sequence stringlengths 388 5.57k | docstring stringlengths 11 171 |
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0 module [1];1 function_definition [2,3,5];2 function_name [] _bits_to_geohash;3 parameters [4];4 identifier [] value;5 block [6,10,69];6 expression_statement [7];7 assignment [8,9];8 identifier [] ret;9 list [] [];10 for_statement [11,12,32];11 identifier [] i;12 generator_expression [13,21];13 subscript [14,15];14 id... | Convert a list of GeoHash bits to a GeoHash. |
0 module [1];1 function_definition [2,3,7];2 function_name [] encrypt;3 parameters [4,5,6];4 identifier [] source;5 identifier [] dest;6 identifier [] keys;7 block [8,33,38];8 expression_statement [9];9 assignment [10,11];10 identifier [] cmd;11 call [12,13];12 identifier [] flatten;13 argument_list [14];14 list [15,18... | Encrypts a file using the given keys |
0 module [1];1 function_definition [2,3,6];2 function_name [] generate;3 parameters [4,5];4 identifier [] self;5 identifier [] api;6 block [7];7 for_statement [8,9,16];8 identifier [] namespace;9 call [10,15];10 attribute [11,14];11 attribute [12,13];12 identifier [] api;13 identifier [] namespaces;14 identifier [] val... | Main code generator entry point. |
0 module [1];1 function_definition [2,3,5];2 function_name [] format;3 parameters [4];4 identifier [] self;5 block [6,12,90];6 expression_statement [7];7 assignment [8,11];8 attribute [9,10];9 identifier [] self;10 identifier [] max_lengths;11 list [] [];12 for_statement [13,14,17];13 identifier [] row;14 attribute [15... | Format table to print out |
0 module [1];1 function_definition [2,3,5];2 function_name [] build_block;3 parameters [4];4 identifier [] self;5 block [6,16,30,41];6 expression_statement [7];7 assignment [8,9];8 identifier [] header_bytes;9 call [10,15];10 attribute [11,14];11 attribute [12,13];12 identifier [] self;13 identifier [] block_header;14 ... | Assembles the candidate block into it's finalized form for broadcast. |
0 module [1];1 function_definition [2,3,5];2 function_name [] download;3 parameters [4];4 identifier [] args;5 block [6,21,33,53,83,92,102,106,126];6 expression_statement [7];7 assignment [8,11];8 pattern_list [9,10];9 identifier [] accessions;10 identifier [] infoFTP;11 expression_list [12,18];12 call [13,14];13 ident... | download genomes from NCBI |
0 module [1];1 function_definition [2,3,13];2 function_name [] debug;3 parameters [4,5,6,7,10];4 identifier [] self;5 identifier [] request;6 identifier [] message;7 default_parameter [8,9];8 identifier [] extra_tags;9 string [];10 default_parameter [11,12];11 identifier [] fail_silently;12 False [];13 block [14];14 ex... | Add a message with the ``DEBUG`` level. |
0 module [1];1 function_definition [2,3,5];2 function_name [] close;3 parameters [4];4 identifier [] self;5 block [6,12,44];6 import_from_statement [7,10];7 dotted_name [8,9];8 identifier [] matplotlib;9 identifier [] pyplot;10 dotted_name [11];11 identifier [] close;12 for_statement [13,14,23];13 identifier [] ax;14 s... | Close the plot and release its memory. |
0 module [1];1 function_definition [2,3,6];2 function_name [] push;3 parameters [4,5];4 identifier [] self;5 identifier [] obj;6 block [7,18,33,40];7 expression_statement [8];8 assignment [9,10];9 identifier [] rv;10 call [11,12];11 identifier [] getattr;12 argument_list [13,16,17];13 attribute [14,15];14 identifier []... | Pushes a new item to the stack |
0 module [1];1 function_definition [2,3,5];2 function_name [] filter_repeated;3 parameters [4];4 identifier [] self;5 block [6,19,41,60,79,98,114,133,142,162];6 expression_statement [7];7 assignment [8,9];8 identifier [] defaults;9 dictionary [10,13,16];10 pair [11,12];11 string [] occurrences;12 integer [] 1;13 pair [... | Determine whether a check is repeating. |
0 module [1];1 function_definition [2,3,6];2 function_name [] scale_image;3 parameters [4,5];4 identifier [] image;5 identifier [] new_width;6 block [7,15,24,33,46];7 expression_statement [8];8 assignment [9,12];9 tuple_pattern [10,11];10 identifier [] original_width;11 identifier [] original_height;12 attribute [13,14... | Resizes an image preserving the aspect ratio. |
0 module [1];1 function_definition [2,3,7];2 function_name [] run;3 parameters [4,5,6];4 identifier [] bam_file;5 identifier [] sample;6 identifier [] out_dir;7 block [8,12,27,42];8 expression_statement [9];9 assignment [10,11];10 identifier [] out;11 dictionary [];12 expression_statement [13];13 assignment [14,15];14 ... | Standard QC metrics for chipseq |
0 module [1];1 function_definition [2,3,8];2 function_name [] saveFormatFileEnc;3 parameters [4,5,6,7];4 identifier [] self;5 identifier [] filename;6 identifier [] encoding;7 identifier [] format;8 block [9,23];9 expression_statement [10];10 assignment [11,12];11 identifier [] ret;12 call [13,16];13 attribute [14,15];... | Dump an XML document to a file or an URL. |
0 module [1];1 function_definition [2,3,6];2 function_name [] save_file;3 parameters [4,5];4 identifier [] fullpath;5 identifier [] entry;6 block [7,75];7 with_statement [8,22];8 with_clause [9];9 with_item [10];10 as_pattern [11,20];11 call [12,15];12 attribute [13,14];13 identifier [] tempfile;14 identifier [] NamedT... | Save a message file out, without mangling the headers |
0 module [1];1 function_definition [2,3,5];2 function_name [] unfix_parameters;3 parameters [4];4 identifier [] self;5 block [6];6 for_statement [7,10,19];7 pattern_list [8,9];8 identifier [] W;9 identifier [] b;10 call [11,12];11 identifier [] zip;12 argument_list [13,16];13 attribute [14,15];14 identifier [] self;15 ... | Helper function that unfixes all parameters |
0 module [1];1 function_definition [2,3,5];2 function_name [] secure;3 parameters [4];4 identifier [] self;5 block [6,13,35,57];6 expression_statement [7];7 call [8,11];8 attribute [9,10];9 identifier [] log;10 identifier [] debug;11 argument_list [12];12 string [] ConCache securing sockets;13 if_statement [14,24];14 c... | secure the sockets for root-only access |
0 module [1];1 function_definition [2,3,8];2 function_name [] _get_snpeff_cmd;3 parameters [4,5,6,7];4 identifier [] cmd_name;5 identifier [] datadir;6 identifier [] data;7 identifier [] out_file;8 block [9,21,33,67,76,88,114,125,129];9 expression_statement [10];10 assignment [11,12];11 identifier [] resources;12 call ... | Retrieve snpEff base command line. |
0 module [1];1 function_definition [2,3,5];2 function_name [] delay_1;3 parameters [4];4 identifier [] year;5 block [6,21,30,44,62];6 expression_statement [7];7 assignment [8,9];8 identifier [] months;9 call [10,11];10 identifier [] trunc;11 argument_list [12];12 binary_operator [13,20] /;13 () [14];14 binary_operator ... | Test for delay of start of new year and to avoid |
0 module [1];1 function_definition [2,3,5];2 function_name [] draw;3 parameters [4];4 identifier [] self;5 block [6,13,36,50];6 if_statement [7,11];7 not_operator [8];8 attribute [9,10];9 identifier [] self;10 identifier [] visible;11 block [12];12 return_statement [];13 if_statement [14,17];14 attribute [15,16];15 ide... | Draws the Text in the window. |
0 module [1];1 function_definition [2,3,7];2 function_name [] convert;3 parameters [4,5];4 identifier [] input_file_name;5 dictionary_splat_pattern [6];6 identifier [] kwargs;7 block [8,16,24,47,146,156];8 expression_statement [9];9 assignment [10,11];10 identifier [] delimiter;11 boolean_operator [12,15] or;12 subscri... | Convert CSV file to HTML table |
0 module [1];1 function_definition [2,3,9];2 function_name [] determine_2;3 parameters [4,5,6,7,8];4 identifier [] self;5 identifier [] container_name;6 identifier [] container_alias;7 identifier [] meta;8 identifier [] val;9 block [10,17];10 if_statement [11,14];11 comparison_operator [12,13] is not;12 identifier [] c... | Default the alias to the name of the container |
0 module [1];1 function_definition [2,3,6];2 function_name [] read_nb_content;3 parameters [4,5];4 identifier [] cells;5 identifier [] mod_name;6 block [7,9,13,46];7 expression_statement [8];8 string [] Build a dictionary containing the position of the `cells`.;9 expression_statement [10];10 assignment [11,12];11 ident... | Build a dictionary containing the position of the `cells`. |
0 module [1];1 function_definition [2,3,5];2 function_name [] _read_single_point_data;3 parameters [4];4 identifier [] self;5 block [6,19];6 expression_statement [7];7 assignment [8,9];8 identifier [] temp_dict;9 call [10,11];10 identifier [] read_pattern;11 argument_list [12,15];12 attribute [13,14];13 identifier [] s... | Parses final free energy information from single-point calculations. |
0 module [1];1 function_definition [2,3,5];2 function_name [] paused_partitions;3 parameters [4];4 identifier [] self;5 block [6];6 return_statement [7];7 call [8,9];8 identifier [] set;9 generator_expression [10,11,16];10 identifier [] partition;11 for_in_clause [12,13];12 identifier [] partition;13 attribute [14,15];... | Return current set of paused TopicPartitions. |
0 module [1];1 function_definition [2,3,5];2 function_name [] csvtolist;3 parameters [4];4 identifier [] inputstr;5 block [6,19,23,31];6 expression_statement [7];7 assignment [8,9];8 identifier [] reader;9 call [10,13];10 attribute [11,12];11 identifier [] csv;12 identifier [] reader;13 argument_list [14,16];14 list [1... | converts a csv string into a list |
0 module [1];1 function_definition [2,3,6];2 function_name [] benchmark;3 parameters [4,5];4 identifier [] N;5 identifier [] gates;6 block [7,18,27,49,117];7 expression_statement [8];8 assignment [9,10];9 identifier [] qubits;10 call [11,12];11 identifier [] list;12 argument_list [13];13 call [14,15];14 identifier [] r... | Create and run a circuit with N qubits and given number of gates |
0 module [1];1 function_definition [2,3,6];2 function_name [] load;3 parameters [4,5];4 identifier [] self;5 identifier [] path;6 block [7,18,29,63];7 expression_statement [8];8 assignment [9,10];9 identifier [] path;10 call [11,16];11 attribute [12,15];12 attribute [13,14];13 identifier [] os;14 identifier [] path;15 ... | Load a manifest at path or return a suitable manifest already loaded. |
0 module [1];1 function_definition [2,3,5];2 function_name [] to_snake_case;3 parameters [4];4 identifier [] s;5 block [6];6 return_statement [7];7 call [8,11];8 attribute [9,10];9 identifier [] re;10 identifier [] sub;11 argument_list [12,13,35];12 string [] ([^_A-Z])([A-Z]);13 lambda [14,16];14 lambda_parameters [15]... | Converts camel-case identifiers to snake-case. |
0 module [1];1 function_definition [2,3,5];2 function_name [] cleanup;3 parameters [4];4 identifier [] self;5 block [6,18,29];6 for_statement [7,8,11];7 identifier [] future;8 attribute [9,10];9 identifier [] self;10 identifier [] futures;11 block [12];12 expression_statement [13];13 call [14,17];14 attribute [15,16];1... | Release resources used during shell execution |
0 module [1];1 function_definition [2,3,10];2 function_name [] division_content;3 parameters [4,5,6,7];4 identifier [] self;5 identifier [] election_day;6 identifier [] division;7 default_parameter [8,9];8 identifier [] special;9 False [];10 block [11,17,28,49,73,99];11 import_from_statement [12,15];12 dotted_name [13,... | Return serialized content for a division page. |
0 module [1];1 function_definition [2,3,7];2 function_name [] filter_objects_by_section;3 parameters [4,5,6];4 identifier [] self;5 identifier [] rels;6 identifier [] section;7 block [8,19,36,46,62];8 expression_statement [9];9 assignment [10,11];10 identifier [] subtree;11 call [12,15];12 attribute [13,14];13 identifi... | Build a queryset containing all objects in the section subtree. |
0 module [1];1 function_definition [2,3,5];2 function_name [] _checkout;3 parameters [4];4 identifier [] self;5 block [6,20];6 expression_statement [7];7 assignment [8,9];8 identifier [] cmd;9 list [10,11,12,13,14,17] ["atomic", "mount", "--storage", "ostree", self.ref_image_name, self.mount_point];10 string [] atomic;... | check out the image filesystem on self.mount_point |
0 module [1];1 function_definition [2,3,8];2 function_name [] _get_distance_term;3 parameters [4,5,6,7];4 identifier [] self;5 identifier [] C;6 identifier [] rjb;7 identifier [] mag;8 block [9,18,35];9 expression_statement [10];10 assignment [11,12];11 identifier [] c_3;12 call [13,16];13 attribute [14,15];14 identifi... | Returns the general distance scaling term - equation 2 |
0 module [1];1 function_definition [2,3,9];2 function_name [] parallel_combine_variants;3 parameters [4,5,6,7,8];4 identifier [] orig_files;5 identifier [] out_file;6 identifier [] ref_file;7 identifier [] config;8 identifier [] run_parallel;9 block [10,14,113,122,128,143,152,169];10 expression_statement [11];11 assign... | Combine variants in parallel by chromosome, concatenating final outputs. |
0 module [1];1 function_definition [2,3,6];2 function_name [] graph_response;3 parameters [4,5];4 identifier [] graph;5 identifier [] format;6 block [7,14,23,32,36,47,60];7 expression_statement [8];8 assignment [9,10];9 identifier [] fmt;10 call [11,12];11 identifier [] guess_format;12 argument_list [13];13 identifier ... | Return a proper flask response for a RDF resource given an expected format. |
0 module [1];1 function_definition [2,3,10];2 function_name [] assertpath;3 parameters [4,5,8];4 identifier [] path_;5 default_parameter [6,7];6 identifier [] msg;7 string [];8 dictionary_splat_pattern [9];9 identifier [] kwargs;10 block [11,15,29,43];11 if_statement [12,13];12 identifier [] NO_ASSERTS;13 block [14];14... | Asserts that a patha exists |
0 module [1];1 function_definition [2,3,5];2 function_name [] to_dict;3 parameters [4];4 identifier [] self;5 block [6];6 return_statement [7];7 dictionary [8,13,18,23];8 pair [9,10];9 string [] schema;10 attribute [11,12];11 identifier [] self;12 identifier [] schema;13 pair [14,15];14 string [] table;15 attribute [16... | Serialize representation of the column for local caching. |
0 module [1];1 function_definition [2,3,6];2 function_name [] apply;3 parameters [4,5];4 identifier [] self;5 identifier [] coordinates;6 block [7];7 for_statement [8,9,12];8 identifier [] i;9 attribute [10,11];10 identifier [] self;11 identifier [] affected_atoms;12 block [13];13 expression_statement [14];14 assignmen... | Apply this distortion to Cartesian coordinates |
0 module [1];1 function_definition [2,3,5];2 function_name [] hard_reset;3 parameters [4];4 identifier [] self;5 block [6,26,41,47,53,59,65];6 if_statement [7,16];7 boolean_operator [8,13] and;8 comparison_operator [9,12] is not;9 attribute [10,11];10 identifier [] self;11 identifier [] seq;12 None [];13 attribute [14,... | Resets the iterator and ignore roll over data |
0 module [1];1 function_definition [2,3,11];2 function_name [] GenerateFile;3 parameters [4,5,8];4 identifier [] self;5 default_parameter [6,7];6 identifier [] input_filename;7 None [];8 default_parameter [9,10];9 identifier [] output_filename;10 None [];11 block [12,23,42,51,73];12 if_statement [13,16];13 comparison_o... | Generates a file from a template, interpolating config values. |
0 module [1];1 function_definition [2,3,5];2 function_name [] to_task;3 parameters [4];4 identifier [] self;5 block [6,14,24,38,56,65];6 expression_statement [7];7 assignment [8,9];8 identifier [] task_args;9 call [10,13];10 attribute [11,12];11 identifier [] self;12 identifier [] get_task_args;13 argument_list [];14 e... | Return a task object representing this MessageProcessor job. |
0 module [1];1 function_definition [2,3,14];2 function_name [] skull_strip;3 parameters [4,5,8,11];4 identifier [] dset;5 default_parameter [6,7];6 identifier [] suffix;7 string [] _ns;8 default_parameter [9,10];9 identifier [] prefix;10 None [];11 default_parameter [12,13];12 identifier [] unifize;13 True [];14 block ... | use bet to strip skull from given anatomy |
0 module [1];1 function_definition [2,3,6];2 function_name [] generate_table;3 parameters [4,5];4 identifier [] self;5 identifier [] rows;6 block [7,17,100];7 expression_statement [8];8 assignment [9,10];9 identifier [] table;10 call [11,12];11 identifier [] PrettyTable;12 argument_list [13];13 dictionary_splat [14];14... | Generates from a list of rows a PrettyTable object. |
0 module [1];1 function_definition [2,3,5];2 function_name [] view;3 parameters [4];4 identifier [] self;5 block [6,11,19,101,145];6 expression_statement [7];7 call [8,9];8 identifier [] print;9 argument_list [10];10 string [];11 expression_statement [12];12 assignment [13,16];13 pattern_list [14,15];14 identifier [] d... | Print package description by repository |
0 module [1];1 function_definition [2,3,5];2 function_name [] hash;3 parameters [4];4 identifier [] self;5 block [6,27];6 if_statement [7,13];7 not_operator [8];8 call [9,10];9 identifier [] hasattr;10 argument_list [11,12];11 identifier [] self;12 string [] _hash;13 block [14];14 expression_statement [15];15 assignmen... | Returns a hash of the cursor as an int. |
0 module [1];1 function_definition [2,3,6];2 function_name [] get;3 parameters [4,5];4 identifier [] self;5 identifier [] key;6 block [7];7 return_statement [8];8 call [9,12];9 attribute [10,11];10 identifier [] self;11 identifier [] _object_class;12 argument_list [13];13 call [14,17];14 attribute [15,16];15 identifier... | Get data associated with provided key. |
0 module [1];1 function_definition [2,3,5];2 function_name [] dumps;3 parameters [4];4 identifier [] self;5 block [6];6 return_statement [7];7 list [8,17] [self.__class__.__name__.lower(), [x.dumps() for x in self.ts]];8 call [9,16];9 attribute [10,15];10 attribute [11,14];11 attribute [12,13];12 identifier [] self;13 ... | Override the default to avoid duplicate dump. |
0 module [1];1 function_definition [2,3,8];2 function_name [] calculate_hash_of_dir;3 parameters [4,5];4 identifier [] directory;5 default_parameter [6,7];6 identifier [] file_list;7 None [];8 block [9,15,29,138];9 expression_statement [10];10 assignment [11,12];11 identifier [] md5_hash;12 call [13,14];13 identifier [... | Calculate hash of directory. |
0 module [1];1 function_definition [2,3,6];2 function_name [] first_seen;3 parameters [4,5];4 identifier [] self;5 identifier [] first_seen;6 block [7];7 expression_statement [8];8 assignment [9,14];9 subscript [10,13];10 attribute [11,12];11 identifier [] self;12 identifier [] _group_data;13 string [] firstSeen;14 cal... | Set Document first seen. |
0 module [1];1 function_definition [2,3,12];2 function_name [] cublasCtpsv;3 parameters [4,5,6,7,8,9,10,11];4 identifier [] handle;5 identifier [] uplo;6 identifier [] trans;7 identifier [] diag;8 identifier [] n;9 identifier [] AP;10 identifier [] x;11 identifier [] incx;12 block [13,41];13 expression_statement [14];1... | Solve complex triangular-packed system with one right-hand side. |
0 module [1];1 function_definition [2,3,7];2 function_name [] open_python;3 parameters [4,5,6];4 identifier [] self;5 identifier [] message;6 identifier [] namespace;7 block [8,13,16,19,33,40,47];8 import_from_statement [9,11];9 dotted_name [10];10 identifier [] code;11 dotted_name [12];12 identifier [] InteractiveCons... | Open interactive python console |
0 module [1];1 function_definition [2,3,5];2 function_name [] example;3 parameters [4];4 identifier [] fn;5 block [6,65,72];6 decorated_definition [7,14];7 decorator [8];8 call [9,12];9 attribute [10,11];10 identifier [] functools;11 identifier [] wraps;12 argument_list [13];13 identifier [] fn;14 function_definition [... | Wrap the examples so they generate readable output |
0 module [1];1 function_definition [2,3,9];2 function_name [] unit_conversion;3 parameters [4,5,6];4 identifier [] thing;5 identifier [] units;6 default_parameter [7,8];7 identifier [] length;8 False [];9 block [10,17,42];10 if_statement [11,14];11 comparison_operator [12,13] ==;12 string [] n/a;13 identifier [] thing;... | converts base data between metric, imperial, or nautical units |
0 module [1];1 function_definition [2,3,6];2 function_name [] run_tensorboard;3 parameters [4,5];4 identifier [] run_id;5 identifier [] tflog_id;6 block [7,15,28,39,54,76,91,97,107,116];7 expression_statement [8];8 assignment [9,10];9 identifier [] data;10 subscript [11,14];11 attribute [12,13];12 identifier [] current... | Launch TensorBoard for a given run ID and log ID of that run. |
0 module [1];1 function_definition [2,3,5];2 function_name [] _create_placeholders;3 parameters [4];4 identifier [] self;5 block [6,26];6 expression_statement [7];7 assignment [8,11];8 attribute [9,10];9 identifier [] self;10 identifier [] input_data;11 call [12,15];12 attribute [13,14];13 identifier [] tf;14 identifie... | Create the computational graph's placeholders. |
0 module [1];1 function_definition [2,3,7];2 function_name [] cfitsio_version;3 parameters [4];4 default_parameter [5,6];5 identifier [] asfloat;6 False [];7 block [8,18];8 expression_statement [9];9 assignment [10,11];10 identifier [] ver;11 binary_operator [12,13] %;12 string [] %0.3f;13 call [14,17];14 attribute [15... | Return the cfitsio version as a string. |
0 module [1];1 function_definition [2,3,6];2 function_name [] findrec;3 parameters [4,5];4 identifier [] s;5 identifier [] data;6 block [7,11,41];7 expression_statement [8];8 assignment [9,10];9 identifier [] datablock;10 list [] [];11 for_statement [12,13,14];12 identifier [] rec;13 identifier [] data;14 block [15];15... | finds all the records belonging to s in data |
0 module [1];1 function_definition [2,3,5];2 function_name [] remove;3 parameters [4];4 identifier [] id_;5 block [6,32];6 with_statement [7,10];7 with_clause [8];8 with_item [9];9 identifier [] LOCK;10 block [11,21];11 expression_statement [12];12 assignment [13,14];13 identifier [] thread;14 call [15,18];15 attribute... | Remove the callback and its schedule |
0 module [1];1 function_definition [2,3,7];2 function_name [] right;3 parameters [4,5,6];4 identifier [] ctx;5 identifier [] text;6 identifier [] num_chars;7 block [8,18];8 expression_statement [9];9 assignment [10,11];10 identifier [] num_chars;11 call [12,15];12 attribute [13,14];13 identifier [] conversions;14 ident... | Returns the last characters in a text string |
0 module [1];1 function_definition [2,3,15];2 function_name [] fetcher_loop_v1;3 parameters [4,5,6,9,12];4 identifier [] data_queue;5 identifier [] data_buffer;6 default_parameter [7,8];7 identifier [] pin_memory;8 False [];9 default_parameter [10,11];10 identifier [] pin_device_id;11 integer [] 0;12 default_parameter ... | Fetcher loop for fetching data from queue and put in reorder dict. |
0 module [1];1 function_definition [2,3,5];2 function_name [] transform_aglistener_output;3 parameters [4];4 identifier [] result;5 block [6,11,17];6 import_from_statement [7,9];7 dotted_name [8];8 identifier [] collections;9 dotted_name [10];10 identifier [] OrderedDict;11 import_from_statement [12,15];12 dotted_name ... | Transforms the result of Availability Group Listener to eliminate unnecessary parameters. |
0 module [1];1 function_definition [2,3,14];2 function_name [] hparams_to_batching_scheme;3 parameters [4,5,8,11];4 identifier [] hparams;5 default_parameter [6,7];6 identifier [] drop_long_sequences;7 False [];8 default_parameter [9,10];9 identifier [] shard_multiplier;10 integer [] 1;11 default_parameter [12,13];12 i... | Wrapper around _batching_scheme with hparams. |
0 module [1];1 function_definition [2,3,6];2 function_name [] _ident;3 parameters [4];4 list_splat_pattern [5];5 identifier [] elements;6 block [7];7 try_statement [8,19];8 block [9];9 return_statement [10];10 comparison_operator [11,18] ==;11 call [12,13];12 identifier [] len;13 argument_list [14];14 call [15,16];15 i... | Return True if all sequences are equal. |
0 module [1];1 function_definition [2,3,4];2 function_name [] ps;3 parameters [];4 block [5,11,22];5 expression_statement [6];6 assignment [7,8];7 identifier [] containers;8 call [9,10];9 identifier [] get_containers;10 argument_list [];11 expression_statement [12];12 assignment [13,14];13 identifier [] containers;14 l... | Print a table of all running containers on a host |
0 module [1];1 function_definition [2,3,5];2 function_name [] _next_move_direction;3 parameters [4];4 identifier [] self;5 block [6,15,29,55,61];6 expression_statement [7];7 assignment [8,9];8 identifier [] nmoves;9 call [10,11];10 identifier [] len;11 argument_list [12];12 attribute [13,14];13 identifier [] self;14 id... | pick a move at random from the list of moves |
0 module [1];1 function_definition [2,3,9];2 function_name [] insert;3 parameters [4,5,6,7];4 identifier [] self;5 identifier [] resource;6 identifier [] doc_or_docs;7 dictionary_splat_pattern [8];8 identifier [] kwargs;9 block [10,14,26,96,103];10 expression_statement [11];11 assignment [12,13];12 identifier [] ids;13... | Insert document, it must be new if there is ``_id`` in it. |
0 module [1];1 function_definition [2,3,5];2 function_name [] _get_domain_text_of_authoritative_zone;3 parameters [4];4 identifier [] self;5 block [6,11,26,34,41,51,59,72,77,85,89,98,149,155,160];6 import_from_statement [7,9];7 dotted_name [8];8 identifier [] bs4;9 dotted_name [10];10 identifier [] BeautifulSoup;11 exp... | Get the authoritative name zone. |
0 module [1];1 function_definition [2,3,5];2 function_name [] _getID;3 parameters [4];4 identifier [] self;5 block [6,10,74];6 expression_statement [7];7 assignment [8,9];8 identifier [] id;9 list [] [];10 for_statement [11,12,15];11 identifier [] key;12 attribute [13,14];13 identifier [] self;14 identifier [] _sqlPrim... | Get the ID values as a tuple annotated by sqlPrimary |
0 module [1];1 function_definition [2,3,5];2 function_name [] pop_trigger;3 parameters [4];4 identifier [] data;5 block [6,15,19,76,96];6 expression_statement [7];7 assignment [8,9];8 identifier [] trigger_name;9 call [10,13];10 attribute [11,12];11 identifier [] data;12 identifier [] pop;13 argument_list [14];14 strin... | Pops trigger and trigger args from a given dict. |
0 module [1];1 function_definition [2,3,5];2 function_name [] timex_ends;3 parameters [4];4 identifier [] self;5 block [6,21];6 if_statement [7,14];7 not_operator [8];8 call [9,12];9 attribute [10,11];10 identifier [] self;11 identifier [] is_tagged;12 argument_list [13];13 identifier [] TIMEXES;14 block [15];15 expres... | The list of end positions of ``timexes`` layer elements. |
0 module [1];1 function_definition [2,3,6];2 function_name [] add_definitions;3 parameters [4,5];4 identifier [] definitions;5 identifier [] operations;6 block [7];7 for_statement [8,9,14];8 identifier [] definition_schema;9 call [10,11];10 identifier [] iter_definitions;11 argument_list [12,13];12 identifier [] defini... | Add definitions to swagger. |
0 module [1];1 function_definition [2,3,7,9];2 function_name [] reminders_list;3 parameters [4,5];4 identifier [] self;5 dictionary_splat_pattern [6];6 identifier [] kwargs;7 type [8];8 identifier [] SlackResponse;9 block [10,16];10 expression_statement [11];11 call [12,15];12 attribute [13,14];13 identifier [] self;14... | Lists all reminders created by or for a given user. |
0 module [1];1 function_definition [2,3,6];2 function_name [] make_valid_xml_name;3 parameters [4,5];4 identifier [] key;5 identifier [] attr;6 block [7,24,31,38,48,62,84,90,94];7 expression_statement [8];8 call [9,12];9 attribute [10,11];10 identifier [] LOG;11 identifier [] info;12 argument_list [13];13 binary_operat... | Tests an XML name and fixes it if invalid |
0 module [1];1 function_definition [2,3,5];2 function_name [] shortDescription;3 parameters [4];4 identifier [] self;5 block [6,15,41];6 expression_statement [7];7 assignment [8,9];8 identifier [] cd;9 call [10,11];10 identifier [] getattr;11 argument_list [12,13,14];12 identifier [] self;13 string [] classDescription;... | Overrides property from Event base class. |
0 module [1];1 function_definition [2,3,6];2 function_name [] write_to_file;3 parameters [4,5];4 identifier [] self;5 identifier [] f;6 block [7];7 for_statement [8,11,18];8 pattern_list [9,10];9 identifier [] section;10 identifier [] values;11 call [12,17];12 attribute [13,16];13 attribute [14,15];14 identifier [] sel... | Write configuration to a file-like object. |
0 module [1];1 function_definition [2,3,8];2 function_name [] switch_or_run;3 parameters [4,5];4 identifier [] cmd;5 default_parameter [6,7];6 identifier [] venv_name;7 None [];8 block [9,18,24];9 if_statement [10,11];10 identifier [] cmd;11 block [12];12 return_statement [13];13 call [14,15];14 identifier [] _run;15 a... | Switch or run in this env |
0 module [1];1 function_definition [2,3,6];2 function_name [] from_statement;3 parameters [4,5];4 identifier [] cls;5 identifier [] statement;6 block [7];7 if_statement [8,17,25,41];8 comparison_operator [9,12] in;9 subscript [10,11];10 identifier [] statement;11 integer [] 0;12 list [13,14,15,16] ["TS", "TIMESTAMP", "... | Create a selection function from a statement |
0 module [1];1 function_definition [2,3,5];2 function_name [] Start;3 parameters [4];4 identifier [] self;5 block [6,25,37,51,58,76,84];6 if_statement [7,23];7 comparison_operator [8,22] ==;8 call [9,14];9 attribute [10,13];10 attribute [11,12];11 identifier [] self;12 identifier [] hunt_obj;13 identifier [] Get;14 arg... | This uploads the rules to the foreman and, thus, starts the hunt. |
0 module [1];1 function_definition [2,3,5];2 function_name [] _is_modification_or_activity;3 parameters [4];4 identifier [] feature;5 block [6,30,38,45,57,72];6 if_statement [7,27];7 not_operator [8];8 () [9];9 boolean_operator [10,18,19] or;10 call [11,12];11 identifier [] isinstance;12 argument_list [13,14];13 identi... | Return True if the feature is a modification |
0 module [1];1 function_definition [2,3,9];2 function_name [] _debug;3 parameters [4,5,6];4 identifier [] self;5 identifier [] out;6 default_parameter [7,8];7 identifier [] print_prefix;8 True [];9 block [10];10 if_statement [11,14];11 attribute [12,13];12 identifier [] self;13 identifier [] debug;14 block [15,52];15 i... | Print out to stderr, if debugging is enabled. |
0 module [1];1 function_definition [2,3,5];2 function_name [] lookup;3 parameters [4];4 identifier [] self;5 block [6,11];6 assert_statement [7];7 not_operator [8];8 attribute [9,10];9 identifier [] self;10 identifier [] is_existing;11 try_statement [12,179];12 block [13,37,47,53,63,69];13 expression_statement [14];14 ... | Lookup existing account, if any. |
0 module [1];1 function_definition [2,3,9];2 function_name [] _get_data_collections;3 parameters [4,5,6,7,8];4 identifier [] dnr_values;5 identifier [] dhr_values;6 identifier [] metadata;7 identifier [] timestep;8 identifier [] is_leap_year;9 block [10,22,42,50,70,78];10 expression_statement [11];11 assignment [12,13]... | Return two data collections for Direct Normal , Diffuse Horizontal |
0 module [1];1 function_definition [2,3,4];2 function_name [] dumps;3 parameters [];4 block [5,9,33];5 expression_statement [6];6 assignment [7,8];7 identifier [] d;8 dictionary [];9 for_statement [10,13,18];10 pattern_list [11,12];11 identifier [] k;12 identifier [] v;13 call [14,17];14 attribute [15,16];15 identifier... | Returns a string representation of the FILTERS dictionary. |
0 module [1];1 function_definition [2,3,6];2 function_name [] process_documentline;3 parameters [4,5];4 identifier [] line;5 identifier [] nanopubs_metadata;6 block [7,17,26,35,41];7 expression_statement [8];8 assignment [9,10];9 identifier [] matches;10 call [11,14];11 attribute [12,13];12 identifier [] re;13 identifi... | Process SET DOCUMENT line in BEL script |
0 module [1];1 function_definition [2,3,5];2 function_name [] total_core;3 parameters [4];4 identifier [] self;5 block [6,24];6 expression_statement [7];7 assignment [8,9];8 identifier [] corefile;9 call [10,15];10 attribute [11,14];11 attribute [12,13];12 identifier [] os;13 identifier [] path;14 identifier [] join;15... | Determine the total number of core genes present |
0 module [1];1 function_definition [2,3,8];2 function_name [] fai_from_bam;3 parameters [4,5,6,7];4 identifier [] ref_file;5 identifier [] bam_file;6 identifier [] out_file;7 identifier [] data;8 block [9,26,111];9 expression_statement [10];10 assignment [11,12];11 identifier [] contigs;12 call [13,14];13 identifier []... | Create a fai index with only contigs in the input BAM file. |
0 module [1];1 function_definition [2,3,5];2 function_name [] clear_document;3 parameters [4];4 identifier [] self;5 block [6,14,22,30,38,46,54,62,70];6 expression_statement [7];7 call [8,13];8 attribute [9,12];9 attribute [10,11];10 identifier [] self;11 identifier [] _components;12 identifier [] clear;13 argument_lis... | Clears ALL items from document, reseting it to clean |
0 module [1];1 function_definition [2,3,7];2 function_name [] process_cpp;3 parameters [4,5,6];4 identifier [] self;5 identifier [] path;6 identifier [] suffix;7 block [8,14,27,33,43];8 expression_statement [9];9 call [10,13];10 attribute [11,12];11 identifier [] _cpplint_state;12 identifier [] ResetErrorCounts;13 argu... | Process a cpp file. |
0 module [1];1 function_definition [2,3,6];2 function_name [] rollforward;3 parameters [4,5];4 identifier [] self;5 identifier [] date;6 block [7];7 if_statement [8,14,17];8 call [9,12];9 attribute [10,11];10 identifier [] self;11 identifier [] onOffset;12 argument_list [13];13 identifier [] date;14 block [15];15 retur... | Roll date forward to nearest start of year |
0 module [1];1 function_definition [2,3,6];2 function_name [] cyvcf_add_filter;3 parameters [4,5];4 identifier [] rec;5 identifier [] name;6 block [7,29,47];7 if_statement [8,11,23];8 attribute [9,10];9 identifier [] rec;10 identifier [] FILTER;11 block [12];12 expression_statement [13];13 assignment [14,15];14 identif... | Add a FILTER value to a cyvcf2 record |
0 module [1];1 function_definition [2,3,5];2 function_name [] lstm_init_states;3 parameters [4];4 identifier [] batch_size;5 block [6,12,33,43,60];6 expression_statement [7];7 assignment [8,9];8 identifier [] hp;9 call [10,11];10 identifier [] Hyperparams;11 argument_list [];12 expression_statement [13];13 assignment [... | Returns a tuple of names and zero arrays for LSTM init states |
0 module [1];1 function_definition [2,3,7];2 function_name [] write_json_plan;3 parameters [4,5,6];4 identifier [] self;5 identifier [] proposed_layout;6 identifier [] proposed_plan_file;7 block [8];8 with_statement [9,19];9 with_clause [10];10 with_item [11];11 as_pattern [12,17];12 call [13,14];13 identifier [] open;... | Dump proposed json plan to given output file for future usage. |
0 module [1];1 function_definition [2,3,4];2 function_name [] transformer_parsing_big;3 parameters [];4 block [5,11,17,23,29,35,41,47];5 expression_statement [6];6 assignment [7,8];7 identifier [] hparams;8 call [9,10];9 identifier [] transformer_big;10 argument_list [];11 expression_statement [12];12 assignment [13,16... | HParams for parsing on WSJ semi-supervised. |
0 module [1];1 function_definition [2,3,9];2 function_name [] tag;3 parameters [4,5,7];4 identifier [] self;5 list_splat_pattern [6];6 identifier [] tag;7 dictionary_splat_pattern [8];8 identifier [] kwtags;9 block [10,51,60];10 if_statement [11,13,15,42];11 not_operator [12];12 identifier [] tag;13 block [14];14 pass_... | Tag a Property instance with metadata dictionary |
0 module [1];1 function_definition [2,3,10];2 function_name [] cli;3 parameters [4,5,6,7,8,9];4 identifier [] env;5 identifier [] identifier;6 identifier [] allocation;7 identifier [] port;8 identifier [] routing_type;9 identifier [] routing_method;10 block [11,22,33,52];11 expression_statement [12];12 assignment [13,1... | Adds a new load_balancer service. |
0 module [1];1 function_definition [2,3,5];2 function_name [] read_chunked;3 parameters [4];4 identifier [] self;5 block [6,12];6 expression_statement [7];7 call [8,11];8 attribute [9,10];9 identifier [] self;10 identifier [] _load_metadata;11 argument_list [];12 for_statement [13,14,20];13 identifier [] i;14 call [15,... | Return iterator over container fragments of data source |
0 module [1];1 function_definition [2,3,5];2 function_name [] init;3 parameters [4];4 identifier [] self;5 block [6,14];6 if_statement [7,11];7 not_operator [8];8 attribute [9,10];9 identifier [] self;10 identifier [] export_enable;11 block [12];12 return_statement [13];13 None [];14 try_statement [15,68];15 block [16,... | Init the connection to the rabbitmq server. |
0 module [1];1 function_definition [2,3,8];2 function_name [] delete_os_dummy_rtr_nwk;3 parameters [4,5,6,7];4 identifier [] self;5 identifier [] rtr_id;6 identifier [] net_id;7 identifier [] subnet_id;8 block [9,15,22,36,42];9 expression_statement [10];10 assignment [11,12];11 identifier [] subnet_lst;12 call [13,14];... | Delete the dummy interface to the router. |
0 module [1];1 function_definition [2,3,6];2 function_name [] sponsor_or_site;3 parameters [4,5];4 identifier [] self;5 identifier [] value;6 block [7,27];7 if_statement [8,13];8 comparison_operator [9,10] not in;9 identifier [] value;10 attribute [11,12];11 identifier [] Comment;12 identifier [] VALID_SPONSOR_OR_SITE_... | Set Originator with validation of input |
0 module [1];1 function_definition [2,3,8];2 function_name [] cli;3 parameters [4,5,6,7];4 identifier [] env;5 identifier [] volume_id;6 identifier [] reason;7 identifier [] immediate;8 block [9,20,41,52];9 expression_statement [10];10 assignment [11,12];11 identifier [] file_storage_manager;12 call [13,16];13 attribut... | Cancel existing snapshot space for a given volume. |
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