sequence
stringlengths
731
13.6k
docstring
stringlengths
11
171
(module (function_definition (function_name_unauthorized_view) function_name_unauthorized_view (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_url) identifier_url (binary_operator (attrib...
Prepare a Flash message and redirect to USER_UNAUTHORIZED_ENDPOINT
(module (function_definition (function_name_createReference) function_name_createReference (parameters (identifier_self) identifier_self (identifier_fromnode) identifier_fromnode (identifier_tonode) identifier_tonode (default_parameter (identifier_edge_data) identifier_edge_dat...
Create a reference from fromnode to tonode
(module (function_definition (function_name_mutate) function_name_mutate (parameters (identifier_self) identifier_self (identifier_node) identifier_node (identifier_index) identifier_index )parameters (block (assert_statement (comparison_operator (identifier_i...
Modify the For loop to evaluate to None
(module (function_definition (function_name_ensure_file) function_name_ensure_file (parameters (identifier_path) identifier_path )parameters (block (try_statement (block (expression_statement (assignment (identifier_exists) identifier_exists ...
Checks if file exists, if fails, tries to create file
(module (function_definition (function_name__get_url_doc) function_name__get_url_doc (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_resolver) identifier_resolver (call (identifier_get_re...
Return a list of URLs that map to this resource.
(module (function_definition (function_name_parse_band_status_update) function_name_parse_band_status_update (parameters (identifier_self) identifier_self (identifier_message) identifier_message )parameters (block (expression_statement (call (attribute (...
Process incoming status updates from the service.
(module (function_definition (function_name_process_request) function_name_process_request (parameters (identifier_self) identifier_self (identifier_request) identifier_request (identifier_client_address) identifier_client_address )parameters (block (expression_statement ...
Fork a new subprocess to process the request.
(module (function_definition (function_name_sort_common_members) function_name_sort_common_members (parameters )parameters (block (expression_statement (assignment (identifier_filename) identifier_filename (binary_operator (identifier_PREFIX) identifier_PR...
Sorts the keys and members
(module (function_definition (function_name_to_dict) function_name_to_dict (parameters (identifier_self) identifier_self )parameters (block (return_statement (dictionary (pair (string_"total") string_"total" (attribute (identifier_sel...
Attribute values to dict
(module (function_definition (function_name_diff) function_name_diff (parameters (identifier_file_) identifier_file_ (identifier_imports) identifier_imports )parameters (block (expression_statement (assignment (identifier_modules_not_imported) identifier_modules_not...
Display the difference between modules in a file and imported modules.
(module (function_definition (function_name_add_role) function_name_add_role (parameters (identifier_role) identifier_role (dictionary_splat_pattern (identifier_kwargs) identifier_kwargs )dictionary_splat_pattern )parameters (block (expression_statement (assignm...
Add a new role
(module (function_definition (function_name__create_save_scenario_action) function_name__create_save_scenario_action (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_icon) identifier_icon (call ...
Create action for save scenario dialog.
(module (function_definition (function_name_text_has_changed) function_name_text_has_changed (parameters (identifier_self) identifier_self (identifier_text) identifier_text )parameters (block (expression_statement (assignment (identifier_text) identifier_text ...
Line edit's text has changed
(module (function_definition (function_name_start) function_name_start (parameters (identifier_self) identifier_self )parameters (block (expression_statement (call (attribute (attribute (identifier_self) identifier_self (identifier_...
Increment current term, vote for herself & send vote requests
(module (function_definition (function_name_cycle_list) function_name_cycle_list (parameters (identifier_self) identifier_self (list_splat_pattern (identifier_args) identifier_args )list_splat_pattern )parameters (block (expression_statement (assignment ...
return the list of cycles contained if the dataset
(module (function_definition (function_name__guess_seqtype_from_file) function_name__guess_seqtype_from_file (parameters (identifier_handle) identifier_handle )parameters (block (expression_statement (string_"Guess the sequence type from the file's contents") string_"Guess the sequ...
Guess the sequence type from the file's contents
(module (function_definition (function_name_print_events) function_name_print_events (parameters (identifier_events) identifier_events )parameters (block (expression_statement (assignment (identifier_columns) identifier_columns (list (string_'Date') ...
Prints out the event log for a user
(module (function_definition (function_name_add_required_resources) function_name_add_required_resources (parameters (identifier_resources) identifier_resources )parameters (block (expression_statement (assignment (identifier_required) identifier_required (list ...
Add default or empty values for required resources referenced in CWL
(module (function_definition (function_name_train_model) function_name_train_model (parameters (identifier_model_folder) identifier_model_folder )parameters (block (expression_statement (call (attribute (identifier_os) identifier_os (identifier_chd...
Train the model in ``model_folder``.
(module (function_definition (function_name__crates_cache) function_name__crates_cache (parameters )parameters (type (identifier_str) identifier_str )type (block (return_statement (call (attribute (attribute (identifier_os) identifier_os ...
Return the path to the crates cache folder
(module (function_definition (function_name_connectTo) function_name_connectTo (parameters (identifier_self) identifier_self (identifier_remoteRouteName) identifier_remoteRouteName )parameters (block (expression_statement (assignment (attribute (identifi...
Set the name of the route which will be added to outgoing boxes.
(module (function_definition (function_name__crop_image) function_name__crop_image (parameters (identifier_image) identifier_image (default_parameter (identifier_left) identifier_left (integer_0) integer_0 )default_parameter (default_parameter (identifier_top) i...
Crop the border from the layout
(module (function_definition (function_name_publish) function_name_publish (parameters (identifier_self) identifier_self )parameters (block (try_statement (block (for_statement (identifier_collection) identifier_collection (call (attr...
Iterate over the scheduler collections and apply any actions found
(module (function_definition (function_name_query) function_name_query (parameters (identifier_self) identifier_self (dictionary_splat_pattern (identifier_options) identifier_options )dictionary_splat_pattern )parameters (block (if_statement (not_operator ...
Return an iterator for the given items.
(module (function_definition (function_name_run) function_name_run (parameters (identifier_self) identifier_self (default_parameter (identifier_order) identifier_order (None) None )default_parameter )parameters (block (for_statement (identifier_event) id...
self.runner must be present
(module (function_definition (function_name_json) function_name_json (parameters (identifier_self) identifier_self (default_parameter (identifier_dict) identifier_dict (None) None )default_parameter (default_parameter (identifier_indent) identifier_indent ...
Returns post JSON representation
(module (function_definition (function_name_clear_caches) function_name_clear_caches (parameters (identifier_self) identifier_self )parameters (block (expression_statement (call (attribute (attribute (identifier_self) identifier_self ...
Clear the mice and repertoire caches.
(module (function_definition (function_name__verbs_with_subjects) function_name__verbs_with_subjects (parameters (identifier_doc) identifier_doc )parameters (block (expression_statement (assignment (identifier_verb_subj) identifier_verb_subj (list )lis...
Given a spacy document return the verbs that have subjects
(module (function_definition (function_name_usb_info) function_name_usb_info (parameters (identifier_self) identifier_self )parameters (block (return_statement (call (identifier_UsbInformation) identifier_UsbInformation (argument_list (attribute ...
The camera's USB information.
(module (function_definition (function_name__domain_event_pmsuspend_cb) function_name__domain_event_pmsuspend_cb (parameters (identifier_conn) identifier_conn (identifier_domain) identifier_domain (identifier_reason) identifier_reason (identifier_opaque) identifier_opaque )paramete...
Domain suspend events handler
(module (function_definition (function_name_download) function_name_download (parameters (identifier_self) identifier_self (identifier_download_key) identifier_download_key (default_parameter (identifier_raise_exception_on_failure) identifier_raise_exception_on_failure (False...
Download the file represented by the download_key.
(module (function_definition (function_name_extern_store_bool) function_name_extern_store_bool (parameters (identifier_self) identifier_self (identifier_context_handle) identifier_context_handle (identifier_b) identifier_b )parameters (block (expression_statement (assig...
Given a context and _Bool, return a new Handle to represent the _Bool.
(module (function_definition (function_name_full_path) function_name_full_path (parameters (identifier_self) identifier_self )parameters (block (if_statement (call (attribute (call (identifier_Path) identifier_Path (argument_list ...
Return the full path to the file.
(module (function_definition (function_name_from_fs_path) function_name_from_fs_path (parameters (identifier_path) identifier_path )parameters (block (expression_statement (assignment (identifier_scheme) identifier_scheme (string_'file') string_'file' )a...
Returns a URI for the given filesystem path.
(module (function_definition (function_name__inference_tip_cached) function_name__inference_tip_cached (parameters (identifier_func) identifier_func (identifier_instance) identifier_instance (identifier_args) identifier_args (identifier_kwargs) identifier_kwargs (default_paramete...
Cache decorator used for inference tips
(module (function_definition (function_name_write) function_name_write (parameters (identifier_self) identifier_self (identifier_path) identifier_path )parameters (block (with_statement (with_clause (with_item (as_pattern (call ...
Save the metadata as json
(module (function_definition (function_name_xgroup_destroy) function_name_xgroup_destroy (parameters (identifier_self) identifier_self (identifier_stream) identifier_stream (identifier_group_name) identifier_group_name )parameters (block (expression_statement (assignmen...
Delete a consumer group
(module (function_definition (function_name_raise_errors) function_name_raise_errors (parameters (identifier_self) identifier_self (identifier_response) identifier_response )parameters (block (expression_statement (assignment (identifier_verb) identifier_verb ...
The innermost part - report errors by exceptions
(module (function_definition (function_name_check) function_name_check (parameters (identifier_self) identifier_self (identifier_action) identifier_action (default_parameter (identifier_page) identifier_page (None) None )default_parameter (default_parameter ...
Return ``True`` if the current user has permission on the page.
(module (function_definition (function_name__get_1f_sum_scans) function_name__get_1f_sum_scans (parameters (identifier_self) identifier_self (identifier_d) identifier_d (identifier_freq) identifier_freq )parameters (block (expression_statement (assignment (ide...
Sum counts in each frequency bin over 1f scans.
(module (function_definition (function_name_deserialize_subject_info) function_name_deserialize_subject_info (parameters (identifier_subject_info_xml_path) identifier_subject_info_xml_path )parameters (block (try_statement (block (with_statement (with_clause ...
Deserialize a SubjectInfo XML file to a PyXB object.
(module (function_definition (function_name_remove_reaction) function_name_remove_reaction (parameters (identifier_self) identifier_self (identifier_reaction) identifier_reaction )parameters (block (if_statement (comparison_operator (identifier_reaction) identifier_...
Remove reaction from model
(module (function_definition (function_name__contains_blinded_text) function_name__contains_blinded_text (parameters (identifier_stats_xml) identifier_stats_xml )parameters (block (expression_statement (assignment (identifier_tree) identifier_tree (call ...
Heuristic to determine whether the treebank has blinded texts or not
(module (function_definition (function_name_window_size) function_name_window_size (parameters (identifier_self) identifier_self (identifier_value) identifier_value )parameters (block (if_statement (parenthesized_expression (boolean_operator (boolean_ope...
Set private ``_window_size`` and reset ``_block_matcher``.
(module (function_definition (function_name__create_plot) function_name__create_plot (parameters (identifier_tumor) identifier_tumor (identifier_in_glob) identifier_in_glob (identifier_out_ext) identifier_out_ext (default_parameter (identifier_page) identifier_page (int...
Create an output plot for the given PDF in the images directory.
(module (function_definition (function_name_make_ns) function_name_make_ns (parameters (identifier_self) identifier_self (identifier_ns) identifier_ns )parameters (block (if_statement (attribute (identifier_self) identifier_self (identifier_namespace) iden...
Returns the `lazily` created template namespace.
(module (function_definition (function_name_init_tag_processors) function_name_init_tag_processors (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_register) identifier_register (attribute ...
Register the TagProcessors that are bundled with doxytag2zealdb.
(module (function_definition (function_name_copyFeatures) function_name_copyFeatures (parameters (identifier_self) identifier_self (identifier_featureSource) identifier_featureSource )parameters (block (if_statement (comparison_operator (identifier_featureSource) id...
Copy the features from this source
(module (function_definition (function_name_visit_GpxModel) function_name_visit_GpxModel (parameters (identifier_self) identifier_self (identifier_gpx_model) identifier_gpx_model (list_splat_pattern (identifier_args) identifier_args )list_splat_pattern (dictionary_splat_p...
Render a GPXModel as a single JSON structure.
(module (function_definition (function_name__get_cache_plus_key) function_name__get_cache_plus_key (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_key) identifier_key (call (identifier_ge...
Return a cache region plus key.
(module (function_definition (function_name_rexponweib) function_name_rexponweib (parameters (identifier_alpha) identifier_alpha (identifier_k) identifier_k (default_parameter (identifier_loc) identifier_loc (integer_0) integer_0 )default_parameter (default_parame...
Random exponentiated Weibull variates.
(module (function_definition (function_name_export_to_dict) function_name_export_to_dict (parameters (identifier_session) identifier_session (identifier_recursive) identifier_recursive (identifier_back_references) identifier_back_references (identifier_include_defaults) identifier_incl...
Exports databases and druid clusters to a dictionary
(module (function_definition (function_name_someoneKnownSeen) function_name_someoneKnownSeen (parameters (identifier_self) identifier_self (default_parameter (identifier_home) identifier_home (None) None )default_parameter (default_parameter (identifier_camera) ...
Return True if someone known has been seen
(module (function_definition (function_name_saveTopicPageDefinitionToFile) function_name_saveTopicPageDefinitionToFile (parameters (identifier_self) identifier_self (identifier_fname) identifier_fname )parameters (block (expression_statement (call (attribute ...
save the topic page definition to a file
(module (function_definition (function_name_remove_child) function_name_remove_child (parameters (identifier_self) identifier_self (identifier_child) identifier_child )parameters (block (assert_statement (call (identifier_isinstance) identifier_isinstance ...
Remove the term from this term's children.
(module (function_definition (function_name_send_config_set) function_name_send_config_set (parameters (identifier_self) identifier_self (default_parameter (identifier_config_commands) identifier_config_commands (None) None )default_parameter (default_parameter ...
IOS-XR requires you not exit from configuration mode.
(module (function_definition (function_name__CheckDatabaseEncoding) function_name__CheckDatabaseEncoding (parameters (identifier_cursor) identifier_cursor )parameters (block (expression_statement (assignment (identifier_cur_character_set) identifier_cur_character_set ...
Enforces a sane UTF-8 encoding for the database.
(module (function_definition (function_name__get_keys) function_name__get_keys (parameters (identifier_self) identifier_self (identifier_read) identifier_read (identifier_input_records) identifier_input_records )parameters (block (for_statement (identifier_i) identifier...
Generator that yields `KeyPress` objects from the input records.
(module (function_definition (function_name__choose_float_dtype) function_name__choose_float_dtype (parameters (identifier_dtype) identifier_dtype (identifier_has_offset) identifier_has_offset )parameters (block (if_statement (boolean_operator (comparison_operator ...
Return a float dtype that can losslessly represent `dtype` values.
(module (function_definition (function_name_generate_random_string) function_name_generate_random_string (parameters (default_parameter (identifier_length) identifier_length (integer_8) integer_8 )default_parameter )parameters (block (expression_statement (ass...
Generate a random string
(module (function_definition (function_name_phrase_replace) function_name_phrase_replace (parameters (identifier_self) identifier_self (identifier_replace_dict) identifier_replace_dict )parameters (block (function_definition (function_name_r) function_name_r (paramete...
Replace phrases with single token, mapping defined in replace_dict
(module (function_definition (function_name_parse_udiff) function_name_parse_udiff (parameters (identifier_diff) identifier_diff (default_parameter (identifier_patterns) identifier_patterns (None) None )default_parameter (default_parameter (identifier_parent) id...
Return a dictionary of matching lines.
(module (function_definition (function_name_parse_string) function_name_parse_string (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_word) identifier_word (string_'') string_'' )assignment ...
Tokenize a Fortran string.
(module (function_definition (function_name_exit_if_missing_graphviz) function_name_exit_if_missing_graphviz (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (tuple_pattern (identifier_out) identifier_out ...
Detect the presence of the dot utility to make a png graph.
(module (function_definition (function_name_hessian) function_name_hessian (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_result) identifier_result (call (attribute (identi...
Compute the hessian of the energy
(module (function_definition (function_name_extract_gzip) function_name_extract_gzip (parameters (identifier_archive) identifier_archive (identifier_compression) identifier_compression (identifier_cmd) identifier_cmd (identifier_verbosity) identifier_verbosity (identifier_interac...
Extract a GZIP archive with the gzip Python module.
(module (function_definition (function_name_match_all) function_name_match_all (parameters (identifier_d_SMEFT) identifier_d_SMEFT (default_parameter (identifier_parameters) identifier_parameters (None) None )default_parameter )parameters (block (expression_stat...
Match the SMEFT Warsaw basis onto the WET JMS basis.
(module (function_definition (function_name_file_to_attachment) function_name_file_to_attachment (parameters (identifier_filename) identifier_filename (default_parameter (identifier_filehandler) identifier_filehandler (None) None )default_parameter )parameters (block ...
Convert a file to attachment
(module (function_definition (function_name_print_statements) function_name_print_statements (parameters (identifier_self) identifier_self )parameters (block (expression_statement (call (attribute (identifier_logger) identifier_logger (identifier_i...
Print all extracted INDRA Statements.
(module (function_definition (function_name_unhandled_exception) function_name_unhandled_exception (parameters (identifier_self) identifier_self (typed_parameter (identifier_exception) identifier_exception (type (identifier_Exception) identifier_Exception )type ...
Flask.errorhandler when an exception wasn't correctly handled
(module (function_definition (function_name_countfiles) function_name_countfiles (parameters (identifier_path) identifier_path (default_parameter (identifier_recurse) identifier_recurse (False) False )default_parameter )parameters (block (if_statement (n...
Returns the number of files under the given directory path.
(module (function_definition (function_name__str_replace) function_name__str_replace (parameters (identifier_txt) identifier_txt )parameters (block (expression_statement (assignment (identifier_txt) identifier_txt (call (attribute (iden...
Makes a small text amenable to being used in a filename.
(module (function_definition (function_name__make_version) function_name__make_version (parameters (identifier_major) identifier_major (identifier_minor) identifier_minor (identifier_micro) identifier_micro (identifier_releaselevel) identifier_releaselevel (identifier_serial) ide...
Create a readable version string from version_info tuple components.
(module (function_definition (function_name_items2file) function_name_items2file (parameters (identifier_items) identifier_items (identifier_filename) identifier_filename (default_parameter (identifier_encoding) identifier_encoding (string_'utf-8') string_'utf-8' )defau...
json array to file, canonical json format
(module (function_definition (function_name_calc_core_bytes) function_name_calc_core_bytes (parameters (identifier_self) identifier_self )parameters (block (if_statement (comparison_operator (call (identifier_len) identifier_len (argument_list ...
Convert all used annotation fields into bytes to write
(module (function_definition (function_name__tokenize_chinese_chars) function_name__tokenize_chinese_chars (parameters (identifier_self) identifier_self (identifier_text) identifier_text )parameters (block (expression_statement (assignment (identifier_output) identi...
Adds whitespace around any CJK character.
(module (function_definition (function_name__has_y) function_name__has_y (parameters (identifier_self) identifier_self (identifier_kwargs) identifier_kwargs )parameters (block (return_statement (parenthesized_expression (boolean_operator (boolean_operato...
Returns True if y is explicitly defined in kwargs
(module (function_definition (function_name_check_rotation) function_name_check_rotation (parameters (identifier_rotation) identifier_rotation )parameters (block (if_statement (comparison_operator (identifier_rotation) identifier_rotation (identifier_ALLOWED_ROT...
checks rotation parameter if illegal value raises exception
(module (function_definition (function_name_prune_hashes) function_name_prune_hashes (parameters (identifier_self) identifier_self (identifier_hashes) identifier_hashes (identifier_list_type) identifier_list_type )parameters (block (expression_statement (assignment ...
Prune any hashes not in source resource or change list.
(module (function_definition (function_name_add_task) function_name_add_task (parameters (identifier_self) identifier_self (identifier_pid) identifier_pid )parameters (block (expression_statement (call (identifier__register_process_with_cgrulesengd) identifier__regi...
Add a process to the cgroups represented by this instance.
(module (function_definition (function_name_answered_by) function_name_answered_by (parameters (identifier_self) identifier_self (identifier_rec) identifier_rec )parameters (block (return_statement (boolean_operator (boolean_operator (comparison_operator...
Returns true if the question is answered by the record
(module (function_definition (function_name_visit_BoolOp) function_name_visit_BoolOp (parameters (identifier_self) identifier_self (typed_parameter (identifier_node) identifier_node (type (attribute (identifier_ast) identifier_ast (identifier_BoolO...
Recursively visit the operands and apply the operation on them.
(module (function_definition (function_name_completer_tokenize) function_name_completer_tokenize (parameters (identifier_cls) identifier_cls (identifier_value) identifier_value (default_parameter (identifier_min_length) identifier_min_length (integer_3) integer_3 )defau...
Quick and dirty tokenizer for completion suggester
(module (function_definition (function_name___generate_string) function_name___generate_string (parameters (identifier_length) identifier_length )parameters (block (return_statement (call (attribute (call (attribute (string_'') st...
Generate a string for password creation.
(module (function_definition (function_name_validate_headers) function_name_validate_headers (parameters (identifier_spec) identifier_spec (identifier_data) identifier_data )parameters (block (expression_statement (assignment (identifier_validated_data) identifier_v...
Validates headers data and creates the config objects
(module (function_definition (function_name_capture_heroku_database) function_name_capture_heroku_database (parameters (identifier_self) identifier_self )parameters (block (expression_statement (call (attribute (identifier_self) identifier_self (id...
Capture Heroku database backup.
(module (function_definition (function_name__get_bottom_line_color) function_name__get_bottom_line_color (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_color) identifier_color (subscript ...
Returns color rgb tuple of bottom line
(module (function_definition (function_name_apply) function_name_apply (parameters (identifier_self) identifier_self (identifier_matrix) identifier_matrix )parameters (block (expression_statement (assignment (identifier_view) identifier_view (subscript ...
Slices the supplied matrix and applies any transform bound to this window
(module (function_definition (function_name_average) function_name_average (parameters (identifier_var) identifier_var (identifier_key) identifier_key (identifier_N) identifier_N )parameters (block (global_statement (identifier_average_data) identifier_average_data ...
average over N points
(module (function_definition (function_name__load_root_directory) function_name__load_root_directory (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_kwargs) identifier_kwargs (call (attri...
Load root directory, which has a cid of 0
(module (function_definition (function_name_removeRnaQuantificationSet) function_name_removeRnaQuantificationSet (parameters (identifier_self) identifier_self )parameters (block (expression_statement (call (attribute (identifier_self) identifier_self ...
Removes an rnaQuantificationSet from this repo
(module (function_definition (function_name_image_data) function_name_image_data (parameters (default_parameter (identifier_verbose) identifier_verbose (False) False )default_parameter )parameters (block (global_statement (identifier__IMAGE_DATA) identifier__I...
Get the raw encoded image data, downloading it if necessary.
(module (function_definition (function_name_StoreStat) function_name_StoreStat (parameters (identifier_self) identifier_self (identifier_responses) identifier_responses )parameters (block (expression_statement (assignment (identifier_index) identifier_index ...
Stores stat entry in the flow's state.
(module (function_definition (function_name__get_sqs_conn) function_name__get_sqs_conn (parameters (identifier_profile) identifier_profile (default_parameter (identifier_region) identifier_region (None) None )default_parameter (default_parameter (identifier_key)...
Get a boto connection to SQS.
(module (function_definition (function_name_end_logging) function_name_end_logging (parameters (default_parameter (identifier_filename) identifier_filename (None) None )default_parameter )parameters (block (if_statement (attribute (identifier_logutil...
Close log file and restore system defaults.
(module (function_definition (function_name_append) function_name_append (parameters (identifier_self) identifier_self (identifier_text) identifier_text )parameters (block (expression_statement (assignment (identifier_cursor) identifier_cursor (call ...
Append line to the end
(module (function_definition (function_name_run) function_name_run (parameters (identifier_self) identifier_self )parameters (block (expression_statement (assignment (identifier_states) identifier_states (call (attribute (call ...
For each state in states file build url and download file
(module (function_definition (function_name__remove_single_line_import_comments) function_name__remove_single_line_import_comments (parameters (identifier_r) identifier_r )parameters (block (expression_statement (call (attribute (identifier_logging) identifier...
We previously used more groups for the import statements and named each group.
(module (function_definition (function_name_field_adaptors) function_name_field_adaptors (parameters (identifier_self) identifier_self )parameters (block (with_statement (with_clause (with_item (call (identifier_exception_logging) identifier_exce...
Returns a tuple of Fields for captured fields which need additional treatment.
(module (function_definition (function_name_pubmed_url) function_name_pubmed_url (parameters (default_parameter (identifier_args) identifier_args (subscript (attribute (identifier_sys) identifier_sys (identifier_argv) identifier_argv )attribute...
Get a publication URL via the command line using a PubMed ID or PubMed URL