code stringlengths 51 2.34k | sequence stringlengths 186 3.94k | docstring stringlengths 11 171 |
|---|---|---|
async def save_session(self, session: Session, response: Response) -> None:
await ensure_coroutine(self.session_interface.save_session)(self, session, response) | module function_definition identifier parameters identifier typed_parameter identifier type identifier typed_parameter identifier type identifier type none block expression_statement await call call identifier argument_list attribute attribute identifier identifier identifier argument_list identifier identifier identif... | Saves the session to the response. |
def _load(self, **kwargs):
if 'uri' in self._meta_data:
error = "There was an attempt to assign a new uri to this "\
"resource, the _meta_data['uri'] is %s and it should"\
" not be changed." % (self._meta_data['uri'])
raise URICreationCollision(err... | module function_definition identifier parameters identifier dictionary_splat_pattern identifier block if_statement comparison_operator string string_start string_content string_end attribute identifier identifier block expression_statement assignment identifier binary_operator concatenated_string string string_start st... | wrapped with load, override that in a subclass to customize |
def rlw_filter(name, location, size, unsize):
arch = _meta_.arch
if arch.startswith("i") and arch.endswith("86"):
arch = "i486"
(fname, flocation, fsize, funsize) = ([] for i in range(4))
for n, l, s, u in zip(name, location, size, unsize):
loc = l.split("/")
if arch == loc[-1]:
... | module function_definition identifier parameters identifier identifier identifier identifier block expression_statement assignment identifier attribute identifier identifier if_statement boolean_operator call attribute identifier identifier argument_list string string_start string_content string_end call attribute iden... | Filter rlw repository data |
def find_features(seqs, locus_tag="all", utr_len=200):
found_features = []
for seq_i in seqs:
for feature in seq_i.features:
if feature.type == "CDS" and (locus_tag == "all" or \
('locus_tag' in feature.qualifiers and \
feature.qualifiers['locus_tag'][... | module function_definition identifier parameters identifier default_parameter identifier string string_start string_content string_end default_parameter identifier integer block expression_statement assignment identifier list for_statement identifier identifier block for_statement identifier attribute identifier identi... | Find features in sequences by locus tag |
def validate(config):
with open(config) as fh:
data = utils.yaml_load(fh.read())
jsonschema.validate(data, CONFIG_SCHEMA) | module function_definition identifier parameters identifier block with_statement with_clause with_item as_pattern call identifier argument_list identifier as_pattern_target identifier block expression_statement assignment identifier call attribute identifier identifier argument_list call attribute identifier identifier... | Validate a configuration file. |
def ampliconclear(self):
for sample in self.metadata:
sample[self.analysistype].ampliconfile = os.path.join(
sample[self.analysistype].outputdir, '{sn}_amplicons.fa'.format(sn=sample.name))
try:
os.remove(sample[self.analysistype].ampliconfile)
... | module function_definition identifier parameters identifier block for_statement identifier attribute identifier identifier block expression_statement assignment attribute subscript identifier attribute identifier identifier identifier call attribute attribute identifier identifier identifier argument_list attribute sub... | Clear previously created amplicon files to prepare for the appending of data to fresh files |
def reinitialize():
from ozelot import client
from ozelot.orm.target import ORMTargetMarker
client = client.get_client()
base.Base.drop_all(client)
base.Base.create_all(client) | module function_definition identifier parameters block import_from_statement dotted_name identifier dotted_name identifier import_from_statement dotted_name identifier identifier identifier dotted_name identifier expression_statement assignment identifier call attribute identifier identifier argument_list expression_st... | Drop all tables for all models, then re-create them |
def safe_mult(a, b):
if isinstance(a, str) and isinstance(b, int) and len(a) * b > MAX_STR_LEN:
raise RuntimeError("String length exceeded, max string length is {}".format(MAX_STR_LEN))
return a * b | module function_definition identifier parameters identifier identifier block if_statement boolean_operator boolean_operator call identifier argument_list identifier identifier call identifier argument_list identifier identifier comparison_operator binary_operator call identifier argument_list identifier identifier iden... | safe version of multiply |
def calc_halfmax_points(self):
d = self._ensure_data()
return interpolated_halfmax_points(d.wlen, d.resp) | module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute identifier identifier argument_list return_statement call identifier argument_list attribute identifier identifier attribute identifier identifier | Calculate the wavelengths of the filter half-maximum values. |
def update_thresh(self):
thresh_val = self.threshLine.value()
self.threshold_field.setValue(thresh_val)
self.thresholdUpdated.emit(thresh_val, self.getTitle()) | module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list expression_statement call attribute attribute identifier identifier identifier argument_list identifier expression_statement call attribute... | Emits a Qt signal thresholdUpdated with the current threshold value |
def make_response(event):
code, message = event.status
response = jsonify(**event.response)
response.headers['X-Hub-Event'] = event.receiver_id
response.headers['X-Hub-Delivery'] = event.id
if message:
response.headers['X-Hub-Info'] = message
add_link_header(response, {'self': url_for(
... | module function_definition identifier parameters identifier block expression_statement assignment pattern_list identifier identifier attribute identifier identifier expression_statement assignment identifier call identifier argument_list dictionary_splat attribute identifier identifier expression_statement assignment s... | Make a response from webhook event. |
def _symlink_check(name, target, force, user, group, win_owner):
changes = {}
if not os.path.exists(name) and not __salt__['file.is_link'](name):
changes['new'] = name
return None, 'Symlink {0} to {1} is set for creation'.format(
name, target
), changes
if __salt__['file.... | module function_definition identifier parameters identifier identifier identifier identifier identifier identifier block expression_statement assignment identifier dictionary if_statement boolean_operator not_operator call attribute attribute identifier identifier identifier argument_list identifier not_operator call s... | Check the symlink function |
def _element_keywords(cls, backend, elements=None):
"Returns a dictionary of element names to allowed keywords"
if backend not in Store.loaded_backends():
return {}
mapping = {}
backend_options = Store.options(backend)
elements = elements if elements is not None else ... | module function_definition identifier parameters identifier identifier default_parameter identifier none block expression_statement string string_start string_content string_end if_statement comparison_operator identifier call attribute identifier identifier argument_list block return_statement dictionary expression_st... | Returns a dictionary of element names to allowed keywords |
def unlink(client, name, include, exclude, yes):
dataset = client.load_dataset(name=name)
records = _filter(
client, names=[dataset.name], include=include, exclude=exclude
)
if not yes and records:
prompt_text = (
'You are about to remove '
'following from "{0}" d... | module function_definition identifier parameters identifier identifier identifier identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list keyword_argument identifier identifier expression_statement assignment identifier call identifier argument_list iden... | Remove matching files from a dataset. |
def fetch(self, code, **kwargs):
log.debug('fetching QuanDL data (%s)' % code)
if 'authtoken' in kwargs:
self.quandl_key = kwargs.pop('authtoken')
if 'start' in kwargs:
kwargs['trim_start'] = kwargs.pop('start')
if 'end' in kwargs:
kwargs['trim_end'] =... | module function_definition identifier parameters identifier identifier dictionary_splat_pattern identifier block expression_statement call attribute identifier identifier argument_list binary_operator string string_start string_content string_end identifier if_statement comparison_operator string string_start string_co... | Quandl entry point in datafeed object |
def write_config(self):
if not os.path.exists(os.path.dirname(self.config_file)):
os.makedirs(os.path.dirname(self.config_file))
with open(self.config_file, 'w') as f:
f.write(json.dumps(self.config))
f.close() | module function_definition identifier parameters identifier block if_statement not_operator call attribute attribute identifier identifier identifier argument_list call attribute attribute identifier identifier identifier argument_list attribute identifier identifier block expression_statement call attribute identifier... | Write config to file |
def populate_countries(self):
for i in range(1, 12):
self.admin_level_comboBox.addItem(self.tr('Level %s') % i, i)
self.admin_level_comboBox.setCurrentIndex(7)
list_countries = sorted([
self.tr(country) for country in list(self.countries.keys())])
for country in l... | module function_definition identifier parameters identifier block for_statement identifier call identifier argument_list integer integer block expression_statement call attribute attribute identifier identifier identifier argument_list binary_operator call attribute identifier identifier argument_list string string_sta... | Populate the combobox about countries and levels. |
def echo_detected_environment(env_name, env_vars):
env_override_name = 'DEPLOY_ENVIRONMENT'
LOGGER.info("")
if env_override_name in env_vars:
LOGGER.info("Environment \"%s\" was determined from the %s environment variable.",
env_name,
env_override_name)
... | module function_definition identifier parameters identifier identifier block expression_statement assignment identifier string string_start string_content string_end expression_statement call attribute identifier identifier argument_list string string_start string_end if_statement comparison_operator identifier identif... | Print a helper note about how the environment was determined. |
def _default_request_kwargs(self):
defaults = copy.deepcopy(super(Acls, self)._default_request_kwargs)
defaults.setdefault('headers', {}).update({
'X-Auth-Token': self._client.auth._token
})
return defaults | module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute identifier identifier argument_list attribute call identifier argument_list identifier identifier identifier expression_statement call attribute call attribute identifier identifier argument_list ... | The default request keyword arguments to be passed to the requests library. |
def showall(self):
p = _runshell([brctlexe, 'show'],
"Could not show bridges.")
wlist = map(str.split, p.stdout.read().splitlines()[1:])
brwlist = filter(lambda x: len(x) != 1, wlist)
brlist = map(lambda x: x[0], brwlist)
return map(Bridge, brlist) | module function_definition identifier parameters identifier block expression_statement assignment identifier call identifier argument_list list identifier string string_start string_content string_end string string_start string_content string_end expression_statement assignment identifier call identifier argument_list ... | Return a list of all available bridges. |
def build_kal_scan_band_string(kal_bin, band, args):
option_mapping = {"gain": "-g",
"device": "-d",
"error": "-e"}
if not sanity.scan_band_is_valid(band):
err_txt = "Unsupported band designation: %" % band
raise ValueError(err_txt)
base_string = "... | module function_definition identifier parameters identifier identifier identifier block expression_statement assignment identifier dictionary pair string string_start string_content string_end string string_start string_content string_end pair string string_start string_content string_end string string_start string_con... | Return string for CLI invocation of kal, for band scan. |
def markCurrentChanged(self):
view = self.currentView()
if view:
view.setCurrent()
self.setFocus()
view.setFocus()
self._hintLabel.hide()
else:
self._hintLabel.show()
self._hintLabel.setText(self.hint())
if not self.... | module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute identifier identifier argument_list if_statement identifier block expression_statement call attribute identifier identifier argument_list expression_statement call attribute identifier identifier ... | Marks that the current widget has changed. |
def controlled(self, control_qubit):
control_qubit = unpack_qubit(control_qubit)
self.modifiers.insert(0, "CONTROLLED")
self.qubits.insert(0, control_qubit)
return self | module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call identifier argument_list identifier expression_statement call attribute attribute identifier identifier identifier argument_list integer string string_start string_content string_end expression_s... | Add the CONTROLLED modifier to the gate with the given control qubit. |
def _get_date_pagination(self, base, oldest_neighbor, newest_neighbor):
_, span, date_format = utils.parse_date(self.spec['date'])
if newest_neighbor:
newer_date = newest_neighbor.date.span(span)[0]
newer_view = View({**base,
'order': self._order_by... | module function_definition identifier parameters identifier identifier identifier identifier block expression_statement assignment pattern_list identifier identifier identifier call attribute identifier identifier argument_list subscript attribute identifier identifier string string_start string_content string_end if_s... | Compute the pagination for date-based views |
def _update_Frxy(self):
self.Frxy.fill(1.0)
self.Frxy_no_omega.fill(1.0)
with scipy.errstate(divide='raise', under='raise', over='raise',
invalid='ignore'):
scipy.copyto(self.Frxy_no_omega, -self.ln_piAx_piAy_beta
/ (1 - self.piAx_piAy_beta), where... | module function_definition identifier parameters identifier block expression_statement call attribute attribute identifier identifier identifier argument_list float expression_statement call attribute attribute identifier identifier identifier argument_list float with_statement with_clause with_item call attribute iden... | Update `Frxy` from `piAx_piAy_beta`, `omega`, `omega2`, and `beta`. |
def compare_words_lexicographic( word_a, word_b ):
if ( not all_tamil(word_a) ) or (not all_tamil(word_b)) :
pass
La = len(word_a)
Lb = len(word_b)
all_TA_letters = u"".join(tamil_letters)
for itr in range(0,min(La,Lb)):
pos1 = all_TA_letters.find( word_a[itr] )
pos2 ... | module function_definition identifier parameters identifier identifier block if_statement boolean_operator parenthesized_expression not_operator call identifier argument_list identifier parenthesized_expression not_operator call identifier argument_list identifier block pass_statement expression_statement assignment id... | compare words in Tamil lexicographic order |
def can_use_enum(func):
@wraps(func)
def inner(self, value):
if isinstance(value, Enum):
return self.check_value(value.value) or func(self, value.value)
return func(self, value)
return inner | module function_definition identifier parameters identifier block decorated_definition decorator call identifier argument_list identifier function_definition identifier parameters identifier identifier block if_statement call identifier argument_list identifier identifier block return_statement boolean_operator call at... | Decorator to use Enum value on type checks. |
def upsert(self, table: str, record: dict, create_cols: bool=False,
dtypes: list=None, pks=["id"], namefields=["id"]):
try:
self.db[table].upsert(record, pks, create_cols, dtypes)
except Exception as e:
self.err(e, "Can not upsert data")
return
... | module function_definition identifier parameters identifier typed_parameter identifier type identifier typed_parameter identifier type identifier typed_default_parameter identifier type identifier false typed_default_parameter identifier type identifier none default_parameter identifier list string string_start string_... | Upsert a record in a table |
def _get_next_version(self, revisions):
versions = [0]
for v in revisions:
if v.isdigit():
versions.append(int(v))
return six.text_type(sorted(versions)[-1] + 1) | module function_definition identifier parameters identifier identifier block expression_statement assignment identifier list integer for_statement identifier identifier block if_statement call attribute identifier identifier argument_list block expression_statement call attribute identifier identifier argument_list cal... | Calculates new version number based on existing numeric ones. |
def add_candidate(self, artifact):
self.candidates.append(artifact)
self._log(logging.DEBUG, "CANDIDATES appended:'{}'"
.format(artifact)) | module function_definition identifier parameters identifier identifier block expression_statement call attribute attribute identifier identifier identifier argument_list identifier expression_statement call attribute identifier identifier argument_list attribute identifier identifier call attribute string string_start ... | Add candidate artifact to the list of current candidates. |
def check_signing_key(self):
user_keys = self.gpg.list_keys()
if len(user_keys) > 0:
trusted = False
for key in user_keys:
if key['fingerprint'] == self.key_info['fingerprint']:
trusted = True
logger.debug(("repo signing key... | module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list if_statement comparison_operator call identifier argument_list identifier integer block expression_statement assignment identifier false fo... | Check that repo signing key is trusted by gpg keychain |
def pearson_correlation(self):
x, y, dt = self.data
X, Y = np.array(x), np.array(y)
X -= X.mean(0)
Y -= Y.mean(0)
X /= X.std(0)
Y /= Y.std(0)
return (np.mean(X*Y) ** 2) * 100 | module function_definition identifier parameters identifier block expression_statement assignment pattern_list identifier identifier identifier attribute identifier identifier expression_statement assignment pattern_list identifier identifier expression_list call attribute identifier identifier argument_list identifier... | Compute Pearson Correlation Coefficient. |
def onAuthenticate(self, signature, extra):
log.msg("onAuthenticate: {} {}".format(signature, extra))
if self._pending_auth:
if signature == self._pending_auth.signature:
return types.Accept(authid = self._pending_auth.uid,
authrole = self._pending_auth.au... | module function_definition identifier parameters identifier identifier identifier block expression_statement call attribute identifier identifier argument_list call attribute string string_start string_content string_end identifier argument_list identifier identifier if_statement attribute identifier identifier block i... | Callback fired when a client responds to an authentication challenge. |
def render(self, *args, **kwargs):
output = super(HeavySelect2Mixin, self).render(*args, **kwargs)
self.set_to_cache()
return output | module function_definition identifier parameters identifier list_splat_pattern identifier dictionary_splat_pattern identifier block expression_statement assignment identifier call attribute call identifier argument_list identifier identifier identifier argument_list list_splat identifier dictionary_splat identifier exp... | Render widget and register it in Django's cache. |
def _post_init(self):
if WIN:
self._find_devices_win()
elif MAC:
self._find_devices_mac()
else:
self._find_devices()
self._update_all_devices()
if NIX:
self._find_leds() | module function_definition identifier parameters identifier block if_statement identifier block expression_statement call attribute identifier identifier argument_list elif_clause identifier block expression_statement call attribute identifier identifier argument_list else_clause block expression_statement call attribu... | Call the find devices method for the relevant platform. |
def _bse_cli_get_versions(args):
name = args.basis.lower()
metadata = api.get_metadata(args.data_dir)
if not name in metadata:
raise KeyError(
"Basis set {} does not exist. For a complete list of basis sets, use the 'list-basis-sets' command".format(
name))
version_da... | module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list expression_statement assignment identifier call attribute identifier identifier argument_list attribute identifier identifier if_statement ... | Handles the get-versions subcommand |
def close(self):
if self.connection is not None:
self.connection.close()
if self.connection_fd is not None:
self.connection_fd.close() | module function_definition identifier parameters identifier block if_statement comparison_operator attribute identifier identifier none block expression_statement call attribute attribute identifier identifier identifier argument_list if_statement comparison_operator attribute identifier identifier none block expressio... | Quit the connection with mod-host |
def lonlat2xyz(lon, lat):
lat = xu.deg2rad(lat)
lon = xu.deg2rad(lon)
x = xu.cos(lat) * xu.cos(lon)
y = xu.cos(lat) * xu.sin(lon)
z = xu.sin(lat)
return x, y, z | module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list identifier expression_statement assignment identifier call attribute identifier identifier argument_list identifier expression_statement assignment i... | Convert lon lat to cartesian. |
def tonativefunc(enc='utf-8'):
if sys.version_info >= (3,0,0):
return lambda x: x.decode(enc) if isinstance(x, bytes) else str(x)
return lambda x: x.encode(enc) if isinstance(x, unicode) else str(x) | module function_definition identifier parameters default_parameter identifier string string_start string_content string_end block if_statement comparison_operator attribute identifier identifier tuple integer integer integer block return_statement lambda lambda_parameters identifier conditional_expression call attribut... | Returns a function that turns everything into 'native' strings using enc |
def comparelist_view(self, request, object_id, extra_context=None):
opts = self.model._meta
object_id = unquote(object_id)
current = get_object_or_404(self.model, pk=object_id)
action_list = [
{
"revision": version.revision,
"url": reverse("%s:... | module function_definition identifier parameters identifier identifier identifier default_parameter identifier none block expression_statement assignment identifier attribute attribute identifier identifier identifier expression_statement assignment identifier call identifier argument_list identifier expression_stateme... | Allow selecting versions to compare. |
def create_geoms(self, gdefs, plot):
new_gdefs = []
for gdef in gdefs:
gdef = gdef.create_geoms(plot)
if gdef:
new_gdefs.append(gdef)
return new_gdefs | module function_definition identifier parameters identifier identifier identifier block expression_statement assignment identifier list for_statement identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list identifier if_statement identifier block express... | Add geoms to the guide definitions |
def __clear_references(self, request, remove_request=True):
if remove_request:
with self.__requests:
self.__requests.pop(request.id_)
if not request.success:
with self.__pending_subs:
self.__pending_subs.pop(request.id_, None)
with self... | module function_definition identifier parameters identifier identifier default_parameter identifier true block if_statement identifier block with_statement with_clause with_item attribute identifier identifier block expression_statement call attribute attribute identifier identifier identifier argument_list attribute i... | Remove any internal references to the given request |
def getNbVariants(self, x1, x2 = -1) :
if x2 == -1 :
xx2 = len(self.defaultSequence)
else :
xx2 = x2
nbP = 1
for p in self.polymorphisms:
if x1 <= p[0] and p[0] <= xx2 :
nbP *= len(p[1])
return nbP | module function_definition identifier parameters identifier identifier default_parameter identifier unary_operator integer block if_statement comparison_operator identifier unary_operator integer block expression_statement assignment identifier call identifier argument_list attribute identifier identifier else_clause b... | returns the nb of variants of sequences between x1 and x2 |
def zunionstore(self, destkey, key, *keys,
with_weights=False, aggregate=None):
keys = (key,) + keys
numkeys = len(keys)
args = []
if with_weights:
assert all(isinstance(val, (list, tuple)) for val in keys), (
"All key arguments must be (ke... | module function_definition identifier parameters identifier identifier identifier list_splat_pattern identifier default_parameter identifier false default_parameter identifier none block expression_statement assignment identifier binary_operator tuple identifier identifier expression_statement assignment identifier cal... | Add multiple sorted sets and store result in a new key. |
def apply(self, q, bindings, drilldowns):
info = []
for drilldown in self.parse(drilldowns):
for attribute in self.cube.model.match(drilldown):
info.append(attribute.ref)
table, column = attribute.bind(self.cube)
bindings.append(Binding(table, ... | module function_definition identifier parameters identifier identifier identifier identifier block expression_statement assignment identifier list for_statement identifier call attribute identifier identifier argument_list identifier block for_statement identifier call attribute attribute attribute identifier identifie... | Apply a set of grouping criteria and project them. |
def activate_boost_by_name(self,
zone_name,
target_temperature,
num_hours=1):
zone = self.get_zone(zone_name)
if zone is None:
raise RuntimeError("Unknown zone")
return self.activate_boost_by... | module function_definition identifier parameters identifier identifier identifier default_parameter identifier integer block expression_statement assignment identifier call attribute identifier identifier argument_list identifier if_statement comparison_operator identifier none block raise_statement call identifier arg... | Activate boost by the name of the zone |
def exists(provider, config_location=DEFAULT_CONFIG_DIR):
config_dir = os.path.join(config_location, NOIPY_CONFIG)
auth_file = os.path.join(config_dir, provider)
return os.path.exists(auth_file) | module function_definition identifier parameters identifier default_parameter identifier identifier block expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list identifier identifier expression_statement assignment identifier call attribute attribute identifie... | Check whether provider info is already stored |
def pbar_strings(files, desc='', **kwargs):
return tqdm(
sorted(files, key=lambda s: s.lower()),
desc=('<' + str(datetime.now().strftime("%Y-%m-%d %H:%M:%S")) + '> ' +
desc),
dynamic_ncols=True,
**kwargs) | module function_definition identifier parameters identifier default_parameter identifier string string_start string_end dictionary_splat_pattern identifier block return_statement call identifier argument_list call identifier argument_list identifier keyword_argument identifier lambda lambda_parameters identifier call a... | Wrapper for `tqdm` progress bar which also sorts list of strings |
def _sanitize_params(prefix, suffix, dir):
output_type = _infer_return_type(prefix, suffix, dir)
if suffix is None:
suffix = output_type()
if prefix is None:
if output_type is str:
prefix = "tmp"
else:
prefix = os.fsencode("tmp")
if dir is None:
if... | module function_definition identifier parameters identifier identifier identifier block expression_statement assignment identifier call identifier argument_list identifier identifier identifier if_statement comparison_operator identifier none block expression_statement assignment identifier call identifier argument_lis... | Common parameter processing for most APIs in this module. |
def dynamic_info(self):
"Return a map that for a given year will return the correct Info"
if self.key_name:
dyn_key = self.get_key().subkey('Dynamic DST')
del dyn_key['FirstEntry']
del dyn_key['LastEntry']
years = map(int, dyn_key.keys())
values = map(Info, dyn_key.values())
return RangeMap(zip(ye... | module function_definition identifier parameters identifier block expression_statement string string_start string_content string_end if_statement attribute identifier identifier block expression_statement assignment identifier call attribute call attribute identifier identifier argument_list identifier argument_list st... | Return a map that for a given year will return the correct Info |
def getreadergroups(self):
innerreadergroups.getreadergroups(self)
hresult, hcontext = SCardEstablishContext(SCARD_SCOPE_USER)
if hresult != 0:
raise EstablishContextException(hresult)
hresult, readers = SCardListReaderGroups(hcontext)
if hresult != 0:
rai... | module function_definition identifier parameters identifier block expression_statement call attribute identifier identifier argument_list identifier expression_statement assignment pattern_list identifier identifier call identifier argument_list identifier if_statement comparison_operator identifier integer block raise... | Returns the list of smartcard reader groups. |
def checkout_default_branch(self):
set_state(WORKFLOW_STATES.CHECKING_OUT_DEFAULT_BRANCH)
cmd = "git", "checkout", self.config["default_branch"]
self.run_cmd(cmd)
set_state(WORKFLOW_STATES.CHECKED_OUT_DEFAULT_BRANCH) | module function_definition identifier parameters identifier block expression_statement call identifier argument_list attribute identifier identifier expression_statement assignment identifier expression_list string string_start string_content string_end string string_start string_content string_end subscript attribute ... | git checkout default branch |
def reset(self):
self.minimum = None
self.maximum = None
self.start_time = None
self.idx_current = None
self.idx_markers = []
self.idx_annot = []
if self.scene is not None:
self.scene.clear()
self.scene = None | module function_definition identifier parameters identifier block expression_statement assignment attribute identifier identifier none expression_statement assignment attribute identifier identifier none expression_statement assignment attribute identifier identifier none expression_statement assignment attribute ident... | Reset the widget, and clear the scene. |
def draw_no_data(self):
no_data = self.node(
self.graph.nodes['text_overlay'],
'text',
x=self.graph.view.width / 2,
y=self.graph.view.height / 2,
class_='no_data'
)
no_data.text = self.graph.no_data_text | module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute identifier identifier argument_list subscript attribute attribute identifier identifier identifier string string_start string_content string_end string string_start string_content string_end keywo... | Write the no data text to the svg |
def new_stack(self,
keep_stacks: int,
new_traffic: int,
senza_yaml: dict,
stack_version: str,
disable_rollback: bool,
parameters: List[str],
region: Optional[str],
dry_run: boo... | module function_definition identifier parameters identifier typed_parameter identifier type identifier typed_parameter identifier type identifier typed_parameter identifier type identifier typed_parameter identifier type identifier typed_parameter identifier type identifier typed_parameter identifier type generic_type ... | Requests a new stack. |
def trim(self):
overlay_data_offset = self.get_overlay_data_start_offset()
if overlay_data_offset is not None:
return self.__data__[ : overlay_data_offset ]
return self.__data__[:] | module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute identifier identifier argument_list if_statement comparison_operator identifier none block return_statement subscript attribute identifier identifier slice identifier return_statement subscript at... | Return the just data defined by the PE headers, removing any overlayed data. |
def discover_slaves(self, service_name):
"Returns a list of alive slaves for service ``service_name``"
for sentinel in self.sentinels:
try:
slaves = sentinel.sentinel_slaves(service_name)
except (ConnectionError, ResponseError, TimeoutError):
conti... | module function_definition identifier parameters identifier identifier block expression_statement string string_start string_content string_end for_statement identifier attribute identifier identifier block try_statement block expression_statement assignment identifier call attribute identifier identifier argument_list... | Returns a list of alive slaves for service ``service_name`` |
def gen(skipdirhtml=False):
docs_changelog = 'docs/changelog.rst'
check_git_unchanged(docs_changelog)
pandoc('--from=markdown', '--to=rst', '--output=' + docs_changelog, 'CHANGELOG.md')
if not skipdirhtml:
sphinx_build['-b', 'dirhtml', '-W', '-E', 'docs', 'docs/_build/dirhtml'] & FG
sphinx_b... | module function_definition identifier parameters default_parameter identifier false block expression_statement assignment identifier string string_start string_content string_end expression_statement call identifier argument_list identifier expression_statement call identifier argument_list string string_start string_c... | Generate html and dirhtml output. |
def _check_equals(self):
card_string = self['card_string']
if len(card_string) < 9:
self._has_equals = False
elif card_string[8] == '=':
self._has_equals = True
else:
self._has_equals = False | module function_definition identifier parameters identifier block expression_statement assignment identifier subscript identifier string string_start string_content string_end if_statement comparison_operator call identifier argument_list identifier integer block expression_statement assignment attribute identifier ide... | check for = in position 8, set attribute _has_equals |
def _inherited_panel(panel, base_panels_from_pillar, ret):
base_panels = []
for base_panel_from_pillar in base_panels_from_pillar:
base_panel = __salt__['pillar.get'](base_panel_from_pillar)
if base_panel:
base_panels.append(base_panel)
elif base_panel_from_pillar != _DEFAULT... | module function_definition identifier parameters identifier identifier identifier block expression_statement assignment identifier list for_statement identifier identifier block expression_statement assignment identifier call subscript identifier string string_start string_content string_end argument_list identifier if... | Return a panel with properties from parents. |
def get(self, path, params, **options):
return self.request('get', path, params=params, **options) | module function_definition identifier parameters identifier identifier identifier dictionary_splat_pattern identifier block return_statement call attribute identifier identifier argument_list string string_start string_content string_end identifier keyword_argument identifier identifier dictionary_splat identifier | Parses GET request options and dispatches a request |
def approve(self, request, *args, **kwargs):
self.object = self.get_object()
success_url = self.get_success_url()
self.object.approved = True
self.object.save()
messages.success(self.request, self.success_message)
return HttpResponseRedirect(success_url) | module function_definition identifier parameters identifier identifier list_splat_pattern identifier dictionary_splat_pattern identifier block expression_statement assignment attribute identifier identifier call attribute identifier identifier argument_list expression_statement assignment identifier call attribute iden... | Approves the considered post and retirects the user to the success URL. |
def _create_buffer_control(self, editor_buffer):
@Condition
def preview_search():
return self.editor.incsearch
input_processors = [
ConditionalProcessor(
ShowTrailingWhiteSpaceProcessor(),
Condition(lambda: self.editor.display_unprintable_c... | module function_definition identifier parameters identifier identifier block decorated_definition decorator identifier function_definition identifier parameters block return_statement attribute attribute identifier identifier identifier expression_statement assignment identifier list call identifier argument_list call ... | Create a new BufferControl for a given location. |
def chunk_on(pipeline, new_chunk_signal, output_type=tuple):
assert iterable(pipeline), 'chunks needs pipeline to be iterable'
assert callable(new_chunk_signal), 'chunks needs new_chunk_signal to be callable'
assert callable(output_type), 'chunks needs output_type to be callable'
out = deque()
for i... | module function_definition identifier parameters identifier identifier default_parameter identifier identifier block assert_statement call identifier argument_list identifier string string_start string_content string_end assert_statement call identifier argument_list identifier string string_start string_content string... | split the stream into seperate chunks based on a new chunk signal |
def attached_to_model(self):
try:
if not bool(self.model):
return False
except AttributeError:
return False
else:
try:
return not bool(self.instance)
except AttributeError:
return True | module function_definition identifier parameters identifier block try_statement block if_statement not_operator call identifier argument_list attribute identifier identifier block return_statement false except_clause identifier block return_statement false else_clause block try_statement block return_statement not_oper... | Tells if the current index is the one attached to the model field, not instance field |
def default():
algorithm = algorithms.PPO
num_agents = 30
eval_episodes = 30
use_gpu = False
normalize_ranges = True
network = networks.feed_forward_gaussian
weight_summaries = dict(
all=r'.*', policy=r'.*/policy/.*', value=r'.*/value/.*')
policy_layers = 200, 100
value_layers = 200, 100
init_... | module function_definition identifier parameters block expression_statement assignment identifier attribute identifier identifier expression_statement assignment identifier integer expression_statement assignment identifier integer expression_statement assignment identifier false expression_statement assignment identif... | Default configuration for PPO. |
def _process_filter_block(query_metadata_table, block):
base_predicate = block.predicate
ternary_conditionals = []
problematic_locations = []
def find_ternary_conditionals(expression):
if isinstance(expression, TernaryConditional):
ternary_conditionals.append(expression)
retu... | module function_definition identifier parameters identifier identifier block expression_statement assignment identifier attribute identifier identifier expression_statement assignment identifier list expression_statement assignment identifier list function_definition identifier parameters identifier block if_statement ... | Rewrite the provided Filter block if necessary. |
def camel_to_snake(camel_str):
s1 = re.sub('(.)([A-Z][a-z]+)', r'\1_\2', camel_str)
return re.sub('([a-z0-9])([A-Z])', r'\1_\2', s1).lower() | module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute identifier identifier argument_list string string_start string_content string_end string string_start string_content string_end identifier return_statement call attribute call attribute identifier... | Convert `camel_str` from camelCase to snake_case |
def _track_class(cls, fields):
assert not getattr(cls, '_is_tracked', False)
for field in fields:
_track_class_field(cls, field)
_add_signals_to_cls(cls)
cls._is_tracked = True
cls._tracked_fields = [
field for field in fields
if '__' not in field
] | module function_definition identifier parameters identifier identifier block assert_statement not_operator call identifier argument_list identifier string string_start string_content string_end false for_statement identifier identifier block expression_statement call identifier argument_list identifier identifier expre... | Track fields on the specified model |
def events(self, argv):
opts = cmdline(argv, FLAGS_EVENTS)
self.foreach(opts.args, lambda job:
output(job.events(**opts.kwargs))) | module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call identifier argument_list identifier identifier expression_statement call attribute identifier identifier argument_list attribute identifier identifier lambda lambda_parameters identifier call ide... | Retrieve events for the specified search jobs. |
def _get_auth_header(self):
realm = 'realm="{realm}"'.format(realm=self.realm)
params = ['{k}="{v}"'.format(k=k, v=quote(str(v), safe=''))
for k, v in self.oauth_params.items()]
return 'OAuth ' + ','.join([realm] + params) | module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute string string_start string_content string_end identifier argument_list keyword_argument identifier attribute identifier identifier expression_statement assignment identifier list_comprehension cal... | Constructs and returns an authentication header. |
def _list_model(self, model_cls: Type[X]) -> List[X]:
return self.session.query(model_cls).all() | module function_definition identifier parameters identifier typed_parameter identifier type generic_type identifier type_parameter type identifier type generic_type identifier type_parameter type identifier block return_statement call attribute call attribute attribute identifier identifier identifier argument_list ide... | List the models in this class. |
def abort_job(self, job_id):
doc = self.create_abort_job_doc()
url = self.endpoint + "/job/%s" % job_id
resp = requests.post(
url,
headers=self.headers(),
data=doc
)
self.check_status(resp) | module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list expression_statement assignment identifier binary_operator attribute identifier identifier binary_operator string string_start string_content string_... | Abort a given bulk job |
def showContextMenu(self, pos):
contextMenu = QtWidgets.QMenu()
addInspectorActionsToMenu(contextMenu, self.execInspectorDialogAction,
self.inspectorActionGroup)
contextMenu.exec_(self.mapToGlobal(pos)) | module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list expression_statement call identifier argument_list identifier attribute identifier identifier attribute identifier identifier expression_statement ca... | Shows the context menu at position pos. |
def GenerateNetworkedConfigFile(load_hook, normal_class_load_hook, normal_class_dump_hook, **kwargs) -> NetworkedConfigObject:
def NetworkedConfigObjectGenerator(url, safe_load: bool=True):
cfg = NetworkedConfigObject(url=url, load_hook=load_hook, safe_load=safe_load,
nor... | module function_definition identifier parameters identifier identifier identifier dictionary_splat_pattern identifier type identifier block function_definition identifier parameters identifier typed_default_parameter identifier type identifier true block expression_statement assignment identifier call identifier argume... | Generates a NetworkedConfigObject using the specified hooks. |
def _check_unpack_options(extensions, function, extra_args):
existing_extensions = {}
for name, info in _UNPACK_FORMATS.items():
for ext in info[0]:
existing_extensions[ext] = name
for extension in extensions:
if extension in existing_extensions:
msg = '%s is already ... | module function_definition identifier parameters identifier identifier identifier block expression_statement assignment identifier dictionary for_statement pattern_list identifier identifier call attribute identifier identifier argument_list block for_statement identifier subscript identifier integer block expression_s... | Checks what gets registered as an unpacker. |
def _list_patient_ids(self):
results = []
for patient in self:
results.append(patient.id)
return(results) | module function_definition identifier parameters identifier block expression_statement assignment identifier list for_statement identifier identifier block expression_statement call attribute identifier identifier argument_list attribute identifier identifier return_statement parenthesized_expression identifier | Utility function to return a list of patient ids in the Cohort |
def to_tgt(self):
enc_part = EncryptedData({'etype': 1, 'cipher': b''})
tgt_rep = {}
tgt_rep['pvno'] = krb5_pvno
tgt_rep['msg-type'] = MESSAGE_TYPE.KRB_AS_REP.value
tgt_rep['crealm'] = self.server.realm.to_string()
tgt_rep['cname'] = self.client.to_asn1()[0]
tgt_rep['ticket'] = Ticket.load(self.ticket.to_... | module function_definition identifier parameters identifier block expression_statement assignment identifier call identifier argument_list dictionary pair string string_start string_content string_end integer pair string string_start string_content string_end string string_start string_end expression_statement assignme... | Returns the native format of an AS_REP message and the sessionkey in EncryptionKey native format |
def force_disconnect_url(self, session_id, connection_id):
url = (
self.api_url + '/v2/project/' + self.api_key + '/session/' +
session_id + '/connection/' + connection_id
)
return url | module function_definition identifier parameters identifier identifier identifier block expression_statement assignment identifier parenthesized_expression binary_operator binary_operator binary_operator binary_operator binary_operator binary_operator attribute identifier identifier string string_start string_content s... | this method returns the force disconnect url endpoint |
def _is_writable(self):
topology = self._get_topology()
try:
svr = topology.select_server(writable_server_selector)
return svr.description.is_writable
except ConnectionFailure:
return False | module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute identifier identifier argument_list try_statement block expression_statement assignment identifier call attribute identifier identifier argument_list identifier return_statement attribute attribut... | Attempt to connect to a writable server, or return False. |
def prettyprint(self):
return json.dumps(self.asJSON(), sort_keys=True, indent=4, separators=(',', ': ')) | module function_definition identifier parameters identifier block return_statement call attribute identifier identifier argument_list call attribute identifier identifier argument_list keyword_argument identifier true keyword_argument identifier integer keyword_argument identifier tuple string string_start string_conte... | Return hypercat formatted prettily |
def flush(self):
for key in self.grouping_info.keys():
if self._should_flush(key):
self._write_current_buffer_for_group_key(key) | module function_definition identifier parameters identifier block for_statement identifier call attribute attribute identifier identifier identifier argument_list block if_statement call attribute identifier identifier argument_list identifier block expression_statement call attribute identifier identifier argument_lis... | Ensure all remaining buffers are written. |
def arcball_nearest_axis(point, axes):
point = np.array(point, dtype=np.float64, copy=False)
nearest = None
mx = -1.0
for axis in axes:
t = np.dot(arcball_constrain_to_axis(point, axis), point)
if t > mx:
nearest = axis
mx = t
return nearest | module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list identifier keyword_argument identifier attribute identifier identifier keyword_argument identifier false expression_statement assignment identifier n... | Return axis, which arc is nearest to point. |
def read_handshake(self):
msg = self.read_message()
pid_dir, _conf, _context = msg["pidDir"], msg["conf"], msg["context"]
open(join(pid_dir, str(self.pid)), "w").close()
self.send_message({"pid": self.pid})
return _conf, _context | module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute identifier identifier argument_list expression_statement assignment pattern_list identifier identifier identifier expression_list subscript identifier string string_start string_content string_end... | Read and process an initial handshake message from Storm. |
def cmd_distclean(self, *args):
print("Warning: Your ndk, sdk and all other cached packages will be"
" removed. Continue? (y/n)")
if sys.stdin.readline().lower()[0] == 'y':
self.info('Clean the global build directory')
if not exists(self.global_buildozer_dir):
... | module function_definition identifier parameters identifier list_splat_pattern identifier block expression_statement call identifier argument_list concatenated_string string string_start string_content string_end string string_start string_content string_end if_statement comparison_operator subscript call attribute cal... | Clean the whole Buildozer environment. |
def all_apps(self):
cmd = ["heroku", "apps", "--json"]
if self.team:
cmd.extend(["--team", self.team])
return json.loads(self._result(cmd)) | module function_definition identifier parameters identifier block expression_statement assignment identifier list string string_start string_content string_end string string_start string_content string_end string string_start string_content string_end if_statement attribute identifier identifier block expression_statem... | Capture a backup of the app. |
def remove_domain_user_role(request, user, role, domain=None):
manager = keystoneclient(request, admin=True).roles
return manager.revoke(role, user=user, domain=domain) | module function_definition identifier parameters identifier identifier identifier default_parameter identifier none block expression_statement assignment identifier attribute call identifier argument_list identifier keyword_argument identifier true identifier return_statement call attribute identifier identifier argume... | Removes a given single role for a user from a domain. |
def session_demo_danger_callback(da_children, session_state=None, **kwargs):
'Update output based just on state'
if not session_state:
return "Session state not yet available"
return "Session state contains: " + str(session_state.get('bootstrap_demo_state', "NOTHING")) + " and the page render count ... | module function_definition identifier parameters identifier default_parameter identifier none dictionary_splat_pattern identifier block expression_statement string string_start string_content string_end if_statement not_operator identifier block return_statement string string_start string_content string_end return_stat... | Update output based just on state |
def _bake_css(link):
if "href" in link.attrs and (re.search("\.css$", link["href"])) or ("rel" in link.attrs and link["rel"] is "stylesheet") or ("type" in link.attrs and link["type"] is "text/css"):
if re.match("https?://", link["href"]):
css_data = _load_url(link["href"]).read()
else:
... | module function_definition identifier parameters identifier block if_statement boolean_operator boolean_operator boolean_operator comparison_operator string string_start string_content string_end attribute identifier identifier parenthesized_expression call attribute identifier identifier argument_list string string_st... | Takes a link element and turns it into an inline style link if applicable |
def read_with_columns(func):
def wrapper(*args, **kwargs):
columns = kwargs.pop("columns", None)
tab = func(*args, **kwargs)
if columns is None:
return tab
return tab[columns]
return _safe_wraps(wrapper, func) | module function_definition identifier parameters identifier block function_definition identifier parameters list_splat_pattern identifier dictionary_splat_pattern identifier block expression_statement assignment identifier call attribute identifier identifier argument_list string string_start string_content string_end ... | Decorate a Table read method to use the ``columns`` keyword |
def getSets(self):
sets = lock_and_call(
lambda: self._impl.getSets(),
self._lock
)
return EntityMap(sets, Set) | module function_definition identifier parameters identifier block expression_statement assignment identifier call identifier argument_list lambda call attribute attribute identifier identifier identifier argument_list attribute identifier identifier return_statement call identifier argument_list identifier identifier | Get all the sets declared. |
def populate(self, other):
self.clear()
self.update(other)
self.reset_all_changes() | module function_definition identifier parameters identifier identifier block expression_statement call attribute identifier identifier argument_list expression_statement call attribute identifier identifier argument_list identifier expression_statement call attribute identifier identifier argument_list | Like update, but clears the contents first. |
def show_dscp_marking_rule(self, rule, policy, body=None):
return self.get(self.qos_dscp_marking_rule_path %
(policy, rule), body=body) | module function_definition identifier parameters identifier identifier identifier default_parameter identifier none block return_statement call attribute identifier identifier argument_list binary_operator attribute identifier identifier tuple identifier identifier keyword_argument identifier identifier | Shows information of a certain DSCP marking rule. |
def download_file_helper(url, input_path):
r = requests.get(url, stream=True)
if r.status_code != 200:
cli_log.error("Failed to download file: %s" % r.json()["message"])
local_full_path = get_download_dest(input_path, r.url)
original_filename = os.path.split(local_full_path)[-1]
with open(lo... | module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list identifier keyword_argument identifier true if_statement comparison_operator attribute identifier identifier integer block expression_statement call ... | Manages the chunked downloading of a file given an url |
def push_state(self, new_file=''):
'Saves the current error state to parse subpackages'
self.subpackages.append({'detected_type': self.detected_type,
'message_tree': self.message_tree,
'resources': self.pushable_resources,
... | module function_definition identifier parameters identifier default_parameter identifier string string_start string_end block expression_statement string string_start string_content string_end expression_statement call attribute attribute identifier identifier identifier argument_list dictionary pair string string_star... | Saves the current error state to parse subpackages |
def FilterCollection(aff4_collection, offset, count=0, filter_value=None):
if offset < 0:
raise ValueError("Offset needs to be greater than or equal to zero")
if count < 0:
raise ValueError("Count needs to be greater than or equal to zero")
count = count or sys.maxsize
if filter_value:
index = 0
... | module function_definition identifier parameters identifier identifier default_parameter identifier integer default_parameter identifier none block if_statement comparison_operator identifier integer block raise_statement call identifier argument_list string string_start string_content string_end if_statement compariso... | Filters an aff4 collection, getting count elements, starting at offset. |
def name(self):
if self._path:
name = self._path
if name[0] != '/':
name = '/' + name
return name
return '/' | module function_definition identifier parameters identifier block if_statement attribute identifier identifier block expression_statement assignment identifier attribute identifier identifier if_statement comparison_operator subscript identifier integer string string_start string_content string_end block expression_sta... | Group name following h5py convention. |
async def send_data(self, data, addr):
channel = self.peer_to_channel.get(addr)
if channel is None:
channel = self.channel_number
self.channel_number += 1
self.channel_to_peer[channel] = addr
self.peer_to_channel[addr] = channel
await self.chan... | module function_definition identifier parameters identifier identifier identifier block expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list identifier if_statement comparison_operator identifier none block expression_statement assignment identifier attribut... | Send data to a remote host via the TURN server. |
def register(self):
self._do_selection_update = True
if self.__my_selected_sm_id is not None:
self.relieve_model(self._selected_sm_model)
self.__my_selected_sm_id = self.model.selected_state_machine_id
if self.__my_selected_sm_id is not None:
self._selected_sm_mod... | module function_definition identifier parameters identifier block expression_statement assignment attribute identifier identifier true if_statement comparison_operator attribute identifier identifier none block expression_statement call attribute identifier identifier argument_list attribute identifier identifier expre... | Change the state machine that is observed for new selected states to the selected state machine. |
def uint64(self, val):
try:
self.msg += [pack("!Q", val)]
except struct.error:
raise ValueError("Expected uint64")
return self | module function_definition identifier parameters identifier identifier block try_statement block expression_statement augmented_assignment attribute identifier identifier list call identifier argument_list string string_start string_content string_end identifier except_clause attribute identifier identifier block raise... | append a frame containing a uint64 |
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