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def draw_ticks(self): self._canvas_ticks.create_line((0, 10, self.pixel_width, 10), fill="black") self._ticks = list(TimeLine.range(self._start, self._finish, self._tick_resolution / self._zoom_factor)) for tick in self._ticks: string = TimeLine.get_time_string(tick, self._unit) x = self.get_time_position(tick) x_tick = x + 1 if x == 0 else (x - 1 if x == self.pixel_width else x) x_text = x + 15 if x - 15 <= 0 else (x - 15 if x + 15 >= self.pixel_width else x) self._canvas_ticks.create_text((x_text, 20), text=string, fill="black", font=("default", 10)) self._canvas_ticks.create_line((x_tick, 5, x_tick, 15), fill="black") self._canvas_ticks.config(scrollregion="0 0 {0} {1}".format(self.pixel_width, 30))
module function_definition identifier parameters identifier block expression_statement call attribute attribute identifier identifier identifier argument_list tuple integer integer attribute identifier identifier integer keyword_argument identifier string string_start string_content string_end expression_statement assignment attribute identifier identifier call identifier argument_list call attribute identifier identifier argument_list attribute identifier identifier attribute identifier identifier binary_operator attribute identifier identifier attribute identifier identifier for_statement identifier attribute identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list identifier attribute identifier identifier expression_statement assignment identifier call attribute identifier identifier argument_list identifier expression_statement assignment identifier conditional_expression binary_operator identifier integer comparison_operator identifier integer parenthesized_expression conditional_expression binary_operator identifier integer comparison_operator identifier attribute identifier identifier identifier expression_statement assignment identifier conditional_expression binary_operator identifier integer comparison_operator binary_operator identifier integer integer parenthesized_expression conditional_expression binary_operator identifier integer comparison_operator binary_operator identifier integer attribute identifier identifier identifier expression_statement call attribute attribute identifier identifier identifier argument_list tuple identifier integer keyword_argument identifier identifier keyword_argument identifier string string_start string_content string_end keyword_argument identifier tuple string string_start string_content string_end integer expression_statement call attribute attribute identifier identifier identifier argument_list tuple identifier integer identifier integer keyword_argument identifier string string_start string_content string_end expression_statement call attribute attribute identifier identifier identifier argument_list keyword_argument identifier call attribute string string_start string_content string_end identifier argument_list attribute identifier identifier integer
Draw the time tick markers on the TimeLine Canvas
def jars(self, absolute=True): jars = glob(os.path.join(self._jar_path, '*.jar')) return jars if absolute else map(lambda j: os.path.abspath(j), jars)
module function_definition identifier parameters identifier default_parameter identifier true block expression_statement assignment identifier call identifier argument_list call attribute attribute identifier identifier identifier argument_list attribute identifier identifier string string_start string_content string_end return_statement conditional_expression identifier identifier call identifier argument_list lambda lambda_parameters identifier call attribute attribute identifier identifier identifier argument_list identifier identifier
List of jars in the jar path
def coerce(cls, key, value): if isinstance(value, string_types): value = value.strip() if value[0] == '[': try: value = json.loads(value) except ValueError: raise ValueError("Failed to parse JSON: '{}' ".format(value)) else: value = value.split(',') if not value: value = [] self = MutationList((MutationObj.coerce(key, v) for v in value)) self._key = key return self
module function_definition identifier parameters identifier identifier identifier block if_statement call identifier argument_list identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list if_statement comparison_operator subscript identifier integer string string_start string_content string_end block try_statement block expression_statement assignment identifier call attribute identifier identifier argument_list identifier except_clause identifier block raise_statement call identifier argument_list call attribute string string_start string_content string_end identifier argument_list identifier else_clause block expression_statement assignment identifier call attribute identifier identifier argument_list string string_start string_content string_end if_statement not_operator identifier block expression_statement assignment identifier list expression_statement assignment identifier call identifier argument_list generator_expression call attribute identifier identifier argument_list identifier identifier for_in_clause identifier identifier expression_statement assignment attribute identifier identifier identifier return_statement identifier
Convert plain list to MutationList.
def OnPageSetup(self, event): print_data = self.main_window.print_data new_print_data = \ self.main_window.interfaces.get_print_setup(print_data) self.main_window.print_data = new_print_data
module function_definition identifier parameters identifier identifier block expression_statement assignment identifier attribute attribute identifier identifier identifier expression_statement assignment identifier line_continuation call attribute attribute attribute identifier identifier identifier identifier argument_list identifier expression_statement assignment attribute attribute identifier identifier identifier identifier
Page setup handler for printing framework
def delete(self, endpoint: str, **kwargs) -> dict: return self._request('DELETE', endpoint, **kwargs)
module function_definition identifier parameters identifier typed_parameter identifier type identifier dictionary_splat_pattern identifier type identifier block return_statement call attribute identifier identifier argument_list string string_start string_content string_end identifier dictionary_splat identifier
HTTP DELETE operation to API endpoint.
def scene_color(frames): reader = MessageReader(frames) results = reader.string("command").uint32("scene_id").uint8_3("color").assert_end().get() if results.command != "scene.color": raise MessageParserError("Command is not 'scene.color'") return (results.scene_id, np.array([results.color[0]/255, results.color[1]/255, results.color[2]/255]))
module function_definition identifier parameters identifier block expression_statement assignment identifier call identifier argument_list identifier expression_statement assignment identifier call attribute call attribute call attribute call attribute call attribute identifier identifier argument_list string string_start string_content string_end identifier argument_list string string_start string_content string_end identifier argument_list string string_start string_content string_end identifier argument_list identifier argument_list if_statement comparison_operator attribute identifier identifier string string_start string_content string_end block raise_statement call identifier argument_list string string_start string_content string_end return_statement tuple attribute identifier identifier call attribute identifier identifier argument_list list binary_operator subscript attribute identifier identifier integer integer binary_operator subscript attribute identifier identifier integer integer binary_operator subscript attribute identifier identifier integer integer
parse a scene.color message
def force_utc(time, name='field', precision=6): if not isinstance(time, datetime.datetime): raise CloudValueError("%s should be of type datetime" % (name,)) clip = 6 - precision timestring = time.isoformat() if clip: timestring = timestring[:-clip] return timestring + "Z"
module function_definition identifier parameters identifier default_parameter identifier string string_start string_content string_end default_parameter identifier integer block if_statement not_operator call identifier argument_list identifier attribute identifier identifier block raise_statement call identifier argument_list binary_operator string string_start string_content string_end tuple identifier expression_statement assignment identifier binary_operator integer identifier expression_statement assignment identifier call attribute identifier identifier argument_list if_statement identifier block expression_statement assignment identifier subscript identifier slice unary_operator identifier return_statement binary_operator identifier string string_start string_content string_end
Appending 'Z' to isoformatted time - explicit timezone is required for most APIs
def createTileUrl(self, x, y, z): return self.tileTemplate.replace('{{x}}', str(x)).replace('{{y}}', str( y)).replace('{{z}}', str(z))
module function_definition identifier parameters identifier identifier identifier identifier block return_statement call attribute call attribute call attribute attribute identifier identifier identifier argument_list string string_start string_content string_end call identifier argument_list identifier identifier argument_list string string_start string_content string_end call identifier argument_list identifier identifier argument_list string string_start string_content string_end call identifier argument_list identifier
returns new tile url based on template
def _validate_overriden_fields_are_not_defined_in_superclasses(class_to_field_type_overrides, schema_graph): for class_name, field_type_overrides in six.iteritems(class_to_field_type_overrides): for superclass_name in schema_graph.get_inheritance_set(class_name): if superclass_name != class_name: superclass = schema_graph.get_element_by_class_name(superclass_name) for field_name in field_type_overrides: if field_name in superclass.properties: raise AssertionError( u'Attempting to override field "{}" from class "{}", but the field is ' u'defined in superclass "{}"' .format(field_name, class_name, superclass_name))
module function_definition identifier parameters identifier identifier block for_statement pattern_list identifier identifier call attribute identifier identifier argument_list identifier block for_statement identifier call attribute identifier identifier argument_list identifier block if_statement comparison_operator identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list identifier for_statement identifier identifier block if_statement comparison_operator identifier attribute identifier identifier block raise_statement call identifier argument_list call attribute concatenated_string string string_start string_content string_end string string_start string_content string_end identifier argument_list identifier identifier identifier
Assert that the fields we want to override are not defined in superclasses.
def process_request(self, request): domain, host = map(lower, (self.get_domain_for_request(request), request.get_host())) pattern = r'^(?:(?P<subdomain>.*?)\.)?%s(?::.*)?$' % re.escape(domain) matches = re.match(pattern, host) if matches: request.subdomain = matches.group('subdomain') else: request.subdomain = None logger.warning('The host %s does not belong to the domain %s, ' 'unable to identify the subdomain for this request', request.get_host(), domain)
module function_definition identifier parameters identifier identifier block expression_statement assignment pattern_list identifier identifier call identifier argument_list identifier tuple call attribute identifier identifier argument_list identifier call attribute identifier identifier argument_list expression_statement assignment identifier binary_operator string string_start string_content string_end call attribute identifier identifier argument_list identifier expression_statement assignment identifier call attribute identifier identifier argument_list identifier identifier if_statement identifier block expression_statement assignment attribute identifier identifier call attribute identifier identifier argument_list string string_start string_content string_end else_clause block expression_statement assignment attribute identifier identifier none expression_statement call attribute identifier identifier argument_list concatenated_string string string_start string_content string_end string string_start string_content string_end call attribute identifier identifier argument_list identifier
Adds a ``subdomain`` attribute to the ``request`` parameter.
def stop(self): if self._http_server: self._http_server.shutdown() self._http_server.server_close() self._http_server = None self._http_thread = None if self._https_server: self._https_server.shutdown() self._https_server.server_close() self._https_server = None self._https_thread = None
module function_definition identifier parameters identifier block if_statement attribute identifier identifier block expression_statement call attribute attribute identifier identifier identifier argument_list expression_statement call attribute attribute identifier identifier identifier argument_list expression_statement assignment attribute identifier identifier none expression_statement assignment attribute identifier identifier none if_statement attribute identifier identifier block expression_statement call attribute attribute identifier identifier identifier argument_list expression_statement call attribute attribute identifier identifier identifier argument_list expression_statement assignment attribute identifier identifier none expression_statement assignment attribute identifier identifier none
Stop the WBEM listener threads, if they are running.
def endpoint_from_name(endpoint_name): if endpoint_name is None: return None factory = relation_factory(endpoint_name) if factory: return factory.from_name(endpoint_name)
module function_definition identifier parameters identifier block if_statement comparison_operator identifier none block return_statement none expression_statement assignment identifier call identifier argument_list identifier if_statement identifier block return_statement call attribute identifier identifier argument_list identifier
The object used for interacting with the named relations, or None.
def _writeContaminantTable(self, session, fileObject, mapTable, contaminants, replaceParamFile): fileObject.write('%s\n' % (mapTable.name)) fileObject.write('NUM_CONTAM %s\n' % (mapTable.numContam)) for contaminant in contaminants: fileObject.write( '"%s" "%s" %s\n' % (contaminant.name, contaminant.indexMap.name, contaminant.outputFilename)) precipConcString = vwp(contaminant.precipConc, replaceParamFile) partitionString = vwp(contaminant.partition, replaceParamFile) try: precipConc = '%.2f' % precipConcString except: precipConc = '%s' % precipConcString try: partition = '%.2f' % partitionString except: partition = '%s' % partitionString fileObject.write('PRECIP_CONC%s%s\n' % (' ' * 10, precipConc)) fileObject.write('PARTITION%s%s\n' % (' ' * 12, partition)) fileObject.write('NUM_IDS %s\n' % contaminant.numIDs) self._writeValues(session, fileObject, mapTable, contaminant, replaceParamFile)
module function_definition identifier parameters identifier identifier identifier identifier identifier identifier block expression_statement call attribute identifier identifier argument_list binary_operator string string_start string_content escape_sequence string_end parenthesized_expression attribute identifier identifier expression_statement call attribute identifier identifier argument_list binary_operator string string_start string_content escape_sequence string_end parenthesized_expression attribute identifier identifier for_statement identifier identifier block expression_statement call attribute identifier identifier argument_list binary_operator string string_start string_content escape_sequence string_end tuple attribute identifier identifier attribute attribute identifier identifier identifier attribute identifier identifier expression_statement assignment identifier call identifier argument_list attribute identifier identifier identifier expression_statement assignment identifier call identifier argument_list attribute identifier identifier identifier try_statement block expression_statement assignment identifier binary_operator string string_start string_content string_end identifier except_clause block expression_statement assignment identifier binary_operator string string_start string_content string_end identifier try_statement block expression_statement assignment identifier binary_operator string string_start string_content string_end identifier except_clause block expression_statement assignment identifier binary_operator string string_start string_content string_end identifier expression_statement call attribute identifier identifier argument_list binary_operator string string_start string_content escape_sequence string_end tuple binary_operator string string_start string_content string_end integer identifier expression_statement call attribute identifier identifier argument_list binary_operator string string_start string_content escape_sequence string_end tuple binary_operator string string_start string_content string_end integer identifier expression_statement call attribute identifier identifier argument_list binary_operator string string_start string_content escape_sequence string_end attribute identifier identifier expression_statement call attribute identifier identifier argument_list identifier identifier identifier identifier identifier
This method writes the contaminant transport mapping table case.
def main(argv=None): arguments = cli_common(__doc__, argv=argv) campaign_file = arguments['CAMPAIGN_FILE'] if arguments['-g']: if osp.exists(campaign_file): raise Exception('Campaign file already exists') with open(campaign_file, 'w') as ostr: Generator().write(ostr) else: node = arguments.get('-n') output_dir = arguments.get('--output-dir') exclude_nodes = arguments.get('--exclude-nodes') srun_tag = arguments.get('--srun') driver = CampaignDriver( campaign_file, node=node, output_dir=output_dir, srun=srun_tag, exclude_nodes=exclude_nodes, ) driver() if argv is not None: return driver campaign_fd = int(arguments.get('--campaign-path-fd') or 1) message = (osp.abspath(driver.campaign_path) + '\n').encode() os.write(campaign_fd, message)
module function_definition identifier parameters default_parameter identifier none block expression_statement assignment identifier call identifier argument_list identifier keyword_argument identifier identifier expression_statement assignment identifier subscript identifier string string_start string_content string_end if_statement subscript identifier string string_start string_content string_end block if_statement call attribute identifier identifier argument_list identifier block raise_statement call identifier argument_list string string_start string_content string_end with_statement with_clause with_item as_pattern call identifier argument_list identifier string string_start string_content string_end as_pattern_target identifier block expression_statement call attribute call identifier argument_list identifier argument_list identifier else_clause block expression_statement assignment identifier call attribute identifier identifier argument_list string string_start string_content string_end expression_statement assignment identifier call attribute identifier identifier argument_list string string_start string_content string_end expression_statement assignment identifier call attribute identifier identifier argument_list string string_start string_content string_end expression_statement assignment identifier call attribute identifier identifier argument_list string string_start string_content string_end expression_statement assignment identifier call identifier argument_list identifier keyword_argument identifier identifier keyword_argument identifier identifier keyword_argument identifier identifier keyword_argument identifier identifier expression_statement call identifier argument_list if_statement comparison_operator identifier none block return_statement identifier expression_statement assignment identifier call identifier argument_list boolean_operator call attribute identifier identifier argument_list string string_start string_content string_end integer expression_statement assignment identifier call attribute parenthesized_expression binary_operator call attribute identifier identifier argument_list attribute identifier identifier string string_start string_content escape_sequence string_end identifier argument_list expression_statement call attribute identifier identifier argument_list identifier identifier
ben-sh entry point
def lin_sim(goid1, goid2, godag, termcnts): sim_r = resnik_sim(goid1, goid2, godag, termcnts) return lin_sim_calc(goid1, goid2, sim_r, termcnts)
module function_definition identifier parameters identifier identifier identifier identifier block expression_statement assignment identifier call identifier argument_list identifier identifier identifier identifier return_statement call identifier argument_list identifier identifier identifier identifier
Computes Lin's similarity measure.
def _len_objid(self): try: return self._size except AttributeError: temp = (self.object_id, self.birth_vol_id, self.birth_object_id, self.birth_domain_id) self._size = sum([ObjectID._UUID_SIZE for data in temp if data is not None]) return self._size
module function_definition identifier parameters identifier block try_statement block return_statement attribute identifier identifier except_clause identifier block expression_statement assignment identifier tuple attribute identifier identifier attribute identifier identifier attribute identifier identifier attribute identifier identifier expression_statement assignment attribute identifier identifier call identifier argument_list list_comprehension attribute identifier identifier for_in_clause identifier identifier if_clause comparison_operator identifier none return_statement attribute identifier identifier
Get the actual size of the content, as some attributes have variable sizes
def xyz2lonlat(x, y, z): lon = xu.rad2deg(xu.arctan2(y, x)) lat = xu.rad2deg(xu.arctan2(z, xu.sqrt(x**2 + y**2))) return lon, lat
module function_definition identifier parameters identifier identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list call attribute identifier identifier argument_list identifier identifier expression_statement assignment identifier call attribute identifier identifier argument_list call attribute identifier identifier argument_list identifier call attribute identifier identifier argument_list binary_operator binary_operator identifier integer binary_operator identifier integer return_statement expression_list identifier identifier
Convert cartesian to lon lat.
def register_new_suffix_tree(case_insensitive=False): assert isinstance(case_insensitive, bool) root_node = register_new_node() suffix_tree_id = uuid4() event = SuffixTree.Created( originator_id=suffix_tree_id, root_node_id=root_node.id, case_insensitive=case_insensitive, ) entity = SuffixTree.mutate(event=event) assert isinstance(entity, SuffixTree) entity.nodes[root_node.id] = root_node publish(event) return entity
module function_definition identifier parameters default_parameter identifier false block assert_statement call identifier argument_list identifier identifier expression_statement assignment identifier call identifier argument_list expression_statement assignment identifier call identifier argument_list expression_statement assignment identifier call attribute identifier identifier argument_list keyword_argument identifier identifier keyword_argument identifier attribute identifier identifier keyword_argument identifier identifier expression_statement assignment identifier call attribute identifier identifier argument_list keyword_argument identifier identifier assert_statement call identifier argument_list identifier identifier expression_statement assignment subscript attribute identifier identifier attribute identifier identifier identifier expression_statement call identifier argument_list identifier return_statement identifier
Factory method, returns new suffix tree object.
def check_has_version(self, api): if not hasattr(api, 'version'): msg = 'The Api class "{}" lacks a `version` attribute.' return [msg.format(api.__name__)]
module function_definition identifier parameters identifier identifier block if_statement not_operator call identifier argument_list identifier string string_start string_content string_end block expression_statement assignment identifier string string_start string_content string_end return_statement list call attribute identifier identifier argument_list attribute identifier identifier
An API class must have a `version` attribute.
def write_data(self, command, data, timeout=None): self.write_message(FilesyncMessageTypes.DataMessage(command, data), timeout)
module function_definition identifier parameters identifier identifier identifier default_parameter identifier none block expression_statement call attribute identifier identifier argument_list call attribute identifier identifier argument_list identifier identifier identifier
Shortcut for writing specifically a DataMessage.
def key_to_metric(self, key): return ''.join(l if l in string.letters else '_' for l in key)
module function_definition identifier parameters identifier identifier block return_statement call attribute string string_start string_end identifier generator_expression conditional_expression identifier comparison_operator identifier attribute identifier identifier string string_start string_content string_end for_in_clause identifier identifier
Replace all non-letter characters with underscores
def _get_branch(repo, name): try: return [x for x in _all_branches(repo) if x[0] == name][0] except IndexError: return False
module function_definition identifier parameters identifier identifier block try_statement block return_statement subscript list_comprehension identifier for_in_clause identifier call identifier argument_list identifier if_clause comparison_operator subscript identifier integer identifier integer except_clause identifier block return_statement false
Find the requested branch in the specified repo
def iter_surrounding(self, center_key): for shift in self.neighbor_indexes: key = tuple(np.add(center_key, shift).astype(int)) if self.integer_cell is not None: key = self.wrap_key(key) bin = self._bins.get(key) if bin is not None: yield key, bin
module function_definition identifier parameters identifier identifier block for_statement identifier attribute identifier identifier block expression_statement assignment identifier call identifier argument_list call attribute call attribute identifier identifier argument_list identifier identifier identifier argument_list identifier if_statement comparison_operator attribute identifier identifier none block expression_statement assignment identifier call attribute identifier identifier argument_list identifier expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list identifier if_statement comparison_operator identifier none block expression_statement yield expression_list identifier identifier
Iterate over all bins surrounding the given bin
def _check_repo_sign_utils_support(name): if salt.utils.path.which(name): return True else: raise CommandExecutionError( 'utility \'{0}\' needs to be installed or made available in search path'.format(name) )
module function_definition identifier parameters identifier block if_statement call attribute attribute attribute identifier identifier identifier identifier argument_list identifier block return_statement true else_clause block raise_statement call identifier argument_list call attribute string string_start string_content escape_sequence escape_sequence string_end identifier argument_list identifier
Check for specified command name in search path
def match_namespace(self, el, tag): match = True namespace = self.get_tag_ns(el) default_namespace = self.namespaces.get('') tag_ns = '' if tag.prefix is None else self.namespaces.get(tag.prefix, None) if tag.prefix is None and (default_namespace is not None and namespace != default_namespace): match = False elif (tag.prefix is not None and tag.prefix == '' and namespace): match = False elif ( tag.prefix and tag.prefix != '*' and (tag_ns is None or namespace != tag_ns) ): match = False return match
module function_definition identifier parameters identifier identifier identifier block expression_statement assignment identifier true expression_statement assignment identifier call attribute identifier identifier argument_list identifier expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list string string_start string_end expression_statement assignment identifier conditional_expression string string_start string_end comparison_operator attribute identifier identifier none call attribute attribute identifier identifier identifier argument_list attribute identifier identifier none if_statement boolean_operator comparison_operator attribute identifier identifier none parenthesized_expression boolean_operator comparison_operator identifier none comparison_operator identifier identifier block expression_statement assignment identifier false elif_clause parenthesized_expression boolean_operator boolean_operator comparison_operator attribute identifier identifier none comparison_operator attribute identifier identifier string string_start string_end identifier block expression_statement assignment identifier false elif_clause parenthesized_expression boolean_operator boolean_operator attribute identifier identifier comparison_operator attribute identifier identifier string string_start string_content string_end parenthesized_expression boolean_operator comparison_operator identifier none comparison_operator identifier identifier block expression_statement assignment identifier false return_statement identifier
Match the namespace of the element.
def check_is_an_array(var, allow_none=False): if not is_an_array(var, allow_none=allow_none): raise TypeError("var must be a NumPy array, however type(var) is {}" .format(type(var)))
module function_definition identifier parameters identifier default_parameter identifier false block if_statement not_operator call identifier argument_list identifier keyword_argument identifier identifier block raise_statement call identifier argument_list call attribute string string_start string_content string_end identifier argument_list call identifier argument_list identifier
Calls is_an_array and raises a type error if the check fails.
def process_models(attrs, base_model_class): attrs.update(base_model_class._DEFAULT_BASE_FIELDS) attrs['_instance_registry'] = set() attrs['_is_unpermitted_fields_set'] = False attrs['save_meta_data'] = None attrs['_pre_save_hook_called'] = False attrs['_post_save_hook_called'] = False DEFAULT_META = {'bucket_type': settings.DEFAULT_BUCKET_TYPE, 'field_permissions': {}, 'app': 'main', 'list_fields': [], 'list_filters': [], 'search_fields': [], 'fake_model': False, } if 'Meta' not in attrs: attrs['Meta'] = type('Meta', (object,), DEFAULT_META) else: for k, v in DEFAULT_META.items(): if k not in attrs['Meta'].__dict__: setattr(attrs['Meta'], k, v)
module function_definition identifier parameters identifier identifier block expression_statement call attribute identifier identifier argument_list attribute identifier identifier expression_statement assignment subscript identifier string string_start string_content string_end call identifier argument_list expression_statement assignment subscript identifier string string_start string_content string_end false expression_statement assignment subscript identifier string string_start string_content string_end none expression_statement assignment subscript identifier string string_start string_content string_end false expression_statement assignment subscript identifier string string_start string_content string_end false expression_statement assignment identifier dictionary pair string string_start string_content string_end attribute identifier identifier pair string string_start string_content string_end dictionary pair string string_start string_content string_end string string_start string_content string_end pair string string_start string_content string_end list pair string string_start string_content string_end list pair string string_start string_content string_end list pair string string_start string_content string_end false if_statement comparison_operator string string_start string_content string_end identifier block expression_statement assignment subscript identifier string string_start string_content string_end call identifier argument_list string string_start string_content string_end tuple identifier identifier else_clause block for_statement pattern_list identifier identifier call attribute identifier identifier argument_list block if_statement comparison_operator identifier attribute subscript identifier string string_start string_content string_end identifier block expression_statement call identifier argument_list subscript identifier string string_start string_content string_end identifier identifier
Attach default fields and meta options to models
def generate_data_for_registered_problem(problem_name): tf.logging.info("Generating data for %s.", problem_name) if FLAGS.num_shards: raise ValueError("--num_shards should not be set for registered Problem.") problem = registry.problem(problem_name) task_id = None if FLAGS.task_id < 0 else FLAGS.task_id data_dir = os.path.expanduser(FLAGS.data_dir) tmp_dir = os.path.expanduser(FLAGS.tmp_dir) if task_id is None and problem.multiprocess_generate: if FLAGS.task_id_start != -1: assert FLAGS.task_id_end != -1 task_id_start = FLAGS.task_id_start task_id_end = FLAGS.task_id_end else: task_id_start = 0 task_id_end = problem.num_generate_tasks pool = multiprocessing.Pool(processes=FLAGS.num_concurrent_processes) problem.prepare_to_generate(data_dir, tmp_dir) args = [(problem_name, data_dir, tmp_dir, task_id) for task_id in range(task_id_start, task_id_end)] pool.map(generate_data_in_process, args) else: problem.generate_data(data_dir, tmp_dir, task_id)
module function_definition identifier parameters identifier block expression_statement call attribute attribute identifier identifier identifier argument_list string string_start string_content string_end identifier if_statement attribute identifier identifier block raise_statement call identifier argument_list string string_start string_content string_end expression_statement assignment identifier call attribute identifier identifier argument_list identifier expression_statement assignment identifier conditional_expression none comparison_operator attribute identifier identifier integer attribute identifier identifier expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list attribute identifier identifier expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list attribute identifier identifier if_statement boolean_operator comparison_operator identifier none attribute identifier identifier block if_statement comparison_operator attribute identifier identifier unary_operator integer block assert_statement comparison_operator attribute identifier identifier unary_operator integer expression_statement assignment identifier attribute identifier identifier expression_statement assignment identifier attribute identifier identifier else_clause block expression_statement assignment identifier integer expression_statement assignment identifier attribute identifier identifier expression_statement assignment identifier call attribute identifier identifier argument_list keyword_argument identifier attribute identifier identifier expression_statement call attribute identifier identifier argument_list identifier identifier expression_statement assignment identifier list_comprehension tuple identifier identifier identifier identifier for_in_clause identifier call identifier argument_list identifier identifier expression_statement call attribute identifier identifier argument_list identifier identifier else_clause block expression_statement call attribute identifier identifier argument_list identifier identifier identifier
Generate data for a registered problem.
def checksum(digits): weights_for_check_digit = [9, 7, 3, 1, 9, 7, 3, 1, 9, 7] check_digit = 0 for i in range(0, 10): check_digit += weights_for_check_digit[i] * digits[i] check_digit %= 10 return check_digit
module function_definition identifier parameters identifier block expression_statement assignment identifier list integer integer integer integer integer integer integer integer integer integer expression_statement assignment identifier integer for_statement identifier call identifier argument_list integer integer block expression_statement augmented_assignment identifier binary_operator subscript identifier identifier subscript identifier identifier expression_statement augmented_assignment identifier integer return_statement identifier
Calculates and returns a control digit for given list of digits basing on PESEL standard.
def from_date(self, value: date) -> datetime: assert isinstance(value, date) self.value = datetime(value.year, value.month, value.day) return self.value
module function_definition identifier parameters identifier typed_parameter identifier type identifier type identifier block assert_statement call identifier argument_list identifier identifier expression_statement assignment attribute identifier identifier call identifier argument_list attribute identifier identifier attribute identifier identifier attribute identifier identifier return_statement attribute identifier identifier
Initializes from the given date value
def cmd_ok(cmd): try: sp.check_call(cmd, stderr=sp.PIPE, stdout=sp.PIPE) except sp.CalledProcessError: pass except: sys.stderr.write("{} not found, skipping\n".format(cmd)) return False return True
module function_definition identifier parameters identifier block try_statement block expression_statement call attribute identifier identifier argument_list identifier keyword_argument identifier attribute identifier identifier keyword_argument identifier attribute identifier identifier except_clause attribute identifier identifier block pass_statement except_clause block expression_statement call attribute attribute identifier identifier identifier argument_list call attribute string string_start string_content escape_sequence string_end identifier argument_list identifier return_statement false return_statement true
Returns True if cmd can be run.
def saturate_color(color, amount): r, g, b = hex_to_rgb(color) r, g, b = [x/255.0 for x in (r, g, b)] h, l, s = colorsys.rgb_to_hls(r, g, b) s = amount r, g, b = colorsys.hls_to_rgb(h, l, s) r, g, b = [x*255.0 for x in (r, g, b)] return rgb_to_hex((int(r), int(g), int(b)))
module function_definition identifier parameters identifier identifier block expression_statement assignment pattern_list identifier identifier identifier call identifier argument_list identifier expression_statement assignment pattern_list identifier identifier identifier list_comprehension binary_operator identifier float for_in_clause identifier tuple identifier identifier identifier expression_statement assignment pattern_list identifier identifier identifier call attribute identifier identifier argument_list identifier identifier identifier expression_statement assignment identifier identifier expression_statement assignment pattern_list identifier identifier identifier call attribute identifier identifier argument_list identifier identifier identifier expression_statement assignment pattern_list identifier identifier identifier list_comprehension binary_operator identifier float for_in_clause identifier tuple identifier identifier identifier return_statement call identifier argument_list tuple call identifier argument_list identifier call identifier argument_list identifier call identifier argument_list identifier
Saturate a hex color.
def add_pii_permissions(self, group, view_only=None): pii_model_names = [m.split(".")[1] for m in self.pii_models] if view_only: permissions = Permission.objects.filter( (Q(codename__startswith="view") | Q(codename__startswith="display")), content_type__model__in=pii_model_names, ) else: permissions = Permission.objects.filter( content_type__model__in=pii_model_names ) for permission in permissions: group.permissions.add(permission) for model in self.pii_models: permissions = Permission.objects.filter( codename__startswith="view", content_type__app_label=model.split(".")[0], content_type__model=f"historical{model.split('.')[1]}", ) for permission in permissions: group.permissions.add(permission) for permission in Permission.objects.filter( content_type__app_label="edc_registration", codename__in=[ "add_registeredsubject", "delete_registeredsubject", "change_registeredsubject", ], ): group.permissions.remove(permission) permission = Permission.objects.get( content_type__app_label="edc_registration", codename="view_historicalregisteredsubject", ) group.permissions.add(permission)
module function_definition identifier parameters identifier identifier default_parameter identifier none block expression_statement assignment identifier list_comprehension subscript call attribute identifier identifier argument_list string string_start string_content string_end integer for_in_clause identifier attribute identifier identifier if_statement identifier block expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list parenthesized_expression binary_operator call identifier argument_list keyword_argument identifier string string_start string_content string_end call identifier argument_list keyword_argument identifier string string_start string_content string_end keyword_argument identifier identifier else_clause block expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list keyword_argument identifier identifier for_statement identifier identifier block expression_statement call attribute attribute identifier identifier identifier argument_list identifier for_statement identifier attribute identifier identifier block expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list keyword_argument identifier string string_start string_content string_end keyword_argument identifier subscript call attribute identifier identifier argument_list string string_start string_content string_end integer keyword_argument identifier string string_start string_content interpolation subscript call attribute identifier identifier argument_list string string_start string_content string_end integer string_end for_statement identifier identifier block expression_statement call attribute attribute identifier identifier identifier argument_list identifier for_statement identifier call attribute attribute identifier identifier identifier argument_list keyword_argument identifier string string_start string_content string_end keyword_argument identifier list string string_start string_content string_end string string_start string_content string_end string string_start string_content string_end block expression_statement call attribute attribute identifier identifier identifier argument_list identifier expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list keyword_argument identifier string string_start string_content string_end keyword_argument identifier string string_start string_content string_end expression_statement call attribute attribute identifier identifier identifier argument_list identifier
Adds PII model permissions.
def trigger_streamer(self, index): self._logger.debug("trigger_streamer RPC called on streamer %d", index) if index >= len(self.graph.streamers): return _pack_sgerror(SensorGraphError.STREAMER_NOT_ALLOCATED) if index in self._stream_manager.in_progress(): return _pack_sgerror(SensorGraphError.STREAM_ALREADY_IN_PROGRESS) streamer = self.graph.streamers[index] if not streamer.triggered(manual=True): return _pack_sgerror(SensorGraphError.STREAMER_HAS_NO_NEW_DATA) self._logger.debug("calling mark_streamer on streamer %d from trigger_streamer RPC", index) self.graph.mark_streamer(index) self.process_streamers() return Error.NO_ERROR
module function_definition identifier parameters identifier identifier block expression_statement call attribute attribute identifier identifier identifier argument_list string string_start string_content string_end identifier if_statement comparison_operator identifier call identifier argument_list attribute attribute identifier identifier identifier block return_statement call identifier argument_list attribute identifier identifier if_statement comparison_operator identifier call attribute attribute identifier identifier identifier argument_list block return_statement call identifier argument_list attribute identifier identifier expression_statement assignment identifier subscript attribute attribute identifier identifier identifier identifier if_statement not_operator call attribute identifier identifier argument_list keyword_argument identifier true block return_statement call identifier argument_list attribute identifier identifier expression_statement call attribute attribute identifier identifier identifier argument_list string string_start string_content string_end identifier expression_statement call attribute attribute identifier identifier identifier argument_list identifier expression_statement call attribute identifier identifier argument_list return_statement attribute identifier identifier
Pass a streamer to the stream manager if it has data.
def _chk_fld(self, ntd, name, qty_min=0, qty_max=None): vals = getattr(ntd, name) num_vals = len(vals) if num_vals < qty_min: self.illegal_lines['MIN QTY'].append( (-1, "FIELD({F}): MIN QUANTITY({Q}) WASN'T MET: {V}".format(F=name, Q=qty_min, V=vals))) if qty_max is not None: if num_vals > qty_max: self.illegal_lines['MAX QTY'].append( (-1, "FIELD({F}): MAX QUANTITY({Q}) EXCEEDED: {V}\n{NT}".format( F=name, Q=qty_max, V=vals, NT=ntd)))
module function_definition identifier parameters identifier identifier identifier default_parameter identifier integer default_parameter identifier none block expression_statement assignment identifier call identifier argument_list identifier identifier expression_statement assignment identifier call identifier argument_list identifier if_statement comparison_operator identifier identifier block expression_statement call attribute subscript attribute identifier identifier string string_start string_content string_end identifier argument_list tuple unary_operator integer call attribute string string_start string_content string_end identifier argument_list keyword_argument identifier identifier keyword_argument identifier identifier keyword_argument identifier identifier if_statement comparison_operator identifier none block if_statement comparison_operator identifier identifier block expression_statement call attribute subscript attribute identifier identifier string string_start string_content string_end identifier argument_list tuple unary_operator integer call attribute string string_start string_content escape_sequence string_end identifier argument_list keyword_argument identifier identifier keyword_argument identifier identifier keyword_argument identifier identifier keyword_argument identifier identifier
Further split a GAF value within a single field.
def main(): dem = '../tests/data/Jamaica_dem.tif' num_proc = 2 wp = '../tests/data/tmp_results/wtsd_delineation' TauDEMWorkflow.watershed_delineation(num_proc, dem, workingdir=wp)
module function_definition identifier parameters block expression_statement assignment identifier string string_start string_content string_end expression_statement assignment identifier integer expression_statement assignment identifier string string_start string_content string_end expression_statement call attribute identifier identifier argument_list identifier identifier keyword_argument identifier identifier
The simplest usage of watershed delineation based on TauDEM.
def write(self): if self.path is None: raise Exception('Scrim.path is None') dirname = os.path.dirname(os.path.abspath(self.path)) if not os.path.exists(dirname): try: os.makedirs(dirname) except: raise OSError('Failed to create root for scrim output.') with open(self.path, 'w') as f: f.write(self.to_string())
module function_definition identifier parameters identifier block if_statement comparison_operator attribute identifier identifier none block raise_statement call identifier argument_list string string_start string_content string_end expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list call attribute attribute identifier identifier identifier argument_list attribute identifier identifier if_statement not_operator call attribute attribute identifier identifier identifier argument_list identifier block try_statement block expression_statement call attribute identifier identifier argument_list identifier except_clause block raise_statement call identifier argument_list string string_start string_content string_end with_statement with_clause with_item as_pattern call identifier argument_list attribute identifier identifier string string_start string_content string_end as_pattern_target identifier block expression_statement call attribute identifier identifier argument_list call attribute identifier identifier argument_list
Write this Scrims commands to its path
def mfcc(wav_path): (rate, sig) = wav.read(wav_path) feat = python_speech_features.mfcc(sig, rate, appendEnergy=True) delta_feat = python_speech_features.delta(feat, 2) all_feats = [feat, delta_feat] all_feats = np.array(all_feats) all_feats = np.swapaxes(all_feats, 0, 1) all_feats = np.swapaxes(all_feats, 1, 2) feat_fn = wav_path[:-3] + "mfcc13_d.npy" np.save(feat_fn, all_feats)
module function_definition identifier parameters identifier block expression_statement assignment tuple_pattern identifier identifier call attribute identifier identifier argument_list identifier expression_statement assignment identifier call attribute identifier identifier argument_list identifier identifier keyword_argument identifier true expression_statement assignment identifier call attribute identifier identifier argument_list identifier integer expression_statement assignment identifier list identifier identifier expression_statement assignment identifier call attribute identifier identifier argument_list identifier expression_statement assignment identifier call attribute identifier identifier argument_list identifier integer integer expression_statement assignment identifier call attribute identifier identifier argument_list identifier integer integer expression_statement assignment identifier binary_operator subscript identifier slice unary_operator integer string string_start string_content string_end expression_statement call attribute identifier identifier argument_list identifier identifier
Grabs MFCC features with energy and derivates.
def _load_start_paths(self): " Start the Read-Eval-Print Loop. " if self._startup_paths: for path in self._startup_paths: if os.path.exists(path): with open(path, 'rb') as f: code = compile(f.read(), path, 'exec') six.exec_(code, self.get_globals(), self.get_locals()) else: output = self.app.output output.write('WARNING | File not found: {}\n\n'.format(path))
module function_definition identifier parameters identifier block expression_statement string string_start string_content string_end if_statement attribute identifier identifier block for_statement identifier attribute identifier identifier block if_statement call attribute attribute identifier identifier identifier argument_list identifier block with_statement with_clause with_item as_pattern call identifier argument_list identifier string string_start string_content string_end as_pattern_target identifier block expression_statement assignment identifier call identifier argument_list call attribute identifier identifier argument_list identifier string string_start string_content string_end expression_statement call attribute identifier identifier argument_list identifier call attribute identifier identifier argument_list call attribute identifier identifier argument_list else_clause block expression_statement assignment identifier attribute attribute identifier identifier identifier expression_statement call attribute identifier identifier argument_list call attribute string string_start string_content escape_sequence escape_sequence string_end identifier argument_list identifier
Start the Read-Eval-Print Loop.
def guard_assign(analysis): if not is_worksheet_context(): return False if not analysis.isSampleReceived(): return False if analysis.getWorksheet(): return False return user_can_manage_worksheets()
module function_definition identifier parameters identifier block if_statement not_operator call identifier argument_list block return_statement false if_statement not_operator call attribute identifier identifier argument_list block return_statement false if_statement call attribute identifier identifier argument_list block return_statement false return_statement call identifier argument_list
Return whether the transition "assign" can be performed or not
def delete_group_action(model, request): try: groups = model.parent.backend uid = model.model.name del groups[uid] groups() model.parent.invalidate() except Exception as e: return { 'success': False, 'message': str(e) } localizer = get_localizer(request) message = localizer.translate(_( 'deleted_group', default='Deleted group from database' )) return { 'success': True, 'message': message }
module function_definition identifier parameters identifier identifier block try_statement block expression_statement assignment identifier attribute attribute identifier identifier identifier expression_statement assignment identifier attribute attribute identifier identifier identifier delete_statement subscript identifier identifier expression_statement call identifier argument_list expression_statement call attribute attribute identifier identifier identifier argument_list except_clause as_pattern identifier as_pattern_target identifier block return_statement dictionary pair string string_start string_content string_end false pair string string_start string_content string_end call identifier argument_list identifier expression_statement assignment identifier call identifier argument_list identifier expression_statement assignment identifier call attribute identifier identifier argument_list call identifier argument_list string string_start string_content string_end keyword_argument identifier string string_start string_content string_end return_statement dictionary pair string string_start string_content string_end true pair string string_start string_content string_end identifier
Delete group from database.
def schedule(self, job, when): pjob = pickle.dumps(job) self._redis.zadd('ss:scheduled', when, pjob)
module function_definition identifier parameters identifier identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list identifier expression_statement call attribute attribute identifier identifier identifier argument_list string string_start string_content string_end identifier identifier
Schedule job to run at when nanoseconds since the UNIX epoch.
def _updateKW(image, filename, exten, skyKW, Value): image.header[skyKW] = Value if isinstance(exten,tuple): strexten = '[%s,%s]'%(exten[0],str(exten[1])) else: strexten = '[%s]'%(exten) log.info('Updating keyword %s in %s' % (skyKW, filename + strexten)) fobj = fileutil.openImage(filename, mode='update', memmap=False) fobj[exten].header[skyKW] = (Value, 'Sky value computed by AstroDrizzle') fobj.close()
module function_definition identifier parameters identifier identifier identifier identifier identifier block expression_statement assignment subscript attribute identifier identifier identifier identifier if_statement call identifier argument_list identifier identifier block expression_statement assignment identifier binary_operator string string_start string_content string_end tuple subscript identifier integer call identifier argument_list subscript identifier integer else_clause block expression_statement assignment identifier binary_operator string string_start string_content string_end parenthesized_expression identifier expression_statement call attribute identifier identifier argument_list binary_operator string string_start string_content string_end tuple identifier binary_operator identifier identifier expression_statement assignment identifier call attribute identifier identifier argument_list identifier keyword_argument identifier string string_start string_content string_end keyword_argument identifier false expression_statement assignment subscript attribute subscript identifier identifier identifier identifier tuple identifier string string_start string_content string_end expression_statement call attribute identifier identifier argument_list
update the header with the kw,value
def _maybe_reseed(self, normal): self._y += self._rate self._life -= 1 if self._life <= 0: self._clear = not self._clear if normal else True self._rate = randint(1, 2) if self._clear: self._y = 0 self._life = self._screen.height // self._rate else: self._y = randint(0, self._screen.height // 2) - \ self._screen.height // 4 self._life = \ randint(1, self._screen.height - self._y) // self._rate
module function_definition identifier parameters identifier identifier block expression_statement augmented_assignment attribute identifier identifier attribute identifier identifier expression_statement augmented_assignment attribute identifier identifier integer if_statement comparison_operator attribute identifier identifier integer block expression_statement assignment attribute identifier identifier conditional_expression not_operator attribute identifier identifier identifier true expression_statement assignment attribute identifier identifier call identifier argument_list integer integer if_statement attribute identifier identifier block expression_statement assignment attribute identifier identifier integer expression_statement assignment attribute identifier identifier binary_operator attribute attribute identifier identifier identifier attribute identifier identifier else_clause block expression_statement assignment attribute identifier identifier binary_operator call identifier argument_list integer binary_operator attribute attribute identifier identifier identifier integer line_continuation binary_operator attribute attribute identifier identifier identifier integer expression_statement assignment attribute identifier identifier line_continuation binary_operator call identifier argument_list integer binary_operator attribute attribute identifier identifier identifier attribute identifier identifier attribute identifier identifier
Randomly create a new column once this one is finished.
def log(self, *args, **kwargs): if self.verbose: print(' ' * self.depth, *args, **kwargs)
module function_definition identifier parameters identifier list_splat_pattern identifier dictionary_splat_pattern identifier block if_statement attribute identifier identifier block expression_statement call identifier argument_list binary_operator string string_start string_content string_end attribute identifier identifier list_splat identifier dictionary_splat identifier
Convenience function for printing indenting debug output.
def main(**options): configure_logging(log_all=options.get('log')) stdin_stream = click.get_text_stream('stdin') stdin_text = stdin_stream.read() click.echo(stdin_text) ci = find_ci_provider() config = Config(options, ci=ci) build = LintlyBuild(config, stdin_text) try: build.execute() except NotPullRequestException: logger.info('Not a PR. Lintly is exiting.') sys.exit(0) sys.exit(len(build.violations))
module function_definition identifier parameters dictionary_splat_pattern identifier block expression_statement call identifier argument_list keyword_argument identifier call attribute identifier identifier argument_list string string_start string_content string_end expression_statement assignment identifier call attribute identifier identifier argument_list string string_start string_content string_end expression_statement assignment identifier call attribute identifier identifier argument_list expression_statement call attribute identifier identifier argument_list identifier expression_statement assignment identifier call identifier argument_list expression_statement assignment identifier call identifier argument_list identifier keyword_argument identifier identifier expression_statement assignment identifier call identifier argument_list identifier identifier try_statement block expression_statement call attribute identifier identifier argument_list except_clause identifier block expression_statement call attribute identifier identifier argument_list string string_start string_content string_end expression_statement call attribute identifier identifier argument_list integer expression_statement call attribute identifier identifier argument_list call identifier argument_list attribute identifier identifier
Slurp up linter output and send it to a GitHub PR review.
def to_row(advice): return [ advice.id, advice.administration, advice.type, advice.session.year, advice.session.strftime('%d/%m/%Y'), advice.subject, ', '.join(advice.topics), ', '.join(advice.tags), ', '.join(advice.meanings), ROMAN_NUMS.get(advice.part, ''), advice.content, ]
module function_definition identifier parameters identifier block return_statement list attribute identifier identifier attribute identifier identifier attribute identifier identifier attribute attribute identifier identifier identifier call attribute attribute identifier identifier identifier argument_list string string_start string_content string_end attribute identifier identifier call attribute string string_start string_content string_end identifier argument_list attribute identifier identifier call attribute string string_start string_content string_end identifier argument_list attribute identifier identifier call attribute string string_start string_content string_end identifier argument_list attribute identifier identifier call attribute identifier identifier argument_list attribute identifier identifier string string_start string_end attribute identifier identifier
Serialize an advice into a CSV row
def _TypecheckFunction(function, parent_type_check_dict, stack_location, self_name): type_check_dict = _CollectTypeChecks(function, parent_type_check_dict, stack_location + 1, self_name) if not type_check_dict: return function def TypecheckWrapper(*args, **kwargs): arg_dict = _CollectArguments(function, args, kwargs) errors = _ValidateArguments(arg_dict, type_check_dict) if errors: raise TypeError("\n".join(errors)) return_value = function(*args, **kwargs) errors = _ValidateReturnValue(return_value, type_check_dict) if errors: raise TypeError("\n".join(errors)) return return_value TypecheckWrapper.__doc__ = function.__doc__ TypecheckWrapper.__name__ = function.__name__ TypecheckWrapper.type_check_dict = type_check_dict TypecheckWrapper.wrapped_function = function return TypecheckWrapper
module function_definition identifier parameters identifier identifier identifier identifier block expression_statement assignment identifier call identifier argument_list identifier identifier binary_operator identifier integer identifier if_statement not_operator identifier block return_statement identifier function_definition identifier parameters list_splat_pattern identifier dictionary_splat_pattern identifier block expression_statement assignment identifier call identifier argument_list identifier identifier identifier expression_statement assignment identifier call identifier argument_list identifier identifier if_statement identifier block raise_statement call identifier argument_list call attribute string string_start string_content escape_sequence string_end identifier argument_list identifier expression_statement assignment identifier call identifier argument_list list_splat identifier dictionary_splat identifier expression_statement assignment identifier call identifier argument_list identifier identifier if_statement identifier block raise_statement call identifier argument_list call attribute string string_start string_content escape_sequence string_end identifier argument_list identifier return_statement identifier expression_statement assignment attribute identifier identifier attribute identifier identifier expression_statement assignment attribute identifier identifier attribute identifier identifier expression_statement assignment attribute identifier identifier identifier expression_statement assignment attribute identifier identifier identifier return_statement identifier
Decorator function to collect and execute type checks.
def visit_module(self, node, modname, modpath, package): node, doc = self._get_doc(node) newnode = nodes.Module( name=modname, doc=doc, file=modpath, path=[modpath], package=package, parent=None, ) newnode.postinit([self.visit(child, newnode) for child in node.body]) return newnode
module function_definition identifier parameters identifier identifier identifier identifier identifier block expression_statement assignment pattern_list identifier identifier call attribute identifier identifier argument_list identifier expression_statement assignment identifier call attribute identifier identifier argument_list keyword_argument identifier identifier keyword_argument identifier identifier keyword_argument identifier identifier keyword_argument identifier list identifier keyword_argument identifier identifier keyword_argument identifier none expression_statement call attribute identifier identifier argument_list list_comprehension call attribute identifier identifier argument_list identifier identifier for_in_clause identifier attribute identifier identifier return_statement identifier
visit a Module node by returning a fresh instance of it
def op(cls,text,*args,**kwargs): return cls.fn(text,*args,**kwargs)
module function_definition identifier parameters identifier identifier list_splat_pattern identifier dictionary_splat_pattern identifier block return_statement call attribute identifier identifier argument_list identifier list_splat identifier dictionary_splat identifier
This method must be overriden in derived classes
def ax(self): if self._ax is None: import matplotlib.pyplot as plt plt.figure() self._ax = plt.axes(projection=self._get_sample_projection()) return self._ax
module function_definition identifier parameters identifier block if_statement comparison_operator attribute identifier identifier none block import_statement aliased_import dotted_name identifier identifier identifier expression_statement call attribute identifier identifier argument_list expression_statement assignment attribute identifier identifier call attribute identifier identifier argument_list keyword_argument identifier call attribute identifier identifier argument_list return_statement attribute identifier identifier
Axes instance of the plot
def _validate_jpx_box_sequence(self, boxes): self._validate_label(boxes) self._validate_jpx_compatibility(boxes, boxes[1].compatibility_list) self._validate_singletons(boxes) self._validate_top_level(boxes)
module function_definition identifier parameters identifier identifier block expression_statement call attribute identifier identifier argument_list identifier expression_statement call attribute identifier identifier argument_list identifier attribute subscript identifier integer identifier expression_statement call attribute identifier identifier argument_list identifier expression_statement call attribute identifier identifier argument_list identifier
Run through series of tests for JPX box legality.
def client_list_entries(client, to_delete): for entry in client.list_entries(): do_something_with(entry) FILTER = "logName:log_name AND textPayload:simple" for entry in client.list_entries(filter_=FILTER): do_something_with(entry) from google.cloud.logging import DESCENDING for entry in client.list_entries(order_by=DESCENDING): do_something_with(entry) iterator = client.list_entries() pages = iterator.pages page1 = next(pages) for entry in page1: do_something_with(entry) page2 = next(pages) for entry in page2: do_something_with(entry)
module function_definition identifier parameters identifier identifier block for_statement identifier call attribute identifier identifier argument_list block expression_statement call identifier argument_list identifier expression_statement assignment identifier string string_start string_content string_end for_statement identifier call attribute identifier identifier argument_list keyword_argument identifier identifier block expression_statement call identifier argument_list identifier import_from_statement dotted_name identifier identifier identifier dotted_name identifier for_statement identifier call attribute identifier identifier argument_list keyword_argument identifier identifier block expression_statement call identifier argument_list identifier expression_statement assignment identifier call attribute identifier identifier argument_list expression_statement assignment identifier attribute identifier identifier expression_statement assignment identifier call identifier argument_list identifier for_statement identifier identifier block expression_statement call identifier argument_list identifier expression_statement assignment identifier call identifier argument_list identifier for_statement identifier identifier block expression_statement call identifier argument_list identifier
List entries via client.
def on_config(self, config): "Fetch the variables and functions" self._variables = config.get(YAML_SUBSET) module_reader.load_variables(self._variables, config) print("Variables:", self.variables)
module function_definition identifier parameters identifier identifier block expression_statement string string_start string_content string_end expression_statement assignment attribute identifier identifier call attribute identifier identifier argument_list identifier expression_statement call attribute identifier identifier argument_list attribute identifier identifier identifier expression_statement call identifier argument_list string string_start string_content string_end attribute identifier identifier
Fetch the variables and functions
def remove_forms(self, form_names): for form in form_names: try: self.parentApp.removeForm(form) except Exception as e: pass return
module function_definition identifier parameters identifier identifier block for_statement identifier identifier block try_statement block expression_statement call attribute attribute identifier identifier identifier argument_list identifier except_clause as_pattern identifier as_pattern_target identifier block pass_statement return_statement
Remove all forms supplied
def create_ellipse(width,height,angle): angle = angle / 180.0 * np.pi thetas = np.linspace(0,2*np.pi,200) a = width / 2.0 b = height / 2.0 x = a*np.cos(thetas)*np.cos(angle) - b*np.sin(thetas)*np.sin(angle) y = a*np.cos(thetas)*np.sin(angle) + b*np.sin(thetas)*np.cos(angle) z = np.zeros(thetas.shape) return np.vstack((x,y,z)).T
module function_definition identifier parameters identifier identifier identifier block expression_statement assignment identifier binary_operator binary_operator identifier float attribute identifier identifier expression_statement assignment identifier call attribute identifier identifier argument_list integer binary_operator integer attribute identifier identifier integer expression_statement assignment identifier binary_operator identifier float expression_statement assignment identifier binary_operator identifier float expression_statement assignment identifier binary_operator binary_operator binary_operator identifier call attribute identifier identifier argument_list identifier call attribute identifier identifier argument_list identifier binary_operator binary_operator identifier call attribute identifier identifier argument_list identifier call attribute identifier identifier argument_list identifier expression_statement assignment identifier binary_operator binary_operator binary_operator identifier call attribute identifier identifier argument_list identifier call attribute identifier identifier argument_list identifier binary_operator binary_operator identifier call attribute identifier identifier argument_list identifier call attribute identifier identifier argument_list identifier expression_statement assignment identifier call attribute identifier identifier argument_list attribute identifier identifier return_statement attribute call attribute identifier identifier argument_list tuple identifier identifier identifier identifier
Create parametric ellipse from 200 points.
def write_array(self, data): try: data.tofile(self._fh) except Exception: self._fh.write(data.tostring())
module function_definition identifier parameters identifier identifier block try_statement block expression_statement call attribute identifier identifier argument_list attribute identifier identifier except_clause identifier block expression_statement call attribute attribute identifier identifier identifier argument_list call attribute identifier identifier argument_list
Write numpy array to binary file.
def _parse_reverse_json(self, page, exactly_one=True): place = page.get('result') if not place: self._check_status(page.get('status')) return None location = place.get('formatted_address').encode('utf-8') latitude = place['location']['lat'] longitude = place['location']['lng'] location = Location(location, (latitude, longitude), place) if exactly_one: return location else: return [location]
module function_definition identifier parameters identifier identifier default_parameter identifier true block expression_statement assignment identifier call attribute identifier identifier argument_list string string_start string_content string_end if_statement not_operator identifier block expression_statement call attribute identifier identifier argument_list call attribute identifier identifier argument_list string string_start string_content string_end return_statement none expression_statement assignment identifier call attribute call attribute identifier identifier argument_list string string_start string_content string_end identifier argument_list string string_start string_content string_end expression_statement assignment identifier subscript subscript identifier string string_start string_content string_end string string_start string_content string_end expression_statement assignment identifier subscript subscript identifier string string_start string_content string_end string string_start string_content string_end expression_statement assignment identifier call identifier argument_list identifier tuple identifier identifier identifier if_statement identifier block return_statement identifier else_clause block return_statement list identifier
Parses a location from a single-result reverse API call.
def remove_getdisplay(field_name): str_ini = 'get_' str_end = '_display' if str_ini == field_name[0:len(str_ini)] and str_end == field_name[(-1) * len(str_end):]: field_name = field_name[len(str_ini):(-1) * len(str_end)] return field_name
module function_definition identifier parameters identifier block expression_statement assignment identifier string string_start string_content string_end expression_statement assignment identifier string string_start string_content string_end if_statement boolean_operator comparison_operator identifier subscript identifier slice integer call identifier argument_list identifier comparison_operator identifier subscript identifier slice binary_operator parenthesized_expression unary_operator integer call identifier argument_list identifier block expression_statement assignment identifier subscript identifier slice call identifier argument_list identifier binary_operator parenthesized_expression unary_operator integer call identifier argument_list identifier return_statement identifier
for string 'get_FIELD_NAME_display' return 'FIELD_NAME'
def with_partitions(self, partitions_to_add): new_metadata = ClusterMetadata(**self.config) new_metadata._brokers = copy.deepcopy(self._brokers) new_metadata._partitions = copy.deepcopy(self._partitions) new_metadata._broker_partitions = copy.deepcopy(self._broker_partitions) new_metadata._groups = copy.deepcopy(self._groups) new_metadata.internal_topics = copy.deepcopy(self.internal_topics) new_metadata.unauthorized_topics = copy.deepcopy(self.unauthorized_topics) for partition in partitions_to_add: new_metadata._partitions[partition.topic][partition.partition] = partition if partition.leader is not None and partition.leader != -1: new_metadata._broker_partitions[partition.leader].add( TopicPartition(partition.topic, partition.partition)) return new_metadata
module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call identifier argument_list dictionary_splat attribute identifier identifier expression_statement assignment attribute identifier identifier call attribute identifier identifier argument_list attribute identifier identifier expression_statement assignment attribute identifier identifier call attribute identifier identifier argument_list attribute identifier identifier expression_statement assignment attribute identifier identifier call attribute identifier identifier argument_list attribute identifier identifier expression_statement assignment attribute identifier identifier call attribute identifier identifier argument_list attribute identifier identifier expression_statement assignment attribute identifier identifier call attribute identifier identifier argument_list attribute identifier identifier expression_statement assignment attribute identifier identifier call attribute identifier identifier argument_list attribute identifier identifier for_statement identifier identifier block expression_statement assignment subscript subscript attribute identifier identifier attribute identifier identifier attribute identifier identifier identifier if_statement boolean_operator comparison_operator attribute identifier identifier none comparison_operator attribute identifier identifier unary_operator integer block expression_statement call attribute subscript attribute identifier identifier attribute identifier identifier identifier argument_list call identifier argument_list attribute identifier identifier attribute identifier identifier return_statement identifier
Returns a copy of cluster metadata with partitions added
def validate(obj, schema): if not framework.EvaluationContext.current().validate: return obj if hasattr(obj, 'tuple_schema'): obj.tuple_schema.validate(obj) if schema: schema.validate(obj) return obj
module function_definition identifier parameters identifier identifier block if_statement not_operator attribute call attribute attribute identifier identifier identifier argument_list identifier block return_statement identifier if_statement call identifier argument_list identifier string string_start string_content string_end block expression_statement call attribute attribute identifier identifier identifier argument_list identifier if_statement identifier block expression_statement call attribute identifier identifier argument_list identifier return_statement identifier
Validate an object according to its own AND an externally imposed schema.
def content(self): content_list = wrap_list(self._content_preprocessed) content_list.extend(self._content_stash) content_to_render = '\n'.join(content_list) return typogrify(self.content_renderer.render(content_to_render, self.format))
module function_definition identifier parameters identifier block expression_statement assignment identifier call identifier argument_list attribute identifier identifier expression_statement call attribute identifier identifier argument_list attribute identifier identifier expression_statement assignment identifier call attribute string string_start string_content escape_sequence string_end identifier argument_list identifier return_statement call identifier argument_list call attribute attribute identifier identifier identifier argument_list identifier attribute identifier identifier
The post's content in HTML format.
def wrap_async(func): @functools.wraps(func) def wrapped(*args, **kwargs): fut = asyncio.ensure_future(func(*args, **kwargs)) cur = greenlet.getcurrent() def callback(fut): try: cur.switch(fut.result()) except BaseException as e: cur.throw(e) fut.add_done_callback(callback) return cur.parent.switch() return wrapped
module function_definition identifier parameters identifier block decorated_definition decorator call attribute identifier identifier argument_list identifier function_definition identifier parameters list_splat_pattern identifier dictionary_splat_pattern identifier block expression_statement assignment identifier call attribute identifier identifier argument_list call identifier argument_list list_splat identifier dictionary_splat identifier expression_statement assignment identifier call attribute identifier identifier argument_list function_definition identifier parameters identifier block try_statement block expression_statement call attribute identifier identifier argument_list call attribute identifier identifier argument_list except_clause as_pattern identifier as_pattern_target identifier block expression_statement call attribute identifier identifier argument_list identifier expression_statement call attribute identifier identifier argument_list identifier return_statement call attribute attribute identifier identifier identifier argument_list return_statement identifier
Wraps an asynchronous function into a synchronous function.
def compare_numpy_dict(a, b, exact=True): if type(a) != type(b) and type(a) != np.ndarray and type(b) != np.ndarray: return False if type(a) == dict and type(b) == dict: if not a.keys() == b.keys(): return False for key in a.keys(): res = compare_numpy_dict(a[key], b[key], exact) if res == False: print("false for key = ", key) return False return True if type(a) == np.ndarray or type(b) == np.ndarray: if exact: return (a == b).all() else: return np.testing.assert_almost_equal(a, b) if a is None and b is None: return True raise NotImplementedError
module function_definition identifier parameters identifier identifier default_parameter identifier true block if_statement boolean_operator boolean_operator comparison_operator call identifier argument_list identifier call identifier argument_list identifier comparison_operator call identifier argument_list identifier attribute identifier identifier comparison_operator call identifier argument_list identifier attribute identifier identifier block return_statement false if_statement boolean_operator comparison_operator call identifier argument_list identifier identifier comparison_operator call identifier argument_list identifier identifier block if_statement not_operator comparison_operator call attribute identifier identifier argument_list call attribute identifier identifier argument_list block return_statement false for_statement identifier call attribute identifier identifier argument_list block expression_statement assignment identifier call identifier argument_list subscript identifier identifier subscript identifier identifier identifier if_statement comparison_operator identifier false block expression_statement call identifier argument_list string string_start string_content string_end identifier return_statement false return_statement true if_statement boolean_operator comparison_operator call identifier argument_list identifier attribute identifier identifier comparison_operator call identifier argument_list identifier attribute identifier identifier block if_statement identifier block return_statement call attribute parenthesized_expression comparison_operator identifier identifier identifier argument_list else_clause block return_statement call attribute attribute identifier identifier identifier argument_list identifier identifier if_statement boolean_operator comparison_operator identifier none comparison_operator identifier none block return_statement true raise_statement identifier
Compare two recursive numpy dictionaries
def push(h, x): h.push(x) up(h, h.size()-1)
module function_definition identifier parameters identifier identifier block expression_statement call attribute identifier identifier argument_list identifier expression_statement call identifier argument_list identifier binary_operator call attribute identifier identifier argument_list integer
Push a new value into heap.
def userKicked(self, kickee, channel, kicker, message): self.dispatch('population', 'userKicked', kickee, channel, kicker, message)
module function_definition identifier parameters identifier identifier identifier identifier identifier block expression_statement call attribute identifier identifier argument_list string string_start string_content string_end string string_start string_content string_end identifier identifier identifier identifier
Called when I see another user get kicked.
def help_box(): style = wx.DEFAULT_DIALOG_STYLE | wx.RESIZE_BORDER dialog_box = wx.Dialog(None, wx.ID_ANY, HELP_TITLE, style=style, size=(620, 450)) html_widget = HtmlHelp(dialog_box, wx.ID_ANY) html_widget.page = build_help_html() dialog_box.ShowModal() dialog_box.Destroy()
module function_definition identifier parameters block expression_statement assignment identifier binary_operator attribute identifier identifier attribute identifier identifier expression_statement assignment identifier call attribute identifier identifier argument_list none attribute identifier identifier identifier keyword_argument identifier identifier keyword_argument identifier tuple integer integer expression_statement assignment identifier call identifier argument_list identifier attribute identifier identifier expression_statement assignment attribute identifier identifier call identifier argument_list expression_statement call attribute identifier identifier argument_list expression_statement call attribute identifier identifier argument_list
A simple HTML help dialog box using the distribution data files.
def _handler(func): "Decorate a command handler" def _wrapped(*a, **k): r = func(*a, **k) if r is None: r = 0 return r return staticmethod(_wrapped)
module function_definition identifier parameters identifier block expression_statement string string_start string_content string_end function_definition identifier parameters list_splat_pattern identifier dictionary_splat_pattern identifier block expression_statement assignment identifier call identifier argument_list list_splat identifier dictionary_splat identifier if_statement comparison_operator identifier none block expression_statement assignment identifier integer return_statement identifier return_statement call identifier argument_list identifier
Decorate a command handler
def backup(target_file, config=None): storm_ = get_storm_instance(config) try: storm_.backup(target_file) except Exception as error: print(get_formatted_message(str(error), 'error'), file=sys.stderr) sys.exit(1)
module function_definition identifier parameters identifier default_parameter identifier none block expression_statement assignment identifier call identifier argument_list identifier try_statement block expression_statement call attribute identifier identifier argument_list identifier except_clause as_pattern identifier as_pattern_target identifier block expression_statement call identifier argument_list call identifier argument_list call identifier argument_list identifier string string_start string_content string_end keyword_argument identifier attribute identifier identifier expression_statement call attribute identifier identifier argument_list integer
Backups the main ssh configuration into target file.
def sanitize_gff_file(gff_fname, in_memory=True, in_place=False): db = None if is_gff_db(gff_fname): db = gffutils.FeatureDB(gff_fname) else: if in_memory: db = gffutils.create_db(gff_fname, ":memory:", verbose=False) else: db = get_gff_db(gff_fname) if in_place: gff_out = gffwriter.GFFWriter(gff_fname, in_place=in_place) else: gff_out = gffwriter.GFFWriter(sys.stdout) sanitized_db = sanitize_gff_db(db) for gene_rec in sanitized_db.all_features(featuretype="gene"): gff_out.write_gene_recs(sanitized_db, gene_rec.id) gff_out.close()
module function_definition identifier parameters identifier default_parameter identifier true default_parameter identifier false block expression_statement assignment identifier none if_statement call identifier argument_list identifier block expression_statement assignment identifier call attribute identifier identifier argument_list identifier else_clause block if_statement identifier block expression_statement assignment identifier call attribute identifier identifier argument_list identifier string string_start string_content string_end keyword_argument identifier false else_clause block expression_statement assignment identifier call identifier argument_list identifier if_statement identifier block expression_statement assignment identifier call attribute identifier identifier argument_list identifier keyword_argument identifier identifier else_clause block expression_statement assignment identifier call attribute identifier identifier argument_list attribute identifier identifier expression_statement assignment identifier call identifier argument_list identifier for_statement identifier call attribute identifier identifier argument_list keyword_argument identifier string string_start string_content string_end block expression_statement call attribute identifier identifier argument_list identifier attribute identifier identifier expression_statement call attribute identifier identifier argument_list
Sanitize a GFF file.
def InstanceOf(cls, **kwargs): return Property(types=cls, load=cls.load, **kwargs)
module function_definition identifier parameters identifier dictionary_splat_pattern identifier block return_statement call identifier argument_list keyword_argument identifier identifier keyword_argument identifier attribute identifier identifier dictionary_splat identifier
A property that is an instance of `cls`.
def create_reward_encoder(): last_reward = tf.Variable(0, name="last_reward", trainable=False, dtype=tf.float32) new_reward = tf.placeholder(shape=[], dtype=tf.float32, name='new_reward') update_reward = tf.assign(last_reward, new_reward) return last_reward, new_reward, update_reward
module function_definition identifier parameters block expression_statement assignment identifier call attribute identifier identifier argument_list integer keyword_argument identifier string string_start string_content string_end keyword_argument identifier false keyword_argument identifier attribute identifier identifier expression_statement assignment identifier call attribute identifier identifier argument_list keyword_argument identifier list keyword_argument identifier attribute identifier identifier keyword_argument identifier string string_start string_content string_end expression_statement assignment identifier call attribute identifier identifier argument_list identifier identifier return_statement expression_list identifier identifier identifier
Creates TF ops to track and increment recent average cumulative reward.
def _read_config(self): try: self.config = self.componentmodel.find_one( {'name': self.uniquename}) except ServerSelectionTimeoutError: self.log("No database access! Check if mongodb is running " "correctly.", lvl=critical) if self.config: self.log("Configuration read.", lvl=verbose) else: self.log("No configuration found.", lvl=warn)
module function_definition identifier parameters identifier block try_statement block expression_statement assignment attribute identifier identifier call attribute attribute identifier identifier identifier argument_list dictionary pair string string_start string_content string_end attribute identifier identifier except_clause identifier block expression_statement call attribute identifier identifier argument_list concatenated_string string string_start string_content string_end string string_start string_content string_end keyword_argument identifier identifier if_statement attribute identifier identifier block expression_statement call attribute identifier identifier argument_list string string_start string_content string_end keyword_argument identifier identifier else_clause block expression_statement call attribute identifier identifier argument_list string string_start string_content string_end keyword_argument identifier identifier
Read this component's configuration from the database
def _run_raw(self, cmd, ignore_errors=False): result = os.system(cmd) if result != 0: if ignore_errors: self.log(f"command ({cmd}) failed.") assert False, "_run_raw failed"
module function_definition identifier parameters identifier identifier default_parameter identifier false block expression_statement assignment identifier call attribute identifier identifier argument_list identifier if_statement comparison_operator identifier integer block if_statement identifier block expression_statement call attribute identifier identifier argument_list string string_start string_content interpolation identifier string_content string_end assert_statement false string string_start string_content string_end
Runs command directly, skipping tmux interface
def _compute_acq_withGradients(self, x): means, stds, dmdxs, dsdxs = self.model.predict_withGradients(x) f_acqu = None df_acqu = None for m, s, dmdx, dsdx in zip(means, stds, dmdxs, dsdxs): f = -m + self.exploration_weight * s df = -dmdx + self.exploration_weight * dsdx if f_acqu is None: f_acqu = f df_acqu = df else: f_acqu += f df_acqu += df return f_acqu/(len(means)), df_acqu/(len(means))
module function_definition identifier parameters identifier identifier block expression_statement assignment pattern_list identifier identifier identifier identifier call attribute attribute identifier identifier identifier argument_list identifier expression_statement assignment identifier none expression_statement assignment identifier none for_statement pattern_list identifier identifier identifier identifier call identifier argument_list identifier identifier identifier identifier block expression_statement assignment identifier binary_operator unary_operator identifier binary_operator attribute identifier identifier identifier expression_statement assignment identifier binary_operator unary_operator identifier binary_operator attribute identifier identifier identifier if_statement comparison_operator identifier none block expression_statement assignment identifier identifier expression_statement assignment identifier identifier else_clause block expression_statement augmented_assignment identifier identifier expression_statement augmented_assignment identifier identifier return_statement expression_list binary_operator identifier parenthesized_expression call identifier argument_list identifier binary_operator identifier parenthesized_expression call identifier argument_list identifier
Integrated GP-Lower Confidence Bound and its derivative
def node_insert_after(self, node, new_node): assert(not self.node_is_on_list(new_node)) assert(node is not new_node) next = self.node_next(node) assert(next is not None) self.node_set_next(node, new_node) self.node_set_prev(new_node, node) self.node_set_next(new_node, next) self.node_set_prev(next, new_node)
module function_definition identifier parameters identifier identifier identifier block assert_statement parenthesized_expression not_operator call attribute identifier identifier argument_list identifier assert_statement parenthesized_expression comparison_operator identifier identifier expression_statement assignment identifier call attribute identifier identifier argument_list identifier assert_statement parenthesized_expression comparison_operator identifier none expression_statement call attribute identifier identifier argument_list identifier identifier expression_statement call attribute identifier identifier argument_list identifier identifier expression_statement call attribute identifier identifier argument_list identifier identifier expression_statement call attribute identifier identifier argument_list identifier identifier
Insert the new node after node.
def convert2phylip(convert): out = '%s.phy' % (convert.rsplit('.', 1)[0]) if check(out) is False: convert = open(convert, 'rU') out_f = open(out, 'w') alignments = AlignIO.parse(convert, "fasta") AlignIO.write(alignments, out, "phylip") return out
module function_definition identifier parameters identifier block expression_statement assignment identifier binary_operator string string_start string_content string_end parenthesized_expression subscript call attribute identifier identifier argument_list string string_start string_content string_end integer integer if_statement comparison_operator call identifier argument_list identifier false block expression_statement assignment identifier call identifier argument_list identifier string string_start string_content string_end expression_statement assignment identifier call identifier argument_list identifier string string_start string_content string_end expression_statement assignment identifier call attribute identifier identifier argument_list identifier string string_start string_content string_end expression_statement call attribute identifier identifier argument_list identifier identifier string string_start string_content string_end return_statement identifier
convert fasta to phylip because RAxML is ridiculous
async def stop(self): if self._task is not None: self._task.cancel() self._task = None if self._state in [State.CONNECTING, State.CONNECTED]: lib.SSL_shutdown(self.ssl) try: await self._write_ssl() except ConnectionError: pass self.__log_debug('- DTLS shutdown complete')
module function_definition identifier parameters identifier block if_statement comparison_operator attribute identifier identifier none block expression_statement call attribute attribute identifier identifier identifier argument_list expression_statement assignment attribute identifier identifier none if_statement comparison_operator attribute identifier identifier list attribute identifier identifier attribute identifier identifier block expression_statement call attribute identifier identifier argument_list attribute identifier identifier try_statement block expression_statement await call attribute identifier identifier argument_list except_clause identifier block pass_statement expression_statement call attribute identifier identifier argument_list string string_start string_content string_end
Stop and close the DTLS transport.
async def main(): pyvlx = PyVLX('pyvlx.yaml') await pyvlx.load_devices() print(pyvlx.devices[1]) print(pyvlx.devices['Fenster 4']) await pyvlx.load_scenes() print(pyvlx.scenes[0]) print(pyvlx.scenes['Bath Closed']) await pyvlx.scenes[1].run() await pyvlx.disconnect()
module function_definition identifier parameters block expression_statement assignment identifier call identifier argument_list string string_start string_content string_end expression_statement await call attribute identifier identifier argument_list expression_statement call identifier argument_list subscript attribute identifier identifier integer expression_statement call identifier argument_list subscript attribute identifier identifier string string_start string_content string_end expression_statement await call attribute identifier identifier argument_list expression_statement call identifier argument_list subscript attribute identifier identifier integer expression_statement call identifier argument_list subscript attribute identifier identifier string string_start string_content string_end expression_statement await call attribute subscript attribute identifier identifier integer identifier argument_list expression_statement await call attribute identifier identifier argument_list
Load devices and scenes, run first scene.
def uniqueof20(k, rep=10000): alphabet = 'ACDEFGHIKLMNPQRSTVWY' reps = [len(set(random.choice(alphabet) for i in range(k))) for j in range(rep)] return sum(reps) / len(reps)
module function_definition identifier parameters identifier default_parameter identifier integer block expression_statement assignment identifier string string_start string_content string_end expression_statement assignment identifier list_comprehension call identifier argument_list call identifier generator_expression call attribute identifier identifier argument_list identifier for_in_clause identifier call identifier argument_list identifier for_in_clause identifier call identifier argument_list identifier return_statement binary_operator call identifier argument_list identifier call identifier argument_list identifier
Sample k times out of alphabet, how many different?
def validate_schema(schema_name): def decorator(f): @wraps(f) def wrapper(*args, **kw): instance = args[0] try: instance.validator(instance.schemas[schema_name]).validate(request.get_json()) except ValidationError, e: ret_dict = instance._create_ret_object(instance.FAILURE, None, True, instance.BAD_SCHEMA, e.message) instance.logger.error("Invalid Schema", ret_dict) return jsonify(ret_dict), 400 instance.logger.debug("Schema is valid") return f(*args, **kw) return wrapper return decorator
module function_definition identifier parameters identifier block function_definition identifier parameters identifier block decorated_definition decorator call identifier argument_list identifier function_definition identifier parameters list_splat_pattern identifier dictionary_splat_pattern identifier block expression_statement assignment identifier subscript identifier integer try_statement block expression_statement call attribute call attribute identifier identifier argument_list subscript attribute identifier identifier identifier identifier argument_list call attribute identifier identifier argument_list except_clause identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list attribute identifier identifier none true attribute identifier identifier attribute identifier identifier expression_statement call attribute attribute identifier identifier identifier argument_list string string_start string_content string_end identifier return_statement expression_list call identifier argument_list identifier integer expression_statement call attribute attribute identifier identifier identifier argument_list string string_start string_content string_end return_statement call identifier argument_list list_splat identifier dictionary_splat identifier return_statement identifier return_statement identifier
Validate the JSON against a required schema_name.
def watch_and_wait(self, poll_interval=10, idle_log_timeout=None, kill_on_timeout=False, stash_log_method=None, tag_instances=False, **kwargs): return wait_for_complete(self._job_queue, job_list=self.job_list, job_name_prefix=self.basename, poll_interval=poll_interval, idle_log_timeout=idle_log_timeout, kill_on_log_timeout=kill_on_timeout, stash_log_method=stash_log_method, tag_instances=tag_instances, **kwargs)
module function_definition identifier parameters identifier default_parameter identifier integer default_parameter identifier none default_parameter identifier false default_parameter identifier none default_parameter identifier false dictionary_splat_pattern identifier block return_statement call identifier argument_list attribute identifier identifier keyword_argument identifier attribute identifier identifier keyword_argument identifier attribute identifier identifier keyword_argument identifier identifier keyword_argument identifier identifier keyword_argument identifier identifier keyword_argument identifier identifier keyword_argument identifier identifier dictionary_splat identifier
This provides shortcut access to the wait_for_complete_function.
def output_datacenter(gandi, datacenter, output_keys, justify=14): output_generic(gandi, datacenter, output_keys, justify) if 'dc_name' in output_keys: output_line(gandi, 'datacenter', datacenter['name'], justify) if 'status' in output_keys: deactivate_at = datacenter.get('deactivate_at') if deactivate_at: output_line(gandi, 'closing on', deactivate_at.strftime('%d/%m/%Y'), justify) closing = [] iaas_closed_for = datacenter.get('iaas_closed_for') if iaas_closed_for == 'ALL': closing.append('vm') paas_closed_for = datacenter.get('paas_closed_for') if paas_closed_for == 'ALL': closing.append('paas') if closing: output_line(gandi, 'closed for', ', '.join(closing), justify)
module function_definition identifier parameters identifier identifier identifier default_parameter identifier integer block expression_statement call identifier argument_list identifier identifier identifier identifier if_statement comparison_operator string string_start string_content string_end identifier block expression_statement call identifier argument_list identifier string string_start string_content string_end subscript identifier string string_start string_content string_end identifier if_statement comparison_operator string string_start string_content string_end identifier block expression_statement assignment identifier call attribute identifier identifier argument_list string string_start string_content string_end if_statement identifier block expression_statement call identifier argument_list identifier string string_start string_content string_end call attribute identifier identifier argument_list string string_start string_content string_end identifier expression_statement assignment identifier list expression_statement assignment identifier call attribute identifier identifier argument_list string string_start string_content string_end if_statement comparison_operator identifier string string_start string_content string_end block expression_statement call attribute identifier identifier argument_list string string_start string_content string_end expression_statement assignment identifier call attribute identifier identifier argument_list string string_start string_content string_end if_statement comparison_operator identifier string string_start string_content string_end block expression_statement call attribute identifier identifier argument_list string string_start string_content string_end if_statement identifier block expression_statement call identifier argument_list identifier string string_start string_content string_end call attribute string string_start string_content string_end identifier argument_list identifier identifier
Helper to output datacenter information.
def package_contents(self): 'Returns a dictionary of file information' if self.contents_cache: return self.contents_cache files = self.zf.infolist() out_files = {} for file_ in files: file_doc = {'name': file_.filename, 'size': file_.file_size, 'name_lower': file_.filename.lower()} file_doc['extension'] = file_doc['name_lower'].split('.')[-1] out_files[file_.filename] = file_doc self.contents_cache = out_files return out_files
module function_definition identifier parameters identifier block expression_statement string string_start string_content string_end if_statement attribute identifier identifier block return_statement attribute identifier identifier expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list expression_statement assignment identifier dictionary for_statement identifier identifier block expression_statement assignment identifier dictionary pair string string_start string_content string_end attribute identifier identifier pair string string_start string_content string_end attribute identifier identifier pair string string_start string_content string_end call attribute attribute identifier identifier identifier argument_list expression_statement assignment subscript identifier string string_start string_content string_end subscript call attribute subscript identifier string string_start string_content string_end identifier argument_list string string_start string_content string_end unary_operator integer expression_statement assignment subscript identifier attribute identifier identifier identifier expression_statement assignment attribute identifier identifier identifier return_statement identifier
Returns a dictionary of file information
def clear(self): self.mark_incomplete() for suffix in list(CLIMATE_SEASON_SUFFIXES.values()): try: indicator = self.session.query(models.ClimateIndicator) \ .filter(models.ClimateIndicator.description == self.description + suffix) \ .one() self.session.delete(indicator) except NoResultFound: pass self.close_session()
module function_definition identifier parameters identifier block expression_statement call attribute identifier identifier argument_list for_statement identifier call identifier argument_list call attribute identifier identifier argument_list block try_statement block expression_statement assignment identifier call attribute call attribute call attribute attribute identifier identifier identifier argument_list attribute identifier identifier line_continuation identifier argument_list comparison_operator attribute attribute identifier identifier identifier binary_operator attribute identifier identifier identifier line_continuation identifier argument_list expression_statement call attribute attribute identifier identifier identifier argument_list identifier except_clause identifier block pass_statement expression_statement call attribute identifier identifier argument_list
Clear output of one climate variable
def parse_if(self): node = result = nodes.If(lineno=self.stream.expect('name:if').lineno) while 1: node.test = self.parse_tuple(with_condexpr=False) node.body = self.parse_statements(('name:elif', 'name:else', 'name:endif')) node.elif_ = [] node.else_ = [] token = next(self.stream) if token.test('name:elif'): node = nodes.If(lineno=self.stream.current.lineno) result.elif_.append(node) continue elif token.test('name:else'): result.else_ = self.parse_statements(('name:endif',), drop_needle=True) break return result
module function_definition identifier parameters identifier block expression_statement assignment identifier assignment identifier call attribute identifier identifier argument_list keyword_argument identifier attribute call attribute attribute identifier identifier identifier argument_list string string_start string_content string_end identifier while_statement integer block expression_statement assignment attribute identifier identifier call attribute identifier identifier argument_list keyword_argument identifier false expression_statement assignment attribute identifier identifier call attribute identifier identifier argument_list tuple string string_start string_content string_end string string_start string_content string_end string string_start string_content string_end expression_statement assignment attribute identifier identifier list expression_statement assignment attribute identifier identifier list expression_statement assignment identifier call identifier argument_list attribute identifier identifier if_statement call attribute identifier identifier argument_list string string_start string_content string_end block expression_statement assignment identifier call attribute identifier identifier argument_list keyword_argument identifier attribute attribute attribute identifier identifier identifier identifier expression_statement call attribute attribute identifier identifier identifier argument_list identifier continue_statement elif_clause call attribute identifier identifier argument_list string string_start string_content string_end block expression_statement assignment attribute identifier identifier call attribute identifier identifier argument_list tuple string string_start string_content string_end keyword_argument identifier true break_statement return_statement identifier
Parse an if construct.
def weeks_per_year(year): jan1 = jwday(gregorian.to_jd(year, 1, 1)) if jan1 == THU or (jan1 == WED and isleap(year)): return 53 else: return 52
module function_definition identifier parameters identifier block expression_statement assignment identifier call identifier argument_list call attribute identifier identifier argument_list identifier integer integer if_statement boolean_operator comparison_operator identifier identifier parenthesized_expression boolean_operator comparison_operator identifier identifier call identifier argument_list identifier block return_statement integer else_clause block return_statement integer
Number of ISO weeks in a year
def pipeline(names, steps): steps, times = zip(*map(_maybe_timed, steps)) fit_time = sum(times) if any(s is FIT_FAILURE for s in steps): fit_est = FIT_FAILURE else: fit_est = Pipeline(list(zip(names, steps))) return fit_est, fit_time
module function_definition identifier parameters identifier identifier block expression_statement assignment pattern_list identifier identifier call identifier argument_list list_splat call identifier argument_list identifier identifier expression_statement assignment identifier call identifier argument_list identifier if_statement call identifier generator_expression comparison_operator identifier identifier for_in_clause identifier identifier block expression_statement assignment identifier identifier else_clause block expression_statement assignment identifier call identifier argument_list call identifier argument_list call identifier argument_list identifier identifier return_statement expression_list identifier identifier
Reconstruct a Pipeline from names and steps
def save(self, filename=None, ignore_discard=False, ignore_expires=False): if filename is None: if self.filename is not None: filename = self.filename else: raise ValueError(cookiejar.MISSING_FILENAME_TEXT) go_cookies = [] now = time.time() for cookie in self: if not ignore_discard and cookie.discard: continue if not ignore_expires and cookie.is_expired(now): continue go_cookies.append(py_to_go_cookie(cookie)) with open(filename, "w") as f: f.write(json.dumps(go_cookies))
module function_definition identifier parameters identifier default_parameter identifier none default_parameter identifier false default_parameter identifier false block if_statement comparison_operator identifier none block if_statement comparison_operator attribute identifier identifier none block expression_statement assignment identifier attribute identifier identifier else_clause block raise_statement call identifier argument_list attribute identifier identifier expression_statement assignment identifier list expression_statement assignment identifier call attribute identifier identifier argument_list for_statement identifier identifier block if_statement boolean_operator not_operator identifier attribute identifier identifier block continue_statement if_statement boolean_operator not_operator identifier call attribute identifier identifier argument_list identifier block continue_statement expression_statement call attribute identifier identifier argument_list call identifier argument_list identifier with_statement with_clause with_item as_pattern call identifier argument_list identifier string string_start string_content string_end as_pattern_target identifier block expression_statement call attribute identifier identifier argument_list call attribute identifier identifier argument_list identifier
Implement the FileCookieJar abstract method.
def clear(self) -> None: self._best_so_far = None self._epochs_with_no_improvement = 0 self._is_best_so_far = True self._epoch_number = 0 self.best_epoch = None
module function_definition identifier parameters identifier type none block expression_statement assignment attribute identifier identifier none expression_statement assignment attribute identifier identifier integer expression_statement assignment attribute identifier identifier true expression_statement assignment attribute identifier identifier integer expression_statement assignment attribute identifier identifier none
Clears out the tracked metrics, but keeps the patience and should_decrease settings.
def wrap_conn(conn_func): def call(*args, **kwargs): try: conn = conn_func(*args, **kwargs) cursor_func = getattr(conn, CURSOR_WRAP_METHOD) wrapped = wrap_cursor(cursor_func) setattr(conn, cursor_func.__name__, wrapped) return conn except Exception: logging.warning('Fail to wrap conn, mysql not traced.') return conn_func(*args, **kwargs) return call
module function_definition identifier parameters identifier block function_definition identifier parameters list_splat_pattern identifier dictionary_splat_pattern identifier block try_statement block expression_statement assignment identifier call identifier argument_list list_splat identifier dictionary_splat identifier expression_statement assignment identifier call identifier argument_list identifier identifier expression_statement assignment identifier call identifier argument_list identifier expression_statement call identifier argument_list identifier attribute identifier identifier identifier return_statement identifier except_clause identifier block expression_statement call attribute identifier identifier argument_list string string_start string_content string_end return_statement call identifier argument_list list_splat identifier dictionary_splat identifier return_statement identifier
Wrap the mysql conn object with TraceConnection.
def interp(x, xp, *args, **kwargs): return interpolate_1d(x, xp, *args, **kwargs)
module function_definition identifier parameters identifier identifier list_splat_pattern identifier dictionary_splat_pattern identifier block return_statement call identifier argument_list identifier identifier list_splat identifier dictionary_splat identifier
Wrap interpolate_1d for deprecated interp.
def num_tasks(self, work_spec_name): return self.num_finished(work_spec_name) + \ self.num_failed(work_spec_name) + \ self.registry.len(WORK_UNITS_ + work_spec_name)
module function_definition identifier parameters identifier identifier block return_statement binary_operator binary_operator call attribute identifier identifier argument_list identifier line_continuation call attribute identifier identifier argument_list identifier line_continuation call attribute attribute identifier identifier identifier argument_list binary_operator identifier identifier
Get the total number of work units for some work spec.
def transfers_complete(self): for transfer in self.transfers: if not transfer.is_complete: error = { 'errorcode': 4003, 'errormessage': 'You must complete transfer before logout.' } hellraiser(error)
module function_definition identifier parameters identifier block for_statement identifier attribute identifier identifier block if_statement not_operator attribute identifier identifier block expression_statement assignment identifier dictionary pair string string_start string_content string_end integer pair string string_start string_content string_end string string_start string_content string_end expression_statement call identifier argument_list identifier
Check if all transfers are completed.
def ExecuteQuery(self, query, args=None): def Action(connection): connection.cursor.execute(query, args) rowcount = connection.cursor.rowcount results = connection.cursor.fetchall() return results, rowcount return self._RetryWrapper(Action)
module function_definition identifier parameters identifier identifier default_parameter identifier none block function_definition identifier parameters identifier block expression_statement call attribute attribute identifier identifier identifier argument_list identifier identifier expression_statement assignment identifier attribute attribute identifier identifier identifier expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list return_statement expression_list identifier identifier return_statement call attribute identifier identifier argument_list identifier
Get connection from pool and execute query.
def __expand_limits(ax, limits, which='x'): if which == 'x': getter, setter = ax.get_xlim, ax.set_xlim elif which == 'y': getter, setter = ax.get_ylim, ax.set_ylim else: raise ValueError('invalid axis: {}'.format(which)) old_lims = getter() new_lims = list(limits) if np.isfinite(old_lims[0]): new_lims[0] = min(old_lims[0], limits[0]) if np.isfinite(old_lims[1]): new_lims[1] = max(old_lims[1], limits[1]) setter(new_lims)
module function_definition identifier parameters identifier identifier default_parameter identifier string string_start string_content string_end block if_statement comparison_operator identifier string string_start string_content string_end block expression_statement assignment pattern_list identifier identifier expression_list attribute identifier identifier attribute identifier identifier elif_clause comparison_operator identifier string string_start string_content string_end block expression_statement assignment pattern_list identifier identifier expression_list attribute identifier identifier attribute identifier identifier else_clause block raise_statement call identifier argument_list call attribute string string_start string_content string_end identifier argument_list identifier expression_statement assignment identifier call identifier argument_list expression_statement assignment identifier call identifier argument_list identifier if_statement call attribute identifier identifier argument_list subscript identifier integer block expression_statement assignment subscript identifier integer call identifier argument_list subscript identifier integer subscript identifier integer if_statement call attribute identifier identifier argument_list subscript identifier integer block expression_statement assignment subscript identifier integer call identifier argument_list subscript identifier integer subscript identifier integer expression_statement call identifier argument_list identifier
Helper function to expand axis limits
def sockets(self): return [Socket(self._device, i) for i in range(len(self.raw))]
module function_definition identifier parameters identifier block return_statement list_comprehension call identifier argument_list attribute identifier identifier identifier for_in_clause identifier call identifier argument_list call identifier argument_list attribute identifier identifier
Return socket objects of the socket control.
def _get_file(self, path, prepend=False): if prepend: path = os.path.join(self._dirname(), path) extracted = self._tar.extractfile(path) if extracted: return extracted raise DapFileError(('Could not read %s from %s, maybe it\'s a directory,' + 'bad link or the dap file is corrupted') % (path, self.basename))
module function_definition identifier parameters identifier identifier default_parameter identifier false block if_statement identifier block expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list call attribute identifier identifier argument_list identifier expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list identifier if_statement identifier block return_statement identifier raise_statement call identifier argument_list binary_operator parenthesized_expression binary_operator string string_start string_content escape_sequence string_end string string_start string_content string_end tuple identifier attribute identifier identifier
Extracts a file from dap to a file-like object
def create_highlight(self, artist): highlight = copy.copy(artist) highlight.set(color=self.highlight_color, mec=self.highlight_color, lw=self.highlight_width, mew=self.highlight_width) artist.axes.add_artist(highlight) return highlight
module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list identifier expression_statement call attribute identifier identifier argument_list keyword_argument identifier attribute identifier identifier keyword_argument identifier attribute identifier identifier keyword_argument identifier attribute identifier identifier keyword_argument identifier attribute identifier identifier expression_statement call attribute attribute identifier identifier identifier argument_list identifier return_statement identifier
Create a new highlight for the given artist.
def create_default_file(cls, data=None, mode=None): filepath = cls.get_default_filepath() if not filepath: return False filename = os.path.basename(filepath) config = read_file(get_data_path(), filename) data = data or {} for k, v in six.iteritems(data): v = v or "" config = re.sub( r"^(%(key)s) =[ ]*$" % {"key": k}, "%(key)s = %(value)s" % {"key": k, "value": v}, config, flags=re.MULTILINE, ) dirpath = os.path.dirname(filepath) if not os.path.exists(dirpath): os.makedirs(dirpath) with click.open_file(filepath, "w+") as f: f.write(config) if mode is not None: os.chmod(filepath, mode) return True
module function_definition identifier parameters identifier default_parameter identifier none default_parameter identifier none block expression_statement assignment identifier call attribute identifier identifier argument_list if_statement not_operator identifier block return_statement false expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list identifier expression_statement assignment identifier call identifier argument_list call identifier argument_list identifier expression_statement assignment identifier boolean_operator identifier dictionary for_statement pattern_list identifier identifier call attribute identifier identifier argument_list identifier block expression_statement assignment identifier boolean_operator identifier string string_start string_end expression_statement assignment identifier call attribute identifier identifier argument_list binary_operator string string_start string_content string_end dictionary pair string string_start string_content string_end identifier binary_operator string string_start string_content string_end dictionary pair string string_start string_content string_end identifier pair string string_start string_content string_end identifier identifier keyword_argument identifier attribute identifier identifier expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list identifier if_statement not_operator call attribute attribute identifier identifier identifier argument_list identifier block expression_statement call attribute identifier identifier argument_list identifier with_statement with_clause with_item as_pattern call attribute identifier identifier argument_list identifier string string_start string_content string_end as_pattern_target identifier block expression_statement call attribute identifier identifier argument_list identifier if_statement comparison_operator identifier none block expression_statement call attribute identifier identifier argument_list identifier identifier return_statement true
Create a config file and override data if specified.