of original code
(module (function_definition (function_name_getPolicyValue) function_name_getPolicyValue (parameters (identifier_self) identifier_self )parameters (block (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier__cur) identifier__cur )attribute (identifier_execute) identifier_execute )attribute (argument_list (string_"SELECT action FROM policy") string_"SELECT action FROM policy" )argument_list )call )expression_statement (expression_statement (assignment (identifier_r) identifier_r (call (attribute (attribute (identifier_self) identifier_self (identifier__cur) identifier__cur )attribute (identifier_fetchall) identifier_fetchall )attribute (argument_list )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_policy) identifier_policy (list_comprehension (subscript (identifier_x) identifier_x (integer_0) integer_0 )subscript (for_in_clause (identifier_x) identifier_x (identifier_r) identifier_r )for_in_clause )list_comprehension )assignment )expression_statement (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier__cur) identifier__cur )attribute (identifier_execute) identifier_execute )attribute (argument_list (string_"SELECT value FROM V") string_"SELECT value FROM V" )argument_list )call )expression_statement (expression_statement (assignment (identifier_r) identifier_r (call (attribute (attribute (identifier_self) identifier_self (identifier__cur) identifier__cur )attribute (identifier_fetchall) identifier_fetchall )attribute (argument_list )argument_list )call )assignment )expression_statement (expression_statement (assignment (identifier_value) identifier_value (list_comprehension (subscript (identifier_x) identifier_x (integer_0) integer_0 )subscript (for_in_clause (identifier_x) identifier_x (identifier_r) identifier_r )for_in_clause )list_comprehension )assignment )expression_statement (return_statement (expression_list (identifier_policy) identifier_policy (identifier_value) identifier_value )expression_list )return_statement )block )function_definition )module
Get the policy and value vectors.
(module (function_definition (function_name_columnSimilarities) function_name_columnSimilarities (parameters (identifier_self) identifier_self (default_parameter (identifier_threshold) identifier_threshold (float_0.0) float_0.0 )default_parameter )parameters (block (expression_statement (assignment (identifier_java_sims_mat) identifier_java_sims_mat (call (attribute (attribute (identifier_self) identifier_self (identifier__java_matrix_wrapper) identifier__java_matrix_wrapper )attribute (identifier_call) identifier_call )attribute (argument_list (string_"columnSimilarities") string_"columnSimilarities" (call (identifier_float) identifier_float (argument_list (identifier_threshold) identifier_threshold )argument_list )call )argument_list )call )assignment )expression_statement (return_statement (call (identifier_CoordinateMatrix) identifier_CoordinateMatrix (argument_list (identifier_java_sims_mat) identifier_java_sims_mat )argument_list )call )return_statement )block )function_definition )module
Compute similarities between columns of this matrix. The threshold parameter is a trade-off knob between estimate quality and computational cost. The default threshold setting of 0 guarantees deterministically correct results, but uses the brute-force approach of computing normalized dot products. Setting the threshold to positive values uses a sampling approach and incurs strictly less computational cost than the brute-force approach. However the similarities computed will be estimates. The sampling guarantees relative-error correctness for those pairs of columns that have similarity greater than the given similarity threshold. To describe the guarantee, we set some notation: * Let A be the smallest in magnitude non-zero element of this matrix. * Let B be the largest in magnitude non-zero element of this matrix. * Let L be the maximum number of non-zeros per row. For example, for {0,1} matrices: A=B=1. Another example, for the Netflix matrix: A=1, B=5 For those column pairs that are above the threshold, the computed similarity is correct to within 20% relative error with probability at least 1 - (0.981)^10/B^ The shuffle size is bounded by the *smaller* of the following two expressions: * O(n log(n) L / (threshold * A)) * O(m L^2^) The latter is the cost of the brute-force approach, so for non-zero thresholds, the cost is always cheaper than the brute-force approach. :param: threshold: Set to 0 for deterministic guaranteed correctness. Similarities above this threshold are estimated with the cost vs estimate quality trade-off described above. :return: An n x n sparse upper-triangular CoordinateMatrix of cosine similarities between columns of this matrix. >>> rows = sc.parallelize([[1, 2], [1, 5]]) >>> mat = RowMatrix(rows) >>> sims = mat.columnSimilarities() >>> sims.entries.first().value 0.91914503...
(module (function_definition (function_name_validate_metadata) function_name_validate_metadata (parameters (identifier_self) identifier_self (identifier_handler) identifier_handler )parameters (block (if_statement (comparison_operator (attribute (identifier_self) identifier_self (identifier_meta) identifier_meta )attribute (string_'category') string_'category' )comparison_operator (block (expression_statement (assignment (identifier_new_metadata) identifier_new_metadata (attribute (identifier_self) identifier_self (identifier_metadata) identifier_metadata )attribute )assignment )expression_statement (expression_statement (assignment (identifier_cur_metadata) identifier_cur_metadata (call (attribute (identifier_handler) identifier_handler (identifier_read_metadata) identifier_read_metadata )attribute (argument_list (attribute (identifier_self) identifier_self (identifier_cname) identifier_cname )attribute )argument_list )call )assignment )expression_statement (if_statement (parenthesized_expression (boolean_operator (boolean_operator (comparison_operator (identifier_new_metadata) identifier_new_metadata (None) None )comparison_operator (comparison_operator (identifier_cur_metadata) identifier_cur_metadata (None) None )comparison_operator )boolean_operator (not_operator (call (identifier_array_equivalent) identifier_array_equivalent (argument_list (identifier_new_metadata) identifier_new_metadata (identifier_cur_metadata) identifier_cur_metadata )argument_list )call )not_operator )boolean_operator )parenthesized_expression (block (raise_statement (call (identifier_ValueError) identifier_ValueError (argument_list (concatenated_string (string_"cannot append a categorical with ") string_"cannot append a categorical with " (string_"different categories to the existing") string_"different categories to the existing" )concatenated_string )argument_list )call )raise_statement )block )if_statement )block )if_statement )block )function_definition )module
validate that kind=category does not change the categories