sequence
stringlengths
388
5.57k
docstring
stringlengths
11
171
0 module [1];1 function_definition [2,3,5];2 function_name [] _readable;3 parameters [4];4 identifier [] self;5 block [6,25,51,60,72,78,88,99,135];6 if_statement [7,11];7 not_operator [8];8 attribute [9,10];9 identifier [] self;10 identifier [] candidates;11 block [12,19];12 expression_statement [13];13 call [14,17];14 attribute [15,16];15 identifier [] logger;16 identifier [] info;17 argument_list [18];18 string [] No candidates found in document.;19 return_statement [20];20 call [21,24];21 attribute [22,23];22 identifier [] self;23 identifier [] _handle_no_candidates;24 argument_list [];25 expression_statement [26];26 assignment [27,28];27 identifier [] best_candidates;28 call [29,30];29 identifier [] sorted;30 argument_list [31,42,48];31 generator_expression [32,33];32 identifier [] c;33 for_in_clause [34,35];34 identifier [] c;35 call [36,41];36 attribute [37,40];37 attribute [38,39];38 identifier [] self;39 identifier [] candidates;40 identifier [] values;41 argument_list [];42 keyword_argument [43,44];43 identifier [] key;44 call [45,46];45 identifier [] attrgetter;46 argument_list [47];47 string [] content_score;48 keyword_argument [49,50];49 identifier [] reverse;50 True [];51 expression_statement [52];52 assignment [53,54];53 identifier [] printer;54 call [55,56];55 identifier [] PrettyPrinter;56 argument_list [57];57 keyword_argument [58,59];58 identifier [] indent;59 integer [] 2;60 expression_statement [61];61 call [62,65];62 attribute [63,64];63 identifier [] logger;64 identifier [] debug;65 argument_list [66];66 call [67,70];67 attribute [68,69];68 identifier [] printer;69 identifier [] pformat;70 argument_list [71];71 identifier [] best_candidates;72 expression_statement [73];73 assignment [74,75];74 identifier [] winner;75 subscript [76,77];76 identifier [] best_candidates;77 integer [] 0;78 expression_statement [79];79 assignment [80,81];80 identifier [] updated_winner;81 call [82,83];82 identifier [] check_siblings;83 argument_list [84,85];84 identifier [] winner;85 attribute [86,87];86 identifier [] self;87 identifier [] candidates;88 expression_statement [89];89 assignment [90,93];90 attribute [91,92];91 identifier [] updated_winner;92 identifier [] node;93 call [94,95];94 identifier [] prep_article;95 argument_list [96];96 attribute [97,98];97 identifier [] updated_winner;98 identifier [] node;99 if_statement [100,105,118];100 comparison_operator [101,104] is not;101 attribute [102,103];102 identifier [] updated_winner;103 identifier [] node;104 None [];105 block [106];106 expression_statement [107];107 assignment [108,109];108 identifier [] dom;109 call [110,111];110 identifier [] build_base_document;111 argument_list [112,115];112 attribute [113,114];113 identifier [] updated_winner;114 identifier [] node;115 attribute [116,117];116 identifier [] self;117 identifier [] _return_fragment;118 else_clause [119];119 block [120,127];120 expression_statement [121];121 call [122,125];122 attribute [123,124];123 identifier [] logger;124 identifier [] info;125 argument_list [126];126 string [] Had candidates but failed to find a cleaned winning DOM.;127 expression_statement [128];128 assignment [129,130];129 identifier [] dom;130 call [131,134];131 attribute [132,133];132 identifier [] self;133 identifier [] _handle_no_candidates;134 argument_list [];135 return_statement [136];136 call [137,140];137 attribute [138,139];138 identifier [] self;139 identifier [] _remove_orphans;140 argument_list [141];141 call [142,145];142 attribute [143,144];143 identifier [] dom;144 identifier [] get_element_by_id;145 argument_list [146];146 string [] readabilityBody
The readable parsed article
0 module [1];1 function_definition [2,3,6];2 function_name [] create_subnode;3 parameters [4,5];4 identifier [] self;5 identifier [] data;6 block [7];7 return_statement [8];8 call [9,12];9 attribute [10,11];10 identifier [] self;11 identifier [] __class__;12 argument_list [13,14,24,29];13 identifier [] data;14 keyword_argument [15,16];15 identifier [] axis;16 call [17,20];17 attribute [18,19];18 identifier [] self;19 identifier [] sel_axis;20 argument_list [21];21 attribute [22,23];22 identifier [] self;23 identifier [] axis;24 keyword_argument [25,26];25 identifier [] sel_axis;26 attribute [27,28];27 identifier [] self;28 identifier [] sel_axis;29 keyword_argument [30,31];30 identifier [] dimensions;31 attribute [32,33];32 identifier [] self;33 identifier [] dimensions
Creates a subnode for the current node
0 module [1];1 function_definition [2,3,5];2 function_name [] _send_status_0x01_request;3 parameters [4];4 identifier [] self;5 block [6,16];6 expression_statement [7];7 assignment [8,9];8 identifier [] status_command;9 call [10,11];10 identifier [] StandardSend;11 argument_list [12,15];12 attribute [13,14];13 identifier [] self;14 identifier [] _address;15 identifier [] COMMAND_LIGHT_STATUS_REQUEST_0X19_0X01;16 expression_statement [17];17 call [18,21];18 attribute [19,20];19 identifier [] self;20 identifier [] _send_method;21 argument_list [22,23];22 identifier [] status_command;23 attribute [24,25];24 identifier [] self;25 identifier [] _status_message_0x01_received
Sent status request to device.
0 module [1];1 function_definition [2,3,7];2 function_name [] subscribe;3 parameters [4,5,6];4 identifier [] self;5 identifier [] transport;6 identifier [] data;7 block [8,27];8 expression_statement [9];9 call [10,13];10 attribute [11,12];11 identifier [] self;12 identifier [] add;13 argument_list [14,15];14 identifier [] transport;15 keyword_argument [16,17];16 identifier [] address;17 call [18,26];18 attribute [19,25];19 call [20,23];20 attribute [21,22];21 identifier [] data;22 identifier [] get;23 argument_list [24];24 string [] hx_subscribe;25 identifier [] encode;26 argument_list [];27 expression_statement [28];28 call [29,32];29 attribute [30,31];30 identifier [] self;31 identifier [] send;32 argument_list [33,36];33 subscript [34,35];34 identifier [] data;35 string [] hx_subscribe;36 dictionary [37];37 pair [38,39];38 string [] message;39 binary_operator [40,41] %;40 string [] %r is listening;41 identifier [] transport
adds a transport to a channel
0 module [1];1 function_definition [2,3,12];2 function_name [] validateAQLQuery;3 parameters [4,5,6,9];4 identifier [] self;5 identifier [] query;6 default_parameter [7,8];7 identifier [] bindVars;8 None [];9 default_parameter [10,11];10 identifier [] options;11 None [];12 block [13,15,24,33,46,72,80];13 expression_statement [14];14 string [] returns the server answer is the query is valid. Raises an AQLQueryError if not;15 if_statement [16,19];16 comparison_operator [17,18] is;17 identifier [] bindVars;18 None [];19 block [20];20 expression_statement [21];21 assignment [22,23];22 identifier [] bindVars;23 dictionary [];24 if_statement [25,28];25 comparison_operator [26,27] is;26 identifier [] options;27 None [];28 block [29];29 expression_statement [30];30 assignment [31,32];31 identifier [] options;32 dictionary [];33 expression_statement [34];34 assignment [35,36];35 identifier [] payload;36 dictionary [37,40,43];37 pair [38,39];38 string [] query;39 identifier [] query;40 pair [41,42];41 string [] bindVars;42 identifier [] bindVars;43 pair [44,45];44 string [] options;45 identifier [] options;46 expression_statement [47];47 assignment [48,49];48 identifier [] r;49 call [50,57];50 attribute [51,56];51 attribute [52,55];52 attribute [53,54];53 identifier [] self;54 identifier [] connection;55 identifier [] session;56 identifier [] post;57 argument_list [58,61];58 attribute [59,60];59 identifier [] self;60 identifier [] cursorsURL;61 keyword_argument [62,63];62 identifier [] data;63 call [64,67];64 attribute [65,66];65 identifier [] json;66 identifier [] dumps;67 argument_list [68,69];68 identifier [] payload;69 keyword_argument [70,71];70 identifier [] default;71 identifier [] str;72 expression_statement [73];73 assignment [74,75];74 identifier [] data;75 call [76,79];76 attribute [77,78];77 identifier [] r;78 identifier [] json;79 argument_list [];80 if_statement [81,91,94];81 boolean_operator [82,87] and;82 comparison_operator [83,86] ==;83 attribute [84,85];84 identifier [] r;85 identifier [] status_code;86 integer [] 201;87 not_operator [88];88 subscript [89,90];89 identifier [] data;90 string [] error;91 block [92];92 return_statement [93];93 identifier [] data;94 else_clause [95];95 block [96];96 raise_statement [97];97 call [98,99];98 identifier [] AQLQueryError;99 argument_list [100,103,104];100 subscript [101,102];101 identifier [] data;102 string [] errorMessage;103 identifier [] query;104 identifier [] data
returns the server answer is the query is valid. Raises an AQLQueryError if not
0 module [1];1 function_definition [2,3,5];2 function_name [] nqueen_graph;3 parameters [4];4 identifier [] self;5 block [6,12,40,52,64,107,143,150,157,172];6 expression_statement [7];7 assignment [8,9];8 identifier [] nqueens;9 attribute [10,11];10 identifier [] self;11 identifier [] results;12 for_statement [13,14,24];13 identifier [] piece_label;14 call [15,21];15 attribute [16,20];16 call [17,18];17 identifier [] set;18 argument_list [19];19 identifier [] PIECE_LABELS;20 identifier [] difference;21 argument_list [22];22 list [23] ['queen'];23 string [] queen;24 block [25];25 expression_statement [26];26 assignment [27,28];27 identifier [] nqueens;28 subscript [29,30];29 identifier [] nqueens;30 call [31,36];31 attribute [32,35];32 subscript [33,34];33 identifier [] nqueens;34 identifier [] piece_label;35 identifier [] map;36 argument_list [37];37 attribute [38,39];38 identifier [] pandas;39 identifier [] isnull;40 expression_statement [41];41 assignment [42,43];42 identifier [] nqueens;43 subscript [44,45];44 identifier [] nqueens;45 comparison_operator [46,49] ==;46 subscript [47,48];47 identifier [] nqueens;48 string [] length;49 subscript [50,51];50 identifier [] nqueens;51 string [] queen;52 expression_statement [53];53 assignment [54,55];54 identifier [] nqueens;55 subscript [56,57];56 identifier [] nqueens;57 comparison_operator [58,61] ==;58 subscript [59,60];59 identifier [] nqueens;60 string [] height;61 subscript [62,63];62 identifier [] nqueens;63 string [] queen;64 for_statement [65,68,75];65 pattern_list [66,67];66 identifier [] label;67 identifier [] value;68 call [69,74];69 attribute [70,73];70 attribute [71,72];71 identifier [] self;72 identifier [] context;73 identifier [] items;74 argument_list [];75 block [76];76 if_statement [77,79,95];77 not_operator [78];78 identifier [] value;79 block [80];80 expression_statement [81];81 assignment [82,83];82 identifier [] nqueens;83 subscript [84,85];84 identifier [] nqueens;85 call [86,91];86 attribute [87,90];87 subscript [88,89];88 identifier [] nqueens;89 identifier [] label;90 identifier [] map;91 argument_list [92];92 attribute [93,94];93 identifier [] pandas;94 identifier [] isnull;95 else_clause [96];96 block [97];97 expression_statement [98];98 assignment [99,100];99 identifier [] nqueens;100 subscript [101,102];101 identifier [] nqueens;102 comparison_operator [103,106] ==;103 subscript [104,105];104 identifier [] nqueens;105 identifier [] label;106 identifier [] value;107 expression_statement [108];108 assignment [109,110];109 identifier [] plot;110 call [111,114];111 attribute [112,113];112 identifier [] seaborn;113 identifier [] factorplot;114 argument_list [115,118,121,131,134,137,140];115 keyword_argument [116,117];116 identifier [] x;117 string [] queen;118 keyword_argument [119,120];119 identifier [] y;120 string [] execution_time;121 keyword_argument [122,123];122 identifier [] data;123 call [124,127];124 attribute [125,126];125 identifier [] nqueens;126 identifier [] sort;127 argument_list [128];128 keyword_argument [129,130];129 identifier [] columns;130 string [] queen;131 keyword_argument [132,133];132 identifier [] estimator;133 identifier [] median;134 keyword_argument [135,136];135 identifier [] kind;136 string [] bar;137 keyword_argument [138,139];138 identifier [] palette;139 string [] BuGn_d;140 keyword_argument [141,142];141 identifier [] aspect;142 float [] 1.5;143 expression_statement [144];144 call [145,148];145 attribute [146,147];146 identifier [] plot;147 identifier [] set_xlabels;148 argument_list [149];149 string [] Number of queens;150 expression_statement [151];151 call [152,155];152 attribute [153,154];153 identifier [] plot;154 identifier [] set_ylabels;155 argument_list [156];156 string [] Solving time in seconds (log scale);157 expression_statement [158];158 call [159,170];159 attribute [160,169];160 subscript [161,168];161 call [162,167];162 attribute [163,166];163 attribute [164,165];164 identifier [] plot;165 identifier [] fig;166 identifier [] get_axes;167 argument_list [];168 integer [] 0;169 identifier [] set_yscale;170 argument_list [171];171 string [] log;172 expression_statement [173];173 call [174,177];174 attribute [175,176];175 identifier [] plot;176 identifier [] savefig;177 argument_list [178];178 string [] nqueens-performances.png
Graph n-queens problem for the current version and context.
0 module [1];1 function_definition [2,3,10];2 function_name [] validate;3 parameters [4,5,8];4 identifier [] cls;5 default_parameter [6,7];6 identifier [] partial;7 True [];8 dictionary_splat_pattern [9];9 identifier [] kwargs;10 block [11,15,47,54,110];11 expression_statement [12];12 assignment [13,14];13 identifier [] data;14 identifier [] kwargs;15 if_statement [16,18];16 not_operator [17];17 identifier [] partial;18 block [19];19 expression_statement [20];20 assignment [21,22];21 identifier [] data;22 call [23,24];23 identifier [] dict;24 argument_list [25,27];25 dictionary_splat [26];26 identifier [] kwargs;27 dictionary_splat [28];28 dictionary_comprehension [29,34,41];29 pair [30,33];30 attribute [31,32];31 identifier [] col;32 identifier [] name;33 None [];34 for_in_clause [35,36];35 identifier [] col;36 attribute [37,40];37 attribute [38,39];38 identifier [] cls;39 identifier [] __table__;40 identifier [] c;41 if_clause [42];42 comparison_operator [43,46] not in;43 attribute [44,45];44 identifier [] col;45 identifier [] name;46 identifier [] kwargs;47 expression_statement [48];48 assignment [49,50];49 identifier [] errors;50 call [51,52];51 identifier [] defaultdict;52 argument_list [53];53 identifier [] list;54 for_statement [55,58,63];55 pattern_list [56,57];56 identifier [] name;57 identifier [] value;58 call [59,62];59 attribute [60,61];60 identifier [] data;61 identifier [] items;62 argument_list [];63 block [64];64 for_statement [65,66,72];65 identifier [] validator;66 call [67,70];67 attribute [68,69];68 identifier [] cls;69 identifier [] _get_validators;70 argument_list [71];71 identifier [] name;72 block [73];73 try_statement [74,80];74 block [75];75 expression_statement [76];76 call [77,78];77 identifier [] validator;78 argument_list [79];79 identifier [] value;80 except_clause [81,85];81 as_pattern [82,83];82 identifier [] ValidationError;83 as_pattern_target [84];84 identifier [] e;85 block [86,92,98];86 expression_statement [87];87 assignment [88,91];88 attribute [89,90];89 identifier [] e;90 identifier [] model;91 identifier [] cls;92 expression_statement [93];93 assignment [94,97];94 attribute [95,96];95 identifier [] e;96 identifier [] column;97 identifier [] name;98 expression_statement [99];99 call [100,105];100 attribute [101,104];101 subscript [102,103];102 identifier [] errors;103 identifier [] name;104 identifier [] append;105 argument_list [106];106 call [107,108];107 identifier [] str;108 argument_list [109];109 identifier [] e;110 if_statement [111,112];111 identifier [] errors;112 block [113];113 raise_statement [114];114 call [115,116];115 identifier [] ValidationErrors;116 argument_list [117];117 identifier [] errors
Validate kwargs before setting attributes on the model
0 module [1];1 function_definition [2,3,7];2 function_name [] forcemigrate;3 parameters [4];4 default_parameter [5,6];5 identifier [] app;6 None [];7 block [8,18,28];8 if_statement [9,12];9 comparison_operator [10,11] is;10 identifier [] app;11 None [];12 block [13];13 expression_statement [14];14 call [15,16];15 identifier [] abort;16 argument_list [17];17 string [] No app name given.;18 expression_statement [19];19 call [20,21];20 identifier [] local;21 argument_list [22];22 call [23,26];23 attribute [24,25];24 string [] ./manage.py migrate {} --fake;25 identifier [] format;26 argument_list [27];27 identifier [] app;28 expression_statement [29];29 call [30,31];30 identifier [] local;31 argument_list [32];32 call [33,36];33 attribute [34,35];34 string [] ./manage.py migrate {};35 identifier [] format;36 argument_list [37];37 identifier [] app
Force migrations to apply for a given app.
0 module [1];1 function_definition [2,3,11];2 function_name [] from_disk_add_path;3 parameters [4,5,8];4 identifier [] self;5 default_parameter [6,7];6 identifier [] path;7 None [];8 default_parameter [9,10];9 identifier [] resource_list;10 None [];11 block [12,33,52];12 if_statement [13,27];13 () [14];14 boolean_operator [15,22] or;15 boolean_operator [16,19] or;16 comparison_operator [17,18] is;17 identifier [] path;18 None [];19 comparison_operator [20,21] is;20 identifier [] resource_list;21 None [];22 comparison_operator [23,26] is;23 attribute [24,25];24 identifier [] self;25 identifier [] mapper;26 None [];27 block [28];28 raise_statement [29];29 call [30,31];30 identifier [] ValueError;31 argument_list [32];32 string [] Must specify path, resource_list and mapper;33 if_statement [34,42];34 () [35];35 comparison_operator [36,39] <;36 attribute [37,38];37 identifier [] sys;38 identifier [] version_info;39 tuple [40,41];40 integer [] 3;41 integer [] 0;42 block [43];43 expression_statement [44];44 assignment [45,46];45 identifier [] path;46 call [47,50];47 attribute [48,49];48 identifier [] path;49 identifier [] decode;50 argument_list [51];51 string [] utf-8;52 if_statement [53,61,154];53 call [54,59];54 attribute [55,58];55 attribute [56,57];56 identifier [] os;57 identifier [] path;58 identifier [] isdir;59 argument_list [60];60 identifier [] path;61 block [62,66];62 expression_statement [63];63 assignment [64,65];64 identifier [] num_files;65 integer [] 0;66 for_statement [67,71,80];67 pattern_list [68,69,70];68 identifier [] dirpath;69 identifier [] dirs;70 identifier [] files;71 call [72,75];72 attribute [73,74];73 identifier [] os;74 identifier [] walk;75 argument_list [76,77];76 identifier [] path;77 keyword_argument [78,79];78 identifier [] topdown;79 True [];80 block [81];81 for_statement [82,83,84];82 identifier [] file_in_dirpath;83 identifier [] files;84 block [85,89,109,124];85 expression_statement [86];86 augmented_assignment [87,88] +=;87 identifier [] num_files;88 integer [] 1;89 if_statement [90,96];90 () [91];91 comparison_operator [92,95] ==;92 binary_operator [93,94] %;93 identifier [] num_files;94 integer [] 50000;95 integer [] 0;96 block [97];97 expression_statement [98];98 call [99,104];99 attribute [100,103];100 attribute [101,102];101 identifier [] self;102 identifier [] logger;103 identifier [] info;104 argument_list [105];105 binary_operator [106,107] %;106 string [] ResourceListBuilder.from_disk_add_path: %d files...;107 () [108];108 identifier [] num_files;109 expression_statement [110];110 call [111,114];111 attribute [112,113];112 identifier [] self;113 identifier [] add_file;114 argument_list [115,118,121];115 keyword_argument [116,117];116 identifier [] resource_list;117 identifier [] resource_list;118 keyword_argument [119,120];119 identifier [] dir;120 identifier [] dirpath;121 keyword_argument [122,123];122 identifier [] file;123 identifier [] file_in_dirpath;124 for_statement [125,126,129];125 identifier [] exclude;126 attribute [127,128];127 identifier [] self;128 identifier [] exclude_dirs;129 block [130];130 if_statement [131,134];131 comparison_operator [132,133] in;132 identifier [] exclude;133 identifier [] dirs;134 block [135,147];135 expression_statement [136];136 call [137,142];137 attribute [138,141];138 attribute [139,140];139 identifier [] self;140 identifier [] logger;141 identifier [] debug;142 argument_list [143];143 binary_operator [144,145] %;144 string [] Excluding dir %s;145 () [146];146 identifier [] exclude;147 expression_statement [148];148 call [149,152];149 attribute [150,151];150 identifier [] dirs;151 identifier [] remove;152 argument_list [153];153 identifier [] exclude;154 else_clause [155];155 block [156];156 expression_statement [157];157 call [158,161];158 attribute [159,160];159 identifier [] self;160 identifier [] add_file;161 argument_list [162,165];162 keyword_argument [163,164];163 identifier [] resource_list;164 identifier [] resource_list;165 keyword_argument [166,167];166 identifier [] file;167 identifier [] path
Add to resource_list with resources from disk scan starting at path.
0 module [1];1 function_definition [2,3,21];2 function_name [] rest_get;3 parameters [4,5,6,9,12,15,18];4 identifier [] self;5 identifier [] url;6 default_parameter [7,8];7 identifier [] params;8 None [];9 default_parameter [10,11];10 identifier [] headers;11 None [];12 default_parameter [13,14];13 identifier [] auth;14 None [];15 default_parameter [16,17];16 identifier [] verify;17 True [];18 default_parameter [19,20];19 identifier [] cert;20 None [];21 block [22,46];22 expression_statement [23];23 assignment [24,25];24 identifier [] res;25 call [26,29];26 attribute [27,28];27 identifier [] requests;28 identifier [] get;29 argument_list [30,31,34,37,40,43];30 identifier [] url;31 keyword_argument [32,33];32 identifier [] params;33 identifier [] params;34 keyword_argument [35,36];35 identifier [] headers;36 identifier [] headers;37 keyword_argument [38,39];38 identifier [] auth;39 identifier [] auth;40 keyword_argument [41,42];41 identifier [] verify;42 identifier [] verify;43 keyword_argument [44,45];44 identifier [] cert;45 identifier [] cert;46 return_statement [47];47 expression_list [48,51];48 attribute [49,50];49 identifier [] res;50 identifier [] text;51 attribute [52,53];52 identifier [] res;53 identifier [] status_code
Perform a GET request to url with optional authentication
0 module [1];1 function_definition [2,3,5];2 function_name [] open_files;3 parameters [4];4 identifier [] filenames;5 block [6,13,26];6 expression_statement [7];7 assignment [8,9];8 identifier [] command;9 binary_operator [10,12] +;10 list [11] ['open'];11 string [] open;12 identifier [] filenames;13 expression_statement [14];14 assignment [15,16];15 identifier [] process;16 call [17,18];17 identifier [] Popen;18 argument_list [19,20,23];19 identifier [] command;20 keyword_argument [21,22];21 identifier [] stdout;22 identifier [] PIPE;23 keyword_argument [24,25];24 identifier [] stderr;25 identifier [] PIPE;26 expression_statement [27];27 assignment [28,31];28 pattern_list [29,30];29 identifier [] stdout;30 identifier [] stderr;31 call [32,35];32 attribute [33,34];33 identifier [] process;34 identifier [] communicate;35 argument_list []
Call the system 'open' command on a file.
0 module [1];1 function_definition [2,3,6];2 function_name [] _init_edges_relationships;3 parameters [4,5];4 identifier [] rel2src2dsts;5 identifier [] rel2dst2srcs;6 block [7,11,23,97];7 expression_statement [8];8 assignment [9,10];9 identifier [] edge_rel2fromto;10 dictionary [];11 expression_statement [12];12 assignment [13,14];13 identifier [] relationships;14 call [15,21];15 attribute [16,20];16 call [17,18];17 identifier [] set;18 argument_list [19];19 identifier [] rel2src2dsts;20 identifier [] union;21 argument_list [22];22 identifier [] rel2dst2srcs;23 for_statement [24,25,26];24 identifier [] reltype;25 identifier [] relationships;26 block [27,31,61,91];27 expression_statement [28];28 assignment [29,30];29 identifier [] edge_from_to;30 list [] [];31 if_statement [32,35];32 comparison_operator [33,34] in;33 identifier [] reltype;34 identifier [] rel2src2dsts;35 block [36];36 for_statement [37,40,47];37 pattern_list [38,39];38 identifier [] parent;39 identifier [] children;40 call [41,46];41 attribute [42,45];42 subscript [43,44];43 identifier [] rel2src2dsts;44 identifier [] reltype;45 identifier [] items;46 argument_list [];47 block [48];48 for_statement [49,50,51];49 identifier [] child;50 identifier [] children;51 block [52];52 expression_statement [53];53 call [54,57];54 attribute [55,56];55 identifier [] edge_from_to;56 identifier [] append;57 argument_list [58];58 tuple [59,60];59 identifier [] child;60 identifier [] parent;61 if_statement [62,65];62 comparison_operator [63,64] in;63 identifier [] reltype;64 identifier [] rel2dst2srcs;65 block [66];66 for_statement [67,70,77];67 pattern_list [68,69];68 identifier [] parent;69 identifier [] children;70 call [71,76];71 attribute [72,75];72 subscript [73,74];73 identifier [] rel2dst2srcs;74 identifier [] reltype;75 identifier [] items;76 argument_list [];77 block [78];78 for_statement [79,80,81];79 identifier [] child;80 identifier [] children;81 block [82];82 expression_statement [83];83 call [84,87];84 attribute [85,86];85 identifier [] edge_from_to;86 identifier [] append;87 argument_list [88];88 tuple [89,90];89 identifier [] child;90 identifier [] parent;91 expression_statement [92];92 assignment [93,96];93 subscript [94,95];94 identifier [] edge_rel2fromto;95 identifier [] reltype;96 identifier [] edge_from_to;97 return_statement [98];98 identifier [] edge_rel2fromto
Get the directed edges from GO term to GO term using relationships.
0 module [1];1 function_definition [2,3,6];2 function_name [] vtquery;3 parameters [4,5];4 identifier [] apikey;5 identifier [] checksums;6 block [7,30];7 expression_statement [8];8 assignment [9,10];9 identifier [] data;10 dictionary [11,14];11 pair [12,13];12 string [] apikey;13 identifier [] apikey;14 pair [15,16];15 string [] resource;16 boolean_operator [17,24] or;17 boolean_operator [18,23] and;18 call [19,20];19 identifier [] isinstance;20 argument_list [21,22];21 identifier [] checksums;22 identifier [] str;23 identifier [] checksums;24 call [25,28];25 attribute [26,27];26 string [] ,;27 identifier [] join;28 argument_list [29];29 identifier [] checksums;30 while_statement [31,32];31 integer [] 1;32 block [33,45,51];33 expression_statement [34];34 assignment [35,36];35 identifier [] response;36 call [37,40];37 attribute [38,39];38 identifier [] requests;39 identifier [] post;40 argument_list [41,42];41 identifier [] VT_REPORT_URL;42 keyword_argument [43,44];43 identifier [] data;44 identifier [] data;45 expression_statement [46];46 call [47,50];47 attribute [48,49];48 identifier [] response;49 identifier [] raise_for_status;50 argument_list [];51 if_statement [52,57,64,85];52 comparison_operator [53,56] ==;53 attribute [54,55];54 identifier [] response;55 identifier [] status_code;56 integer [] 200;57 block [58];58 return_statement [59];59 call [60,63];60 attribute [61,62];61 identifier [] response;62 identifier [] json;63 argument_list [];64 elif_clause [65,70];65 comparison_operator [66,69] ==;66 attribute [67,68];67 identifier [] response;68 identifier [] status_code;69 integer [] 204;70 block [71,78];71 expression_statement [72];72 call [73,76];73 attribute [74,75];74 identifier [] logging;75 identifier [] debug;76 argument_list [77];77 string [] API key request rate limit reached, throttling.;78 expression_statement [79];79 call [80,83];80 attribute [81,82];81 identifier [] time;82 identifier [] sleep;83 argument_list [84];84 identifier [] VT_THROTTLE;85 else_clause [86];86 block [87];87 raise_statement [88];88 call [89,90];89 identifier [] RuntimeError;90 argument_list [91];91 binary_operator [92,93] %;92 string [] Response status code %s;93 attribute [94,95];94 identifier [] response;95 identifier [] status_code
Performs the query dealing with errors and throttling requests.
0 module [1];1 function_definition [2,3,5];2 function_name [] deleteSNPs;3 parameters [4];4 identifier [] setName;5 block [6,12,69];6 expression_statement [7];7 assignment [8,9];8 identifier [] con;9 attribute [10,11];10 identifier [] conf;11 identifier [] db;12 try_statement [13,57];13 block [14,23,29,35,45,51];14 expression_statement [15];15 assignment [16,17];16 identifier [] SMaster;17 call [18,19];18 identifier [] SNPMaster;19 argument_list [20];20 keyword_argument [21,22];21 identifier [] setName;22 identifier [] setName;23 expression_statement [24];24 call [25,28];25 attribute [26,27];26 identifier [] con;27 identifier [] beginTransaction;28 argument_list [];29 expression_statement [30];30 assignment [31,32];31 identifier [] SNPType;32 attribute [33,34];33 identifier [] SMaster;34 identifier [] SNPType;35 expression_statement [36];36 call [37,40];37 attribute [38,39];38 identifier [] con;39 identifier [] delete;40 argument_list [41,42,43];41 identifier [] SNPType;42 string [] setName = ?;43 tuple [44];44 identifier [] setName;45 expression_statement [46];46 call [47,50];47 attribute [48,49];48 identifier [] SMaster;49 identifier [] delete;50 argument_list [];51 expression_statement [52];52 call [53,56];53 attribute [54,55];54 identifier [] con;55 identifier [] endTransaction;56 argument_list [];57 except_clause [58,59];58 identifier [] KeyError;59 block [60,67];60 raise_statement [61];61 call [62,63];62 identifier [] KeyError;63 argument_list [64];64 binary_operator [65,66] %;65 string [] Can't delete the setName %s because i can't find it in SNPMaster, maybe there's not set by that name;66 identifier [] setName;67 return_statement [68];68 False [];69 return_statement [70];70 True []
deletes a set of polymorphisms
0 module [1];1 function_definition [2,3,6];2 function_name [] drop_columns;3 parameters [4,5];4 identifier [] records;5 identifier [] slices;6 block [7];7 for_statement [8,9,10];8 identifier [] record;9 identifier [] records;10 block [11,36,52,79];11 expression_statement [12];12 assignment [13,14];13 identifier [] drop;14 call [15,16];15 identifier [] set;16 generator_expression [17,18,21];17 identifier [] i;18 for_in_clause [19,20];19 identifier [] slice;20 identifier [] slices;21 for_in_clause [22,23];22 identifier [] i;23 call [24,25];24 identifier [] range;25 argument_list [26];26 list_splat [27];27 call [28,31];28 attribute [29,30];29 identifier [] slice;30 identifier [] indices;31 argument_list [32];32 call [33,34];33 identifier [] len;34 argument_list [35];35 identifier [] record;36 expression_statement [37];37 assignment [38,39];38 identifier [] keep;39 list_comprehension [40,43];40 comparison_operator [41,42] not in;41 identifier [] i;42 identifier [] drop;43 for_in_clause [44,45];44 identifier [] i;45 call [46,47];46 identifier [] range;47 argument_list [48];48 call [49,50];49 identifier [] len;50 argument_list [51];51 identifier [] record;52 expression_statement [53];53 assignment [54,57];54 attribute [55,56];55 identifier [] record;56 identifier [] seq;57 call [58,59];58 identifier [] Seq;59 argument_list [60,74];60 call [61,64];61 attribute [62,63];62 string [];63 identifier [] join;64 argument_list [65];65 call [66,69];66 attribute [67,68];67 identifier [] itertools;68 identifier [] compress;69 argument_list [70,73];70 attribute [71,72];71 identifier [] record;72 identifier [] seq;73 identifier [] keep;74 attribute [75,78];75 attribute [76,77];76 identifier [] record;77 identifier [] seq;78 identifier [] alphabet;79 expression_statement [80];80 yield [81];81 identifier [] record
Drop all columns present in ``slices`` from records
0 module [1];1 function_definition [2,3,7];2 function_name [] delete_external_nodes;3 parameters [4,5];4 identifier [] sender;5 dictionary_splat_pattern [6];6 identifier [] kwargs;7 block [8,14,44];8 expression_statement [9];9 assignment [10,11];10 identifier [] node;11 subscript [12,13];12 identifier [] kwargs;13 string [] instance;14 if_statement [15,41];15 boolean_operator [16,32] or;16 boolean_operator [17,24] or;17 comparison_operator [18,23] is;18 attribute [19,22];19 attribute [20,21];20 identifier [] node;21 identifier [] layer;22 identifier [] is_external;23 False [];24 not_operator [25];25 call [26,27];26 identifier [] hasattr;27 argument_list [28,31];28 attribute [29,30];29 identifier [] node;30 identifier [] layer;31 string [] external;32 comparison_operator [33,40] is;33 attribute [34,39];34 attribute [35,38];35 attribute [36,37];36 identifier [] node;37 identifier [] layer;38 identifier [] external;39 identifier [] synchronizer_path;40 None [];41 block [42];42 return_statement [43];43 False [];44 if_statement [45,56];45 boolean_operator [46,51] and;46 call [47,48];47 identifier [] hasattr;48 argument_list [49,50];49 identifier [] node;50 string [] external;51 attribute [52,55];52 attribute [53,54];53 identifier [] node;54 identifier [] external;55 identifier [] external_id;56 block [57];57 expression_statement [58];58 call [59,62];59 attribute [60,61];60 identifier [] push_changes_to_external_layers;61 identifier [] delay;62 argument_list [63,70,77];63 keyword_argument [64,65];64 identifier [] node;65 attribute [66,69];66 attribute [67,68];67 identifier [] node;68 identifier [] external;69 identifier [] external_id;70 keyword_argument [71,72];71 identifier [] external_layer;72 attribute [73,76];73 attribute [74,75];74 identifier [] node;75 identifier [] layer;76 identifier [] external;77 keyword_argument [78,79];78 identifier [] operation;79 string [] delete
sync by deleting nodes from external layers when needed
0 module [1];1 function_definition [2,3,5];2 function_name [] sendhello;3 parameters [4];4 identifier [] self;5 block [6];6 try_statement [7,59];7 block [8,20,30,39,49];8 expression_statement [9];9 assignment [10,11];10 identifier [] cli_hello_msg;11 binary_operator [12,19] +;12 binary_operator [13,18] +;13 binary_operator [14,17] +;14 binary_operator [15,16] +;15 string [] <hello>\n;16 string [] <capabilities>\n;17 string [] <capability>urn:ietf:params:netconf:base:1.0</capability>\n;18 string [] </capabilities>\n;19 string [] </hello>\n;20 expression_statement [21];21 call [22,27];22 attribute [23,26];23 attribute [24,25];24 identifier [] self;25 identifier [] _cParams;26 identifier [] set;27 argument_list [28,29];28 string [] cli_hello;29 identifier [] cli_hello_msg;30 expression_statement [31];31 call [32,37];32 attribute [33,36];33 attribute [34,35];34 identifier [] self;35 identifier [] _hConn;36 identifier [] sendmsg;37 argument_list [38];38 identifier [] cli_hello_msg;39 expression_statement [40];40 assignment [41,42];41 identifier [] ser_hello_msg;42 call [43,48];43 attribute [44,47];44 attribute [45,46];45 identifier [] self;46 identifier [] _hConn;47 identifier [] recvmsg;48 argument_list [];49 expression_statement [50];50 call [51,56];51 attribute [52,55];52 attribute [53,54];53 identifier [] self;54 identifier [] _cParams;55 identifier [] set;56 argument_list [57,58];57 string [] ser_hello;58 identifier [] ser_hello_msg;59 except_clause [60];60 block [61,63];61 print_statement [62];62 string [] BNClient: Call sendhello fail;63 expression_statement [64];64 call [65,68];65 attribute [66,67];66 identifier [] sys;67 identifier [] exit;68 argument_list []
end of function exchgcaps
0 module [1];1 function_definition [2,3,5];2 function_name [] _create_logger_;3 parameters [4];4 identifier [] name;5 block [6,15,23,35,42,51];6 expression_statement [7];7 assignment [8,9];8 identifier [] logger;9 call [10,13];10 attribute [11,12];11 identifier [] logging;12 identifier [] getLogger;13 argument_list [14];14 identifier [] name;15 expression_statement [16];16 assignment [17,18];17 identifier [] handler;18 call [19,22];19 attribute [20,21];20 identifier [] logging;21 identifier [] StreamHandler;22 argument_list [];23 expression_statement [24];24 call [25,28];25 attribute [26,27];26 identifier [] handler;27 identifier [] setFormatter;28 argument_list [29];29 call [30,33];30 attribute [31,32];31 identifier [] logging;32 identifier [] Formatter;33 argument_list [34];34 string [] %(levelname)s %(message)s;35 expression_statement [36];36 call [37,40];37 attribute [38,39];38 identifier [] logger;39 identifier [] addHandler;40 argument_list [41];41 identifier [] handler;42 expression_statement [43];43 call [44,47];44 attribute [45,46];45 identifier [] logger;46 identifier [] setLevel;47 argument_list [48];48 attribute [49,50];49 identifier [] logging;50 identifier [] INFO;51 return_statement [52];52 identifier [] logger
Implementation detail, creates a logger.
0 module [1];1 function_definition [2,3,16,18];2 function_name [] handle_legacy_tloc;3 parameters [4,8,12];4 typed_parameter [5,6];5 identifier [] line;6 type [7];7 identifier [] str;8 typed_parameter [9,10];9 identifier [] position;10 type [11];11 identifier [] int;12 typed_parameter [13,14];13 identifier [] tokens;14 type [15];15 identifier [] ParseResults;16 type [17];17 identifier [] ParseResults;18 block [19,29];19 expression_statement [20];20 call [21,24];21 attribute [22,23];22 identifier [] log;23 identifier [] log;24 argument_list [25,26,27,28];25 integer [] 5;26 string [] legacy translocation statement: %s [%d];27 identifier [] line;28 identifier [] position;29 return_statement [30];30 identifier [] tokens
Handle translocations that lack the ``fromLoc`` and ``toLoc`` entries.
0 module [1];1 function_definition [2,3,7];2 function_name [] _on_leave;3 parameters [4,5];4 identifier [] self;5 list_splat_pattern [6];6 identifier [] args;7 block [8,37];8 if_statement [9,12,24];9 attribute [10,11];10 identifier [] self;11 identifier [] __clicked;12 block [13];13 expression_statement [14];14 call [15,18];15 attribute [16,17];16 identifier [] self;17 identifier [] config;18 argument_list [19];19 keyword_argument [20,21];20 identifier [] foreground;21 attribute [22,23];22 identifier [] self;23 identifier [] _clicked_color;24 else_clause [25];25 block [26];26 expression_statement [27];27 call [28,31];28 attribute [29,30];29 identifier [] self;30 identifier [] config;31 argument_list [32];32 keyword_argument [33,34];33 identifier [] foreground;34 attribute [35,36];35 identifier [] self;36 identifier [] _normal_color;37 expression_statement [38];38 call [39,42];39 attribute [40,41];40 identifier [] self;41 identifier [] config;42 argument_list [43];43 keyword_argument [44,45];44 identifier [] cursor;45 string []
Set the text color to either the normal color when not clicked or the clicked color when clicked.
0 module [1];1 function_definition [2,3,8];2 function_name [] run_gvcftyper;3 parameters [4,5,6,7];4 identifier [] vrn_files;5 identifier [] out_file;6 identifier [] region;7 identifier [] data;8 block [9,87];9 if_statement [10,17];10 not_operator [11];11 call [12,15];12 attribute [13,14];13 identifier [] utils;14 identifier [] file_exists;15 argument_list [16];16 identifier [] out_file;17 block [18];18 with_statement [19,29];19 with_clause [20];20 with_item [21];21 as_pattern [22,27];22 call [23,24];23 identifier [] file_transaction;24 argument_list [25,26];25 identifier [] data;26 identifier [] out_file;27 as_pattern_target [28];28 identifier [] tx_out_file;29 block [30,37,46,55,64,71];30 expression_statement [31];31 assignment [32,33];32 identifier [] license;33 call [34,35];34 identifier [] license_export;35 argument_list [36];36 identifier [] data;37 expression_statement [38];38 assignment [39,40];39 identifier [] ref_file;40 call [41,44];41 attribute [42,43];42 identifier [] dd;43 identifier [] get_ref_file;44 argument_list [45];45 identifier [] data;46 expression_statement [47];47 assignment [48,49];48 identifier [] input_files;49 call [50,53];50 attribute [51,52];51 string [];52 identifier [] join;53 argument_list [54];54 identifier [] vrn_files;55 expression_statement [56];56 assignment [57,58];57 identifier [] region;58 call [59,62];59 attribute [60,61];60 identifier [] bamprep;61 identifier [] region_to_gatk;62 argument_list [63];63 identifier [] region;64 expression_statement [65];65 assignment [66,67];66 identifier [] cmd;67 () [68];68 concatenated_string [69,70];69 string [] {license}sentieon driver -r {ref_file} --interval {region};70 string [] --algo GVCFtyper {tx_out_file} {input_files};71 expression_statement [72];72 call [73,76];73 attribute [74,75];74 identifier [] do;75 identifier [] run;76 argument_list [77,86];77 call [78,81];78 attribute [79,80];79 identifier [] cmd;80 identifier [] format;81 argument_list [82];82 dictionary_splat [83];83 call [84,85];84 identifier [] locals;85 argument_list [];86 string [] Sentieon GVCFtyper;87 return_statement [88];88 identifier [] out_file
Produce joint called variants from input gVCF files.
0 module [1];1 function_definition [2,3,8];2 function_name [] _read_response;3 parameters [4,5];4 identifier [] self;5 default_parameter [6,7];6 identifier [] may_block;7 False [];8 block [9,25,80,86];9 expression_statement [10];10 assignment [11,12];11 identifier [] res;12 subscript [13,22];13 call [14,17];14 attribute [15,16];15 identifier [] self;16 identifier [] _waitfor_set;17 argument_list [18,21];18 attribute [19,20];19 identifier [] yubikey_defs;20 identifier [] RESP_PENDING_FLAG;21 identifier [] may_block;22 slice [23,24];23 colon [];24 integer [] 7;25 while_statement [26,27];26 True [];27 block [28,36,47];28 expression_statement [29];29 assignment [30,31];30 identifier [] this;31 call [32,35];32 attribute [33,34];33 identifier [] self;34 identifier [] _read;35 argument_list [];36 expression_statement [37];37 assignment [38,39];38 identifier [] flags;39 call [40,43];40 attribute [41,42];41 identifier [] yubico_util;42 identifier [] ord_byte;43 argument_list [44];44 subscript [45,46];45 identifier [] this;46 integer [] 7;47 if_statement [48,53,77];48 binary_operator [49,50] &;49 identifier [] flags;50 attribute [51,52];51 identifier [] yubikey_defs;52 identifier [] RESP_PENDING_FLAG;53 block [54,60,69];54 expression_statement [55];55 assignment [56,57];56 identifier [] seq;57 binary_operator [58,59] &;58 identifier [] flags;59 integer [] 0b00011111;60 if_statement [61,67];61 boolean_operator [62,63] and;62 identifier [] res;63 () [64];64 comparison_operator [65,66] ==;65 identifier [] seq;66 integer [] 0;67 block [68];68 break_statement [];69 expression_statement [70];70 augmented_assignment [71,72] +=;71 identifier [] res;72 subscript [73,74];73 identifier [] this;74 slice [75,76];75 colon [];76 integer [] 7;77 else_clause [78];78 block [79];79 break_statement [];80 expression_statement [81];81 call [82,85];82 attribute [83,84];83 identifier [] self;84 identifier [] _write_reset;85 argument_list [];86 return_statement [87];87 identifier [] res
Wait for a response to become available, and read it.
0 module [1];1 function_definition [2,3,8];2 function_name [] _cwl_workflow_template;3 parameters [4,5];4 identifier [] inputs;5 default_parameter [6,7];6 identifier [] top_level;7 False [];8 block [9,13,67];9 expression_statement [10];10 assignment [11,12];11 identifier [] ready_inputs;12 list [] [];13 for_statement [14,15,16];14 identifier [] inp;15 identifier [] inputs;16 block [17,26,41,53,60];17 expression_statement [18];18 assignment [19,20];19 identifier [] cur_inp;20 call [21,24];21 attribute [22,23];22 identifier [] copy;23 identifier [] deepcopy;24 argument_list [25];25 identifier [] inp;26 for_statement [27,28,32];27 identifier [] attr;28 list [29,30,31] ["source", "valueFrom", "wf_duplicate"];29 string [] source;30 string [] valueFrom;31 string [] wf_duplicate;32 block [33];33 expression_statement [34];34 call [35,38];35 attribute [36,37];36 identifier [] cur_inp;37 identifier [] pop;38 argument_list [39,40];39 identifier [] attr;40 None [];41 if_statement [42,43];42 identifier [] top_level;43 block [44];44 expression_statement [45];45 assignment [46,47];46 identifier [] cur_inp;47 call [48,51];48 attribute [49,50];49 identifier [] workflow;50 identifier [] _flatten_nested_input;51 argument_list [52];52 identifier [] cur_inp;53 expression_statement [54];54 assignment [55,56];55 identifier [] cur_inp;56 call [57,58];57 identifier [] _clean_record;58 argument_list [59];59 identifier [] cur_inp;60 expression_statement [61];61 call [62,65];62 attribute [63,64];63 identifier [] ready_inputs;64 identifier [] append;65 argument_list [66];66 identifier [] cur_inp;67 return_statement [68];68 dictionary [69,72,75,78,103,106,109];69 pair [70,71];70 string [] class;71 string [] Workflow;72 pair [73,74];73 string [] cwlVersion;74 string [] v1.0;75 pair [76,77];76 string [] hints;77 list [] [];78 pair [79,80];79 string [] requirements;80 list [81,95,99] [{"class": "EnvVarRequirement",\n "envDef": [{"envName": "MPLCONFIGDIR", "envValue": "."}]},\n {"class": "ScatterFeatureRequirement"},\n {"class": "SubworkflowFeatureRequirement"}];81 dictionary [82,85];82 pair [83,84];83 string [] class;84 string [] EnvVarRequirement;85 pair [86,87];86 string [] envDef;87 list [88] [{"envName": "MPLCONFIGDIR", "envValue": "."}];88 dictionary [89,92];89 pair [90,91];90 string [] envName;91 string [] MPLCONFIGDIR;92 pair [93,94];93 string [] envValue;94 string [] .;95 dictionary [96];96 pair [97,98];97 string [] class;98 string [] ScatterFeatureRequirement;99 dictionary [100];100 pair [101,102];101 string [] class;102 string [] SubworkflowFeatureRequirement;103 pair [104,105];104 string [] inputs;105 identifier [] ready_inputs;106 pair [107,108];107 string [] outputs;108 list [] [];109 pair [110,111];110 string [] steps;111 list [] []
Retrieve CWL inputs shared amongst different workflows.
0 module [1];1 function_definition [2,3,6];2 function_name [] handle_command;3 parameters [4,5];4 identifier [] editor;5 identifier [] input_string;6 block [7,16,22,30,39,48,57,107];7 expression_statement [8];8 assignment [9,10];9 identifier [] m;10 call [11,14];11 attribute [12,13];12 identifier [] COMMAND_GRAMMAR;13 identifier [] match;14 argument_list [15];15 identifier [] input_string;16 if_statement [17,20];17 comparison_operator [18,19] is;18 identifier [] m;19 None [];20 block [21];21 return_statement [];22 expression_statement [23];23 assignment [24,25];24 identifier [] variables;25 call [26,29];26 attribute [27,28];27 identifier [] m;28 identifier [] variables;29 argument_list [];30 expression_statement [31];31 assignment [32,33];32 identifier [] command;33 call [34,37];34 attribute [35,36];35 identifier [] variables;36 identifier [] get;37 argument_list [38];38 string [] command;39 expression_statement [40];40 assignment [41,42];41 identifier [] go_to_line;42 call [43,46];43 attribute [44,45];44 identifier [] variables;45 identifier [] get;46 argument_list [47];47 string [] go_to_line;48 expression_statement [49];49 assignment [50,51];50 identifier [] shell_command;51 call [52,55];52 attribute [53,54];53 identifier [] variables;54 identifier [] get;55 argument_list [56];56 string [] shell_command;57 if_statement [58,61,68,82,95];58 comparison_operator [59,60] is not;59 identifier [] go_to_line;60 None [];61 block [62];62 expression_statement [63];63 call [64,65];64 identifier [] _go_to_line;65 argument_list [66,67];66 identifier [] editor;67 identifier [] go_to_line;68 elif_clause [69,72];69 comparison_operator [70,71] is not;70 identifier [] shell_command;71 None [];72 block [73];73 expression_statement [74];74 call [75,80];75 attribute [76,79];76 attribute [77,78];77 identifier [] editor;78 identifier [] application;79 identifier [] run_system_command;80 argument_list [81];81 identifier [] shell_command;82 elif_clause [83,87];83 call [84,85];84 identifier [] has_command_handler;85 argument_list [86];86 identifier [] command;87 block [88];88 expression_statement [89];89 call [90,91];90 identifier [] call_command_handler;91 argument_list [92,93,94];92 identifier [] command;93 identifier [] editor;94 identifier [] variables;95 else_clause [96];96 block [97,106];97 expression_statement [98];98 call [99,102];99 attribute [100,101];100 identifier [] editor;101 identifier [] show_message;102 argument_list [103];103 binary_operator [104,105] %;104 string [] Not an editor command: %s;105 identifier [] input_string;106 return_statement [];107 expression_statement [108];108 call [109,112];109 attribute [110,111];110 identifier [] editor;111 identifier [] sync_with_prompt_toolkit;112 argument_list []
Handle commands entered on the Vi command line.
0 module [1];1 function_definition [2,3,7];2 function_name [] fit_traptransit;3 parameters [4,5,6];4 identifier [] ts;5 identifier [] fs;6 identifier [] p0;7 block [8,23,34];8 expression_statement [9];9 assignment [10,13];10 pattern_list [11,12];11 identifier [] pfit;12 identifier [] success;13 call [14,15];14 identifier [] leastsq;15 argument_list [16,17,18];16 identifier [] traptransit_resid;17 identifier [] p0;18 keyword_argument [19,20];19 identifier [] args;20 tuple [21,22];21 identifier [] ts;22 identifier [] fs;23 if_statement [24,31];24 comparison_operator [25,26] not in;25 identifier [] success;26 list [27,28,29,30] [1,2,3,4];27 integer [] 1;28 integer [] 2;29 integer [] 3;30 integer [] 4;31 block [32];32 raise_statement [33];33 identifier [] NoFitError;34 return_statement [35];35 identifier [] pfit
Fits trapezoid model to provided ts,fs
0 module [1];1 function_definition [2,3,18];2 function_name [] make_movie;3 parameters [4,5,6,9,12,15];4 identifier [] workdir;5 identifier [] pf;6 default_parameter [7,8];7 identifier [] dpi;8 integer [] 120;9 default_parameter [10,11];10 identifier [] fps;11 integer [] 1;12 default_parameter [13,14];13 identifier [] format;14 string [] pdf;15 default_parameter [16,17];16 identifier [] engine;17 string [] ffmpeg;18 block [19,26,56,63,108];19 expression_statement [20];20 call [21,24];21 attribute [22,23];22 identifier [] os;23 identifier [] chdir;24 argument_list [25];25 identifier [] workdir;26 if_statement [27,30];27 comparison_operator [28,29] !=;28 identifier [] format;29 string [] png;30 block [31,40,51];31 expression_statement [32];32 assignment [33,34];33 identifier [] cmd;34 call [35,38];35 attribute [36,37];36 string [] parallel convert -density {};37 identifier [] format;38 argument_list [39];39 identifier [] dpi;40 expression_statement [41];41 augmented_assignment [42,43] +=;42 identifier [] cmd;43 binary_operator [44,45] +;44 string [] {} {.}.png :::;45 call [46,49];46 attribute [47,48];47 string [] *.{};48 identifier [] format;49 argument_list [50];50 identifier [] format;51 expression_statement [52];52 call [53,54];53 identifier [] sh;54 argument_list [55];55 identifier [] cmd;56 assert_statement [57,62];57 comparison_operator [58,59] in;58 identifier [] engine;59 tuple [60,61];60 string [] ffmpeg;61 string [] gifsicle;62 string [] Only ffmpeg or gifsicle is currently supported;63 if_statement [64,67,79];64 comparison_operator [65,66] ==;65 identifier [] engine;66 string [] ffmpeg;67 block [68];68 expression_statement [69];69 assignment [70,71];70 identifier [] cmd;71 call [72,76];72 attribute [73,74,75];73 string [] ffmpeg -framerate {} -pattern_type glob -i '*.png' {}.mp4;74 line_continuation [] \;75 identifier [] format;76 argument_list [77,78];77 identifier [] fps;78 identifier [] pf;79 elif_clause [80,83];80 comparison_operator [81,82] ==;81 identifier [] engine;82 string [] gifsicle;83 block [84,88,99];84 expression_statement [85];85 assignment [86,87];86 identifier [] cmd;87 string [] convert *.png gif:- |;88 expression_statement [89];89 augmented_assignment [90,91] +=;90 identifier [] cmd;91 call [92,95];92 attribute [93,94];93 string [] gifsicle --delay {} --loop --optimize=3;94 identifier [] format;95 argument_list [96];96 binary_operator [97,98] /;97 integer [] 100;98 identifier [] fps;99 expression_statement [100];100 augmented_assignment [101,102] +=;101 identifier [] cmd;102 call [103,106];103 attribute [104,105];104 string [] --colors=256 --multifile - > {}.gif;105 identifier [] format;106 argument_list [107];107 identifier [] pf;108 expression_statement [109];109 call [110,111];110 identifier [] sh;111 argument_list [112];112 identifier [] cmd
Make the movie using either ffmpeg or gifsicle.
0 module [1];1 function_definition [2,3,5];2 function_name [] gather_meta;3 parameters [4];4 identifier [] self;5 block [6,23,36,107];6 if_statement [7,20];7 not_operator [8];8 call [9,14];9 attribute [10,13];10 attribute [11,12];11 identifier [] os;12 identifier [] path;13 identifier [] exists;14 argument_list [15];15 subscript [16,19];16 attribute [17,18];17 identifier [] self;18 identifier [] paths;19 string [] meta;20 block [21];21 return_statement [22];22 string [];23 expression_statement [24];24 assignment [25,26];25 identifier [] meta_dict;26 call [27,30];27 attribute [28,29];28 identifier [] utils;29 identifier [] yaml_load;30 argument_list [31];31 subscript [32,35];32 attribute [33,34];33 identifier [] self;34 identifier [] paths;35 string [] meta;36 if_statement [37,42,99];37 boolean_operator [38,39] and;38 identifier [] meta_dict;39 comparison_operator [40,41] in;40 string [] dependencies;41 identifier [] meta_dict;42 block [43,47,79,91];43 expression_statement [44];44 assignment [45,46];45 identifier [] dep_list;46 list [] [];47 for_statement [48,49,52];48 identifier [] dependency;49 subscript [50,51];50 identifier [] meta_dict;51 string [] dependencies;52 block [53];53 if_statement [54,60,70];54 comparison_operator [55,59] is;55 call [56,57];56 identifier [] type;57 argument_list [58];58 identifier [] dependency;59 identifier [] dict;60 block [61];61 expression_statement [62];62 call [63,66];63 attribute [64,65];64 identifier [] dep_list;65 identifier [] append;66 argument_list [67];67 subscript [68,69];68 identifier [] dependency;69 string [] role;70 else_clause [71];71 block [72];72 expression_statement [73];73 call [74,77];74 attribute [75,76];75 identifier [] dep_list;76 identifier [] append;77 argument_list [78];78 identifier [] dependency;79 expression_statement [80];80 assignment [81,84];81 subscript [82,83];82 identifier [] meta_dict;83 string [] dependencies;84 call [85,86];85 identifier [] list;86 argument_list [87];87 call [88,89];88 identifier [] set;89 argument_list [90];90 identifier [] dep_list;91 expression_statement [92];92 assignment [93,96];93 attribute [94,95];94 identifier [] self;95 identifier [] dependencies;96 subscript [97,98];97 identifier [] meta_dict;98 string [] dependencies;99 else_clause [100];100 block [101];101 expression_statement [102];102 assignment [103,106];103 attribute [104,105];104 identifier [] self;105 identifier [] dependencies;106 list [] [];107 return_statement [108];108 call [109,112];109 attribute [110,111];110 identifier [] utils;111 identifier [] file_to_string;112 argument_list [113];113 subscript [114,117];114 attribute [115,116];115 identifier [] self;116 identifier [] paths;117 string [] meta
Return the meta file.
0 module [1];1 function_definition [2,3,6];2 function_name [] add_grant;3 parameters [4,5];4 identifier [] self;5 identifier [] grant;6 block [7,20];7 if_statement [8,14];8 not_operator [9];9 call [10,11];10 identifier [] isinstance;11 argument_list [12,13];12 identifier [] grant;13 identifier [] AccessTokenGrant;14 block [15];15 raise_statement [16];16 call [17,18];17 identifier [] ValueError;18 argument_list [19];19 string [] Grant must be an instance of AccessTokenGrant.;20 expression_statement [21];21 call [22,27];22 attribute [23,26];23 attribute [24,25];24 identifier [] self;25 identifier [] grants;26 identifier [] append;27 argument_list [28];28 identifier [] grant
Add a grant to this AccessToken
0 module [1];1 function_definition [2,3,7];2 function_name [] row_to_obj;3 parameters [4,5,6];4 identifier [] self;5 identifier [] row;6 identifier [] cur;7 block [8,18,38];8 expression_statement [9];9 assignment [10,11];10 identifier [] obj;11 call [12,17];12 attribute [13,16];13 attribute [14,15];14 identifier [] tornado;15 identifier [] util;16 identifier [] ObjectDict;17 argument_list [];18 for_statement [19,22,29];19 pattern_list [20,21];20 identifier [] val;21 identifier [] desc;22 call [23,24];23 identifier [] zip;24 argument_list [25,26];25 identifier [] row;26 attribute [27,28];27 identifier [] cur;28 identifier [] description;29 block [30];30 expression_statement [31];31 assignment [32,37];32 subscript [33,34];33 identifier [] obj;34 attribute [35,36];35 identifier [] desc;36 identifier [] name;37 identifier [] val;38 return_statement [39];39 identifier [] obj
Convert a SQL row to an object supporting dict and attribute access.
0 module [1];1 function_definition [2,3,6];2 function_name [] startup;3 parameters [4,5];4 identifier [] self;5 identifier [] app;6 block [7,18,89];7 expression_statement [8];8 assignment [9,12];9 attribute [10,11];10 identifier [] self;11 identifier [] local;12 call [13,14];13 identifier [] slocal;14 argument_list [15];15 attribute [16,17];16 identifier [] app;17 identifier [] loop;18 if_statement [19,30];19 boolean_operator [20,25] and;20 attribute [21,24];21 attribute [22,23];22 identifier [] self;23 identifier [] cfg;24 identifier [] configure_jinja2;25 comparison_operator [26,27] in;26 string [] jinja2;27 attribute [28,29];28 identifier [] app;29 identifier [] ps;30 block [31,44];31 expression_statement [32];32 call [33,42];33 attribute [34,41];34 attribute [35,40];35 attribute [36,39];36 attribute [37,38];37 identifier [] app;38 identifier [] ps;39 identifier [] jinja2;40 identifier [] env;41 identifier [] add_extension;42 argument_list [43];43 string [] jinja2.ext.i18n;44 expression_statement [45];45 call [46,55];46 attribute [47,54];47 attribute [48,53];48 attribute [49,52];49 attribute [50,51];50 identifier [] app;51 identifier [] ps;52 identifier [] jinja2;53 identifier [] env;54 identifier [] install_gettext_callables;55 argument_list [56,69,86];56 lambda [57,59];57 lambda_parameters [58];58 identifier [] x;59 call [60,67];60 attribute [61,66];61 call [62,65];62 attribute [63,64];63 identifier [] self;64 identifier [] get_translations;65 argument_list [];66 identifier [] ugettext;67 argument_list [68];68 identifier [] x;69 lambda [70,74];70 lambda_parameters [71,72,73];71 identifier [] s;72 identifier [] p;73 identifier [] n;74 call [75,82];75 attribute [76,81];76 call [77,80];77 attribute [78,79];78 identifier [] self;79 identifier [] get_translations;80 argument_list [];81 identifier [] ungettext;82 argument_list [83,84,85];83 identifier [] s;84 identifier [] p;85 identifier [] n;86 keyword_argument [87,88];87 identifier [] newstyle;88 True [];89 if_statement [90,93];90 attribute [91,92];91 identifier [] self;92 identifier [] locale_selector_func;93 block [94];94 expression_statement [95];95 call [96,101];96 attribute [97,100];97 attribute [98,99];98 identifier [] app;99 identifier [] middlewares;100 identifier [] append;101 argument_list [102];102 attribute [103,104];103 identifier [] self;104 identifier [] _middleware
Initialize a local namespace and setup Jinja2.
0 module [1];1 function_definition [2,3,7];2 function_name [] query_geonames_country;3 parameters [4,5,6];4 identifier [] self;5 identifier [] placename;6 identifier [] country;7 block [8,27,55,114,123];8 expression_statement [9];9 assignment [10,11];10 identifier [] q;11 dictionary [12];12 pair [13,14];13 string [] multi_match;14 dictionary [15,18,24];15 pair [16,17];16 string [] query;17 identifier [] placename;18 pair [19,20];19 string [] fields;20 list [21,22,23] ['name^5', 'asciiname^5', 'alternativenames'];21 string [] name^5;22 string [] asciiname^5;23 string [] alternativenames;24 pair [25,26];25 string [] type;26 string [] phrase;27 expression_statement [28];28 assignment [29,30];29 identifier [] res;30 call [31,54];31 attribute [32,53];32 subscript [33,49];33 call [34,47];34 attribute [35,46];35 call [36,41];36 attribute [37,40];37 attribute [38,39];38 identifier [] self;39 identifier [] conn;40 identifier [] filter;41 argument_list [42,43];42 string [] term;43 keyword_argument [44,45];44 identifier [] country_code3;45 identifier [] country;46 identifier [] query;47 argument_list [48];48 identifier [] q;49 slice [50,51,52];50 integer [] 0;51 colon [];52 integer [] 50;53 identifier [] execute;54 argument_list [];55 if_statement [56,63];56 comparison_operator [57,62] ==;57 attribute [58,61];58 attribute [59,60];59 identifier [] res;60 identifier [] hits;61 identifier [] total;62 integer [] 0;63 block [64,86];64 expression_statement [65];65 assignment [66,67];66 identifier [] q;67 dictionary [68];68 pair [69,70];69 string [] multi_match;70 dictionary [71,74,80,83];71 pair [72,73];72 string [] query;73 identifier [] placename;74 pair [75,76];75 string [] fields;76 list [77,78,79] ['name', 'asciiname', 'alternativenames'];77 string [] name;78 string [] asciiname;79 string [] alternativenames;80 pair [81,82];81 string [] fuzziness;82 integer [] 1;83 pair [84,85];84 string [] operator;85 string [] and;86 expression_statement [87];87 assignment [88,89];88 identifier [] res;89 call [90,113];90 attribute [91,112];91 subscript [92,108];92 call [93,106];93 attribute [94,105];94 call [95,100];95 attribute [96,99];96 attribute [97,98];97 identifier [] self;98 identifier [] conn;99 identifier [] filter;100 argument_list [101,102];101 string [] term;102 keyword_argument [103,104];103 identifier [] country_code3;104 identifier [] country;105 identifier [] query;106 argument_list [107];107 identifier [] q;108 slice [109,110,111];109 integer [] 0;110 colon [];111 integer [] 50;112 identifier [] execute;113 argument_list [];114 expression_statement [115];115 assignment [116,117];116 identifier [] out;117 call [118,121];118 attribute [119,120];119 identifier [] utilities;120 identifier [] structure_results;121 argument_list [122];122 identifier [] res;123 return_statement [124];124 identifier [] out
Like query_geonames, but this time limited to a specified country.
0 module [1];1 function_definition [2,3,6];2 function_name [] _advance_cluster_time;3 parameters [4,5];4 identifier [] self;5 identifier [] cluster_time;6 block [7];7 if_statement [8,13,20];8 comparison_operator [9,12] is;9 attribute [10,11];10 identifier [] self;11 identifier [] _cluster_time;12 None [];13 block [14];14 expression_statement [15];15 assignment [16,19];16 attribute [17,18];17 identifier [] self;18 identifier [] _cluster_time;19 identifier [] cluster_time;20 elif_clause [21,24];21 comparison_operator [22,23] is not;22 identifier [] cluster_time;23 None [];24 block [25];25 if_statement [26,35];26 comparison_operator [27,30] >;27 subscript [28,29];28 identifier [] cluster_time;29 string [] clusterTime;30 subscript [31,34];31 attribute [32,33];32 identifier [] self;33 identifier [] _cluster_time;34 string [] clusterTime;35 block [36];36 expression_statement [37];37 assignment [38,41];38 attribute [39,40];39 identifier [] self;40 identifier [] _cluster_time;41 identifier [] cluster_time
Internal cluster time helper.
0 module [1];1 function_definition [2,3,4];2 function_name [] start_parent;3 parameters [];4 block [5];5 while_statement [6,7];6 True [];7 block [8,19,27,33,45];8 expression_statement [9];9 assignment [10,11];10 identifier [] args;11 binary_operator [12,16] +;12 list [13] [sys.executable];13 attribute [14,15];14 identifier [] sys;15 identifier [] executable;16 attribute [17,18];17 identifier [] sys;18 identifier [] argv;19 expression_statement [20];20 assignment [21,22];21 identifier [] new_environ;22 call [23,26];23 attribute [24,25];24 identifier [] environ;25 identifier [] copy;26 argument_list [];27 expression_statement [28];28 assignment [29,32];29 subscript [30,31];30 identifier [] new_environ;31 string [] _IN_CHILD;32 string [] yes;33 expression_statement [34];34 assignment [35,36];35 identifier [] ret;36 call [37,40];37 attribute [38,39];38 identifier [] subprocess;39 identifier [] call;40 argument_list [41,42];41 identifier [] args;42 keyword_argument [43,44];43 identifier [] env;44 identifier [] new_environ;45 if_statement [46,51];46 comparison_operator [47,48] !=;47 identifier [] ret;48 attribute [49,50];49 identifier [] settings;50 identifier [] CODE_RELOAD_EXIT;51 block [52];52 return_statement [53];53 identifier [] ret
Start the parent that will simply run the child forever until stopped.
0 module [1];1 function_definition [2,3,6];2 function_name [] add;3 parameters [4,5];4 identifier [] self;5 identifier [] items;6 block [7];7 with_statement [8,11];8 with_clause [9];9 with_item [10];10 identifier [] _presub_lock;11 block [12,18,43];12 expression_statement [13];13 call [14,17];14 attribute [15,16];15 identifier [] self;16 identifier [] load_from_cloud;17 argument_list [];18 for_statement [19,20,26];19 identifier [] entry;20 call [21,24];21 attribute [22,23];22 identifier [] utils;23 identifier [] ensure_listable;24 argument_list [25];25 identifier [] items;26 block [27];27 if_statement [28,33];28 comparison_operator [29,30] not in;29 identifier [] entry;30 attribute [31,32];31 identifier [] self;32 identifier [] current;33 block [34];34 expression_statement [35];35 call [36,41];36 attribute [37,40];37 attribute [38,39];38 identifier [] self;39 identifier [] current;40 identifier [] append;41 argument_list [42];42 identifier [] entry;43 expression_statement [44];44 call [45,48];45 attribute [46,47];46 identifier [] self;47 identifier [] save_to_cloud;48 argument_list []
Add entry to global presubs list
0 module [1];1 function_definition [2,3,6];2 function_name [] _checkremove_que;3 parameters [4,5];4 identifier [] self;5 identifier [] word;6 block [7,11,69,91];7 expression_statement [8];8 assignment [9,10];9 identifier [] in_que_pass_list;10 False [];11 expression_statement [12];12 assignment [13,14];13 identifier [] que_pass_list;14 list [15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,41,42,43,44,45,46,47,48,49,50,51,52,53,54,55,56,57,58,59,60,61,62,63,64,65,66,67,68] ['atque',\n 'quoque',\n 'neque',\n 'itaque',\n 'absque',\n 'apsque',\n 'abusque',\n 'adaeque',\n 'adusque',\n 'denique',\n 'deque',\n 'susque',\n 'oblique',\n 'peraeque',\n 'plenisque',\n 'quandoque',\n 'quisque',\n 'quaeque',\n 'cuiusque',\n 'cuique',\n 'quemque',\n 'quamque',\n 'quaque',\n 'quique',\n 'quorumque',\n 'quarumque',\n 'quibusque',\n 'quosque',\n 'quasque',\n 'quotusquisque',\n 'quousque',\n 'ubique',\n 'undique',\n 'usque',\n 'uterque',\n 'utique',\n 'utroque',\n 'utribique',\n 'torque',\n 'coque',\n 'concoque',\n 'contorque',\n 'detorque',\n 'decoque',\n 'excoque',\n 'extorque',\n 'obtorque',\n 'optorque',\n 'retorque',\n 'recoque',\n 'attorque',\n 'incoque',\n 'intorque',\n 'praetorque'];15 string [] atque;16 string [] quoque;17 string [] neque;18 string [] itaque;19 string [] absque;20 string [] apsque;21 string [] abusque;22 string [] adaeque;23 string [] adusque;24 string [] denique;25 string [] deque;26 string [] susque;27 string [] oblique;28 string [] peraeque;29 string [] plenisque;30 string [] quandoque;31 string [] quisque;32 string [] quaeque;33 string [] cuiusque;34 string [] cuique;35 string [] quemque;36 string [] quamque;37 string [] quaque;38 string [] quique;39 string [] quorumque;40 string [] quarumque;41 string [] quibusque;42 string [] quosque;43 string [] quasque;44 string [] quotusquisque;45 string [] quousque;46 string [] ubique;47 string [] undique;48 string [] usque;49 string [] uterque;50 string [] utique;51 string [] utroque;52 string [] utribique;53 string [] torque;54 string [] coque;55 string [] concoque;56 string [] contorque;57 string [] detorque;58 string [] decoque;59 string [] excoque;60 string [] extorque;61 string [] obtorque;62 string [] optorque;63 string [] retorque;64 string [] recoque;65 string [] attorque;66 string [] incoque;67 string [] intorque;68 string [] praetorque;69 if_statement [70,73,85];70 comparison_operator [71,72] not in;71 identifier [] word;72 identifier [] que_pass_list;73 block [74];74 expression_statement [75];75 assignment [76,77];76 identifier [] word;77 call [78,81];78 attribute [79,80];79 identifier [] re;80 identifier [] sub;81 argument_list [82,83,84];82 string [] r'que$';83 string [];84 identifier [] word;85 else_clause [86];86 block [87];87 expression_statement [88];88 assignment [89,90];89 identifier [] in_que_pass_list;90 True [];91 return_statement [92];92 expression_list [93,94];93 identifier [] word;94 identifier [] in_que_pass_list
If word ends in -que and if word is not in pass list, strip -que
0 module [1];1 function_definition [2,3,10];2 function_name [] GlorotUniformInitializer;3 parameters [4,7];4 default_parameter [5,6];5 identifier [] out_dim;6 integer [] 0;7 default_parameter [8,9];8 identifier [] in_dim;9 integer [] 1;10 block [11,71];11 function_definition [12,13,16];12 function_name [] init;13 parameters [14,15];14 identifier [] shape;15 identifier [] rng;16 block [17,29,43,54];17 expression_statement [18];18 assignment [19,22];19 pattern_list [20,21];20 identifier [] fan_in;21 identifier [] fan_out;22 expression_list [23,26];23 subscript [24,25];24 identifier [] shape;25 identifier [] in_dim;26 subscript [27,28];27 identifier [] shape;28 identifier [] out_dim;29 expression_statement [30];30 assignment [31,32];31 identifier [] std;32 call [33,36];33 attribute [34,35];34 identifier [] np;35 identifier [] sqrt;36 argument_list [37];37 binary_operator [38,39] /;38 float [] 2.0;39 () [40];40 binary_operator [41,42] +;41 identifier [] fan_in;42 identifier [] fan_out;43 expression_statement [44];44 assignment [45,46];45 identifier [] a;46 binary_operator [47,53] *;47 call [48,51];48 attribute [49,50];49 identifier [] np;50 identifier [] sqrt;51 argument_list [52];52 float [] 3.0;53 identifier [] std;54 return_statement [55];55 call [56,61];56 attribute [57,60];57 attribute [58,59];58 identifier [] backend;59 identifier [] random;60 identifier [] uniform;61 argument_list [62,63,64,68];62 identifier [] rng;63 identifier [] shape;64 keyword_argument [65,66];65 identifier [] minval;66 unary_operator [67] -;67 identifier [] a;68 keyword_argument [69,70];69 identifier [] maxval;70 identifier [] a;71 return_statement [72];72 identifier [] init
An initializer function for random uniform Glorot-scaled coefficients.
0 module [1];1 function_definition [2,3,5];2 function_name [] save_new_channel;3 parameters [4];4 identifier [] self;5 block [6,14,38,44];6 expression_statement [7];7 assignment [8,9];8 identifier [] form_info;9 subscript [10,13];10 attribute [11,12];11 identifier [] self;12 identifier [] input;13 string [] form;14 expression_statement [15];15 assignment [16,17];16 identifier [] channel;17 call [18,19];18 identifier [] Channel;19 argument_list [20,23,28,33];20 keyword_argument [21,22];21 identifier [] typ;22 integer [] 15;23 keyword_argument [24,25];24 identifier [] name;25 subscript [26,27];26 identifier [] form_info;27 string [] name;28 keyword_argument [29,30];29 identifier [] description;30 subscript [31,32];31 identifier [] form_info;32 string [] description;33 keyword_argument [34,35];34 identifier [] owner_id;35 subscript [36,37];36 identifier [] form_info;37 string [] owner_id;38 expression_statement [39];39 call [40,43];40 attribute [41,42];41 identifier [] channel;42 identifier [] blocking_save;43 argument_list [];44 expression_statement [45];45 assignment [46,53];46 subscript [47,52];47 attribute [48,51];48 attribute [49,50];49 identifier [] self;50 identifier [] current;51 identifier [] task_data;52 string [] target_channel_key;53 attribute [54,55];54 identifier [] channel;55 identifier [] key
It saves new channel according to specified channel features.
0 module [1];1 function_definition [2,3,9];2 function_name [] render_table;3 parameters [4,5,6];4 identifier [] output_dir;5 identifier [] packages;6 default_parameter [7,8];7 identifier [] jenv;8 identifier [] JENV;9 block [10,16];10 expression_statement [11];11 assignment [12,13];12 identifier [] destination_filename;13 binary_operator [14,15] +;14 identifier [] output_dir;15 string [] /com/swiftnav/sbp/client/MessageTable.java;16 with_statement [17,27];17 with_clause [18];18 with_item [19];19 as_pattern [20,25];20 call [21,22];21 identifier [] open;22 argument_list [23,24];23 identifier [] destination_filename;24 string [] w+;25 as_pattern_target [26];26 identifier [] f;27 block [28,33];28 expression_statement [29];29 call [30,31];30 identifier [] print;31 argument_list [32];32 identifier [] destination_filename;33 expression_statement [34];34 call [35,38];35 attribute [36,37];36 identifier [] f;37 identifier [] write;38 argument_list [39];39 call [40,48];40 attribute [41,47];41 call [42,45];42 attribute [43,44];43 identifier [] jenv;44 identifier [] get_template;45 argument_list [46];46 identifier [] TEMPLATE_TABLE_NAME;47 identifier [] render;48 argument_list [49];49 keyword_argument [50,51];50 identifier [] packages;51 identifier [] packages
Render and output dispatch table
0 module [1];1 function_definition [2,3,8];2 function_name [] compose_post;3 parameters [4,5,6,7];4 identifier [] apikey;5 identifier [] resize;6 identifier [] rotation;7 identifier [] noexif;8 block [9,14,19,38,106,117];9 expression_statement [10];10 call [11,12];11 identifier [] check_rotation;12 argument_list [13];13 identifier [] rotation;14 expression_statement [15];15 call [16,17];16 identifier [] check_resize;17 argument_list [18];18 identifier [] resize;19 expression_statement [20];20 assignment [21,22];21 identifier [] post_data;22 dictionary [23,28,33];23 pair [24,25];24 string [] formatliste;25 tuple [26,27];26 string [];27 string [] og;28 pair [29,30];29 string [] userdrehung;30 tuple [31,32];31 string [];32 identifier [] rotation;33 pair [34,35];34 string [] apikey;35 tuple [36,37];36 string [];37 identifier [] apikey;38 if_statement [39,44,80];39 boolean_operator [40,41] and;40 identifier [] resize;41 comparison_operator [42,43] in;42 string [] x;43 identifier [] resize;44 block [45,64,72];45 expression_statement [46];46 assignment [47,50];47 pattern_list [48,49];48 identifier [] width;49 identifier [] height;50 list_comprehension [51,56];51 call [52,55];52 attribute [53,54];53 identifier [] x;54 identifier [] strip;55 argument_list [];56 for_in_clause [57,58];57 identifier [] x;58 call [59,62];59 attribute [60,61];60 identifier [] resize;61 identifier [] split;62 argument_list [63];63 string [] x;64 expression_statement [65];65 assignment [66,69];66 subscript [67,68];67 identifier [] post_data;68 string [] udefb;69 tuple [70,71];70 string [];71 identifier [] width;72 expression_statement [73];73 assignment [74,77];74 subscript [75,76];75 identifier [] post_data;76 string [] udefh;77 tuple [78,79];78 string [];79 identifier [] height;80 elif_clause [81,86];81 boolean_operator [82,83] and;82 identifier [] resize;83 comparison_operator [84,85] in;84 string [] %;85 identifier [] resize;86 block [87,100];87 expression_statement [88];88 assignment [89,90];89 identifier [] precentage;90 call [91,98];91 attribute [92,97];92 call [93,96];93 attribute [94,95];94 identifier [] resize;95 identifier [] strip;96 argument_list [];97 identifier [] strip;98 argument_list [99];99 string [] %;100 expression_statement [101];101 assignment [102,105];102 subscript [103,104];103 identifier [] post_data;104 string [] udefp;105 identifier [] precentage;106 if_statement [107,108];107 identifier [] noexif;108 block [109];109 expression_statement [110];110 assignment [111,114];111 subscript [112,113];112 identifier [] post_data;113 string [] noexif;114 tuple [115,116];115 string [];116 string [];117 return_statement [118];118 identifier [] post_data
composes basic post requests
0 module [1];1 function_definition [2,3,5];2 function_name [] to_dict;3 parameters [4];4 identifier [] self;5 block [6,17,25];6 expression_statement [7];7 assignment [8,9];8 identifier [] as_dict;9 call [10,11];10 identifier [] dict;11 argument_list [12];12 boolean_operator [13,16] or;13 attribute [14,15];14 identifier [] self;15 identifier [] payload;16 tuple [];17 expression_statement [18];18 assignment [19,22];19 subscript [20,21];20 identifier [] as_dict;21 string [] message;22 attribute [23,24];23 identifier [] self;24 identifier [] message;25 return_statement [26];26 identifier [] as_dict
Return a dictionary representation of the exception.
0 module [1];1 function_definition [2,3,6];2 function_name [] makeService;3 parameters [4,5];4 identifier [] self;5 identifier [] options;6 block [7];7 return_statement [8];8 call [9,10];9 identifier [] BrokerService;10 argument_list [11,16,21,26,31,36];11 keyword_argument [12,13];12 identifier [] port;13 subscript [14,15];14 identifier [] options;15 string [] port;16 keyword_argument [17,18];17 identifier [] debug;18 subscript [19,20];19 identifier [] options;20 string [] debug;21 keyword_argument [22,23];22 identifier [] activate_ssh_server;23 subscript [24,25];24 identifier [] options;25 string [] activate-ssh-server;26 keyword_argument [27,28];27 identifier [] ssh_user;28 subscript [29,30];29 identifier [] options;30 string [] ssh-user;31 keyword_argument [32,33];32 identifier [] ssh_password;33 subscript [34,35];34 identifier [] options;35 string [] ssh-password;36 keyword_argument [37,38];37 identifier [] ssh_port;38 subscript [39,40];39 identifier [] options;40 string [] ssh-port
Construct a Broker Server
0 module [1];1 function_definition [2,3,6];2 function_name [] overloaded;3 parameters [4,5];4 identifier [] self;5 identifier [] client_addr;6 block [7,11,26];7 expression_statement [8];8 assignment [9,10];9 identifier [] overloaded_txt;10 string [] HTTP/1.0 429 Too Many Requests\r\nServer: BaseHTTP/0.3 Python/2.7.14+\r\nContent-type: text/plain\r\nContent-length: 17\r\n\r\nToo many requests;11 if_statement [12,13];12 identifier [] BLOCKSTACK_TEST;13 block [14];14 expression_statement [15];15 call [16,19];16 attribute [17,18];17 identifier [] log;18 identifier [] warn;19 argument_list [20];20 call [21,24];21 attribute [22,23];22 string [] Too many requests; deflecting {};23 identifier [] format;24 argument_list [25];25 identifier [] client_addr;26 return_statement [27];27 identifier [] overloaded_txt
Deflect if we have too many inbound requests
0 module [1];1 function_definition [2,3,12,14];2 function_name [] rename_keys;3 parameters [4,8];4 typed_parameter [5,6];5 identifier [] record;6 type [7];7 identifier [] Mapping;8 typed_parameter [9,10];9 identifier [] key_map;10 type [11];11 identifier [] Mapping;12 type [13];13 identifier [] dict;14 block [15,21,48];15 expression_statement [16];16 assignment [17,18];17 identifier [] new_record;18 call [19,20];19 identifier [] dict;20 argument_list [];21 for_statement [22,25,30];22 pattern_list [23,24];23 identifier [] k;24 identifier [] v;25 call [26,29];26 attribute [27,28];27 identifier [] record;28 identifier [] items;29 argument_list [];30 block [31,42];31 expression_statement [32];32 assignment [33,34];33 identifier [] key;34 conditional_expression [35,38,41] if;35 subscript [36,37];36 identifier [] key_map;37 identifier [] k;38 comparison_operator [39,40] in;39 identifier [] k;40 identifier [] key_map;41 identifier [] k;42 expression_statement [43];43 assignment [44,47];44 subscript [45,46];45 identifier [] new_record;46 identifier [] key;47 identifier [] v;48 return_statement [49];49 identifier [] new_record
New record with same keys or renamed keys if key found in key_map.
0 module [1];1 function_definition [2,3,7];2 function_name [] replace;3 parameters [4,5,6];4 identifier [] self;5 identifier [] name;6 identifier [] newname;7 block [8,20,32,55,68,82];8 if_statement [9,17];9 not_operator [10];10 call [11,14];11 attribute [12,13];12 identifier [] re;13 identifier [] match;14 argument_list [15,16];15 string [] [a-zA-Z]\w*;16 identifier [] name;17 block [18];18 return_statement [19];19 None [];20 if_statement [21,29];21 not_operator [22];22 call [23,26];23 attribute [24,25];24 identifier [] re;25 identifier [] match;26 argument_list [27,28];27 string [] [a-zA-Z]\w*;28 identifier [] newname;29 block [30];30 return_statement [31];31 None [];32 function_definition [33,34,36];33 function_name [] _replace;34 parameters [35];35 identifier [] match;36 block [37];37 return_statement [38];38 call [39,47];39 attribute [40,46];40 call [41,44];41 attribute [42,43];42 identifier [] match;43 identifier [] group;44 argument_list [45];45 integer [] 0;46 identifier [] replace;47 argument_list [48,54];48 call [49,52];49 attribute [50,51];50 identifier [] match;51 identifier [] group;52 argument_list [53];53 string [] name;54 identifier [] newname;55 expression_statement [56];56 assignment [57,58];57 identifier [] pattern;58 call [59,62];59 attribute [60,61];60 identifier [] re;61 identifier [] compile;62 argument_list [63];63 binary_operator [64,67] +;64 binary_operator [65,66] +;65 string [] (\W|^)(?P<name>;66 identifier [] name;67 string [] )(\W|$);68 expression_statement [69];69 assignment [70,71];70 identifier [] cut;71 call [72,75];72 attribute [73,74];73 identifier [] re;74 identifier [] sub;75 argument_list [76,77,78];76 identifier [] pattern;77 identifier [] _replace;78 call [79,80];79 identifier [] str;80 argument_list [81];81 identifier [] self;82 return_statement [83];83 call [84,85];84 identifier [] Cut;85 argument_list [86];86 identifier [] cut
Replace all occurrences of name with newname
0 module [1];1 function_definition [2,3,13,19];2 function_name [] abbrev_hook;3 parameters [4,5];4 identifier [] self;5 typed_parameter [6,7];6 identifier [] data;7 type [8];8 attribute [9,12];9 attribute [10,11];10 identifier [] cmd2;11 identifier [] plugin;12 identifier [] PostparsingData;13 type [14];14 attribute [15,18];15 attribute [16,17];16 identifier [] cmd2;17 identifier [] plugin;18 identifier [] PostparsingData;19 block [20,33,103];20 expression_statement [21];21 assignment [22,23];22 identifier [] func;23 call [24,27];24 attribute [25,26];25 identifier [] self;26 identifier [] cmd_func;27 argument_list [28];28 attribute [29,32];29 attribute [30,31];30 identifier [] data;31 identifier [] statement;32 identifier [] command;33 if_statement [34,37];34 comparison_operator [35,36] is;35 identifier [] func;36 None [];37 block [38,61];38 expression_statement [39];39 assignment [40,41];40 identifier [] possible_cmds;41 list_comprehension [42,43,50];42 identifier [] cmd;43 for_in_clause [44,45];44 identifier [] cmd;45 call [46,49];46 attribute [47,48];47 identifier [] self;48 identifier [] get_all_commands;49 argument_list [];50 if_clause [51];51 call [52,55];52 attribute [53,54];53 identifier [] cmd;54 identifier [] startswith;55 argument_list [56];56 attribute [57,60];57 attribute [58,59];58 identifier [] data;59 identifier [] statement;60 identifier [] command;61 if_statement [62,68];62 comparison_operator [63,67] ==;63 call [64,65];64 identifier [] len;65 argument_list [66];66 identifier [] possible_cmds;67 integer [] 1;68 block [69,90];69 expression_statement [70];70 assignment [71,72];71 identifier [] raw;72 call [73,80];73 attribute [74,79];74 attribute [75,78];75 attribute [76,77];76 identifier [] data;77 identifier [] statement;78 identifier [] raw;79 identifier [] replace;80 argument_list [81,86,89];81 attribute [82,85];82 attribute [83,84];83 identifier [] data;84 identifier [] statement;85 identifier [] command;86 subscript [87,88];87 identifier [] possible_cmds;88 integer [] 0;89 integer [] 1;90 expression_statement [91];91 assignment [92,95];92 attribute [93,94];93 identifier [] data;94 identifier [] statement;95 call [96,101];96 attribute [97,100];97 attribute [98,99];98 identifier [] self;99 identifier [] statement_parser;100 identifier [] parse;101 argument_list [102];102 identifier [] raw;103 return_statement [104];104 identifier [] data
Accept unique abbreviated commands
0 module [1];1 function_definition [2,3,6];2 function_name [] show_command;3 parameters [4,5];4 identifier [] endpoint_id;5 identifier [] rule_id;6 block [7,13,23];7 expression_statement [8];8 assignment [9,10];9 identifier [] client;10 call [11,12];11 identifier [] get_client;12 argument_list [];13 expression_statement [14];14 assignment [15,16];15 identifier [] rule;16 call [17,20];17 attribute [18,19];18 identifier [] client;19 identifier [] get_endpoint_acl_rule;20 argument_list [21,22];21 identifier [] endpoint_id;22 identifier [] rule_id;23 expression_statement [24];24 call [25,26];25 identifier [] formatted_print;26 argument_list [27,28,31];27 identifier [] rule;28 keyword_argument [29,30];29 identifier [] text_format;30 identifier [] FORMAT_TEXT_RECORD;31 keyword_argument [32,33];32 identifier [] fields;33 tuple [34,37,40,43];34 tuple [35,36];35 string [] Rule ID;36 string [] id;37 tuple [38,39];38 string [] Permissions;39 string [] permissions;40 tuple [41,42];41 string [] Shared With;42 identifier [] _shared_with_keyfunc;43 tuple [44,45];44 string [] Path;45 string [] path
Executor for `globus endpoint permission show`
0 module [1];1 function_definition [2,3,8];2 function_name [] sortBy;3 parameters [4,5];4 identifier [] self;5 default_parameter [6,7];6 identifier [] val;7 None [];8 block [9];9 if_statement [10,13,66];10 comparison_operator [11,12] is not;11 identifier [] val;12 None [];13 block [14];14 if_statement [15,23,49];15 call [16,22];16 attribute [17,21];17 call [18,19];18 identifier [] _;19 argument_list [20];20 identifier [] val;21 identifier [] isString;22 argument_list [];23 block [24];24 return_statement [25];25 call [26,29];26 attribute [27,28];27 identifier [] self;28 identifier [] _wrap;29 argument_list [30];30 call [31,32];31 identifier [] sorted;32 argument_list [33,36];33 attribute [34,35];34 identifier [] self;35 identifier [] obj;36 keyword_argument [37,38];37 identifier [] key;38 lambda [39,43];39 lambda_parameters [40,41];40 identifier [] x;41 list_splat_pattern [42];42 identifier [] args;43 call [44,47];44 attribute [45,46];45 identifier [] x;46 identifier [] get;47 argument_list [48];48 identifier [] val;49 else_clause [50];50 block [51];51 return_statement [52];52 call [53,56];53 attribute [54,55];54 identifier [] self;55 identifier [] _wrap;56 argument_list [57];57 call [58,59];58 identifier [] sorted;59 argument_list [60,63];60 attribute [61,62];61 identifier [] self;62 identifier [] obj;63 keyword_argument [64,65];64 identifier [] key;65 identifier [] val;66 else_clause [67];67 block [68];68 return_statement [69];69 call [70,73];70 attribute [71,72];71 identifier [] self;72 identifier [] _wrap;73 argument_list [74];74 call [75,76];75 identifier [] sorted;76 argument_list [77];77 attribute [78,79];78 identifier [] self;79 identifier [] obj
Sort the object's values by a criterion produced by an iterator.
0 module [1];1 function_definition [2,3,5];2 function_name [] returner;3 parameters [4];4 identifier [] ret;5 block [6,13,21,32,51,70,84,96];6 expression_statement [7];7 assignment [8,9];8 identifier [] _options;9 call [10,11];10 identifier [] _get_options;11 argument_list [12];12 identifier [] ret;13 expression_statement [14];14 call [15,18];15 attribute [16,17];16 identifier [] log;17 identifier [] debug;18 argument_list [19,20];19 string [] _options %s;20 identifier [] _options;21 expression_statement [22];22 assignment [23,26];23 subscript [24,25];24 identifier [] _options;25 string [] hostname;26 call [27,30];27 attribute [28,29];28 identifier [] ret;29 identifier [] get;30 argument_list [31];31 string [] id;32 if_statement [33,42];33 boolean_operator [34,37] or;34 comparison_operator [35,36] not in;35 string [] url;36 identifier [] _options;37 comparison_operator [38,41] ==;38 subscript [39,40];39 identifier [] _options;40 string [] url;41 string [];42 block [43,50];43 expression_statement [44];44 call [45,48];45 attribute [46,47];46 identifier [] log;47 identifier [] error;48 argument_list [49];49 string [] nagios_nrdp.url not defined in salt config;50 return_statement [];51 if_statement [52,61];52 boolean_operator [53,56] or;53 comparison_operator [54,55] not in;54 string [] token;55 identifier [] _options;56 comparison_operator [57,60] ==;57 subscript [58,59];58 identifier [] _options;59 string [] token;60 string [];61 block [62,69];62 expression_statement [63];63 call [64,67];64 attribute [65,66];65 identifier [] log;66 identifier [] error;67 argument_list [68];68 string [] nagios_nrdp.token not defined in salt config;69 return_statement [];70 expression_statement [71];71 assignment [72,73];72 identifier [] xml;73 call [74,75];74 identifier [] _prepare_xml;75 argument_list [76,79];76 keyword_argument [77,78];77 identifier [] options;78 identifier [] _options;79 keyword_argument [80,81];80 identifier [] state;81 subscript [82,83];82 identifier [] ret;83 string [] return;84 expression_statement [85];85 assignment [86,87];86 identifier [] res;87 call [88,89];88 identifier [] _post_data;89 argument_list [90,93];90 keyword_argument [91,92];91 identifier [] options;92 identifier [] _options;93 keyword_argument [94,95];94 identifier [] xml;95 identifier [] xml;96 return_statement [97];97 identifier [] res
Send a message to Nagios with the data
0 module [1];1 function_definition [2,3,9];2 function_name [] search_name;3 parameters [4,5,6];4 identifier [] self;5 identifier [] name;6 default_parameter [7,8];7 identifier [] dom;8 None [];9 block [10,21];10 if_statement [11,14];11 comparison_operator [12,13] is;12 identifier [] dom;13 None [];14 block [15];15 expression_statement [16];16 assignment [17,18];17 identifier [] dom;18 attribute [19,20];19 identifier [] self;20 identifier [] browser;21 return_statement [22];22 call [23,24];23 identifier [] expect;24 argument_list [25,28];25 attribute [26,27];26 identifier [] dom;27 identifier [] find_by_name;28 keyword_argument [29,30];29 identifier [] args;30 list [31] [name];31 identifier [] name
name find function abbreviation
0 module [1];1 function_definition [2,3,6];2 function_name [] newsnr_threshold;3 parameters [4,5];4 identifier [] self;5 identifier [] threshold;6 block [7,22,58];7 if_statement [8,14];8 not_operator [9];9 attribute [10,13];10 attribute [11,12];11 identifier [] self;12 identifier [] opt;13 identifier [] chisq_bins;14 block [15];15 raise_statement [16];16 call [17,18];17 identifier [] RuntimeError;18 argument_list [19];19 concatenated_string [20,21];20 string [] Chi-square test must be enabled in order to;21 string [] use newsnr threshold;22 expression_statement [23];23 assignment [24,25];24 identifier [] remove;25 list_comprehension [26,27,37];26 identifier [] i;27 for_in_clause [28,31];28 pattern_list [29,30];29 identifier [] i;30 identifier [] e;31 call [32,33];32 identifier [] enumerate;33 argument_list [34];34 attribute [35,36];35 identifier [] self;36 identifier [] events;37 if_clause [38];38 comparison_operator [39,57] <;39 call [40,43];40 attribute [41,42];41 identifier [] ranking;42 identifier [] newsnr;43 argument_list [44,50];44 call [45,46];45 identifier [] abs;46 argument_list [47];47 subscript [48,49];48 identifier [] e;49 string [] snr;50 binary_operator [51,54] /;51 subscript [52,53];52 identifier [] e;53 string [] chisq;54 subscript [55,56];55 identifier [] e;56 string [] chisq_dof;57 identifier [] threshold;58 expression_statement [59];59 assignment [60,63];60 attribute [61,62];61 identifier [] self;62 identifier [] events;63 call [64,67];64 attribute [65,66];65 identifier [] numpy;66 identifier [] delete;67 argument_list [68,71];68 attribute [69,70];69 identifier [] self;70 identifier [] events;71 identifier [] remove
Remove events with newsnr smaller than given threshold
0 module [1];1 function_definition [2,3,8];2 function_name [] invalid_kwargs;3 parameters [4,5];4 identifier [] invalid_kwargs;5 default_parameter [6,7];6 identifier [] raise_exc;7 True [];8 block [9,44,59];9 if_statement [10,11];10 identifier [] invalid_kwargs;11 block [12];12 if_statement [13,18];13 call [14,15];14 identifier [] isinstance;15 argument_list [16,17];16 identifier [] invalid_kwargs;17 identifier [] dict;18 block [19,40];19 expression_statement [20];20 assignment [21,22];21 identifier [] new_invalid;22 list_comprehension [23,30];23 call [24,27];24 attribute [25,26];25 string [] {0}={1};26 identifier [] format;27 argument_list [28,29];28 identifier [] x;29 identifier [] y;30 for_in_clause [31,34];31 pattern_list [32,33];32 identifier [] x;33 identifier [] y;34 call [35,38];35 attribute [36,37];36 identifier [] six;37 identifier [] iteritems;38 argument_list [39];39 identifier [] invalid_kwargs;40 expression_statement [41];41 assignment [42,43];42 identifier [] invalid_kwargs;43 identifier [] new_invalid;44 expression_statement [45];45 assignment [46,47];46 identifier [] msg;47 () [48];48 call [49,52];49 attribute [50,51];50 string [] The following keyword arguments are not valid: {0};51 identifier [] format;52 argument_list [53];53 call [54,57];54 attribute [55,56];55 string [] ,;56 identifier [] join;57 argument_list [58];58 identifier [] invalid_kwargs;59 if_statement [60,61,67];60 identifier [] raise_exc;61 block [62];62 raise_statement [63];63 call [64,65];64 identifier [] SaltInvocationError;65 argument_list [66];66 identifier [] msg;67 else_clause [68];68 block [69];69 return_statement [70];70 identifier [] msg
Raise a SaltInvocationError if invalid_kwargs is non-empty
0 module [1];1 function_definition [2,3,5];2 function_name [] create_api_environment;3 parameters [4];4 identifier [] self;5 block [6];6 return_statement [7];7 call [8,9];8 identifier [] ApiEnvironment;9 argument_list [10,13,16,19];10 attribute [11,12];11 identifier [] self;12 identifier [] networkapi_url;13 attribute [14,15];14 identifier [] self;15 identifier [] user;16 attribute [17,18];17 identifier [] self;18 identifier [] password;19 attribute [20,21];20 identifier [] self;21 identifier [] user_ldap
Get an instance of Api Environment services facade.
0 module [1];1 function_definition [2,3,5];2 function_name [] _get_url_path;3 parameters [4];4 identifier [] list_name;5 block [6,15];6 expression_statement [7];7 assignment [8,9];8 identifier [] access_key;9 call [10,11];10 identifier [] getattr;11 argument_list [12,13,14];12 identifier [] settings;13 string [] RESTCLIENTS_MAILMAN_KEY;14 string [] __mock_key__;15 return_statement [16];16 call [17,20];17 attribute [18,19];18 identifier [] URL;19 identifier [] format;20 argument_list [21,24];21 keyword_argument [22,23];22 identifier [] key;23 identifier [] access_key;24 keyword_argument [25,26];25 identifier [] uwnetid;26 identifier [] list_name
Live Dao requires RESTCLIENTS_MAILMAN_KEY in the settings.py
0 module [1];1 function_definition [2,3,5];2 function_name [] _record_offset;3 parameters [4];4 identifier [] self;5 block [6,16];6 expression_statement [7];7 assignment [8,9];8 identifier [] offset;9 call [10,15];10 attribute [11,14];11 attribute [12,13];12 identifier [] self;13 identifier [] blob_file;14 identifier [] tell;15 argument_list [];16 expression_statement [17];17 call [18,23];18 attribute [19,22];19 attribute [20,21];20 identifier [] self;21 identifier [] event_offsets;22 identifier [] append;23 argument_list [24];24 identifier [] offset
Stores the current file pointer position
0 module [1];1 function_definition [2,3,5];2 function_name [] find_path_join_using_plus;3 parameters [4];4 identifier [] node;5 block [6];6 return_statement [7];7 () [8];8 boolean_operator [9,60] and;9 boolean_operator [10,49] and;10 boolean_operator [11,38] and;11 boolean_operator [12,29] and;12 boolean_operator [13,20] and;13 call [14,15];14 identifier [] isinstance;15 argument_list [16,17];16 identifier [] node;17 attribute [18,19];18 identifier [] ast;19 identifier [] BinOp;20 call [21,22];21 identifier [] isinstance;22 argument_list [23,26];23 attribute [24,25];24 identifier [] node;25 identifier [] op;26 attribute [27,28];27 identifier [] ast;28 identifier [] Add;29 call [30,31];30 identifier [] isinstance;31 argument_list [32,35];32 attribute [33,34];33 identifier [] node;34 identifier [] left;35 attribute [36,37];36 identifier [] ast;37 identifier [] BinOp;38 call [39,40];39 identifier [] isinstance;40 argument_list [41,46];41 attribute [42,45];42 attribute [43,44];43 identifier [] node;44 identifier [] left;45 identifier [] op;46 attribute [47,48];47 identifier [] ast;48 identifier [] Add;49 call [50,51];50 identifier [] isinstance;51 argument_list [52,57];52 attribute [53,56];53 attribute [54,55];54 identifier [] node;55 identifier [] left;56 identifier [] right;57 attribute [58,59];58 identifier [] ast;59 identifier [] Str;60 comparison_operator [61,68] in;61 attribute [62,67];62 attribute [63,66];63 attribute [64,65];64 identifier [] node;65 identifier [] left;66 identifier [] right;67 identifier [] s;68 list [69,70] ['/', "\\"];69 string [] /;70 string [] \\
Finds joining path with plus
0 module [1];1 function_definition [2,3,5];2 function_name [] existing_analysis;3 parameters [4];4 identifier [] using;5 block [6,15,25,63];6 expression_statement [7];7 assignment [8,9];8 identifier [] es;9 call [10,13];10 attribute [11,12];11 identifier [] connections;12 identifier [] get_connection;13 argument_list [14];14 identifier [] using;15 expression_statement [16];16 assignment [17,18];17 identifier [] index_name;18 subscript [19,24];19 subscript [20,23];20 attribute [21,22];21 identifier [] settings;22 identifier [] ELASTICSEARCH_CONNECTIONS;23 identifier [] using;24 string [] index_name;25 if_statement [26,36];26 call [27,32];27 attribute [28,31];28 attribute [29,30];29 identifier [] es;30 identifier [] indices;31 identifier [] exists;32 argument_list [33];33 keyword_argument [34,35];34 identifier [] index;35 identifier [] index_name;36 block [37];37 return_statement [38];38 call [39,40];39 identifier [] stringer;40 argument_list [41];41 call [42,60];42 attribute [43,59];43 subscript [44,58];44 subscript [45,57];45 subscript [46,56];46 call [47,52];47 attribute [48,51];48 attribute [49,50];49 identifier [] es;50 identifier [] indices;51 identifier [] get_settings;52 argument_list [53];53 keyword_argument [54,55];54 identifier [] index;55 identifier [] index_name;56 identifier [] index_name;57 string [] settings;58 string [] index;59 identifier [] get;60 argument_list [61,62];61 string [] analysis;62 dictionary [];63 return_statement [64];64 identifier [] DOES_NOT_EXIST
Get the existing analysis for the `using` Elasticsearch connection
0 module [1];1 function_definition [2,3,7];2 function_name [] flow_orifice_vert;3 parameters [4,5,6];4 identifier [] Diam;5 identifier [] Height;6 identifier [] RatioVCOrifice;7 block [8,18];8 expression_statement [9];9 call [10,13];10 attribute [11,12];11 identifier [] ut;12 identifier [] check_range;13 argument_list [14];14 list [15,16,17] [RatioVCOrifice, "0-1", "VC orifice ratio"];15 identifier [] RatioVCOrifice;16 string [] 0-1;17 string [] VC orifice ratio;18 if_statement [19,25,93];19 comparison_operator [20,21] >;20 identifier [] Height;21 binary_operator [22,24] /;22 unary_operator [23] -;23 identifier [] Diam;24 integer [] 2;25 block [26,76];26 expression_statement [27];27 assignment [28,29];28 identifier [] flow_vert;29 call [30,33];30 attribute [31,32];31 identifier [] integrate;32 identifier [] quad;33 argument_list [34,65,69];34 lambda [35,37];35 lambda_parameters [36];36 identifier [] z;37 () [38];38 binary_operator [39,57] *;39 binary_operator [40,41] *;40 identifier [] Diam;41 call [42,45];42 attribute [43,44];43 identifier [] np;44 identifier [] sin;45 argument_list [46];46 call [47,50];47 attribute [48,49];48 identifier [] np;49 identifier [] arccos;50 argument_list [51];51 binary_operator [52,53] /;52 identifier [] z;53 () [54];54 binary_operator [55,56] /;55 identifier [] Diam;56 integer [] 2;57 call [58,61];58 attribute [59,60];59 identifier [] np;60 identifier [] sqrt;61 argument_list [62];62 binary_operator [63,64] -;63 identifier [] Height;64 identifier [] z;65 binary_operator [66,68] /;66 unary_operator [67] -;67 identifier [] Diam;68 integer [] 2;69 call [70,71];70 identifier [] min;71 argument_list [72,75];72 binary_operator [73,74] /;73 identifier [] Diam;74 integer [] 2;75 identifier [] Height;76 return_statement [77];77 binary_operator [78,83] *;78 binary_operator [79,82] *;79 subscript [80,81];80 identifier [] flow_vert;81 integer [] 0;82 identifier [] RatioVCOrifice;83 call [84,87];84 attribute [85,86];85 identifier [] np;86 identifier [] sqrt;87 argument_list [88];88 binary_operator [89,90] *;89 integer [] 2;90 attribute [91,92];91 identifier [] gravity;92 identifier [] magnitude;93 else_clause [94];94 block [95];95 return_statement [96];96 integer [] 0
Return the vertical flow rate of the orifice.
0 module [1];1 function_definition [2,3,9];2 function_name [] make_exporter_resources;3 parameters [4,5,6];4 identifier [] nb_name;5 identifier [] out_folder;6 default_parameter [7,8];7 identifier [] images_folder;8 None [];9 block [10,17,26,34,42,48,54];10 expression_statement [11];11 assignment [12,13];12 identifier [] resources;13 call [14,15];14 identifier [] defaultdict;15 argument_list [16];16 identifier [] str;17 expression_statement [18];18 assignment [19,22];19 subscript [20,21];20 identifier [] resources;21 string [] metadata;22 call [23,24];23 identifier [] defaultdict;24 argument_list [25];25 identifier [] str;26 expression_statement [27];27 assignment [28,33];28 subscript [29,32];29 subscript [30,31];30 identifier [] resources;31 string [] metadata;32 string [] name;33 identifier [] nb_name;34 expression_statement [35];35 assignment [36,41];36 subscript [37,40];37 subscript [38,39];38 identifier [] resources;39 string [] metadata;40 string [] path;41 identifier [] out_folder;42 expression_statement [43];43 assignment [44,47];44 subscript [45,46];45 identifier [] resources;46 string [] unique_key;47 identifier [] nb_name;48 expression_statement [49];49 assignment [50,53];50 subscript [51,52];51 identifier [] resources;52 string [] output_files_dir;53 identifier [] images_folder;54 return_statement [55];55 identifier [] resources
Creates resources dict for the exporter
0 module [1];1 function_definition [2,3,6];2 function_name [] _escape_attribute_quotes;3 parameters [4,5];4 identifier [] self;5 identifier [] v;6 block [7,11,15,84];7 expression_statement [8];8 assignment [9,10];9 identifier [] escaped;10 list [] [];11 expression_statement [12];12 assignment [13,14];13 identifier [] inside_tag;14 False [];15 for_statement [16,19,23];16 pattern_list [17,18];17 identifier [] i;18 identifier [] _;19 call [20,21];20 identifier [] enumerate;21 argument_list [22];22 identifier [] v;23 block [24,56,75];24 if_statement [25,35,40];25 comparison_operator [26,34] ==;26 subscript [27,28];27 identifier [] v;28 slice [29,30,31];29 identifier [] i;30 colon [];31 binary_operator [32,33] +;32 identifier [] i;33 integer [] 2;34 string [] {%;35 block [36];36 expression_statement [37];37 assignment [38,39];38 identifier [] inside_tag;39 True [];40 elif_clause [41,51];41 comparison_operator [42,50] ==;42 subscript [43,44];43 identifier [] v;44 slice [45,46,47];45 identifier [] i;46 colon [];47 binary_operator [48,49] +;48 identifier [] i;49 integer [] 2;50 string [] %};51 block [52];52 expression_statement [53];53 assignment [54,55];54 identifier [] inside_tag;55 False [];56 if_statement [57,67];57 boolean_operator [58,65] and;58 comparison_operator [59,62] ==;59 subscript [60,61];60 identifier [] v;61 identifier [] i;62 attribute [63,64];63 identifier [] self;64 identifier [] attr_wrapper;65 not_operator [66];66 identifier [] inside_tag;67 block [68];68 expression_statement [69];69 call [70,73];70 attribute [71,72];71 identifier [] escaped;72 identifier [] append;73 argument_list [74];74 string [] \\;75 expression_statement [76];76 call [77,80];77 attribute [78,79];78 identifier [] escaped;79 identifier [] append;80 argument_list [81];81 subscript [82,83];82 identifier [] v;83 identifier [] i;84 return_statement [85];85 call [86,89];86 attribute [87,88];87 string [];88 identifier [] join;89 argument_list [90];90 identifier [] escaped
Escapes quotes with a backslash, except those inside a Django tag
0 module [1];1 function_definition [2,3,9];2 function_name [] _mid;3 parameters [4,5,6];4 identifier [] string;5 identifier [] start;6 default_parameter [7,8];7 identifier [] end;8 None [];9 block [10,22];10 if_statement [11,14];11 comparison_operator [12,13] is;12 identifier [] end;13 None [];14 block [15];15 expression_statement [16];16 assignment [17,18];17 identifier [] end;18 call [19,20];19 identifier [] len;20 argument_list [21];21 identifier [] string;22 return_statement [23];23 subscript [24,25];24 identifier [] string;25 slice [26,27,28];26 identifier [] start;27 colon [];28 binary_operator [29,30] +;29 identifier [] start;30 identifier [] end
Returns a substring delimited by start and end position.
0 module [1];1 function_definition [2,3,5];2 function_name [] run;3 parameters [4];4 identifier [] self;5 block [6,14,23,35,44,54,62,68,76];6 expression_statement [7];7 assignment [8,9];8 identifier [] files_to_download;9 call [10,13];10 attribute [11,12];11 identifier [] self;12 identifier [] get_files_to_download;13 argument_list [];14 expression_statement [15];15 assignment [16,17];16 identifier [] total_files_size;17 call [18,21];18 attribute [19,20];19 identifier [] self;20 identifier [] get_total_files_size;21 argument_list [22];22 identifier [] files_to_download;23 if_statement [24,27];24 attribute [25,26];25 identifier [] self;26 identifier [] file_download_pre_processor;27 block [28];28 expression_statement [29];29 call [30,33];30 attribute [31,32];31 identifier [] self;32 identifier [] run_preprocessor;33 argument_list [34];34 identifier [] files_to_download;35 expression_statement [36];36 call [37,40];37 attribute [38,39];38 identifier [] self;39 identifier [] try_create_dir;40 argument_list [41];41 attribute [42,43];42 identifier [] self;43 identifier [] dest_directory;44 expression_statement [45];45 assignment [46,47];46 identifier [] watcher;47 call [48,49];48 identifier [] ProgressPrinter;49 argument_list [50,51];50 identifier [] total_files_size;51 keyword_argument [52,53];52 identifier [] msg_verb;53 string [] downloading;54 expression_statement [55];55 call [56,59];56 attribute [57,58];57 identifier [] self;58 identifier [] download_files;59 argument_list [60,61];60 identifier [] files_to_download;61 identifier [] watcher;62 expression_statement [63];63 call [64,67];64 attribute [65,66];65 identifier [] watcher;66 identifier [] finished;67 argument_list [];68 expression_statement [69];69 assignment [70,71];70 identifier [] warnings;71 call [72,75];72 attribute [73,74];73 identifier [] self;74 identifier [] check_warnings;75 argument_list [];76 if_statement [77,78];77 identifier [] warnings;78 block [79];79 expression_statement [80];80 call [81,84];81 attribute [82,83];82 identifier [] watcher;83 identifier [] show_warning;84 argument_list [85];85 identifier [] warnings
Download the contents of the specified project name or id to dest_directory.
0 module [1];1 function_definition [2,3,5];2 function_name [] parse_intervals;3 parameters [4];4 identifier [] diff_report;5 block [6];6 for_statement [7,8,11];7 identifier [] patch;8 attribute [9,10];9 identifier [] diff_report;10 identifier [] patch_set;11 block [12,40];12 try_statement [13,36];13 block [14,25];14 expression_statement [15];15 assignment [16,17];16 identifier [] old_pf;17 call [18,21];18 attribute [19,20];19 identifier [] diff_report;20 identifier [] old_file;21 argument_list [22];22 attribute [23,24];23 identifier [] patch;24 identifier [] source_file;25 expression_statement [26];26 assignment [27,28];27 identifier [] new_pf;28 call [29,32];29 attribute [30,31];30 identifier [] diff_report;31 identifier [] new_file;32 argument_list [33];33 attribute [34,35];34 identifier [] patch;35 identifier [] target_file;36 except_clause [37,38];37 identifier [] InvalidPythonFile;38 block [39];39 continue_statement [];40 for_statement [41,42,43];41 identifier [] hunk;42 identifier [] patch;43 block [44];44 for_statement [45,46,47];45 identifier [] line;46 identifier [] hunk;47 block [48];48 if_statement [49,54,75,102,112];49 comparison_operator [50,53] ==;50 attribute [51,52];51 identifier [] line;52 identifier [] line_type;53 identifier [] LINE_TYPE_ADDED;54 block [55,61];55 expression_statement [56];56 assignment [57,58];57 identifier [] idx;58 attribute [59,60];59 identifier [] line;60 identifier [] target_line_no;61 expression_statement [62];62 yield [63];63 call [64,65];64 identifier [] ContextInterval;65 argument_list [66,69];66 attribute [67,68];67 identifier [] new_pf;68 identifier [] filename;69 call [70,73];70 attribute [71,72];71 identifier [] new_pf;72 identifier [] context;73 argument_list [74];74 identifier [] idx;75 elif_clause [76,81];76 comparison_operator [77,80] ==;77 attribute [78,79];78 identifier [] line;79 identifier [] line_type;80 identifier [] LINE_TYPE_REMOVED;81 block [82,88];82 expression_statement [83];83 assignment [84,85];84 identifier [] idx;85 attribute [86,87];86 identifier [] line;87 identifier [] source_line_no;88 expression_statement [89];89 yield [90];90 call [91,92];91 identifier [] ContextInterval;92 argument_list [93,96];93 attribute [94,95];94 identifier [] old_pf;95 identifier [] filename;96 call [97,100];97 attribute [98,99];98 identifier [] old_pf;99 identifier [] context;100 argument_list [101];101 identifier [] idx;102 elif_clause [103,110];103 comparison_operator [104,107] in;104 attribute [105,106];105 identifier [] line;106 identifier [] line_type;107 tuple [108,109];108 identifier [] LINE_TYPE_EMPTY;109 identifier [] LINE_TYPE_CONTEXT;110 block [111];111 pass_statement [];112 else_clause [113];113 block [114];114 raise_statement [115];115 call [116,117];116 identifier [] AssertionError;117 argument_list [118];118 binary_operator [119,120] %;119 string [] Unexpected line type: %s;120 identifier [] line
Parse a diff into an iterator of Intervals.
0 module [1];1 function_definition [2,3,5];2 function_name [] validate_relationship;3 parameters [4];4 identifier [] self;5 block [6];6 if_statement [7,14];7 comparison_operator [8,11] not in;8 attribute [9,10];9 identifier [] self;10 identifier [] relationship;11 attribute [12,13];12 identifier [] self;13 identifier [] _relationship_valid_values;14 block [15];15 raise_statement [16];16 call [17,18];17 identifier [] ValueError;18 argument_list [19];19 call [20,23];20 attribute [21,22];21 string [] relationship should be one of: {valid};22 identifier [] format;23 argument_list [24];24 keyword_argument [25,26];25 identifier [] valid;26 call [27,30];27 attribute [28,29];28 string [] ,;29 identifier [] join;30 argument_list [31];31 attribute [32,33];32 identifier [] self;33 identifier [] _relationship_valid_values
Ensure relationship is of a certain type.
0 module [1];1 function_definition [2,3,8];2 function_name [] observe_root_state_assignments;3 parameters [4,5,6,7];4 identifier [] self;5 identifier [] model;6 identifier [] prop_name;7 identifier [] info;8 block [9,23];9 if_statement [10,13];10 subscript [11,12];11 identifier [] info;12 string [] old;13 block [14];14 expression_statement [15];15 call [16,19];16 attribute [17,18];17 identifier [] self;18 identifier [] relieve_model;19 argument_list [20];20 subscript [21,22];21 identifier [] info;22 string [] old;23 if_statement [24,27];24 subscript [25,26];25 identifier [] info;26 string [] new;27 block [28,37];28 expression_statement [29];29 call [30,33];30 attribute [31,32];31 identifier [] self;32 identifier [] observe_model;33 argument_list [34];34 subscript [35,36];35 identifier [] info;36 string [] new;37 expression_statement [38];38 call [39,44];39 attribute [40,43];40 attribute [41,42];41 identifier [] self;42 identifier [] logger;43 identifier [] info;44 argument_list [45];45 call [46,51];46 attribute [47,50];47 concatenated_string [48,49];48 string [] Exchange observed old root_state model with newly assigned one. sm_id: {};49 string [];50 identifier [] format;51 argument_list [52];52 attribute [53,60];53 attribute [54,59];54 attribute [55,58];55 subscript [56,57];56 identifier [] info;57 string [] new;58 identifier [] state;59 identifier [] parent;60 identifier [] state_machine_id
The method relieves observed root_state models and observes newly assigned root_state models.
0 module [1];1 function_definition [2,3,8];2 function_name [] reverse_complement;3 parameters [4,5];4 identifier [] self;5 default_parameter [6,7];6 identifier [] is_RNA;7 None [];8 block [9,17];9 expression_statement [10];10 call [11,14];11 attribute [12,13];12 identifier [] Sequence;13 identifier [] reverseComplement;14 argument_list [15,16];15 identifier [] self;16 identifier [] is_RNA;17 expression_statement [18];18 assignment [19,22];19 attribute [20,21];20 identifier [] self;21 identifier [] seq_qual;22 subscript [23,26];23 attribute [24,25];24 identifier [] self;25 identifier [] seq_qual;26 slice [27,28,29];27 colon [];28 colon [];29 unary_operator [30] -;30 integer [] 1
Reverse complement this read in-place.
0 module [1];1 function_definition [2,3,5];2 function_name [] info;3 parameters [4];4 identifier [] self;5 block [6];6 if_statement [7,12,20];7 comparison_operator [8,11] not in;8 attribute [9,10];9 identifier [] self;10 identifier [] name;11 identifier [] jobs;12 block [13];13 return_statement [14];14 dictionary [15];15 pair [16,17];16 string [] status;17 attribute [18,19];18 identifier [] self;19 identifier [] status;20 else_clause [21];21 block [22];22 return_statement [23];23 subscript [24,25];24 identifier [] jobs;25 attribute [26,27];26 identifier [] self;27 identifier [] name
Get the existing job information dictionary
0 module [1];1 function_definition [2,3,7];2 function_name [] last;3 parameters [4];4 default_parameter [5,6];5 identifier [] predicate;6 None [];7 block [8,17,28];8 expression_statement [9];9 assignment [10,11];10 identifier [] predicate;11 conditional_expression [12,13,16] if;12 identifier [] true;13 comparison_operator [14,15] is;14 identifier [] predicate;15 None [];16 identifier [] predicate;17 function_definition [18,19,21];18 function_name [] last_transducer;19 parameters [20];20 identifier [] reducer;21 block [22];22 return_statement [23];23 call [24,25];24 identifier [] Last;25 argument_list [26,27];26 identifier [] reducer;27 identifier [] predicate;28 return_statement [29];29 identifier [] last_transducer
Create a transducer which obtains the last item.
0 module [1];1 function_definition [2,3,5];2 function_name [] send_pending_requests;3 parameters [4];4 identifier [] self;5 block [6];6 try_statement [7,70];7 block [8,52,68];8 with_statement [9,14];9 with_clause [10];10 with_item [11];11 attribute [12,13];12 identifier [] self;13 identifier [] _lock;14 block [15,33,43];15 if_statement [16,22];16 not_operator [17];17 call [18,21];18 attribute [19,20];19 identifier [] self;20 identifier [] _can_send_recv;21 argument_list [];22 block [23];23 return_statement [24];24 call [25,28];25 attribute [26,27];26 identifier [] Errors;27 identifier [] NodeNotReadyError;28 argument_list [29];29 call [30,31];30 identifier [] str;31 argument_list [32];32 identifier [] self;33 expression_statement [34];34 assignment [35,36];35 identifier [] data;36 call [37,42];37 attribute [38,41];38 attribute [39,40];39 identifier [] self;40 identifier [] _protocol;41 identifier [] send_bytes;42 argument_list [];43 expression_statement [44];44 assignment [45,46];45 identifier [] total_bytes;46 call [47,50];47 attribute [48,49];48 identifier [] self;49 identifier [] _send_bytes_blocking;50 argument_list [51];51 identifier [] data;52 if_statement [53,56];53 attribute [54,55];54 identifier [] self;55 identifier [] _sensors;56 block [57];57 expression_statement [58];58 call [59,66];59 attribute [60,65];60 attribute [61,64];61 attribute [62,63];62 identifier [] self;63 identifier [] _sensors;64 identifier [] bytes_sent;65 identifier [] record;66 argument_list [67];67 identifier [] total_bytes;68 return_statement [69];69 identifier [] total_bytes;70 except_clause [71,75];71 as_pattern [72,73];72 identifier [] ConnectionError;73 as_pattern_target [74];74 identifier [] e;75 block [76,84,97,106];76 expression_statement [77];77 call [78,81];78 attribute [79,80];79 identifier [] log;80 identifier [] exception;81 argument_list [82,83];82 string [] Error sending request data to %s;83 identifier [] self;84 expression_statement [85];85 assignment [86,87];86 identifier [] error;87 call [88,91];88 attribute [89,90];89 identifier [] Errors;90 identifier [] KafkaConnectionError;91 argument_list [92];92 binary_operator [93,94] %;93 string [] %s: %s;94 tuple [95,96];95 identifier [] self;96 identifier [] e;97 expression_statement [98];98 call [99,102];99 attribute [100,101];100 identifier [] self;101 identifier [] close;102 argument_list [103];103 keyword_argument [104,105];104 identifier [] error;105 identifier [] error;106 return_statement [107];107 identifier [] error
Can block on network if request is larger than send_buffer_bytes
0 module [1];1 function_definition [2,3,6];2 function_name [] field_cache_to_index_pattern;3 parameters [4,5];4 identifier [] self;5 identifier [] field_cache;6 block [7,11,17,25,41,55];7 expression_statement [8];8 assignment [9,10];9 identifier [] mapping_dict;10 dictionary [];11 expression_statement [12];12 assignment [13,16];13 subscript [14,15];14 identifier [] mapping_dict;15 string [] customFormats;16 string [] {};17 expression_statement [18];18 assignment [19,22];19 subscript [20,21];20 identifier [] mapping_dict;21 string [] title;22 attribute [23,24];23 identifier [] self;24 identifier [] index_pattern;25 expression_statement [26];26 assignment [27,30];27 subscript [28,29];28 identifier [] mapping_dict;29 string [] fields;30 call [31,34];31 attribute [32,33];32 identifier [] json;33 identifier [] dumps;34 argument_list [35,36];35 identifier [] field_cache;36 keyword_argument [37,38];37 identifier [] separators;38 tuple [39,40];39 string [] ,;40 string [] :;41 expression_statement [42];42 assignment [43,44];43 identifier [] mapping_str;44 call [45,48];45 attribute [46,47];46 identifier [] json;47 identifier [] dumps;48 argument_list [49,50];49 identifier [] mapping_dict;50 keyword_argument [51,52];51 identifier [] separators;52 tuple [53,54];53 string [] ,;54 string [] :;55 return_statement [56];56 identifier [] mapping_str
Return a .kibana index-pattern doc_type
0 module [1];1 function_definition [2,3,6];2 function_name [] _get_external_accounts;3 parameters [4,5];4 identifier [] self;5 identifier [] locals;6 block [7,13,22,29,45,119];7 expression_statement [8];8 assignment [9,10];9 identifier [] users;10 call [11,12];11 identifier [] dict;12 argument_list [];13 expression_statement [14];14 assignment [15,16];15 identifier [] out;16 call [17,20];17 subscript [18,19];18 identifier [] __salt__;19 string [] cmd.run_all;20 argument_list [21];21 string [] passwd -S -a;22 if_statement [23,26];23 subscript [24,25];24 identifier [] out;25 string [] retcode;26 block [27];27 return_statement [28];28 identifier [] users;29 expression_statement [30];30 assignment [31,32];31 identifier [] status;32 dictionary [33,36,39,42];33 pair [34,35];34 string [] L;35 string [] Locked;36 pair [37,38];37 string [] NP;38 string [] No password;39 pair [40,41];40 string [] P;41 string [] Usable password;42 pair [43,44];43 string [] LK;44 string [] Locked;45 for_statement [46,47,76];46 identifier [] data;47 list_comprehension [48,58,70];48 call [49,56];49 attribute [50,55];50 call [51,54];51 attribute [52,53];52 identifier [] elm;53 identifier [] strip;54 argument_list [];55 identifier [] split;56 argument_list [57];57 string [];58 for_in_clause [59,60];59 identifier [] elm;60 call [61,66];61 attribute [62,65];62 subscript [63,64];63 identifier [] out;64 string [] stdout;65 identifier [] split;66 argument_list [67];67 attribute [68,69];68 identifier [] os;69 identifier [] linesep;70 if_clause [71];71 call [72,75];72 attribute [73,74];73 identifier [] elm;74 identifier [] strip;75 argument_list [];76 block [77,86,96];77 if_statement [78,84];78 comparison_operator [79,83] <;79 call [80,81];80 identifier [] len;81 argument_list [82];82 identifier [] data;83 integer [] 2;84 block [85];85 continue_statement [];86 expression_statement [87];87 assignment [88,91];88 pattern_list [89,90];89 identifier [] name;90 identifier [] login;91 subscript [92,93];92 identifier [] data;93 slice [94,95];94 colon [];95 integer [] 2;96 if_statement [97,100];97 comparison_operator [98,99] not in;98 identifier [] name;99 identifier [] locals;100 block [101];101 expression_statement [102];102 assignment [103,106];103 subscript [104,105];104 identifier [] users;105 identifier [] name;106 dictionary [107,110];107 pair [108,109];108 string [] login;109 identifier [] login;110 pair [111,112];111 string [] status;112 call [113,116];113 attribute [114,115];114 identifier [] status;115 identifier [] get;116 argument_list [117,118];117 identifier [] login;118 string [] N/A;119 return_statement [120];120 identifier [] users
Return all known accounts, excluding local accounts.
0 module [1];1 function_definition [2,3,5];2 function_name [] reset;3 parameters [4];4 identifier [] self;5 block [6,35];6 if_statement [7,14];7 comparison_operator [8,11] >;8 attribute [9,10];9 identifier [] self;10 identifier [] __row_number;11 attribute [12,13];12 identifier [] self;13 identifier [] __sample_size;14 block [15,23,29];15 expression_statement [16];16 call [17,22];17 attribute [18,21];18 attribute [19,20];19 identifier [] self;20 identifier [] __parser;21 identifier [] reset;22 argument_list [];23 expression_statement [24];24 call [25,28];25 attribute [26,27];26 identifier [] self;27 identifier [] __extract_sample;28 argument_list [];29 expression_statement [30];30 call [31,34];31 attribute [32,33];32 identifier [] self;33 identifier [] __extract_headers;34 argument_list [];35 expression_statement [36];36 assignment [37,40];37 attribute [38,39];38 identifier [] self;39 identifier [] __row_number;40 integer [] 0
Resets the stream pointer to the beginning of the file.
0 module [1];1 function_definition [2,3,7];2 function_name [] from_info;3 parameters [4,5,6];4 identifier [] cls;5 identifier [] container;6 identifier [] info_obj;7 block [8,22];8 expression_statement [9];9 assignment [10,11];10 identifier [] create_fn;11 conditional_expression [12,15,18,19] if;12 attribute [13,14];13 identifier [] cls;14 identifier [] from_subdir;15 comparison_operator [16,17] in;16 string [] subdir;17 identifier [] info_obj;18 line_continuation [] \;19 attribute [20,21];20 identifier [] cls;21 identifier [] from_file_info;22 return_statement [23];23 call [24,25];24 identifier [] create_fn;25 argument_list [26,27];26 identifier [] container;27 identifier [] info_obj
Create from subdirectory or file info object.
0 module [1];1 function_definition [2,3,7];2 function_name [] remove;3 parameters [4,5,6];4 identifier [] self;5 identifier [] order;6 identifier [] cells;7 block [8,14,23];8 expression_statement [9];9 assignment [10,13];10 attribute [11,12];11 identifier [] self;12 identifier [] _normalized;13 False [];14 expression_statement [15];15 assignment [16,17];16 identifier [] order;17 call [18,21];18 attribute [19,20];19 identifier [] self;20 identifier [] _validate_order;21 argument_list [22];22 identifier [] order;23 for_statement [24,25,26];24 identifier [] cell;25 identifier [] cells;26 block [27,37];27 expression_statement [28];28 assignment [29,30];29 identifier [] cell;30 call [31,34];31 attribute [32,33];32 identifier [] self;33 identifier [] _validate_cell;34 argument_list [35,36];35 identifier [] order;36 identifier [] cell;37 expression_statement [38];38 call [39,42];39 attribute [40,41];40 identifier [] self;41 identifier [] _compare_operation;42 argument_list [43,44,45,46];43 identifier [] order;44 identifier [] cell;45 True [];46 string [] remove
Remove cells at a given order from the MOC.
0 module [1];1 function_definition [2,3,5];2 function_name [] stop;3 parameters [4];4 identifier [] self;5 block [6,13];6 expression_statement [7];7 yield [8];8 call [9,12];9 attribute [10,11];10 identifier [] self;11 identifier [] _stop_ubridge;12 argument_list [];13 with_statement [14,21];14 with_clause [15];15 with_item [16];16 () [17];17 yield [18];18 attribute [19,20];19 identifier [] self;20 identifier [] _execute_lock;21 block [22,28,169,175,181];22 expression_statement [23];23 assignment [24,27];24 attribute [25,26];25 identifier [] self;26 identifier [] _hw_virtualization;27 False [];28 if_statement [29,34];29 call [30,33];30 attribute [31,32];31 identifier [] self;32 identifier [] is_running;33 argument_list [];34 block [35,54];35 expression_statement [36];36 call [37,40];37 attribute [38,39];38 identifier [] log;39 identifier [] info;40 argument_list [41];41 call [42,45];42 attribute [43,44];43 string [] Stopping QEMU VM "{}" PID={};44 identifier [] format;45 argument_list [46,49];46 attribute [47,48];47 identifier [] self;48 identifier [] _name;49 attribute [50,53];50 attribute [51,52];51 identifier [] self;52 identifier [] _process;53 identifier [] pid;54 try_statement [55,113,117];55 block [56];56 if_statement [57,60,86];57 attribute [58,59];58 identifier [] self;59 identifier [] acpi_shutdown;60 block [61,69];61 expression_statement [62];62 yield [63];63 call [64,67];64 attribute [65,66];65 identifier [] self;66 identifier [] _control_vm;67 argument_list [68];68 string [] system_powerdown;69 expression_statement [70];70 yield [71];71 call [72,79];72 attribute [73,78];73 attribute [74,77];74 attribute [75,76];75 identifier [] gns3server;76 identifier [] utils;77 identifier [] asyncio;78 identifier [] wait_for_process_termination;79 argument_list [80,83];80 attribute [81,82];81 identifier [] self;82 identifier [] _process;83 keyword_argument [84,85];84 identifier [] timeout;85 integer [] 30;86 else_clause [87];87 block [88,96];88 expression_statement [89];89 call [90,95];90 attribute [91,94];91 attribute [92,93];92 identifier [] self;93 identifier [] _process;94 identifier [] terminate;95 argument_list [];96 expression_statement [97];97 yield [98];98 call [99,106];99 attribute [100,105];100 attribute [101,104];101 attribute [102,103];102 identifier [] gns3server;103 identifier [] utils;104 identifier [] asyncio;105 identifier [] wait_for_process_termination;106 argument_list [107,110];107 attribute [108,109];108 identifier [] self;109 identifier [] _process;110 keyword_argument [111,112];111 identifier [] timeout;112 integer [] 3;113 except_clause [114,115];114 identifier [] ProcessLookupError;115 block [116];116 pass_statement [];117 except_clause [118,121];118 attribute [119,120];119 identifier [] asyncio;120 identifier [] TimeoutError;121 block [122];122 if_statement [123,126];123 attribute [124,125];124 identifier [] self;125 identifier [] _process;126 block [127,141];127 try_statement [128,137];128 block [129];129 expression_statement [130];130 call [131,136];131 attribute [132,135];132 attribute [133,134];133 identifier [] self;134 identifier [] _process;135 identifier [] kill;136 argument_list [];137 except_clause [138,139];138 identifier [] ProcessLookupError;139 block [140];140 pass_statement [];141 if_statement [142,149];142 comparison_operator [143,148] is;143 attribute [144,147];144 attribute [145,146];145 identifier [] self;146 identifier [] _process;147 identifier [] returncode;148 None [];149 block [150];150 expression_statement [151];151 call [152,155];152 attribute [153,154];153 identifier [] log;154 identifier [] warn;155 argument_list [156];156 call [157,160];157 attribute [158,159];158 string [] QEMU VM "{}" PID={} is still running;159 identifier [] format;160 argument_list [161,164];161 attribute [162,163];162 identifier [] self;163 identifier [] _name;164 attribute [165,168];165 attribute [166,167];166 identifier [] self;167 identifier [] _process;168 identifier [] pid;169 expression_statement [170];170 assignment [171,174];171 attribute [172,173];172 identifier [] self;173 identifier [] _process;174 None [];175 expression_statement [176];176 call [177,180];177 attribute [178,179];178 identifier [] self;179 identifier [] _stop_cpulimit;180 argument_list [];181 expression_statement [182];182 yield [183];183 call [184,189];184 attribute [185,188];185 call [186,187];186 identifier [] super;187 argument_list [];188 identifier [] stop;189 argument_list []
Stops this QEMU VM.
0 module [1];1 function_definition [2,3,4];2 function_name [] purge;3 parameters [];4 block [5,10,22,39,51,68,80,97,109,126,138,155,167];5 expression_statement [6];6 call [7,8];7 identifier [] print;8 argument_list [9];9 string [] Purging the Blended files!;10 expression_statement [11];11 assignment [12,13];12 identifier [] templ_dir;13 call [14,19];14 attribute [15,18];15 attribute [16,17];16 identifier [] os;17 identifier [] path;18 identifier [] join;19 argument_list [20,21];20 identifier [] cwd;21 string [] templates;22 if_statement [23,31];23 call [24,29];24 attribute [25,28];25 attribute [26,27];26 identifier [] os;27 identifier [] path;28 identifier [] exists;29 argument_list [30];30 identifier [] templ_dir;31 block [32];32 expression_statement [33];33 call [34,37];34 attribute [35,36];35 identifier [] shutil;36 identifier [] rmtree;37 argument_list [38];38 identifier [] templ_dir;39 expression_statement [40];40 assignment [41,42];41 identifier [] cont_dir;42 call [43,48];43 attribute [44,47];44 attribute [45,46];45 identifier [] os;46 identifier [] path;47 identifier [] join;48 argument_list [49,50];49 identifier [] cwd;50 string [] content;51 if_statement [52,60];52 call [53,58];53 attribute [54,57];54 attribute [55,56];55 identifier [] os;56 identifier [] path;57 identifier [] exists;58 argument_list [59];59 identifier [] cont_dir;60 block [61];61 expression_statement [62];62 call [63,66];63 attribute [64,65];64 identifier [] shutil;65 identifier [] rmtree;66 argument_list [67];67 identifier [] cont_dir;68 expression_statement [69];69 assignment [70,71];70 identifier [] build_dir;71 call [72,77];72 attribute [73,76];73 attribute [74,75];74 identifier [] os;75 identifier [] path;76 identifier [] join;77 argument_list [78,79];78 identifier [] cwd;79 string [] build;80 if_statement [81,89];81 call [82,87];82 attribute [83,86];83 attribute [84,85];84 identifier [] os;85 identifier [] path;86 identifier [] exists;87 argument_list [88];88 identifier [] build_dir;89 block [90];90 expression_statement [91];91 call [92,95];92 attribute [93,94];93 identifier [] shutil;94 identifier [] rmtree;95 argument_list [96];96 identifier [] build_dir;97 expression_statement [98];98 assignment [99,100];99 identifier [] config_file_dir;100 call [101,106];101 attribute [102,105];102 attribute [103,104];103 identifier [] os;104 identifier [] path;105 identifier [] join;106 argument_list [107,108];107 identifier [] cwd;108 string [] config.py;109 if_statement [110,118];110 call [111,116];111 attribute [112,115];112 attribute [113,114];113 identifier [] os;114 identifier [] path;115 identifier [] exists;116 argument_list [117];117 identifier [] config_file_dir;118 block [119];119 expression_statement [120];120 call [121,124];121 attribute [122,123];122 identifier [] os;123 identifier [] remove;124 argument_list [125];125 identifier [] config_file_dir;126 expression_statement [127];127 assignment [128,129];128 identifier [] config2_file_dir;129 call [130,135];130 attribute [131,134];131 attribute [132,133];132 identifier [] os;133 identifier [] path;134 identifier [] join;135 argument_list [136,137];136 identifier [] cwd;137 string [] config.pyc;138 if_statement [139,147];139 call [140,145];140 attribute [141,144];141 attribute [142,143];142 identifier [] os;143 identifier [] path;144 identifier [] exists;145 argument_list [146];146 identifier [] config2_file_dir;147 block [148];148 expression_statement [149];149 call [150,153];150 attribute [151,152];151 identifier [] os;152 identifier [] remove;153 argument_list [154];154 identifier [] config2_file_dir;155 expression_statement [156];156 assignment [157,158];157 identifier [] config3_file_dir;158 call [159,164];159 attribute [160,163];160 attribute [161,162];161 identifier [] os;162 identifier [] path;163 identifier [] join;164 argument_list [165,166];165 identifier [] cwd;166 string [] config.py.oldbak;167 if_statement [168,176];168 call [169,174];169 attribute [170,173];170 attribute [171,172];171 identifier [] os;172 identifier [] path;173 identifier [] exists;174 argument_list [175];175 identifier [] config3_file_dir;176 block [177];177 expression_statement [178];178 call [179,182];179 attribute [180,181];180 identifier [] os;181 identifier [] remove;182 argument_list [183];183 identifier [] config3_file_dir
Removes all files generated by Blended
0 module [1];1 function_definition [2,3,5];2 function_name [] to_json;3 parameters [4];4 identifier [] self;5 block [6];6 return_statement [7];7 dictionary [8,13,18,23,28];8 pair [9,10];9 string [] hum_type;10 attribute [11,12];11 identifier [] self;12 identifier [] hum_type;13 pair [14,15];14 string [] hum_value;15 attribute [16,17];16 identifier [] self;17 identifier [] hum_value;18 pair [19,20];19 string [] barometric_pressure;20 attribute [21,22];21 identifier [] self;22 identifier [] barometric_pressure;23 pair [24,25];24 string [] schedule;25 attribute [26,27];26 identifier [] self;27 identifier [] schedule;28 pair [29,30];29 string [] wet_bulb_range;30 attribute [31,32];31 identifier [] self;32 identifier [] wet_bulb_range
Convert the Humidity Condition to a dictionary.
0 module [1];1 function_definition [2,3,5];2 function_name [] reset;3 parameters [4];4 identifier [] self;5 block [6,23];6 expression_statement [7];7 call [8,13];8 attribute [9,12];9 attribute [10,11];10 identifier [] self;11 identifier [] stack;12 identifier [] append;13 argument_list [14];14 call [15,16];15 identifier [] Frame;16 argument_list [17,20];17 keyword_argument [18,19];18 identifier [] src;19 None [];20 keyword_argument [21,22];21 identifier [] src_path;22 None [];23 return_statement [24];24 call [25,26];25 identifier [] Close;26 argument_list [27];27 call [28,31];28 attribute [29,30];29 identifier [] functools;30 identifier [] partial;31 argument_list [32];32 attribute [33,34];33 identifier [] self;34 identifier [] restore
Used if you need to recursively parse forms.
0 module [1];1 function_definition [2,3,6];2 function_name [] disambiguate_fname;3 parameters [4,5];4 identifier [] files_path_list;5 identifier [] filename;6 block [7,18,26,163];7 expression_statement [8];8 assignment [9,10];9 identifier [] fname;10 call [11,16];11 attribute [12,15];12 attribute [13,14];13 identifier [] os;14 identifier [] path;15 identifier [] basename;16 argument_list [17];17 identifier [] filename;18 expression_statement [19];19 assignment [20,21];20 identifier [] same_name_files;21 call [22,23];22 identifier [] get_same_name_files;23 argument_list [24,25];24 identifier [] files_path_list;25 identifier [] fname;26 if_statement [27,33];27 comparison_operator [28,32] >;28 call [29,30];29 identifier [] len;30 argument_list [31];31 identifier [] same_name_files;32 integer [] 1;33 block [34,41,63,77,84,91,155];34 expression_statement [35];35 assignment [36,37];36 identifier [] compare_path;37 call [38,39];38 identifier [] shortest_path;39 argument_list [40];40 identifier [] same_name_files;41 if_statement [42,45];42 comparison_operator [43,44] ==;43 identifier [] compare_path;44 identifier [] filename;45 block [46,56];46 expression_statement [47];47 call [48,51];48 attribute [49,50];49 identifier [] same_name_files;50 identifier [] remove;51 argument_list [52];52 call [53,54];53 identifier [] path_components;54 argument_list [55];55 identifier [] filename;56 expression_statement [57];57 assignment [58,59];58 identifier [] compare_path;59 call [60,61];60 identifier [] shortest_path;61 argument_list [62];62 identifier [] same_name_files;63 expression_statement [64];64 assignment [65,66];65 identifier [] diff_path;66 call [67,68];67 identifier [] differentiate_prefix;68 argument_list [69,73];69 call [70,71];70 identifier [] path_components;71 argument_list [72];72 identifier [] filename;73 call [74,75];74 identifier [] path_components;75 argument_list [76];76 identifier [] compare_path;77 expression_statement [78];78 assignment [79,80];79 identifier [] diff_path_length;80 call [81,82];81 identifier [] len;82 argument_list [83];83 identifier [] diff_path;84 expression_statement [85];85 assignment [86,87];86 identifier [] path_component;87 call [88,89];88 identifier [] path_components;89 argument_list [90];90 identifier [] diff_path;91 if_statement [92,103];92 () [93];93 boolean_operator [94,97] and;94 comparison_operator [95,96] >;95 identifier [] diff_path_length;96 integer [] 20;97 comparison_operator [98,102] >;98 call [99,100];99 identifier [] len;100 argument_list [101];101 identifier [] path_component;102 integer [] 2;103 block [104,143];104 if_statement [105,116,129];105 boolean_operator [106,111] and;106 comparison_operator [107,110] !=;107 subscript [108,109];108 identifier [] path_component;109 integer [] 0;110 string [] /;111 comparison_operator [112,115] !=;112 subscript [113,114];113 identifier [] path_component;114 integer [] 0;115 string [];116 block [117];117 expression_statement [118];118 assignment [119,120];119 identifier [] path_component;120 list [121,124,125] [path_component[0], '...', \r\n path_component[-1]];121 subscript [122,123];122 identifier [] path_component;123 integer [] 0;124 string [] ...;125 subscript [126,127];126 identifier [] path_component;127 unary_operator [128] -;128 integer [] 1;129 else_clause [130];130 block [131];131 expression_statement [132];132 assignment [133,134];133 identifier [] path_component;134 list [135,138,139] [path_component[2], '...', \r\n path_component[-1]];135 subscript [136,137];136 identifier [] path_component;137 integer [] 2;138 string [] ...;139 subscript [140,141];140 identifier [] path_component;141 unary_operator [142] -;142 integer [] 1;143 expression_statement [144];144 assignment [145,146];145 identifier [] diff_path;146 call [147,152];147 attribute [148,151];148 attribute [149,150];149 identifier [] os;150 identifier [] path;151 identifier [] join;152 argument_list [153];153 list_splat [154];154 identifier [] path_component;155 expression_statement [156];156 assignment [157,158];157 identifier [] fname;158 binary_operator [159,162] +;159 binary_operator [160,161] +;160 identifier [] fname;161 string [] -;162 identifier [] diff_path;163 return_statement [164];164 identifier [] fname
Get tab title without ambiguation.
0 module [1];1 function_definition [2,3,5];2 function_name [] close;3 parameters [4];4 identifier [] self;5 block [6];6 if_statement [7,10];7 attribute [8,9];8 identifier [] self;9 identifier [] is_open;10 block [11,17,25,36,46,55];11 expression_statement [12];12 assignment [13,14];13 identifier [] message_input;14 call [15,16];15 identifier [] UnityMessage;16 argument_list [];17 expression_statement [18];18 assignment [19,24];19 attribute [20,23];20 attribute [21,22];21 identifier [] message_input;22 identifier [] header;23 identifier [] status;24 integer [] 400;25 expression_statement [26];26 call [27,34];27 attribute [28,33];28 attribute [29,32];29 attribute [30,31];30 identifier [] self;31 identifier [] unity_to_external;32 identifier [] parent_conn;33 identifier [] send;34 argument_list [35];35 identifier [] message_input;36 expression_statement [37];37 call [38,45];38 attribute [39,44];39 attribute [40,43];40 attribute [41,42];41 identifier [] self;42 identifier [] unity_to_external;43 identifier [] parent_conn;44 identifier [] close;45 argument_list [];46 expression_statement [47];47 call [48,53];48 attribute [49,52];49 attribute [50,51];50 identifier [] self;51 identifier [] server;52 identifier [] stop;53 argument_list [54];54 False [];55 expression_statement [56];56 assignment [57,60];57 attribute [58,59];58 identifier [] self;59 identifier [] is_open;60 False []
Sends a shutdown signal to the unity environment, and closes the grpc connection.
0 module [1];1 function_definition [2,3,10];2 function_name [] move;3 parameters [4,5,6,7];4 identifier [] self;5 identifier [] path;6 identifier [] dest;7 default_parameter [8,9];8 identifier [] raise_if_exists;9 False [];10 block [11,29,42];11 if_statement [12,21];12 boolean_operator [13,14] and;13 identifier [] raise_if_exists;14 comparison_operator [15,16] in;15 identifier [] dest;16 call [17,20];17 attribute [18,19];18 identifier [] self;19 identifier [] get_all_data;20 argument_list [];21 block [22];22 raise_statement [23];23 call [24,25];24 identifier [] RuntimeError;25 argument_list [26];26 binary_operator [27,28] %;27 string [] Destination exists: %s;28 identifier [] path;29 expression_statement [30];30 assignment [31,32];31 identifier [] contents;32 call [33,40];33 attribute [34,39];34 call [35,38];35 attribute [36,37];36 identifier [] self;37 identifier [] get_all_data;38 argument_list [];39 identifier [] pop;40 argument_list [41];41 identifier [] path;42 expression_statement [43];43 assignment [44,51];44 subscript [45,50];45 call [46,49];46 attribute [47,48];47 identifier [] self;48 identifier [] get_all_data;49 argument_list [];50 identifier [] dest;51 identifier [] contents
Moves a single file from path to dest
0 module [1];1 function_definition [2,3,13];2 function_name [] histogram2d;3 parameters [4,5,6,9,11];4 identifier [] data1;5 identifier [] data2;6 default_parameter [7,8];7 identifier [] bins;8 None [];9 list_splat_pattern [10];10 identifier [] args;11 dictionary_splat_pattern [12];12 identifier [] kwargs;13 block [14,17,47,75,103,119,125];14 import_statement [15];15 dotted_name [16];16 identifier [] dask;17 if_statement [18,21];18 comparison_operator [19,20] not in;19 string [] axis_names;20 identifier [] kwargs;21 block [22];22 if_statement [23,34];23 boolean_operator [24,29] and;24 call [25,26];25 identifier [] hasattr;26 argument_list [27,28];27 identifier [] data1;28 string [] name;29 call [30,31];30 identifier [] hasattr;31 argument_list [32,33];32 identifier [] data2;33 string [] name;34 block [35];35 expression_statement [36];36 assignment [37,40];37 subscript [38,39];38 identifier [] kwargs;39 string [] axis_names;40 list [41,44] [data1.name, data2.name];41 attribute [42,43];42 identifier [] data1;43 identifier [] name;44 attribute [45,46];45 identifier [] data2;46 identifier [] name;47 if_statement [48,54];48 not_operator [49];49 call [50,51];50 identifier [] hasattr;51 argument_list [52,53];52 identifier [] data1;53 string [] dask;54 block [55];55 expression_statement [56];56 assignment [57,58];57 identifier [] data1;58 call [59,64];59 attribute [60,63];60 attribute [61,62];61 identifier [] dask;62 identifier [] array;63 identifier [] from_array;64 argument_list [65,66];65 identifier [] data1;66 keyword_argument [67,68];67 identifier [] chunks;68 binary_operator [69,74] /;69 call [70,73];70 attribute [71,72];71 identifier [] data1;72 identifier [] size;73 argument_list [];74 integer [] 100;75 if_statement [76,82];76 not_operator [77];77 call [78,79];78 identifier [] hasattr;79 argument_list [80,81];80 identifier [] data2;81 string [] dask;82 block [83];83 expression_statement [84];84 assignment [85,86];85 identifier [] data2;86 call [87,92];87 attribute [88,91];88 attribute [89,90];89 identifier [] dask;90 identifier [] array;91 identifier [] from_array;92 argument_list [93,94];93 identifier [] data2;94 keyword_argument [95,96];95 identifier [] chunks;96 binary_operator [97,102] /;97 call [98,101];98 attribute [99,100];99 identifier [] data2;100 identifier [] size;101 argument_list [];102 integer [] 100;103 expression_statement [104];104 assignment [105,106];105 identifier [] data;106 call [107,112];107 attribute [108,111];108 attribute [109,110];109 identifier [] dask;110 identifier [] array;111 identifier [] stack;112 argument_list [113,116];113 list [114,115] [data1, data2];114 identifier [] data1;115 identifier [] data2;116 keyword_argument [117,118];117 identifier [] axis;118 integer [] 1;119 expression_statement [120];120 assignment [121,124];121 subscript [122,123];122 identifier [] kwargs;123 string [] dim;124 integer [] 2;125 return_statement [126];126 call [127,128];127 identifier [] histogramdd;128 argument_list [129,130,131,133];129 identifier [] data;130 identifier [] bins;131 list_splat [132];132 identifier [] args;133 dictionary_splat [134];134 identifier [] kwargs
Facade function to create 2D histogram using dask.
0 module [1];1 function_definition [2,3,5];2 function_name [] session_context;3 parameters [4];4 identifier [] fn;5 block [6,53];6 decorated_definition [7,14];7 decorator [8];8 call [9,12];9 attribute [10,11];10 identifier [] functools;11 identifier [] wraps;12 argument_list [13];13 identifier [] fn;14 function_definition [15,16,21];15 function_name [] wrap;16 parameters [17,19];17 list_splat_pattern [18];18 identifier [] args;19 dictionary_splat_pattern [20];20 identifier [] kwargs;21 block [22,32,45,51];22 expression_statement [23];23 assignment [24,25];24 identifier [] session;25 call [26,31];26 attribute [27,30];27 subscript [28,29];28 identifier [] args;29 integer [] 0;30 identifier [] Session;31 argument_list [];32 expression_statement [33];33 assignment [34,35];34 identifier [] result;35 call [36,37];36 identifier [] fn;37 argument_list [38,40,43];38 list_splat [39];39 identifier [] args;40 keyword_argument [41,42];41 identifier [] session;42 identifier [] session;43 dictionary_splat [44];44 identifier [] kwargs;45 expression_statement [46];46 call [47,50];47 attribute [48,49];48 identifier [] session;49 identifier [] close;50 argument_list [];51 return_statement [52];52 identifier [] result;53 return_statement [54];54 identifier [] wrap
Handles session setup and teardown
0 module [1];1 function_definition [2,3,7];2 function_name [] _subset_by_support;3 parameters [4,5,6];4 identifier [] orig_vcf;5 identifier [] cmp_calls;6 identifier [] data;7 block [8,18,31,87];8 expression_statement [9];9 assignment [10,11];10 identifier [] cmp_vcfs;11 list_comprehension [12,15];12 subscript [13,14];13 identifier [] x;14 string [] vrn_file;15 for_in_clause [16,17];16 identifier [] x;17 identifier [] cmp_calls;18 expression_statement [19];19 assignment [20,21];20 identifier [] out_file;21 binary_operator [22,23] %;22 string [] %s-inensemble.vcf.gz;23 subscript [24,30];24 call [25,28];25 attribute [26,27];26 identifier [] utils;27 identifier [] splitext_plus;28 argument_list [29];29 identifier [] orig_vcf;30 integer [] 0;31 if_statement [32,40];32 not_operator [33];33 call [34,37];34 attribute [35,36];35 identifier [] utils;36 identifier [] file_uptodate;37 argument_list [38,39];38 identifier [] out_file;39 identifier [] orig_vcf;40 block [41];41 with_statement [42,52];42 with_clause [43];43 with_item [44];44 as_pattern [45,50];45 call [46,47];46 identifier [] file_transaction;47 argument_list [48,49];48 identifier [] data;49 identifier [] out_file;50 as_pattern_target [51];51 identifier [] tx_out_file;52 block [53,57,67,71];53 expression_statement [54];54 assignment [55,56];55 identifier [] cmd;56 string [] bedtools intersect -header -wa -f 0.5 -r -a {orig_vcf} -b;57 for_statement [58,59,60];58 identifier [] cmp_vcf;59 identifier [] cmp_vcfs;60 block [61];61 expression_statement [62];62 augmented_assignment [63,64] +=;63 identifier [] cmd;64 binary_operator [65,66] %;65 string [] <(bcftools view -f 'PASS,.' %s);66 identifier [] cmp_vcf;67 expression_statement [68];68 augmented_assignment [69,70] +=;69 identifier [] cmd;70 string [] | bgzip -c > {tx_out_file};71 expression_statement [72];72 call [73,76];73 attribute [74,75];74 identifier [] do;75 identifier [] run;76 argument_list [77,86];77 call [78,81];78 attribute [79,80];79 identifier [] cmd;80 identifier [] format;81 argument_list [82];82 dictionary_splat [83];83 call [84,85];84 identifier [] locals;85 argument_list [];86 string [] Subset calls by those present in Ensemble output;87 return_statement [88];88 call [89,92];89 attribute [90,91];90 identifier [] vcfutils;91 identifier [] bgzip_and_index;92 argument_list [93,94];93 identifier [] out_file;94 subscript [95,96];95 identifier [] data;96 string [] config
Subset orig_vcf to calls also present in any of the comparison callers.
0 module [1];1 function_definition [2,3,16];2 function_name [] persistant_error;3 parameters [4,5,6,9,12,14];4 identifier [] request;5 identifier [] message;6 default_parameter [7,8];7 identifier [] extra_tags;8 string [];9 default_parameter [10,11];10 identifier [] fail_silently;11 False [];12 list_splat_pattern [13];13 identifier [] args;14 dictionary_splat_pattern [15];15 identifier [] kwargs;16 block [17];17 expression_statement [18];18 call [19,20];19 identifier [] add_message;20 argument_list [21,22,23,24,27,30,32];21 identifier [] request;22 identifier [] ERROR_PERSISTENT;23 identifier [] message;24 keyword_argument [25,26];25 identifier [] extra_tags;26 identifier [] extra_tags;27 keyword_argument [28,29];28 identifier [] fail_silently;29 identifier [] fail_silently;30 list_splat [31];31 identifier [] args;32 dictionary_splat [33];33 identifier [] kwargs
Adds a persistant message with the ``ERROR`` level.
0 module [1];1 function_definition [2,3,5];2 function_name [] corethreads;3 parameters [4];4 identifier [] self;5 block [6,14,50,94,102];6 expression_statement [7];7 call [8,9];8 identifier [] printtime;9 argument_list [10,11];10 string [] Creating CDS files and finding core genes;11 attribute [12,13];12 identifier [] self;13 identifier [] start;14 for_statement [15,16,22];15 identifier [] i;16 call [17,18];17 identifier [] range;18 argument_list [19];19 attribute [20,21];20 identifier [] self;21 identifier [] cpus;22 block [23,37,44];23 expression_statement [24];24 assignment [25,26];25 identifier [] threads;26 call [27,28];27 identifier [] Thread;28 argument_list [29,34];29 keyword_argument [30,31];30 identifier [] target;31 attribute [32,33];32 identifier [] self;33 identifier [] coregroups;34 keyword_argument [35,36];35 identifier [] args;36 tuple [];37 expression_statement [38];38 call [39,42];39 attribute [40,41];40 identifier [] threads;41 identifier [] setDaemon;42 argument_list [43];43 True [];44 expression_statement [45];45 call [46,49];46 attribute [47,48];47 identifier [] threads;48 identifier [] start;49 argument_list [];50 for_statement [51,52,57];51 identifier [] sample;52 attribute [53,56];53 attribute [54,55];54 identifier [] self;55 identifier [] runmetadata;56 identifier [] samples;57 block [58,85];58 expression_statement [59];59 assignment [60,65];60 attribute [61,64];61 attribute [62,63];62 identifier [] sample;63 identifier [] prokka;64 identifier [] cds;65 call [66,71];66 attribute [67,70];67 attribute [68,69];68 identifier [] os;69 identifier [] path;70 identifier [] join;71 argument_list [72,77];72 attribute [73,76];73 attribute [74,75];74 identifier [] sample;75 identifier [] prokka;76 identifier [] outputdir;77 call [78,81];78 attribute [79,80];79 string [] {}.cds;80 identifier [] format;81 argument_list [82];82 attribute [83,84];83 identifier [] sample;84 identifier [] name;85 expression_statement [86];86 call [87,92];87 attribute [88,91];88 attribute [89,90];89 identifier [] self;90 identifier [] corequeue;91 identifier [] put;92 argument_list [93];93 identifier [] sample;94 expression_statement [95];95 call [96,101];96 attribute [97,100];97 attribute [98,99];98 identifier [] self;99 identifier [] corequeue;100 identifier [] join;101 argument_list [];102 expression_statement [103];103 call [104,107];104 attribute [105,106];105 identifier [] self;106 identifier [] corewriter;107 argument_list []
Create a .cds file consisting of fasta records of CDS features for each strain
0 module [1];1 function_definition [2,3,6];2 function_name [] from_bytes;3 parameters [4,5];4 identifier [] cls;5 identifier [] data;6 block [7,24,30,44,50,67,71,77,91];7 expression_statement [8];8 assignment [9,10];9 identifier [] len_username;10 call [11,14];11 attribute [12,13];12 identifier [] int;13 identifier [] from_bytes;14 argument_list [15,21];15 subscript [16,17];16 identifier [] data;17 slice [18,19,20];18 integer [] 0;19 colon [];20 integer [] 2;21 keyword_argument [22,23];22 identifier [] byteorder;23 string [] big;24 expression_statement [25];25 assignment [26,27];26 identifier [] offset_username;27 binary_operator [28,29] +;28 integer [] 2;29 identifier [] len_username;30 expression_statement [31];31 assignment [32,33];32 identifier [] username;33 call [34,42];34 attribute [35,41];35 subscript [36,37];36 identifier [] data;37 slice [38,39,40];38 integer [] 2;39 colon [];40 identifier [] offset_username;41 identifier [] decode;42 argument_list [43];43 string [] UTF-8;44 expression_statement [45];45 assignment [46,47];46 identifier [] offset_password;47 binary_operator [48,49] +;48 integer [] 2;49 identifier [] offset_username;50 expression_statement [51];51 assignment [52,53];52 identifier [] len_password;53 call [54,57];54 attribute [55,56];55 identifier [] int;56 identifier [] from_bytes;57 argument_list [58,64];58 subscript [59,60];59 identifier [] data;60 slice [61,62,63];61 identifier [] offset_username;62 colon [];63 identifier [] offset_password;64 keyword_argument [65,66];65 identifier [] byteorder;66 string [] big;67 expression_statement [68];68 assignment [69,70];69 identifier [] pass_begin;70 identifier [] offset_password;71 expression_statement [72];72 assignment [73,74];73 identifier [] pass_end;74 binary_operator [75,76] +;75 identifier [] offset_password;76 identifier [] len_password;77 expression_statement [78];78 assignment [79,80];79 identifier [] password;80 call [81,89];81 attribute [82,88];82 subscript [83,84];83 identifier [] data;84 slice [85,86,87];85 identifier [] pass_begin;86 colon [];87 identifier [] pass_end;88 identifier [] decode;89 argument_list [90];90 string [] UTF-8;91 return_statement [92];92 call [93,94];93 identifier [] cls;94 argument_list [95,96];95 identifier [] username;96 identifier [] password
I am so sorry.
0 module [1];1 function_definition [2,3,4];2 function_name [] list_clients;3 parameters [];4 block [5,21];5 expression_statement [6];6 assignment [7,8];7 identifier [] p;8 binary_operator [9,10] %;9 string [] %s/pymux.sock.%s.*;10 tuple [11,16];11 call [12,15];12 attribute [13,14];13 identifier [] tempfile;14 identifier [] gettempdir;15 argument_list [];16 call [17,20];17 attribute [18,19];18 identifier [] getpass;19 identifier [] getuser;20 argument_list [];21 for_statement [22,23,29];22 identifier [] path;23 call [24,27];24 attribute [25,26];25 identifier [] glob;26 identifier [] glob;27 argument_list [28];28 identifier [] p;29 block [30];30 try_statement [31,38];31 block [32];32 expression_statement [33];33 yield [34];34 call [35,36];35 identifier [] PosixClient;36 argument_list [37];37 identifier [] path;38 except_clause [39,42];39 attribute [40,41];40 identifier [] socket;41 identifier [] error;42 block [43];43 pass_statement []
List all the servers that are running.
0 module [1];1 function_definition [2,3,6];2 function_name [] from_list;3 parameters [4,5];4 identifier [] cls;5 identifier [] values;6 block [7,13,24];7 expression_statement [8];8 assignment [9,10];9 identifier [] self;10 call [11,12];11 identifier [] cls;12 argument_list [];13 for_statement [14,15,16];14 identifier [] value;15 identifier [] values;16 block [17];17 expression_statement [18];18 call [19,22];19 attribute [20,21];20 identifier [] self;21 identifier [] add;22 argument_list [23];23 identifier [] value;24 return_statement [25];25 identifier [] self
Construct a tree from a list with paths.
0 module [1];1 function_definition [2,3,6];2 function_name [] demo_supercut;3 parameters [4,5];4 identifier [] composition;5 identifier [] padding;6 block [7];7 for_statement [8,11,15];8 pattern_list [9,10];9 identifier [] i;10 identifier [] c;11 call [12,13];12 identifier [] enumerate;13 argument_list [14];14 identifier [] composition;15 block [16,22,28,34,67];16 expression_statement [17];17 assignment [18,19];18 identifier [] line;19 subscript [20,21];20 identifier [] c;21 string [] line;22 expression_statement [23];23 assignment [24,25];24 identifier [] start;25 subscript [26,27];26 identifier [] c;27 string [] start;28 expression_statement [29];29 assignment [30,31];30 identifier [] end;31 subscript [32,33];32 identifier [] c;33 string [] end;34 if_statement [35,60];35 boolean_operator [36,51] and;36 boolean_operator [37,40] and;37 comparison_operator [38,39] >;38 identifier [] i;39 integer [] 0;40 comparison_operator [41,48] ==;41 subscript [42,47];42 subscript [43,44];43 identifier [] composition;44 binary_operator [45,46] -;45 identifier [] i;46 integer [] 1;47 string [] file;48 subscript [49,50];49 identifier [] c;50 string [] file;51 comparison_operator [52,53] <;52 identifier [] start;53 subscript [54,59];54 subscript [55,56];55 identifier [] composition;56 binary_operator [57,58] -;57 identifier [] i;58 integer [] 1;59 string [] end;60 block [61];61 expression_statement [62];62 assignment [63,64];63 identifier [] start;64 binary_operator [65,66] +;65 identifier [] start;66 identifier [] padding;67 expression_statement [68];68 call [69,70];69 identifier [] print;70 argument_list [71];71 call [72,75];72 attribute [73,74];73 string [] {1} to {2}:\t{0};74 identifier [] format;75 argument_list [76,77,78];76 identifier [] line;77 identifier [] start;78 identifier [] end
Print out timespans to be cut followed by the line number in the srt.
0 module [1];1 function_definition [2,3,12];2 function_name [] soundfield;3 parameters [4,8];4 typed_parameter [5,6];5 identifier [] dev;6 type [7];7 identifier [] Device;8 typed_parameter [9,10];9 identifier [] soundfield;10 type [11];11 identifier [] str;12 block [13,27,37];13 if_statement [14,17];14 comparison_operator [15,16] is not;15 identifier [] soundfield;16 None [];17 block [18];18 expression_statement [19];19 await [20];20 call [21,24];21 attribute [22,23];22 identifier [] dev;23 identifier [] set_sound_settings;24 argument_list [25,26];25 string [] soundField;26 identifier [] soundfield;27 expression_statement [28];28 assignment [29,30];29 identifier [] soundfields;30 await [31];31 call [32,35];32 attribute [33,34];33 identifier [] dev;34 identifier [] get_sound_settings;35 argument_list [36];36 string [] soundField;37 expression_statement [38];38 call [39,40];39 identifier [] print_settings;40 argument_list [41];41 identifier [] soundfields
Get or set sound field.
0 module [1];1 function_definition [2,3,5];2 function_name [] delete_project;3 parameters [4];4 identifier [] self;5 block [6];6 if_statement [7,10];7 attribute [8,9];8 identifier [] self;9 identifier [] current_active_project;10 block [11,17,25,35,68];11 expression_statement [12];12 call [13,16];13 attribute [14,15];14 identifier [] self;15 identifier [] switch_to_plugin;16 argument_list [];17 expression_statement [18];18 assignment [19,20];19 identifier [] path;20 attribute [21,24];21 attribute [22,23];22 identifier [] self;23 identifier [] current_active_project;24 identifier [] root_path;25 expression_statement [26];26 assignment [27,28];27 identifier [] buttons;28 binary_operator [29,32] |;29 attribute [30,31];30 identifier [] QMessageBox;31 identifier [] Yes;32 attribute [33,34];33 identifier [] QMessageBox;34 identifier [] No;35 expression_statement [36];36 assignment [37,38];37 identifier [] answer;38 call [39,42];39 attribute [40,41];40 identifier [] QMessageBox;41 identifier [] warning;42 argument_list [43,44,48,67];43 identifier [] self;44 call [45,46];45 identifier [] _;46 argument_list [47];47 string [] Delete;48 call [49,58];49 attribute [50,57];50 call [51,52];51 identifier [] _;52 argument_list [53];53 concatenated_string [54,55,56];54 string [] Do you really want to delete <b>{filename}</b>?<br><br>;55 string [] <b>Note:</b> This action will only delete the project.;56 string [] Its files are going to be preserved on disk.;57 identifier [] format;58 argument_list [59];59 keyword_argument [60,61];60 identifier [] filename;61 call [62,65];62 attribute [63,64];63 identifier [] osp;64 identifier [] basename;65 argument_list [66];66 identifier [] path;67 identifier [] buttons;68 if_statement [69,74];69 comparison_operator [70,71] ==;70 identifier [] answer;71 attribute [72,73];72 identifier [] QMessageBox;73 identifier [] Yes;74 block [75];75 try_statement [76,96];76 block [77,83];77 expression_statement [78];78 call [79,82];79 attribute [80,81];80 identifier [] self;81 identifier [] close_project;82 argument_list [];83 expression_statement [84];84 call [85,88];85 attribute [86,87];86 identifier [] shutil;87 identifier [] rmtree;88 argument_list [89];89 call [90,93];90 attribute [91,92];91 identifier [] osp;92 identifier [] join;93 argument_list [94,95];94 identifier [] path;95 string [] .spyproject;96 except_clause [97,101];97 as_pattern [98,99];98 identifier [] EnvironmentError;99 as_pattern_target [100];100 identifier [] error;101 block [102];102 expression_statement [103];103 call [104,107];104 attribute [105,106];105 identifier [] QMessageBox;106 identifier [] critical;107 argument_list [108,109,113];108 identifier [] self;109 call [110,111];110 identifier [] _;111 argument_list [112];112 string [] Project Explorer;113 call [114,122];114 attribute [115,121];115 call [116,117];116 identifier [] _;117 argument_list [118];118 concatenated_string [119,120];119 string [] <b>Unable to delete <i>{varpath}</i></b>;120 string [] <br><br>The error message was:<br>{error};121 identifier [] format;122 argument_list [123,126];123 keyword_argument [124,125];124 identifier [] varpath;125 identifier [] path;126 keyword_argument [127,128];127 identifier [] error;128 call [129,130];129 identifier [] to_text_string;130 argument_list [131];131 identifier [] error
Delete the current project without deleting the files in the directory.
0 module [1];1 function_definition [2,3,5];2 function_name [] _get_cols;3 parameters [4];4 identifier [] row_content;5 block [6,10,14,18,74];6 expression_statement [7];7 assignment [8,9];8 identifier [] cols;9 list [] [];10 expression_statement [11];11 assignment [12,13];12 identifier [] subcell_col;13 list [] [];14 expression_statement [15];15 assignment [16,17];16 identifier [] prev_bar;17 None [];18 for_statement [19,22,23];19 pattern_list [20,21];20 identifier [] _coord;21 identifier [] item;22 identifier [] row_content;23 block [24];24 if_statement [25,30,38];25 call [26,27];26 identifier [] isinstance;27 argument_list [28,29];28 identifier [] item;29 identifier [] LTTextLine;30 block [31];31 expression_statement [32];32 call [33,36];33 attribute [34,35];34 identifier [] subcell_col;35 identifier [] append;36 argument_list [37];37 identifier [] item;38 else_clause [39];39 block [40,66,70];40 if_statement [41,42];41 identifier [] prev_bar;42 block [43,49,57];43 expression_statement [44];44 assignment [45,46];45 identifier [] bar_ranges;46 tuple [47,48];47 identifier [] prev_bar;48 identifier [] item;49 expression_statement [50];50 assignment [51,52];51 identifier [] col_items;52 conditional_expression [53,54,55] if;53 identifier [] subcell_col;54 identifier [] subcell_col;55 list [56] [None];56 None [];57 expression_statement [58];58 call [59,62];59 attribute [60,61];60 identifier [] cols;61 identifier [] extend;62 argument_list [63];63 list [64,65] [bar_ranges, col_items];64 identifier [] bar_ranges;65 identifier [] col_items;66 expression_statement [67];67 assignment [68,69];68 identifier [] prev_bar;69 identifier [] item;70 expression_statement [71];71 assignment [72,73];72 identifier [] subcell_col;73 list [] [];74 return_statement [75];75 identifier [] cols
Counting the number columns based on the content of this row
0 module [1];1 function_definition [2,3,9];2 function_name [] zone_height_min2max;3 parameters [4,5,6];4 identifier [] idf;5 identifier [] zonename;6 default_parameter [7,8];7 identifier [] debug;8 False [];9 block [10,20,32,48,63,76,87,94,101,107];10 expression_statement [11];11 assignment [12,13];12 identifier [] zone;13 call [14,17];14 attribute [15,16];15 identifier [] idf;16 identifier [] getobject;17 argument_list [18,19];18 string [] ZONE;19 identifier [] zonename;20 expression_statement [21];21 assignment [22,23];22 identifier [] surfs;23 subscript [24,27];24 attribute [25,26];25 identifier [] idf;26 identifier [] idfobjects;27 call [28,31];28 attribute [29,30];29 string [] BuildingSurface:Detailed;30 identifier [] upper;31 argument_list [];32 expression_statement [33];33 assignment [34,35];34 identifier [] zone_surfs;35 list_comprehension [36,37,40];36 identifier [] s;37 for_in_clause [38,39];38 identifier [] s;39 identifier [] surfs;40 if_clause [41];41 comparison_operator [42,45] ==;42 attribute [43,44];43 identifier [] s;44 identifier [] Zone_Name;45 attribute [46,47];46 identifier [] zone;47 identifier [] Name;48 expression_statement [49];49 assignment [50,51];50 identifier [] surf_xyzs;51 list_comprehension [52,60];52 call [53,58];53 attribute [54,57];54 attribute [55,56];55 identifier [] eppy;56 identifier [] function_helpers;57 identifier [] getcoords;58 argument_list [59];59 identifier [] s;60 for_in_clause [61,62];61 identifier [] s;62 identifier [] zone_surfs;63 expression_statement [64];64 assignment [65,66];65 identifier [] surf_xyzs;66 call [67,68];67 identifier [] list;68 argument_list [69];69 call [70,73];70 attribute [71,72];71 identifier [] itertools;72 identifier [] chain;73 argument_list [74];74 list_splat [75];75 identifier [] surf_xyzs;76 expression_statement [77];77 assignment [78,79];78 identifier [] surf_zs;79 list_comprehension [80,81];80 identifier [] z;81 for_in_clause [82,86];82 pattern_list [83,84,85];83 identifier [] x;84 identifier [] y;85 identifier [] z;86 identifier [] surf_xyzs;87 expression_statement [88];88 assignment [89,90];89 identifier [] topz;90 call [91,92];91 identifier [] max;92 argument_list [93];93 identifier [] surf_zs;94 expression_statement [95];95 assignment [96,97];96 identifier [] botz;97 call [98,99];98 identifier [] min;99 argument_list [100];100 identifier [] surf_zs;101 expression_statement [102];102 assignment [103,104];103 identifier [] height;104 binary_operator [105,106] -;105 identifier [] topz;106 identifier [] botz;107 return_statement [108];108 identifier [] height
zone height = max-min
0 module [1];1 function_definition [2,3,16];2 function_name [] embeddedFileAdd;3 parameters [4,5,6,7,10,13];4 identifier [] self;5 identifier [] buffer;6 identifier [] name;7 default_parameter [8,9];8 identifier [] filename;9 None [];10 default_parameter [11,12];11 identifier [] ufilename;12 None [];13 default_parameter [14,15];14 identifier [] desc;15 None [];16 block [17,31];17 if_statement [18,25];18 boolean_operator [19,22] or;19 attribute [20,21];20 identifier [] self;21 identifier [] isClosed;22 attribute [23,24];23 identifier [] self;24 identifier [] isEncrypted;25 block [26];26 raise_statement [27];27 call [28,29];28 identifier [] ValueError;29 argument_list [30];30 string [] operation illegal for closed / encrypted doc;31 return_statement [32];32 call [33,36];33 attribute [34,35];34 identifier [] _fitz;35 identifier [] Document_embeddedFileAdd;36 argument_list [37,38,39,40,41,42];37 identifier [] self;38 identifier [] buffer;39 identifier [] name;40 identifier [] filename;41 identifier [] ufilename;42 identifier [] desc
Embed a new file.
0 module [1];1 function_definition [2,3,7];2 function_name [] format_field;3 parameters [4,5,6];4 identifier [] self;5 identifier [] value;6 identifier [] format_spec;7 block [8,31];8 if_statement [9,14];9 call [10,11];10 identifier [] isinstance;11 argument_list [12,13];12 identifier [] value;13 identifier [] MissingField;14 block [15,26];15 if_statement [16,19];16 comparison_operator [17,18] is not;17 identifier [] format_spec;18 None [];19 block [20];20 expression_statement [21];21 assignment [22,25];22 attribute [23,24];23 identifier [] value;24 identifier [] format_spec;25 identifier [] format_spec;26 return_statement [27];27 call [28,29];28 identifier [] str;29 argument_list [30];30 identifier [] value;31 return_statement [32];32 call [33,40];33 attribute [34,39];34 call [35,36];35 identifier [] super;36 argument_list [37,38];37 identifier [] FormatterWrapper;38 identifier [] self;39 identifier [] format_field;40 argument_list [41,42];41 identifier [] value;42 identifier [] format_spec
When field missing, return original spec.
0 module [1];1 function_definition [2,3,5];2 function_name [] _make_spec_file;3 parameters [4];4 identifier [] self;5 block [6,21,28,35,42];6 expression_statement [7];7 assignment [8,9];8 identifier [] spec_file;9 call [10,19];10 attribute [11,18];11 attribute [12,17];12 attribute [13,16];13 attribute [14,15];14 identifier [] setuptools;15 identifier [] command;16 identifier [] bdist_rpm;17 identifier [] bdist_rpm;18 identifier [] _make_spec_file;19 argument_list [20];20 identifier [] self;21 expression_statement [22];22 call [23,26];23 attribute [24,25];24 identifier [] spec_file;25 identifier [] append;26 argument_list [27];27 string [] %config(noreplace) /etc/lograptor/lograptor.conf;28 expression_statement [29];29 call [30,33];30 attribute [31,32];31 identifier [] spec_file;32 identifier [] append;33 argument_list [34];34 string [] %config(noreplace) /etc/lograptor/report_template.*;35 expression_statement [36];36 call [37,40];37 attribute [38,39];38 identifier [] spec_file;39 identifier [] append;40 argument_list [41];41 string [] %config(noreplace) /etc/lograptor/conf.d/*.conf;42 return_statement [43];43 identifier [] spec_file
Customize spec file inserting %config section
0 module [1];1 function_definition [2,3,5];2 function_name [] enclosure_directed;3 parameters [4];4 identifier [] self;5 block [6,19,27];6 expression_statement [7];7 assignment [8,11];8 pattern_list [9,10];9 identifier [] root;10 identifier [] enclosure;11 call [12,15];12 attribute [13,14];13 identifier [] polygons;14 identifier [] enclosure_tree;15 argument_list [16];16 attribute [17,18];17 identifier [] self;18 identifier [] polygons_closed;19 expression_statement [20];20 assignment [21,26];21 subscript [22,25];22 attribute [23,24];23 identifier [] self;24 identifier [] _cache;25 string [] root;26 identifier [] root;27 return_statement [28];28 identifier [] enclosure
Networkx DiGraph of polygon enclosure
0 module [1];1 function_definition [2,3,9];2 function_name [] callRemote;3 parameters [4,5,7];4 identifier [] self;5 list_splat_pattern [6];6 identifier [] a;7 dictionary_splat_pattern [8];8 identifier [] kw;9 block [10,25];10 if_statement [11,15];11 not_operator [12];12 attribute [13,14];13 identifier [] self;14 identifier [] running;15 block [16];16 return_statement [17];17 call [18,21];18 attribute [19,20];19 identifier [] defer;20 identifier [] fail;21 argument_list [22];22 call [23,24];23 identifier [] ServiceStopped;24 argument_list [];25 return_statement [26];26 call [27,32];27 attribute [28,31];28 attribute [29,30];29 identifier [] self;30 identifier [] clientFactory;31 identifier [] callRemote;32 argument_list [33,35];33 list_splat [34];34 identifier [] a;35 dictionary_splat [36];36 identifier [] kw
Make a callRemote request of the JSONRPCClientFactory.
0 module [1];1 function_definition [2,3,31];2 function_name [] pretty_path;3 parameters [4,5];4 identifier [] path;5 default_parameter [6,7];6 identifier [] _home_re;7 call [8,11];8 attribute [9,10];9 identifier [] re;10 identifier [] compile;11 argument_list [12];12 binary_operator [13,14] +;13 string [] ^;14 call [15,18];15 attribute [16,17];16 identifier [] re;17 identifier [] escape;18 argument_list [19];19 binary_operator [20,28] +;20 call [21,26];21 attribute [22,25];22 attribute [23,24];23 identifier [] os;24 identifier [] path;25 identifier [] expanduser;26 argument_list [27];27 string [] ~;28 attribute [29,30];29 identifier [] os;30 identifier [] sep;31 block [32,39,53];32 expression_statement [33];33 assignment [34,35];34 identifier [] path;35 call [36,37];36 identifier [] format_filename;37 argument_list [38];38 identifier [] path;39 expression_statement [40];40 assignment [41,42];41 identifier [] path;42 call [43,46];43 attribute [44,45];44 identifier [] _home_re;45 identifier [] sub;46 argument_list [47,52];47 binary_operator [48,49] +;48 string [] ~;49 attribute [50,51];50 identifier [] os;51 identifier [] sep;52 identifier [] path;53 return_statement [54];54 identifier [] path
Prettify path for humans, and make it Unicode.
0 module [1];1 function_definition [2,3,5];2 function_name [] create;3 parameters [4];4 identifier [] ctx;5 block [6,9,22,34,42,50];6 import_statement [7];7 dotted_name [8];8 identifier [] shutil;9 expression_statement [10];10 assignment [11,14];11 pattern_list [12,13];12 identifier [] this_dir;13 identifier [] this_filename;14 call [15,20];15 attribute [16,19];16 attribute [17,18];17 identifier [] os;18 identifier [] path;19 identifier [] split;20 argument_list [21];21 identifier [] __file__;22 expression_statement [23];23 assignment [24,25];24 identifier [] default_config_file;25 call [26,31];26 attribute [27,30];27 attribute [28,29];28 identifier [] os;29 identifier [] path;30 identifier [] join;31 argument_list [32,33];32 identifier [] this_dir;33 string [] apis/example-config.yaml;34 expression_statement [35];35 assignment [36,37];36 identifier [] config_file;37 subscript [38,41];38 attribute [39,40];39 identifier [] ctx;40 identifier [] obj;41 string [] configfile;42 expression_statement [43];43 call [44,47];44 attribute [45,46];45 identifier [] shutil;46 identifier [] copyfile;47 argument_list [48,49];48 identifier [] default_config_file;49 identifier [] config_file;50 expression_statement [51];51 call [52,53];52 identifier [] print_message;53 argument_list [54];54 call [55,58];55 attribute [56,57];56 string [] Config file created: {};57 identifier [] format;58 argument_list [59];59 identifier [] config_file
Create default config file