sequence stringlengths 731 13.6k | docstring stringlengths 11 171 |
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(module
(function_definition
(function_name__execute_workflow) function_name__execute_workflow
(parameters
(identifier_cls) identifier_cls
(identifier_process_args) identifier_process_args
)parameters
(block
(expression_statement
(assignment
(pattern_list
... | Handles a single execution of a workflow |
(module
(function_definition
(function_name__read_next_timestep) function_name__read_next_timestep
(parameters
(identifier_self) identifier_self
(default_parameter
(identifier_ts) identifier_ts
(None) None
)default_parameter
)parameters
(block
(if_statement
... | copy next frame into timestep |
(module
(function_definition
(function_name_kernelDriverActive) function_name_kernelDriverActive
(parameters
(identifier_self) identifier_self
(identifier_interface) identifier_interface
)parameters
(block
(expression_statement
(assignment
(identifier_result) identi... | Tell whether a kernel driver is active on given interface number. |
(module
(function_definition
(function_name_clean_built) function_name_clean_built
(parameters
(identifier_outdir) identifier_outdir
)parameters
(block
(expression_statement
(call
(identifier_print) identifier_print
(argument_list
(string_"Removing t... | Removes all built files |
(module
(function_definition
(function_name_int32) function_name_int32
(parameters
(identifier_name) identifier_name
(identifier_description) identifier_description
(default_parameter
(identifier_default) identifier_default
(None) None
)default_parameter
)parameters... | Add an int32 parameter to be passed when instantiating this YAML file |
(module
(function_definition
(function_name__translate_stm) function_name__translate_stm
(parameters
(identifier_self) identifier_self
(identifier_oprnd1) identifier_oprnd1
(identifier_oprnd2) identifier_oprnd2
(identifier_oprnd3) identifier_oprnd3
)parameters
(block
(ass... | Return a formula representation of a STM instruction. |
(module
(function_definition
(function_name__get_analysis_type) function_name__get_analysis_type
(parameters
(typed_parameter
(identifier_analysis_types) identifier_analysis_types
(type
(generic_type
(identifier_List) identifier_List
(type_parameter
... | Determine the overall analysis type. |
(module
(function_definition
(function_name_fromDict) function_name_fromDict
(parameters
(identifier_cls) identifier_cls
(identifier_data) identifier_data
)parameters
(block
(expression_statement
(assignment
(identifier_obj) identifier_obj
(call
... | Fill this objects attributes from a dict for known properties. |
(module
(function_definition
(function_name__update_url_map) function_name__update_url_map
(parameters
(identifier_self) identifier_self
)parameters
(block
(if_statement
(identifier_HAS_WEBSOCKETS) identifier_HAS_WEBSOCKETS
(block
(expression_statement
... | Assemble any dynamic or configurable URLs |
(module
(function_definition
(function_name_vgadata) function_name_vgadata
(parameters
)parameters
(block
(if_statement
(call
(attribute
(attribute
(identifier_os) identifier_os
(identifier_path) identifier_path
)attribute
... | Get data about the graphics card. |
(module
(function_definition
(function_name_scan) function_name_scan
(parameters
(identifier_stream) identifier_stream
(default_parameter
(identifier_Loader) identifier_Loader
(identifier_Loader) identifier_Loader
)default_parameter
)parameters
(block
(expressio... | Scan a YAML stream and produce scanning tokens. |
(module
(function_definition
(function_name_unaccentuate) function_name_unaccentuate
(parameters
(identifier_s) identifier_s
)parameters
(block
(return_statement
(call
(attribute
(string_"") string_""
(identifier_join) identifier_join
)at... | Replace accentuated chars in string by their non accentuated equivalent. |
(module
(function_definition
(function_name_inc) function_name_inc
(parameters
(identifier_self) identifier_self
(list_splat_pattern
(identifier_args) identifier_args
)list_splat_pattern
(dictionary_splat_pattern
(identifier_kwargs) identifier_kwargs
)dictionary_s... | Atomically increment ``qfield`` by ``value`` |
(module
(function_definition
(function_name_manage_itstat) function_name_manage_itstat
(parameters
(identifier_self) identifier_self
)parameters
(block
(expression_statement
(assignment
(identifier_itst) identifier_itst
(call
(attribute
... | Compute, record, and display iteration statistics. |
(module
(function_definition
(function_name_count_entries) function_name_count_entries
(parameters
(identifier_self) identifier_self
(default_parameter
(identifier_table) identifier_table
(None) None
)default_parameter
)parameters
(block
(if_statement
(c... | How many rows in a table. |
(module
(function_definition
(function_name_print_most_common) function_name_print_most_common
(parameters
(identifier_counter) identifier_counter
(default_parameter
(identifier_number) identifier_number
(integer_5) integer_5
)default_parameter
(default_parameter
... | print the most common elements of a counter |
(module
(function_definition
(function_name_write_report) function_name_write_report
(parameters
(identifier_self) identifier_self
(default_parameter
(identifier_force) identifier_force
(False) False
)default_parameter
)parameters
(block
(expression_statement
... | Writes the report to a file. |
(module
(function_definition
(function_name_compute_node_sizes) function_name_compute_node_sizes
(parameters
(identifier_self) identifier_self
)parameters
(block
(if_statement
(comparison_operator
(call
(identifier_type) identifier_type
(argument_l... | Compute the node sizes. |
(module
(function_definition
(function_name_parsed_function_to_ast) function_name_parsed_function_to_ast
(parameters
(typed_parameter
(identifier_parsed) identifier_parsed
(type
(identifier_Parsed) identifier_Parsed
)type
)typed_parameter
(identifier_parsed_... | Create AST for top-level functions |
(module
(function_definition
(function_name_add_headers) function_name_add_headers
(parameters
(identifier_self) identifier_self
(identifier_app) identifier_app
)parameters
(block
(decorated_definition
(decorator
(attribute
(identifier_app) identifier_ap... | Inject headers after request |
(module
(function_definition
(function_name__to_dict) function_name__to_dict
(parameters
(identifier_self) identifier_self
)parameters
(block
(return_statement
(dictionary
(pair
(string_'auto_watering') string_'auto_watering'
(call
(i... | Method to build zone dict. |
(module
(function_definition
(function_name_priority_color) function_name_priority_color
(parameters
(identifier_self) identifier_self
(identifier_p_priority) identifier_p_priority
)parameters
(block
(function_definition
(function_name__str_to_dict) function_name__str_to_dict... | Returns a dict with priorities as keys and color numbers as value. |
(module
(function_definition
(function_name_from_dict) function_name_from_dict
(parameters
(typed_parameter
(identifier_d) identifier_d
(type
(identifier_dict) identifier_dict
)type
)typed_parameter
)parameters
(type
(string_'SimpleCompiler') string_... | Loads a SimpleCompiler from its dictionary-based description. |
(module
(function_definition
(function_name__get_py_loglevel) function_name__get_py_loglevel
(parameters
(identifier_lvl) identifier_lvl
)parameters
(block
(if_statement
(not_operator
(identifier_lvl) identifier_lvl
)not_operator
(block
(expressi... | Map log levels to strings |
(module
(function_definition
(function_name_transform) function_name_transform
(parameters
(identifier_self) identifier_self
(identifier_m) identifier_m
)parameters
(block
(if_statement
(not_operator
(comparison_operator
(call
(identifier_l... | Replace rectangle with its transformation by matrix m. |
(module
(function_definition
(function_name_guess_payload_class) function_name_guess_payload_class
(parameters
(identifier_self) identifier_self
(identifier_payload) identifier_payload
)parameters
(block
(expression_statement
(assignment
(identifier_t) identifier_t
... | ISOTP encodes the frame type in the first nibble of a frame. |
(module
(function_definition
(function_name__create_dll) function_name__create_dll
(parameters
(identifier_self) identifier_self
)parameters
(block
(expression_statement
(assignment
(attribute
(identifier_self) identifier_self
(identifier__dir) ide... | Create a dynamically-linked library implementing the simulation logic. |
(module
(function_definition
(function_name_build_duration) function_name_build_duration
(parameters
(identifier_self) identifier_self
)parameters
(block
(return_statement
(binary_operator
(call
(identifier_int) identifier_int
(argument_list
... | Return the difference between build and build_done states |
(module
(function_definition
(function_name_rename) function_name_rename
(parameters
(identifier_self) identifier_self
(identifier_name) identifier_name
)parameters
(block
(expression_statement
(call
(attribute
(attribute
(identifier_self) ... | Set the name of the machine. |
(module
(function_definition
(function_name__find_file) function_name__find_file
(parameters
(identifier_self) identifier_self
(identifier_needle) identifier_needle
(identifier_candidates) identifier_candidates
)parameters
(block
(for_statement
(identifier_candidate) id... | Find the first directory containing a given candidate file. |
(module
(function_definition
(function_name_add_kde_setting) function_name_add_kde_setting
(parameters
(identifier_key) identifier_key
(identifier_value) identifier_value
(identifier_data) identifier_data
)parameters
(block
(if_statement
(comparison_operator
(... | Add a KDE proxy setting value to data dictionary. |
(module
(function_definition
(function_name_conv_block) function_name_conv_block
(parameters
(identifier_inputs) identifier_inputs
(identifier_filters) identifier_filters
(identifier_dilation_rates_and_kernel_sizes) identifier_dilation_rates_and_kernel_sizes
(dictionary_splat_pattern
... | A block of standard 2d convolutions. |
(module
(function_definition
(function_name__optimize) function_name__optimize
(parameters
(identifier_self) identifier_self
(identifier_period) identifier_period
(identifier_tmpid) identifier_tmpid
(default_parameter
(identifier_use_gradient) identifier_use_gradient
(T... | Optimize the model for the given period & template |
(module
(function_definition
(function_name_login_user) function_name_login_user
(parameters
(identifier_self) identifier_self
(identifier_password) identifier_password
(dictionary_splat_pattern
(identifier_kwds) identifier_kwds
)dictionary_splat_pattern
)parameters
(bl... | This function handles the registration of the given user credentials in the database |
(module
(function_definition
(function_name_check_topics) function_name_check_topics
(parameters
(identifier_client) identifier_client
(identifier_req_topics) identifier_req_topics
)parameters
(block
(expression_statement
(call
(attribute
(identifier_cli... | Check for existence of provided topics in Kafka. |
(module
(function_definition
(function_name__view) function_name__view
(parameters
(identifier_self) identifier_self
(identifier_filepath) identifier_filepath
(identifier_format) identifier_format
)parameters
(block
(expression_statement
(assignment
(identifie... | Start the right viewer based on file format and platform. |
(module
(function_definition
(function_name_validate) function_name_validate
(parameters
(identifier_self) identifier_self
(identifier_value) identifier_value
(identifier_model_instance) identifier_model_instance
)parameters
(block
(if_statement
(not_operator
... | Use custom validation for when using a multiple countries field. |
(module
(function_definition
(function_name_cast) function_name_cast
(parameters
(identifier_self) identifier_self
(identifier_value) identifier_value
(default_parameter
(identifier_custom_formatters) identifier_custom_formatters
(None) None
)default_parameter
(de... | Cast value to schema type |
(module
(function_definition
(function_name_async_load_parameters) function_name_async_load_parameters
(parameters
(identifier_self) identifier_self
)parameters
(block
(expression_statement
(assignment
(identifier_zones) identifier_zones
(await
(call... | Fetch area and zone info from SPC to initialize. |
(module
(function_definition
(function_name_loads) function_name_loads
(parameters
(identifier_astring) identifier_astring
)parameters
(block
(try_statement
(block
(return_statement
(call
(attribute
(identifier_pickle) identifier_... | Decompress and deserialize string into Python object via pickle. |
(module
(function_definition
(function_name__normalize_data_types) function_name__normalize_data_types
(parameters
(identifier_self) identifier_self
(identifier_strategy) identifier_strategy
)parameters
(block
(for_statement
(pattern_list
(identifier_k) identifier_k... | some contexts only retrieves strings, giving back right type |
(module
(function_definition
(function_name_eval_ast) function_name_eval_ast
(parameters
(identifier_self) identifier_self
(identifier_ast) identifier_ast
)parameters
(block
(expression_statement
(assignment
(identifier_new_ast) identifier_new_ast
(call
... | Eval the ast, replacing symbols by their last value in the model. |
(module
(function_definition
(function_name_post) function_name_post
(parameters
(identifier_self) identifier_self
(identifier_url) identifier_url
(identifier_data) identifier_data
)parameters
(block
(expression_statement
(assignment
(identifier_headers) ident... | Send a HTTP POST request to a URL and return the result. |
(module
(function_definition
(function_name__is_interactive) function_name__is_interactive
(parameters
(identifier_self) identifier_self
)parameters
(block
(return_statement
(not_operator
(parenthesized_expression
(boolean_operator
(attribute
... | Prevent middlewares and orders to work outside live mode |
(module
(function_definition
(function_name_extract_deps) function_name_extract_deps
(parameters
(identifier_bundles) identifier_bundles
(default_parameter
(identifier_log) identifier_log
(None) None
)default_parameter
)parameters
(block
(function_definition
... | Extract the dependencies from the bundle and its sub-bundles. |
(module
(function_definition
(function_name_parse_fields) function_name_parse_fields
(parameters
(identifier_cls) identifier_cls
(identifier_formatter) identifier_formatter
)parameters
(block
(expression_statement
(string_"Returns the format fields otherwise raise exception")... | Returns the format fields otherwise raise exception |
(module
(function_definition
(function_name_denormalize_volume) function_name_denormalize_volume
(parameters
(identifier_volume) identifier_volume
)parameters
(block
(expression_statement
(assignment
(identifier_id) identifier_id
(call
(attribute
... | convert volume metadata from archivant to es format |
(module
(function_definition
(function_name_count_rows_distinct) function_name_count_rows_distinct
(parameters
(identifier_self) identifier_self
(identifier_table) identifier_table
(default_parameter
(identifier_cols) identifier_cols
(string_'*') string_'*'
)default_par... | Get the number distinct of rows in a particular table. |
(module
(function_definition
(function_name_describe) function_name_describe
(parameters
(identifier_self) identifier_self
(identifier_element) identifier_element
)parameters
(block
(if_statement
(parenthesized_expression
(comparison_operator
(identifier... | Return tasks or task_runs Panda describe. |
(module
(function_definition
(function_name_initialize) function_name_initialize
(parameters
)parameters
(block
(expression_statement
(assignment
(attribute
(identifier_NST) identifier_NST
(identifier_running) identifier_running
)attribute
... | Initializes the global NST instance with the current NST and begins tracking |
(module
(function_definition
(function_name_checkdiff) function_name_checkdiff
(parameters
(identifier_a) identifier_a
(identifier_b) identifier_b
(default_parameter
(identifier_sp) identifier_sp
(True) True
)default_parameter
)parameters
(block
(expressio... | take diff of a to b, apply to a, return the applied diff so external code can check it against b |
(module
(function_definition
(function_name_load_contexts_and_renderers) function_name_load_contexts_and_renderers
(parameters
(identifier_events) identifier_events
(identifier_mediums) identifier_mediums
)parameters
(block
(expression_statement
(assignment
(identif... | Given a list of events and mediums, load the context model data into the contexts of the events. |
(module
(function_definition
(function_name_within_n_sds) function_name_within_n_sds
(parameters
(identifier_n) identifier_n
(identifier_series) identifier_series
)parameters
(block
(expression_statement
(assignment
(identifier_z_score) identifier_z_score
... | Return true if all values in sequence are within n SDs |
(module
(function_definition
(function_name_validate_float) function_name_validate_float
(parameters
(identifier_cls) identifier_cls
(identifier_value) identifier_value
)parameters
(block
(if_statement
(not_operator
(call
(identifier_isinstance) identifi... | Note that int values are accepted. |
(module
(function_definition
(function_name_save) function_name_save
(parameters
(identifier_self) identifier_self
(identifier_incoming_stream) identifier_incoming_stream
(default_parameter
(identifier_size_limit) identifier_size_limit
(None) None
)default_parameter
... | Save file in the file system. |
(module
(function_definition
(function_name_parts) function_name_parts
(parameters
)parameters
(block
(expression_statement
(assignment
(identifier_parts) identifier_parts
(dictionary
(pair
(string_'Canon') string_'Canon'
(list_... | Returns the dictionary with the part as key and the contained book as indices. |
(module
(function_definition
(function_name__decimal_to_json) function_name__decimal_to_json
(parameters
(identifier_value) identifier_value
)parameters
(block
(if_statement
(call
(identifier_isinstance) identifier_isinstance
(argument_list
(identifi... | Coerce 'value' to a JSON-compatible representation. |
(module
(function_definition
(function_name_index) function_name_index
(parameters
(identifier_config) identifier_config
)parameters
(block
(expression_statement
(assignment
(identifier_client) identifier_client
(call
(identifier_Client) identifier_C... | Display group info in raw format. |
(module
(function_definition
(function_name_primary_key_attributes) function_name_primary_key_attributes
(parameters
(identifier_self) identifier_self
)parameters
(block
(if_statement
(comparison_operator
(attribute
(identifier_self) identifier_self
... | Get the names of the primary key attributes as a tuple |
(module
(function_definition
(function_name_pickColor) function_name_pickColor
(parameters
(identifier_self) identifier_self
)parameters
(block
(expression_statement
(assignment
(identifier_color) identifier_color
(call
(attribute
(iden... | Prompts the user to select a color for this button. |
(module
(function_definition
(function_name_imagetransformer_sep_channels_8l_tpu) function_name_imagetransformer_sep_channels_8l_tpu
(parameters
)parameters
(block
(expression_statement
(assignment
(identifier_hparams) identifier_hparams
(call
(identifier_... | Hparams for training imagetransformer on tpu. |
(module
(function_definition
(function_name_binary_size) function_name_binary_size
(parameters
(identifier_self) identifier_self
)parameters
(block
(return_statement
(parenthesized_expression
(binary_operator
(binary_operator
(binary_operator
... | Return the number of bytes needed to store this parameter. |
(module
(function_definition
(function_name_responseInColor) function_name_responseInColor
(parameters
(identifier_request) identifier_request
(identifier_status) identifier_status
(identifier_headers) identifier_headers
(default_parameter
(identifier_prefix) identifier_prefix
... | Prints the response info in color |
(module
(function_definition
(function_name_coerce) function_name_coerce
(parameters
(identifier_cls) identifier_cls
(identifier_key) identifier_key
(identifier_value) identifier_value
)parameters
(block
(expression_statement
(assignment
(identifier_self) iden... | Convert plain list to MutationList |
(module
(function_definition
(function_name_mcast_sender) function_name_mcast_sender
(parameters
(default_parameter
(identifier_mcgroup) identifier_mcgroup
(identifier_MC_GROUP) identifier_MC_GROUP
)default_parameter
)parameters
(block
(expression_statement
(a... | Non-object interface for sending multicast messages. |
(module
(function_definition
(function_name_get) function_name_get
(parameters
(identifier_orcid_id) identifier_orcid_id
)parameters
(block
(expression_statement
(assignment
(identifier_resp) identifier_resp
(call
(attribute
(identifier... | Get an author based on an ORCID identifier. |
(module
(function_definition
(function_name_get) function_name_get
(parameters
)parameters
(block
(expression_statement
(call
(attribute
(identifier_LOG) identifier_LOG
(identifier_debug) identifier_debug
)attribute
(argument_list
... | Return list of Scheduling Blocks Instances known to SDP . |
(module
(function_definition
(function_name_scatter) function_name_scatter
(parameters
(identifier_slope) identifier_slope
(identifier_zero) identifier_zero
(identifier_x1) identifier_x1
(identifier_x2) identifier_x2
(default_parameter
(identifier_x1err) identifier_x1err
... | Used mainly to measure scatter for the BCES best-fit |
(module
(function_definition
(function_name_left_to_right) function_name_left_to_right
(parameters
(identifier_self) identifier_self
)parameters
(block
(expression_statement
(augmented_assignment
(attribute
(identifier_self) identifier_self
(identi... | This is for text that flows Left to Right |
(module
(function_definition
(function_name_clean) function_name_clean
(parameters
(identifier_self) identifier_self
(identifier_value) identifier_value
)parameters
(block
(if_statement
(not_operator
(identifier_value) identifier_value
)not_operator
... | Call the form is_valid to ensure every value supplied is valid |
(module
(function_definition
(function_name_validate_description) function_name_validate_description
(parameters
(identifier_xml_data) identifier_xml_data
)parameters
(block
(try_statement
(block
(expression_statement
(assignment
(identifier_root... | Validate the description for validity |
(module
(function_definition
(function_name_to_rst) function_name_to_rst
(parameters
(identifier_cls) identifier_cls
)parameters
(type
(identifier_str) identifier_str
)type
(block
(expression_statement
(assignment
(identifier_sep_line) identifier_sep_line
... | Output the registry as reStructuredText, for documentation. |
(module
(function_definition
(function_name__build_strain_specific_model) function_name__build_strain_specific_model
(parameters
(identifier_self) identifier_self
(identifier_strain_id) identifier_strain_id
(identifier_ref_functional_genes) identifier_ref_functional_genes
(identifier_o... | Create strain GEMPRO, set functional genes |
(module
(function_definition
(function_name_location) function_name_location
(parameters
(identifier_self) identifier_self
)parameters
(block
(try_statement
(block
(return_statement
(call
(attribute
(call
(attrib... | Return the location of the printer. |
(module
(function_definition
(function_name_to_api) function_name_to_api
(parameters
(identifier_in_dict) identifier_in_dict
(default_parameter
(identifier_int_keys) identifier_int_keys
(None) None
)default_parameter
(default_parameter
(identifier_date_keys) ide... | Extends a given object for API Production. |
(module
(function_definition
(function_name_draw_graph) function_name_draw_graph
(parameters
(identifier_g) identifier_g
(default_parameter
(identifier_fmt) identifier_fmt
(string_'svg') string_'svg'
)default_parameter
(default_parameter
(identifier_prg) identif... | Draw an RDF graph as an image |
(module
(function_definition
(function_name_build_props) function_name_build_props
(parameters
(identifier_self) identifier_self
)parameters
(block
(expression_statement
(assignment
(identifier_props) identifier_props
(dictionary
)dictionary
)a... | Build the props dictionary. |
(module
(function_definition
(function_name_rmarkdown_draft) function_name_rmarkdown_draft
(parameters
(identifier_filename) identifier_filename
(identifier_template) identifier_template
(identifier_package) identifier_package
)parameters
(block
(if_statement
(call
... | create a draft rmarkdown file from an installed template |
(module
(function_definition
(function_name_create_data_types) function_name_create_data_types
(parameters
(identifier_self) identifier_self
)parameters
(block
(return_statement
(dictionary
(pair
(string_'Binary') string_'Binary'
(attribute
... | Map of standard playbook variable types to create method. |
(module
(function_definition
(function_name_niterations) function_name_niterations
(parameters
(identifier_self) identifier_self
)parameters
(block
(expression_statement
(assignment
(identifier_itercounter) identifier_itercounter
(attribute
(identifi... | The current number of iterations. |
(module
(function_definition
(function_name_refresh_data) function_name_refresh_data
(parameters
(identifier_self) identifier_self
)parameters
(block
(expression_statement
(assignment
(identifier_j) identifier_j
(call
(attribute
(call
... | Refresh data from Vera device. |
(module
(function_definition
(function_name_multi_keyword) function_name_multi_keyword
(parameters
(identifier_tokens) identifier_tokens
(identifier_keyword_parts) identifier_keyword_parts
)parameters
(block
(expression_statement
(assignment
(identifier_tokens) iden... | Match a case-insensitive keyword consisting of multiple tokens. |
(module
(function_definition
(function_name__generate_corpus_table) function_name__generate_corpus_table
(parameters
(identifier_self) identifier_self
(identifier_labels) identifier_labels
(identifier_ngrams) identifier_ngrams
)parameters
(block
(expression_statement
(a... | Returns an HTML table containing data on each corpus' n-grams. |
(module
(function_definition
(function_name_cancel) function_name_cancel
(parameters
(identifier_self) identifier_self
)parameters
(block
(expression_statement
(string_"tells libdbus you no longer care about the pending incoming message.") string_"tells libdbus you no longer care a... | tells libdbus you no longer care about the pending incoming message. |
(module
(function_definition
(function_name__validation_error) function_name__validation_error
(parameters
(identifier_prop) identifier_prop
(identifier_prop_type) identifier_prop_type
(identifier_prop_value) identifier_prop_value
(identifier_expected) identifier_expected
)paramete... | Default validation for updated properties |
(module
(function_definition
(function_name__dM) function_name__dM
(parameters
(identifier_self) identifier_self
(identifier_k) identifier_k
(identifier_t) identifier_t
(identifier_param) identifier_param
(identifier_M) identifier_M
(default_parameter
(identifier_ti... | Returns derivative of matrix exponential. |
(module
(function_definition
(function_name_parse_band_log) function_name_parse_band_log
(parameters
(identifier_self) identifier_self
(identifier_message) identifier_message
)parameters
(block
(if_statement
(boolean_operator
(comparison_operator
(string... | Process incoming logging messages from the service. |
(module
(function_definition
(function_name_sadd) function_name_sadd
(parameters
(identifier_self) identifier_self
(identifier_key) identifier_key
(identifier_member) identifier_member
(list_splat_pattern
(identifier_members) identifier_members
)list_splat_pattern
)pa... | Add one or more members to a set. |
(module
(function_definition
(function_name_fasta_stats) function_name_fasta_stats
(parameters
(identifier_self) identifier_self
)parameters
(block
(for_statement
(identifier_sample) identifier_sample
(attribute
(identifier_self) identifier_self
(identif... | Parse the lengths of all contigs for each sample, as well as the total GC% |
(module
(function_definition
(function_name_to_topojson) function_name_to_topojson
(parameters
(identifier_self) identifier_self
)parameters
(block
(expression_statement
(assignment
(identifier_topojson) identifier_topojson
(attribute
(identifier_sel... | Adds points and converts to topojson string. |
(module
(function_definition
(function_name_prt_data) function_name_prt_data
(parameters
(identifier_self) identifier_self
(identifier_name) identifier_name
(identifier_vals) identifier_vals
(default_parameter
(identifier_prt) identifier_prt
(attribute
(identi... | Print stats data in markdown style. |
(module
(function_definition
(function_name_logger) function_name_logger
(parameters
(identifier_self) identifier_self
)parameters
(block
(if_statement
(attribute
(identifier_self) identifier_self
(identifier__experiment) identifier__experiment
)attribut... | The logger of this organizer |
(module
(function_definition
(function_name_close_pages_for_specific_sm_id) function_name_close_pages_for_specific_sm_id
(parameters
(identifier_self) identifier_self
(identifier_sm_id) identifier_sm_id
)parameters
(block
(expression_statement
(assignment
(identifie... | Closes all tabs of the states editor for a specific sm_id |
(module
(function_definition
(function_name_hold_sync) function_name_hold_sync
(parameters
(identifier_self) identifier_self
)parameters
(block
(if_statement
(comparison_operator
(attribute
(identifier_self) identifier_self
(identifier__holding_syn... | Hold syncing any state until the outermost context manager exits |
(module
(function_definition
(function_name_build_unit_name) function_name_build_unit_name
(parameters
(identifier_dimensions) identifier_dimensions
)parameters
(block
(expression_statement
(assignment
(identifier_name) identifier_name
(string_'') string_''
... | Build the name of the unit from its dimensions. |
(module
(function_definition
(function_name_compute_intensity) function_name_compute_intensity
(parameters
(identifier_self) identifier_self
(identifier__cost_func) identifier__cost_func
)parameters
(block
(expression_statement
(call
(attribute
(identifi... | Evaluate cost function and compute intensity at this position |
(module
(function_definition
(function_name_update_websub) function_name_update_websub
(parameters
(identifier_self) identifier_self
(identifier_config) identifier_config
(identifier_hub) identifier_hub
)parameters
(block
(try_statement
(block
(expression_stat... | Update WebSub hub to know about this feed |
(module
(function_definition
(function_name_clean) function_name_clean
(parameters
(identifier_self) identifier_self
(identifier_value) identifier_value
)parameters
(block
(if_statement
(call
(identifier_isinstance) identifier_isinstance
(argument_list
... | Takes a Werkzeug FileStorage, returns the relative path. |
(module
(function_definition
(function_name_remove_on_change) function_name_remove_on_change
(parameters
(identifier_self) identifier_self
(identifier_attr) identifier_attr
(list_splat_pattern
(identifier_callbacks) identifier_callbacks
)list_splat_pattern
)parameters
(... | Remove a callback from this object |
(module
(function_definition
(function_name__get_nsymop) function_name__get_nsymop
(parameters
(identifier_self) identifier_self
)parameters
(block
(if_statement
(attribute
(identifier_self) identifier_self
(identifier_centrosymmetric) identifier_centrosymmetric... | Returns total number of symmetry operations. |
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