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0 module [1];1 function_definition [2,3,5];2 function_name [] unauthorized_view;3 parameters [4];4 identifier [] self;5 block [6,16,28];6 expression_statement [7];7 assignment [8,9];8 identifier [] url;9 binary_operator [10,13] +;10 attribute [11,12];11 identifier [] request;12 identifier [] script_root;13 attribute [1...
Prepare a Flash message and redirect to USER_UNAUTHORIZED_ENDPOINT
0 module [1];1 function_definition [2,3,10];2 function_name [] createReference;3 parameters [4,5,6,7];4 identifier [] self;5 identifier [] fromnode;6 identifier [] tonode;7 default_parameter [8,9];8 identifier [] edge_data;9 None [];10 block [11,20,38,48,59];11 if_statement [12,15];12 comparison_operator [13,14] is;13 ...
Create a reference from fromnode to tonode
0 module [1];1 function_definition [2,3,7];2 function_name [] mutate;3 parameters [4,5,6];4 identifier [] self;5 identifier [] node;6 identifier [] index;7 block [8,12,18,27,35];8 assert_statement [9];9 comparison_operator [10,11] ==;10 identifier [] index;11 integer [] 0;12 assert_statement [13];13 call [14,15];14 ide...
Modify the For loop to evaluate to None
0 module [1];1 function_definition [2,3,5];2 function_name [] ensure_file;3 parameters [4];4 identifier [] path;5 block [6];6 try_statement [7,46];7 block [8,15,42];8 expression_statement [9];9 assignment [10,11];10 identifier [] exists;11 call [12,13];12 identifier [] isfile;13 argument_list [14];14 identifier [] path...
Checks if file exists, if fails, tries to create file
0 module [1];1 function_definition [2,3,5];2 function_name [] _get_url_doc;3 parameters [4];4 identifier [] self;5 block [6,13,24,34];6 expression_statement [7];7 assignment [8,9];8 identifier [] resolver;9 call [10,11];10 identifier [] get_resolver;11 argument_list [12];12 None [];13 expression_statement [14];14 assig...
Return a list of URLs that map to this resource.
0 module [1];1 function_definition [2,3,6];2 function_name [] parse_band_status_update;3 parameters [4,5];4 identifier [] self;5 identifier [] message;6 block [7,21];7 expression_statement [8];8 call [9,14];9 attribute [10,13];10 attribute [11,12];11 identifier [] self;12 identifier [] log;13 identifier [] debug;14 arg...
Process incoming status updates from the service.
0 module [1];1 function_definition [2,3,7];2 function_name [] process_request;3 parameters [4,5,6];4 identifier [] self;5 identifier [] request;6 identifier [] client_address;7 block [8,14,22];8 expression_statement [9];9 call [10,13];10 attribute [11,12];11 identifier [] self;12 identifier [] collect_children;13 argum...
Fork a new subprocess to process the request.
0 module [1];1 function_definition [2,3,4];2 function_name [] sort_common_members;3 parameters [];4 block [5,11,15,22,26,43,50,75,89];5 expression_statement [6];6 assignment [7,8];7 identifier [] filename;8 binary_operator [9,10] +;9 identifier [] PREFIX;10 string [] /common_members.json;11 expression_statement [12];12...
Sorts the keys and members
0 module [1];1 function_definition [2,3,5];2 function_name [] to_dict;3 parameters [4];4 identifier [] self;5 block [6];6 return_statement [7];7 dictionary [8,13,18,23];8 pair [9,10];9 string [] total;10 attribute [11,12];11 identifier [] self;12 identifier [] total;13 pair [14,15];14 string [] subtotal;15 attribute [1...
Attribute values to dict
0 module [1];1 function_definition [2,3,6];2 function_name [] diff;3 parameters [4,5];4 identifier [] file_;5 identifier [] imports;6 block [7,15];7 expression_statement [8];8 assignment [9,10];9 identifier [] modules_not_imported;10 call [11,12];11 identifier [] compare_modules;12 argument_list [13,14];13 identifier [...
Display the difference between modules in a file and imported modules.
0 module [1];1 function_definition [2,3,7];2 function_name [] add_role;3 parameters [4,5];4 identifier [] role;5 dictionary_splat_pattern [6];6 identifier [] kwargs;7 block [8,24,33,41];8 expression_statement [9];9 assignment [10,11];10 identifier [] role_i;11 call [12,13];12 identifier [] Role;13 argument_list [14,19]...
Add a new role
0 module [1];1 function_definition [2,3,5];2 function_name [] _create_save_scenario_action;3 parameters [4];4 identifier [] self;5 block [6,15,40,49,58,67,80];6 expression_statement [7];7 assignment [8,9];8 identifier [] icon;9 call [10,11];10 identifier [] resources_path;11 argument_list [12,13,14];12 string [] img;13...
Create action for save scenario dialog.
0 module [1];1 function_definition [2,3,6];2 function_name [] text_has_changed;3 parameters [4,5];4 identifier [] self;5 identifier [] text;6 block [7,14];7 expression_statement [8];8 assignment [9,10];9 identifier [] text;10 call [11,12];11 identifier [] to_text_string;12 argument_list [13];13 identifier [] text;14 if...
Line edit's text has changed
0 module [1];1 function_definition [2,3,5];2 function_name [] start;3 parameters [4];4 identifier [] self;5 block [6,29,35,41];6 expression_statement [7];7 call [8,13];8 attribute [9,12];9 attribute [10,11];10 identifier [] self;11 identifier [] storage;12 identifier [] update;13 argument_list [14];14 dictionary [15,24...
Increment current term, vote for herself & send vote requests
0 module [1];1 function_definition [2,3,7];2 function_name [] cycle_list;3 parameters [4,5];4 identifier [] self;5 list_splat_pattern [6];6 identifier [] args;7 block [8,17];8 expression_statement [9];9 assignment [10,11];10 identifier [] noargs;11 comparison_operator [12,16] ==;12 call [13,14];13 identifier [] len;14 ...
return the list of cycles contained if the dataset
0 module [1];1 function_definition [2,3,5];2 function_name [] _guess_seqtype_from_file;3 parameters [4];4 identifier [] handle;5 block [6,8,22,87,94,97,105,120,129,145,161,171,181];6 expression_statement [7];7 string [] Guess the sequence type from the file's contents;8 if_statement [9,14];9 call [10,11];10 identifier ...
Guess the sequence type from the file's contents
0 module [1];1 function_definition [2,3,5];2 function_name [] print_events;3 parameters [4];4 identifier [] events;5 block [6,15,24,65];6 expression_statement [7];7 assignment [8,9];8 identifier [] columns;9 list [10,11,12,13,14] ['Date', 'Type', 'IP Address', 'label', 'username'];10 string [] Date;11 string [] Type;12...
Prints out the event log for a user
0 module [1];1 function_definition [2,3,5];2 function_name [] add_required_resources;3 parameters [4];4 identifier [] resources;5 block [6,58,86];6 expression_statement [7];7 assignment [8,9];8 identifier [] required;9 list [10,13,16,19,22,25,28,31,34,37,40,43,46,49,52,55] [["variation", "cosmic"], ["variation", "clinv...
Add default or empty values for required resources referenced in CWL
0 module [1];1 function_definition [2,3,5];2 function_name [] train_model;3 parameters [4];4 identifier [] model_folder;5 block [6,13,20,28,35,42];6 expression_statement [7];7 call [8,11];8 attribute [9,10];9 identifier [] os;10 identifier [] chdir;11 argument_list [12];12 identifier [] model_folder;13 expression_state...
Train the model in ``model_folder``.
0 module [1];1 function_definition [2,3,4,6];2 function_name [] _crates_cache;3 parameters [];4 type [5];5 identifier [] str;6 block [7];7 return_statement [8];8 call [9,14];9 attribute [10,13];10 attribute [11,12];11 identifier [] os;12 identifier [] environ;13 identifier [] get;14 argument_list [15,16];15 string [] X...
Return the path to the crates cache folder
0 module [1];1 function_definition [2,3,6];2 function_name [] connectTo;3 parameters [4,5];4 identifier [] self;5 identifier [] remoteRouteName;6 block [7,13];7 expression_statement [8];8 assignment [9,12];9 attribute [10,11];10 identifier [] self;11 identifier [] remoteRouteName;12 identifier [] remoteRouteName;13 if_...
Set the name of the route which will be added to outgoing boxes.
0 module [1];1 function_definition [2,3,19];2 function_name [] _crop_image;3 parameters [4,5,8,11,14,17];4 identifier [] image;5 default_parameter [6,7];6 identifier [] left;7 integer [] 0;8 default_parameter [9,10];9 identifier [] top;10 integer [] 0;11 default_parameter [12,13];12 identifier [] right;13 integer [] 0;...
Crop the border from the layout
0 module [1];1 function_definition [2,3,5];2 function_name [] publish;3 parameters [4];4 identifier [] self;5 block [6];6 try_statement [7,32];7 block [8];8 for_statement [9,10,23];9 identifier [] collection;10 call [11,21];11 attribute [12,20];12 call [13,18];13 attribute [14,17];14 attribute [15,16];15 identifier [] ...
Iterate over the scheduler collections and apply any actions found
0 module [1];1 function_definition [2,3,7];2 function_name [] query;3 parameters [4,5];4 identifier [] self;5 dictionary_splat_pattern [6];6 identifier [] options;7 block [8,23,27,31,35,45,51,57];8 if_statement [9,13];9 not_operator [10];10 attribute [11,12];11 identifier [] self;12 identifier [] _query_path;13 block [...
Return an iterator for the given items.
0 module [1];1 function_definition [2,3,8];2 function_name [] run;3 parameters [4,5];4 identifier [] self;5 default_parameter [6,7];6 identifier [] order;7 None [];8 block [9];9 for_statement [10,11,21];10 identifier [] event;11 call [12,17];12 attribute [13,16];13 attribute [14,15];14 identifier [] self;15 identifier ...
self.runner must be present
0 module [1];1 function_definition [2,3,11];2 function_name [] json;3 parameters [4,5,8];4 identifier [] self;5 default_parameter [6,7];6 identifier [] dict;7 None [];8 default_parameter [9,10];9 identifier [] indent;10 None [];11 block [12,24,57];12 if_statement [13,15];13 not_operator [14];14 identifier [] dict;15 bl...
Returns post JSON representation
0 module [1];1 function_definition [2,3,5];2 function_name [] clear_caches;3 parameters [4];4 identifier [] self;5 block [6,14,22];6 expression_statement [7];7 call [8,13];8 attribute [9,12];9 attribute [10,11];10 identifier [] self;11 identifier [] _single_node_repertoire_cache;12 identifier [] clear;13 argument_list ...
Clear the mice and repertoire caches.
0 module [1];1 function_definition [2,3,5];2 function_name [] _verbs_with_subjects;3 parameters [4];4 identifier [] doc;5 block [6,10,41];6 expression_statement [7];7 assignment [8,9];8 identifier [] verb_subj;9 list [] [];10 for_statement [11,12,13];11 identifier [] possible_subject;12 identifier [] doc;13 block [14];...
Given a spacy document return the verbs that have subjects
0 module [1];1 function_definition [2,3,5];2 function_name [] usb_info;3 parameters [4];4 identifier [] self;5 block [6];6 return_statement [7];7 call [8,9];8 identifier [] UsbInformation;9 argument_list [10,15,20,25,30];10 attribute [11,14];11 attribute [12,13];12 identifier [] self;13 identifier [] _abilities;14 iden...
The camera's USB information.
0 module [1];1 function_definition [2,3,8];2 function_name [] _domain_event_pmsuspend_cb;3 parameters [4,5,6,7];4 identifier [] conn;5 identifier [] domain;6 identifier [] reason;7 identifier [] opaque;8 block [9];9 expression_statement [10];10 call [11,12];11 identifier [] _salt_send_domain_event;12 argument_list [13,...
Domain suspend events handler
0 module [1];1 function_definition [2,3,9];2 function_name [] download;3 parameters [4,5,6];4 identifier [] self;5 identifier [] download_key;6 default_parameter [7,8];7 identifier [] raise_exception_on_failure;8 False [];9 block [10,22,45,64];10 expression_statement [11];11 assignment [12,13];12 identifier [] query;13...
Download the file represented by the download_key.
0 module [1];1 function_definition [2,3,7];2 function_name [] extern_store_bool;3 parameters [4,5,6];4 identifier [] self;5 identifier [] context_handle;6 identifier [] b;7 block [8,19];8 expression_statement [9];9 assignment [10,11];10 identifier [] c;11 call [12,17];12 attribute [13,16];13 attribute [14,15];14 identi...
Given a context and _Bool, return a new Handle to represent the _Bool.
0 module [1];1 function_definition [2,3,5];2 function_name [] full_path;3 parameters [4];4 identifier [] self;5 block [6];6 if_statement [7,17,22];7 call [8,16];8 attribute [9,15];9 call [10,11];10 identifier [] Path;11 argument_list [12];12 attribute [13,14];13 identifier [] self;14 identifier [] path;15 identifier []...
Return the full path to the file.
0 module [1];1 function_definition [2,3,5];2 function_name [] from_fs_path;3 parameters [4];4 identifier [] path;5 block [6,10,20,29];6 expression_statement [7];7 assignment [8,9];8 identifier [] scheme;9 string [] file;10 expression_statement [11];11 assignment [12,16];12 pattern_list [13,14,15];13 identifier [] param...
Returns a URI for the given filesystem path.
0 module [1];1 function_definition [2,3,11];2 function_name [] _inference_tip_cached;3 parameters [4,5,6,7,8];4 identifier [] func;5 identifier [] instance;6 identifier [] args;7 identifier [] kwargs;8 default_parameter [9,10];9 identifier [] _cache;10 dictionary [];11 block [12,18];12 expression_statement [13];13 assi...
Cache decorator used for inference tips
0 module [1];1 function_definition [2,3,6];2 function_name [] write;3 parameters [4,5];4 identifier [] self;5 identifier [] path;6 block [7];7 with_statement [8,18];8 with_clause [9];9 with_item [10];10 as_pattern [11,16];11 call [12,13];12 identifier [] open;13 argument_list [14,15];14 identifier [] path;15 string [] ...
Save the metadata as json
0 module [1];1 function_definition [2,3,7];2 function_name [] xgroup_destroy;3 parameters [4,5,6];4 identifier [] self;5 identifier [] stream;6 identifier [] group_name;7 block [8,20];8 expression_statement [9];9 assignment [10,11];10 identifier [] fut;11 call [12,15];12 attribute [13,14];13 identifier [] self;14 ident...
Delete a consumer group
0 module [1];1 function_definition [2,3,6];2 function_name [] raise_errors;3 parameters [4,5];4 identifier [] self;5 identifier [] response;6 block [7,13,21,25,43,57,103,111,119,149,165];7 expression_statement [8];8 assignment [9,10];9 identifier [] verb;10 attribute [11,12];11 identifier [] self;12 identifier [] debug...
The innermost part - report errors by exceptions
0 module [1];1 function_definition [2,3,15];2 function_name [] check;3 parameters [4,5,6,9,12];4 identifier [] self;5 identifier [] action;6 default_parameter [7,8];7 identifier [] page;8 None [];9 default_parameter [10,11];10 identifier [] lang;11 None [];12 default_parameter [13,14];13 identifier [] method;14 None []...
Return ``True`` if the current user has permission on the page.
0 module [1];1 function_definition [2,3,7];2 function_name [] _get_1f_sum_scans;3 parameters [4,5,6];4 identifier [] self;5 identifier [] d;6 identifier [] freq;7 block [8,17,31,69];8 expression_statement [9];9 assignment [10,11];10 identifier [] unique_freq;11 call [12,15];12 attribute [13,14];13 identifier [] np;14 i...
Sum counts in each frequency bin over 1f scans.
0 module [1];1 function_definition [2,3,5];2 function_name [] deserialize_subject_info;3 parameters [4];4 identifier [] subject_info_xml_path;5 block [6];6 try_statement [7,32];7 block [8];8 with_statement [9,18];9 with_clause [10];10 with_item [11];11 as_pattern [12,16];12 call [13,14];13 identifier [] open;14 argumen...
Deserialize a SubjectInfo XML file to a PyXB object.
0 module [1];1 function_definition [2,3,6];2 function_name [] remove_reaction;3 parameters [4,5];4 identifier [] self;5 identifier [] reaction;6 block [7,15,24,34,44];7 if_statement [8,13];8 comparison_operator [9,10] not in;9 identifier [] reaction;10 attribute [11,12];11 identifier [] self;12 identifier [] _reaction_...
Remove reaction from model
0 module [1];1 function_definition [2,3,5];2 function_name [] _contains_blinded_text;3 parameters [4];4 identifier [] stats_xml;5 block [6,15,23,37,54];6 expression_statement [7];7 assignment [8,9];8 identifier [] tree;9 call [10,13];10 attribute [11,12];11 identifier [] ET;12 identifier [] parse;13 argument_list [14];...
Heuristic to determine whether the treebank has blinded texts or not
0 module [1];1 function_definition [2,3,6];2 function_name [] window_size;3 parameters [4,5];4 identifier [] self;5 identifier [] value;6 block [7,51];7 if_statement [8,24,31];8 () [9];9 boolean_operator [10,21] and;10 boolean_operator [11,14] and;11 comparison_operator [12,13] >;12 identifier [] value;13 integer [] 4;...
Set private ``_window_size`` and reset ``_block_matcher``.
0 module [1];1 function_definition [2,3,10];2 function_name [] _create_plot;3 parameters [4,5,6,7];4 identifier [] tumor;5 identifier [] in_glob;6 identifier [] out_ext;7 default_parameter [8,9];8 identifier [] page;9 integer [] 1;10 block [11,20,36,47,58,85];11 expression_statement [12];12 assignment [13,14];13 identi...
Create an output plot for the given PDF in the images directory.
0 module [1];1 function_definition [2,3,6];2 function_name [] make_ns;3 parameters [4,5];4 identifier [] self;5 identifier [] ns;6 block [7];7 if_statement [8,11,34];8 attribute [9,10];9 identifier [] self;10 identifier [] namespace;11 block [12,16,25,32];12 expression_statement [13];13 assignment [14,15];14 identifier...
Returns the `lazily` created template namespace.
0 module [1];1 function_definition [2,3,5];2 function_name [] init_tag_processors;3 parameters [4];4 identifier [] self;5 block [6,12,24,36,48,60,72,84,96,108,120,132];6 expression_statement [7];7 assignment [8,9];8 identifier [] register;9 attribute [10,11];10 identifier [] self;11 identifier [] register_tag_processor...
Register the TagProcessors that are bundled with doxytag2zealdb.
0 module [1];1 function_definition [2,3,6];2 function_name [] copyFeatures;3 parameters [4,5];4 identifier [] self;5 identifier [] featureSource;6 block [7];7 if_statement [8,13];8 comparison_operator [9,10] in;9 identifier [] featureSource;10 attribute [11,12];11 identifier [] self;12 identifier [] sources;13 block [1...
Copy the features from this source
0 module [1];1 function_definition [2,3,10];2 function_name [] visit_GpxModel;3 parameters [4,5,6,8];4 identifier [] self;5 identifier [] gpx_model;6 list_splat_pattern [7];7 identifier [] args;8 dictionary_splat_pattern [9];9 identifier [] kwargs;10 block [11,17,35,53,58,63,68,73,78,83];11 expression_statement [12];12...
Render a GPXModel as a single JSON structure.
0 module [1];1 function_definition [2,3,5];2 function_name [] _get_cache_plus_key;3 parameters [4];4 identifier [] self;5 block [6,19];6 expression_statement [7];7 assignment [8,9];8 identifier [] key;9 call [10,11];10 identifier [] getattr;11 argument_list [12,13,14];12 identifier [] self;13 string [] _cache_key;14 ca...
Return a cache region plus key.
0 module [1];1 function_definition [2,3,15];2 function_name [] rexponweib;3 parameters [4,5,6,9,12];4 identifier [] alpha;5 identifier [] k;6 default_parameter [7,8];7 identifier [] loc;8 integer [] 0;9 default_parameter [10,11];10 identifier [] scale;11 integer [] 1;12 default_parameter [13,14];13 identifier [] size;1...
Random exponentiated Weibull variates.
0 module [1];1 function_definition [2,3,8];2 function_name [] export_to_dict;3 parameters [4,5,6,7];4 identifier [] session;5 identifier [] recursive;6 identifier [] back_references;7 identifier [] include_defaults;8 block [9,16,25,46,58,67,88,100,106,115,124];9 expression_statement [10];10 call [11,14];11 attribute [1...
Exports databases and druid clusters to a dictionary
0 module [1];1 function_definition [2,3,11];2 function_name [] someoneKnownSeen;3 parameters [4,5,8];4 identifier [] self;5 default_parameter [6,7];6 identifier [] home;7 None [];8 default_parameter [9,10];9 identifier [] camera;10 None [];11 block [12,42,70];12 try_statement [13,30];13 block [14];14 expression_stateme...
Return True if someone known has been seen
0 module [1];1 function_definition [2,3,6];2 function_name [] saveTopicPageDefinitionToFile;3 parameters [4,5];4 identifier [] self;5 identifier [] fname;6 block [7];7 expression_statement [8];8 call [9,19];9 attribute [10,18];10 call [11,12];11 identifier [] open;12 argument_list [13,14,15];13 identifier [] fname;14 s...
save the topic page definition to a file
0 module [1];1 function_definition [2,3,6];2 function_name [] remove_child;3 parameters [4,5];4 identifier [] self;5 identifier [] child;6 block [7,13,22];7 assert_statement [8];8 call [9,10];9 identifier [] isinstance;10 argument_list [11,12];11 identifier [] child;12 identifier [] Term;13 expression_statement [14];14...
Remove the term from this term's children.
0 module [1];1 function_definition [2,3,13];2 function_name [] send_config_set;3 parameters [4,5,8,11];4 identifier [] self;5 default_parameter [6,7];6 identifier [] config_commands;7 None [];8 default_parameter [9,10];9 identifier [] exit_config_mode;10 True [];11 dictionary_splat_pattern [12];12 identifier [] kwargs;...
IOS-XR requires you not exit from configuration mode.
0 module [1];1 function_definition [2,3,5];2 function_name [] _CheckDatabaseEncoding;3 parameters [4];4 identifier [] cursor;5 block [6,14];6 expression_statement [7];7 assignment [8,9];8 identifier [] cur_character_set;9 call [10,11];10 identifier [] _ReadVariable;11 argument_list [12,13];12 string [] character_set_da...
Enforces a sane UTF-8 encoding for the database.
0 module [1];1 function_definition [2,3,7];2 function_name [] _get_keys;3 parameters [4,5,6];4 identifier [] self;5 identifier [] read;6 identifier [] input_records;7 block [8];8 for_statement [9,10,16];9 identifier [] i;10 call [11,12];11 identifier [] range;12 argument_list [13];13 attribute [14,15];14 identifier [] ...
Generator that yields `KeyPress` objects from the input records.
0 module [1];1 function_definition [2,3,6];2 function_name [] _choose_float_dtype;3 parameters [4,5];4 identifier [] dtype;5 identifier [] has_offset;6 block [7,28,53];7 if_statement [8,23];8 boolean_operator [9,14] and;9 comparison_operator [10,13] <=;10 attribute [11,12];11 identifier [] dtype;12 identifier [] itemsi...
Return a float dtype that can losslessly represent `dtype` values.
0 module [1];1 function_definition [2,3,7];2 function_name [] generate_random_string;3 parameters [4];4 default_parameter [5,6];5 identifier [] length;6 integer [] 8;7 block [8,18];8 expression_statement [9];9 assignment [10,11];10 identifier [] char_set;11 binary_operator [12,15] +;12 attribute [13,14];13 identifier [...
Generate a random string
0 module [1];1 function_definition [2,3,6];2 function_name [] phrase_replace;3 parameters [4,5];4 identifier [] self;5 identifier [] replace_dict;6 block [7,57];7 function_definition [8,9,11];8 function_name [] r;9 parameters [10];10 identifier [] tokens;11 block [12,23,51];12 expression_statement [13];13 assignment [1...
Replace phrases with single token, mapping defined in replace_dict
0 module [1];1 function_definition [2,3,11];2 function_name [] parse_udiff;3 parameters [4,5,8];4 identifier [] diff;5 default_parameter [6,7];6 identifier [] patterns;7 None [];8 default_parameter [9,10];9 identifier [] parent;10 string [] .;11 block [12,16,22,149];12 expression_statement [13];13 assignment [14,15];14...
Return a dictionary of matching lines.
0 module [1];1 function_definition [2,3,5];2 function_name [] parse_string;3 parameters [4];4 identifier [] self;5 block [6,10,47,117];6 expression_statement [7];7 assignment [8,9];8 identifier [] word;9 string [];10 if_statement [11,14,27];11 attribute [12,13];12 identifier [] self;13 identifier [] prior_delim;14 bloc...
Tokenize a Fortran string.
0 module [1];1 function_definition [2,3,5];2 function_name [] exit_if_missing_graphviz;3 parameters [4];4 identifier [] self;5 block [6,17];6 expression_statement [7];7 assignment [8,11];8 tuple_pattern [9,10];9 identifier [] out;10 identifier [] err;11 call [12,15];12 attribute [13,14];13 identifier [] utils;14 identi...
Detect the presence of the dot utility to make a png graph.
0 module [1];1 function_definition [2,3,5];2 function_name [] hessian;3 parameters [4];4 identifier [] self;5 block [6,24,59];6 expression_statement [7];7 assignment [8,9];8 identifier [] result;9 call [10,13];10 attribute [11,12];11 identifier [] np;12 identifier [] zeros;13 argument_list [14,23];14 tuple [15,18,19,22...
Compute the hessian of the energy
0 module [1];1 function_definition [2,3,10];2 function_name [] extract_gzip;3 parameters [4,5,6,7,8,9];4 identifier [] archive;5 identifier [] compression;6 identifier [] cmd;7 identifier [] verbosity;8 identifier [] interactive;9 identifier [] outdir;10 block [11,21,98];11 expression_statement [12];12 assignment [13,1...
Extract a GZIP archive with the gzip Python module.
0 module [1];1 function_definition [2,3,8];2 function_name [] match_all;3 parameters [4,5];4 identifier [] d_SMEFT;5 default_parameter [6,7];6 identifier [] parameters;7 None [];8 block [9,17,29,42,48,56,70,79,92,101,119,131];9 expression_statement [10];10 assignment [11,12];11 identifier [] p;12 call [13,16];13 attrib...
Match the SMEFT Warsaw basis onto the WET JMS basis.
0 module [1];1 function_definition [2,3,8];2 function_name [] file_to_attachment;3 parameters [4,5];4 identifier [] filename;5 default_parameter [6,7];6 identifier [] filehandler;7 None [];8 block [9,29];9 if_statement [10,11];10 identifier [] filehandler;11 block [12];12 return_statement [13];13 dictionary [14,17];14 ...
Convert a file to attachment
0 module [1];1 function_definition [2,3,5];2 function_name [] print_statements;3 parameters [4];4 identifier [] self;5 block [6,13,35,42];6 expression_statement [7];7 call [8,11];8 attribute [9,10];9 identifier [] logger;10 identifier [] info;11 argument_list [12];12 string [] --- Direct INDRA statements ----------;13 ...
Print all extracted INDRA Statements.
0 module [1];1 function_definition [2,3,9];2 function_name [] unhandled_exception;3 parameters [4,5];4 identifier [] self;5 typed_parameter [6,7];6 identifier [] exception;7 type [8];8 identifier [] Exception;9 block [10,32,41];10 expression_statement [11];11 call [12,15];12 attribute [13,14];13 identifier [] log;14 id...
Flask.errorhandler when an exception wasn't correctly handled
0 module [1];1 function_definition [2,3,8];2 function_name [] countfiles;3 parameters [4,5];4 identifier [] path;5 default_parameter [6,7];6 identifier [] recurse;7 False [];8 block [9,20,24,48];9 if_statement [10,17];10 not_operator [11];11 call [12,15];12 attribute [13,14];13 identifier [] op;14 identifier [] isdir;1...
Returns the number of files under the given directory path.
0 module [1];1 function_definition [2,3,5];2 function_name [] _str_replace;3 parameters [4];4 identifier [] txt;5 block [6,16,26,36,46,56,66];6 expression_statement [7];7 assignment [8,9];8 identifier [] txt;9 call [10,13];10 attribute [11,12];11 identifier [] txt;12 identifier [] replace;13 argument_list [14,15];14 st...
Makes a small text amenable to being used in a filename.
0 module [1];1 function_definition [2,3,9];2 function_name [] _make_version;3 parameters [4,5,6,7,8];4 identifier [] major;5 identifier [] minor;6 identifier [] micro;7 identifier [] releaselevel;8 identifier [] serial;9 block [10,18,26,36,64];10 assert_statement [11];11 comparison_operator [12,13] in;12 identifier [] ...
Create a readable version string from version_info tuple components.
0 module [1];1 function_definition [2,3,12];2 function_name [] items2file;3 parameters [4,5,6,9];4 identifier [] items;5 identifier [] filename;6 default_parameter [7,8];7 identifier [] encoding;8 string [] utf-8;9 default_parameter [10,11];10 identifier [] modifier;11 string [] w;12 block [13];13 with_statement [14,29...
json array to file, canonical json format
0 module [1];1 function_definition [2,3,5];2 function_name [] calc_core_bytes;3 parameters [4];4 identifier [] self;5 block [6,55,64,70,74,100,104,163,184];6 if_statement [7,15,30];7 comparison_operator [8,14] ==;8 call [9,10];9 identifier [] len;10 argument_list [11];11 attribute [12,13];12 identifier [] self;13 ident...
Convert all used annotation fields into bytes to write
0 module [1];1 function_definition [2,3,6];2 function_name [] _tokenize_chinese_chars;3 parameters [4,5];4 identifier [] self;5 identifier [] text;6 block [7,11,60];7 expression_statement [8];8 assignment [9,10];9 identifier [] output;10 list [] [];11 for_statement [12,13,14];12 identifier [] char;13 identifier [] text...
Adds whitespace around any CJK character.
0 module [1];1 function_definition [2,3,6];2 function_name [] _has_y;3 parameters [4,5];4 identifier [] self;5 identifier [] kwargs;6 block [7];7 return_statement [8];8 () [9];9 boolean_operator [10,21] or;10 boolean_operator [11,15] or;11 () [12];12 comparison_operator [13,14] in;13 string [] y;14 identifier [] kwargs...
Returns True if y is explicitly defined in kwargs
0 module [1];1 function_definition [2,3,5];2 function_name [] check_rotation;3 parameters [4];4 identifier [] rotation;5 block [6];6 if_statement [7,10];7 comparison_operator [8,9] not in;8 identifier [] rotation;9 identifier [] ALLOWED_ROTATION;10 block [11,20];11 expression_statement [12];12 assignment [13,14];13 ide...
checks rotation parameter if illegal value raises exception
0 module [1];1 function_definition [2,3,7];2 function_name [] prune_hashes;3 parameters [4,5,6];4 identifier [] self;5 identifier [] hashes;6 identifier [] list_type;7 block [8,12,40];8 expression_statement [9];9 assignment [10,11];10 identifier [] discarded;11 list [] [];12 for_statement [13,14,15];13 identifier [] ha...
Prune any hashes not in source resource or change list.
0 module [1];1 function_definition [2,3,6];2 function_name [] add_task;3 parameters [4,5];4 identifier [] self;5 identifier [] pid;6 block [7,12];7 expression_statement [8];8 call [9,10];9 identifier [] _register_process_with_cgrulesengd;10 argument_list [11];11 identifier [] pid;12 for_statement [13,14,17];13 identifi...
Add a process to the cgroups represented by this instance.
0 module [1];1 function_definition [2,3,6];2 function_name [] answered_by;3 parameters [4,5];4 identifier [] self;5 identifier [] rec;6 block [7];7 return_statement [8];8 boolean_operator [9,32,33] and;9 boolean_operator [10,17,18] and;10 comparison_operator [11,14] ==;11 attribute [12,13];12 identifier [] self;13 iden...
Returns true if the question is answered by the record
0 module [1];1 function_definition [2,3,11,13];2 function_name [] visit_BoolOp;3 parameters [4,5];4 identifier [] self;5 typed_parameter [6,7];6 identifier [] node;7 type [8];8 attribute [9,10];9 identifier [] ast;10 identifier [] BoolOp;11 type [12];12 identifier [] Any;13 block [14,29,100,108];14 expression_statement...
Recursively visit the operands and apply the operation on them.
0 module [1];1 function_definition [2,3,9];2 function_name [] completer_tokenize;3 parameters [4,5,6];4 identifier [] cls;5 identifier [] value;6 default_parameter [7,8];7 identifier [] min_length;8 integer [] 3;9 block [10,48];10 expression_statement [11];11 assignment [12,13];12 identifier [] tokens;13 call [14,15];1...
Quick and dirty tokenizer for completion suggester
0 module [1];1 function_definition [2,3,5];2 function_name [] __generate_string;3 parameters [4];4 identifier [] length;5 block [6];6 return_statement [7];7 call [8,35];8 attribute [9,34];9 call [10,13];10 attribute [11,12];11 string [];12 identifier [] join;13 generator_expression [14,28];14 call [15,20];15 attribute ...
Generate a string for password creation.
0 module [1];1 function_definition [2,3,6];2 function_name [] validate_headers;3 parameters [4,5];4 identifier [] spec;5 identifier [] data;6 block [7,29,56,78,105];7 expression_statement [8];8 assignment [9,10];9 identifier [] validated_data;10 dictionary [11,20];11 pair [12,15];12 attribute [13,14];13 identifier [] s...
Validates headers data and creates the config objects
0 module [1];1 function_definition [2,3,5];2 function_name [] capture_heroku_database;3 parameters [4];4 identifier [] self;5 block [6,19,32,53];6 expression_statement [7];7 call [8,11];8 attribute [9,10];9 identifier [] self;10 identifier [] print_message;11 argument_list [12];12 binary_operator [13,14] %;13 string []...
Capture Heroku database backup.
0 module [1];1 function_definition [2,3,5];2 function_name [] _get_bottom_line_color;3 parameters [4];4 identifier [] self;5 block [6,18];6 expression_statement [7];7 assignment [8,9];8 identifier [] color;9 subscript [10,17];10 subscript [11,14];11 attribute [12,13];12 identifier [] self;13 identifier [] cell_attribut...
Returns color rgb tuple of bottom line
0 module [1];1 function_definition [2,3,6];2 function_name [] apply;3 parameters [4,5];4 identifier [] self;5 identifier [] matrix;6 block [7,17];7 expression_statement [8];8 assignment [9,10];9 identifier [] view;10 subscript [11,12];11 identifier [] matrix;12 call [13,16];13 attribute [14,15];14 identifier [] self;15...
Slices the supplied matrix and applies any transform bound to this window
0 module [1];1 function_definition [2,3,7];2 function_name [] average;3 parameters [4,5,6];4 identifier [] var;5 identifier [] key;6 identifier [] N;7 block [8,10,27,36,45];8 global_statement [9];9 identifier [] average_data;10 if_statement [11,15];11 not_operator [12];12 comparison_operator [13,14] in;13 identifier []...
average over N points
0 module [1];1 function_definition [2,3,5];2 function_name [] _load_root_directory;3 parameters [4];4 identifier [] self;5 block [6,15];6 expression_statement [7];7 assignment [8,9];8 identifier [] kwargs;9 call [10,13];10 attribute [11,12];11 identifier [] self;12 identifier [] _req_directory;13 argument_list [14];14 ...
Load root directory, which has a cid of 0
0 module [1];1 function_definition [2,3,5];2 function_name [] removeRnaQuantificationSet;3 parameters [4];4 identifier [] self;5 block [6,12,27,40,56];6 expression_statement [7];7 call [8,11];8 attribute [9,10];9 identifier [] self;10 identifier [] _openRepo;11 argument_list [];12 expression_statement [13];13 assignmen...
Removes an rnaQuantificationSet from this repo
0 module [1];1 function_definition [2,3,7];2 function_name [] image_data;3 parameters [4];4 default_parameter [5,6];5 identifier [] verbose;6 False [];7 block [8,10,53];8 global_statement [9];9 identifier [] _IMAGE_DATA;10 if_statement [11,14];11 comparison_operator [12,13] is;12 identifier [] _IMAGE_DATA;13 None [];14...
Get the raw encoded image data, downloading it if necessary.
0 module [1];1 function_definition [2,3,6];2 function_name [] StoreStat;3 parameters [4,5];4 identifier [] self;5 identifier [] responses;6 block [7,15,44,54];7 expression_statement [8];8 assignment [9,10];9 identifier [] index;10 subscript [11,14];11 attribute [12,13];12 identifier [] responses;13 identifier [] reques...
Stores stat entry in the flow's state.
0 module [1];1 function_definition [2,3,14];2 function_name [] _get_sqs_conn;3 parameters [4,5,8,11];4 identifier [] profile;5 default_parameter [6,7];6 identifier [] region;7 None [];8 default_parameter [9,10];9 identifier [] key;10 None [];11 default_parameter [12,13];12 identifier [] keyid;13 None [];14 block [15,74...
Get a boto connection to SQS.
0 module [1];1 function_definition [2,3,7];2 function_name [] end_logging;3 parameters [4];4 default_parameter [5,6];5 identifier [] filename;6 None [];7 block [8];8 if_statement [9,12,35];9 attribute [10,11];10 identifier [] logutil;11 identifier [] global_logging_started;12 block [13,29];13 if_statement [14,15,22];14...
Close log file and restore system defaults.
0 module [1];1 function_definition [2,3,6];2 function_name [] append;3 parameters [4,5];4 identifier [] self;5 identifier [] text;6 block [7,16,25,31];7 expression_statement [8];8 assignment [9,10];9 identifier [] cursor;10 call [11,12];11 identifier [] QTextCursor;12 argument_list [13];13 attribute [14,15];14 identifi...
Append line to the end
0 module [1];1 function_definition [2,3,5];2 function_name [] run;3 parameters [4];4 identifier [] self;5 block [6,24];6 expression_statement [7];7 assignment [8,9];8 identifier [] states;9 call [10,23];10 attribute [11,22];11 call [12,21];12 attribute [13,20];13 call [14,15];14 identifier [] open;15 argument_list [16,...
For each state in states file build url and download file
0 module [1];1 function_definition [2,3,5];2 function_name [] _remove_single_line_import_comments;3 parameters [4];4 identifier [] r;5 block [6,13,22,30,100];6 expression_statement [7];7 call [8,11];8 attribute [9,10];9 identifier [] logging;10 identifier [] info;11 argument_list [12];12 string [] Removing single line ...
We previously used more groups for the import statements and named each group.
0 module [1];1 function_definition [2,3,5];2 function_name [] field_adaptors;3 parameters [4];4 identifier [] self;5 block [6];6 with_statement [7,14];7 with_clause [8];8 with_item [9];9 call [10,11];10 identifier [] exception_logging;11 argument_list [12,13];12 identifier [] logger;13 string [] Exception in `field_ada...
Returns a tuple of Fields for captured fields which need additional treatment.
0 module [1];1 function_definition [2,3,21];2 function_name [] pubmed_url;3 parameters [4,13,16];4 default_parameter [5,6];5 identifier [] args;6 subscript [7,10];7 attribute [8,9];8 identifier [] sys;9 identifier [] argv;10 slice [11,12];11 integer [] 1;12 colon [];13 default_parameter [14,15];14 identifier [] resolve...
Get a publication URL via the command line using a PubMed ID or PubMed URL