sequence stringlengths 731 13.6k | docstring stringlengths 11 171 |
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(module
(function_definition
(function_name_unauthorized_view) function_name_unauthorized_view
(parameters
(identifier_self) identifier_self
)parameters
(block
(expression_statement
(assignment
(identifier_url) identifier_url
(binary_operator
(attrib... | Prepare a Flash message and redirect to USER_UNAUTHORIZED_ENDPOINT |
(module
(function_definition
(function_name_createReference) function_name_createReference
(parameters
(identifier_self) identifier_self
(identifier_fromnode) identifier_fromnode
(identifier_tonode) identifier_tonode
(default_parameter
(identifier_edge_data) identifier_edge_dat... | Create a reference from fromnode to tonode |
(module
(function_definition
(function_name_mutate) function_name_mutate
(parameters
(identifier_self) identifier_self
(identifier_node) identifier_node
(identifier_index) identifier_index
)parameters
(block
(assert_statement
(comparison_operator
(identifier_i... | Modify the For loop to evaluate to None |
(module
(function_definition
(function_name_ensure_file) function_name_ensure_file
(parameters
(identifier_path) identifier_path
)parameters
(block
(try_statement
(block
(expression_statement
(assignment
(identifier_exists) identifier_exists
... | Checks if file exists, if fails, tries to create file |
(module
(function_definition
(function_name__get_url_doc) function_name__get_url_doc
(parameters
(identifier_self) identifier_self
)parameters
(block
(expression_statement
(assignment
(identifier_resolver) identifier_resolver
(call
(identifier_get_re... | Return a list of URLs that map to this resource. |
(module
(function_definition
(function_name_parse_band_status_update) function_name_parse_band_status_update
(parameters
(identifier_self) identifier_self
(identifier_message) identifier_message
)parameters
(block
(expression_statement
(call
(attribute
(... | Process incoming status updates from the service. |
(module
(function_definition
(function_name_process_request) function_name_process_request
(parameters
(identifier_self) identifier_self
(identifier_request) identifier_request
(identifier_client_address) identifier_client_address
)parameters
(block
(expression_statement
... | Fork a new subprocess to process the request. |
(module
(function_definition
(function_name_sort_common_members) function_name_sort_common_members
(parameters
)parameters
(block
(expression_statement
(assignment
(identifier_filename) identifier_filename
(binary_operator
(identifier_PREFIX) identifier_PR... | Sorts the keys and members |
(module
(function_definition
(function_name_to_dict) function_name_to_dict
(parameters
(identifier_self) identifier_self
)parameters
(block
(return_statement
(dictionary
(pair
(string_"total") string_"total"
(attribute
(identifier_sel... | Attribute values to dict |
(module
(function_definition
(function_name_diff) function_name_diff
(parameters
(identifier_file_) identifier_file_
(identifier_imports) identifier_imports
)parameters
(block
(expression_statement
(assignment
(identifier_modules_not_imported) identifier_modules_not... | Display the difference between modules in a file and imported modules. |
(module
(function_definition
(function_name_add_role) function_name_add_role
(parameters
(identifier_role) identifier_role
(dictionary_splat_pattern
(identifier_kwargs) identifier_kwargs
)dictionary_splat_pattern
)parameters
(block
(expression_statement
(assignm... | Add a new role |
(module
(function_definition
(function_name__create_save_scenario_action) function_name__create_save_scenario_action
(parameters
(identifier_self) identifier_self
)parameters
(block
(expression_statement
(assignment
(identifier_icon) identifier_icon
(call
... | Create action for save scenario dialog. |
(module
(function_definition
(function_name_text_has_changed) function_name_text_has_changed
(parameters
(identifier_self) identifier_self
(identifier_text) identifier_text
)parameters
(block
(expression_statement
(assignment
(identifier_text) identifier_text
... | Line edit's text has changed |
(module
(function_definition
(function_name_start) function_name_start
(parameters
(identifier_self) identifier_self
)parameters
(block
(expression_statement
(call
(attribute
(attribute
(identifier_self) identifier_self
(identifier_... | Increment current term, vote for herself & send vote requests |
(module
(function_definition
(function_name_cycle_list) function_name_cycle_list
(parameters
(identifier_self) identifier_self
(list_splat_pattern
(identifier_args) identifier_args
)list_splat_pattern
)parameters
(block
(expression_statement
(assignment
... | return the list of cycles contained if the dataset |
(module
(function_definition
(function_name__guess_seqtype_from_file) function_name__guess_seqtype_from_file
(parameters
(identifier_handle) identifier_handle
)parameters
(block
(expression_statement
(string_"Guess the sequence type from the file's contents") string_"Guess the sequ... | Guess the sequence type from the file's contents |
(module
(function_definition
(function_name_print_events) function_name_print_events
(parameters
(identifier_events) identifier_events
)parameters
(block
(expression_statement
(assignment
(identifier_columns) identifier_columns
(list
(string_'Date') ... | Prints out the event log for a user |
(module
(function_definition
(function_name_add_required_resources) function_name_add_required_resources
(parameters
(identifier_resources) identifier_resources
)parameters
(block
(expression_statement
(assignment
(identifier_required) identifier_required
(list
... | Add default or empty values for required resources referenced in CWL |
(module
(function_definition
(function_name_train_model) function_name_train_model
(parameters
(identifier_model_folder) identifier_model_folder
)parameters
(block
(expression_statement
(call
(attribute
(identifier_os) identifier_os
(identifier_chd... | Train the model in ``model_folder``. |
(module
(function_definition
(function_name__crates_cache) function_name__crates_cache
(parameters
)parameters
(type
(identifier_str) identifier_str
)type
(block
(return_statement
(call
(attribute
(attribute
(identifier_os) identifier_os
... | Return the path to the crates cache folder |
(module
(function_definition
(function_name_connectTo) function_name_connectTo
(parameters
(identifier_self) identifier_self
(identifier_remoteRouteName) identifier_remoteRouteName
)parameters
(block
(expression_statement
(assignment
(attribute
(identifi... | Set the name of the route which will be added to outgoing boxes. |
(module
(function_definition
(function_name__crop_image) function_name__crop_image
(parameters
(identifier_image) identifier_image
(default_parameter
(identifier_left) identifier_left
(integer_0) integer_0
)default_parameter
(default_parameter
(identifier_top) i... | Crop the border from the layout |
(module
(function_definition
(function_name_publish) function_name_publish
(parameters
(identifier_self) identifier_self
)parameters
(block
(try_statement
(block
(for_statement
(identifier_collection) identifier_collection
(call
(attr... | Iterate over the scheduler collections and apply any actions found |
(module
(function_definition
(function_name_query) function_name_query
(parameters
(identifier_self) identifier_self
(dictionary_splat_pattern
(identifier_options) identifier_options
)dictionary_splat_pattern
)parameters
(block
(if_statement
(not_operator
... | Return an iterator for the given items. |
(module
(function_definition
(function_name_run) function_name_run
(parameters
(identifier_self) identifier_self
(default_parameter
(identifier_order) identifier_order
(None) None
)default_parameter
)parameters
(block
(for_statement
(identifier_event) id... | self.runner must be present |
(module
(function_definition
(function_name_json) function_name_json
(parameters
(identifier_self) identifier_self
(default_parameter
(identifier_dict) identifier_dict
(None) None
)default_parameter
(default_parameter
(identifier_indent) identifier_indent
... | Returns post JSON representation |
(module
(function_definition
(function_name_clear_caches) function_name_clear_caches
(parameters
(identifier_self) identifier_self
)parameters
(block
(expression_statement
(call
(attribute
(attribute
(identifier_self) identifier_self
... | Clear the mice and repertoire caches. |
(module
(function_definition
(function_name__verbs_with_subjects) function_name__verbs_with_subjects
(parameters
(identifier_doc) identifier_doc
)parameters
(block
(expression_statement
(assignment
(identifier_verb_subj) identifier_verb_subj
(list
)lis... | Given a spacy document return the verbs that have subjects |
(module
(function_definition
(function_name_usb_info) function_name_usb_info
(parameters
(identifier_self) identifier_self
)parameters
(block
(return_statement
(call
(identifier_UsbInformation) identifier_UsbInformation
(argument_list
(attribute
... | The camera's USB information. |
(module
(function_definition
(function_name__domain_event_pmsuspend_cb) function_name__domain_event_pmsuspend_cb
(parameters
(identifier_conn) identifier_conn
(identifier_domain) identifier_domain
(identifier_reason) identifier_reason
(identifier_opaque) identifier_opaque
)paramete... | Domain suspend events handler |
(module
(function_definition
(function_name_download) function_name_download
(parameters
(identifier_self) identifier_self
(identifier_download_key) identifier_download_key
(default_parameter
(identifier_raise_exception_on_failure) identifier_raise_exception_on_failure
(False... | Download the file represented by the download_key. |
(module
(function_definition
(function_name_extern_store_bool) function_name_extern_store_bool
(parameters
(identifier_self) identifier_self
(identifier_context_handle) identifier_context_handle
(identifier_b) identifier_b
)parameters
(block
(expression_statement
(assig... | Given a context and _Bool, return a new Handle to represent the _Bool. |
(module
(function_definition
(function_name_full_path) function_name_full_path
(parameters
(identifier_self) identifier_self
)parameters
(block
(if_statement
(call
(attribute
(call
(identifier_Path) identifier_Path
(argument_list
... | Return the full path to the file. |
(module
(function_definition
(function_name_from_fs_path) function_name_from_fs_path
(parameters
(identifier_path) identifier_path
)parameters
(block
(expression_statement
(assignment
(identifier_scheme) identifier_scheme
(string_'file') string_'file'
)a... | Returns a URI for the given filesystem path. |
(module
(function_definition
(function_name__inference_tip_cached) function_name__inference_tip_cached
(parameters
(identifier_func) identifier_func
(identifier_instance) identifier_instance
(identifier_args) identifier_args
(identifier_kwargs) identifier_kwargs
(default_paramete... | Cache decorator used for inference tips |
(module
(function_definition
(function_name_write) function_name_write
(parameters
(identifier_self) identifier_self
(identifier_path) identifier_path
)parameters
(block
(with_statement
(with_clause
(with_item
(as_pattern
(call
... | Save the metadata as json |
(module
(function_definition
(function_name_xgroup_destroy) function_name_xgroup_destroy
(parameters
(identifier_self) identifier_self
(identifier_stream) identifier_stream
(identifier_group_name) identifier_group_name
)parameters
(block
(expression_statement
(assignmen... | Delete a consumer group |
(module
(function_definition
(function_name_raise_errors) function_name_raise_errors
(parameters
(identifier_self) identifier_self
(identifier_response) identifier_response
)parameters
(block
(expression_statement
(assignment
(identifier_verb) identifier_verb
... | The innermost part - report errors by exceptions |
(module
(function_definition
(function_name_check) function_name_check
(parameters
(identifier_self) identifier_self
(identifier_action) identifier_action
(default_parameter
(identifier_page) identifier_page
(None) None
)default_parameter
(default_parameter
... | Return ``True`` if the current user has permission on the page. |
(module
(function_definition
(function_name__get_1f_sum_scans) function_name__get_1f_sum_scans
(parameters
(identifier_self) identifier_self
(identifier_d) identifier_d
(identifier_freq) identifier_freq
)parameters
(block
(expression_statement
(assignment
(ide... | Sum counts in each frequency bin over 1f scans. |
(module
(function_definition
(function_name_deserialize_subject_info) function_name_deserialize_subject_info
(parameters
(identifier_subject_info_xml_path) identifier_subject_info_xml_path
)parameters
(block
(try_statement
(block
(with_statement
(with_clause
... | Deserialize a SubjectInfo XML file to a PyXB object. |
(module
(function_definition
(function_name_remove_reaction) function_name_remove_reaction
(parameters
(identifier_self) identifier_self
(identifier_reaction) identifier_reaction
)parameters
(block
(if_statement
(comparison_operator
(identifier_reaction) identifier_... | Remove reaction from model |
(module
(function_definition
(function_name__contains_blinded_text) function_name__contains_blinded_text
(parameters
(identifier_stats_xml) identifier_stats_xml
)parameters
(block
(expression_statement
(assignment
(identifier_tree) identifier_tree
(call
... | Heuristic to determine whether the treebank has blinded texts or not |
(module
(function_definition
(function_name_window_size) function_name_window_size
(parameters
(identifier_self) identifier_self
(identifier_value) identifier_value
)parameters
(block
(if_statement
(parenthesized_expression
(boolean_operator
(boolean_ope... | Set private ``_window_size`` and reset ``_block_matcher``. |
(module
(function_definition
(function_name__create_plot) function_name__create_plot
(parameters
(identifier_tumor) identifier_tumor
(identifier_in_glob) identifier_in_glob
(identifier_out_ext) identifier_out_ext
(default_parameter
(identifier_page) identifier_page
(int... | Create an output plot for the given PDF in the images directory. |
(module
(function_definition
(function_name_make_ns) function_name_make_ns
(parameters
(identifier_self) identifier_self
(identifier_ns) identifier_ns
)parameters
(block
(if_statement
(attribute
(identifier_self) identifier_self
(identifier_namespace) iden... | Returns the `lazily` created template namespace. |
(module
(function_definition
(function_name_init_tag_processors) function_name_init_tag_processors
(parameters
(identifier_self) identifier_self
)parameters
(block
(expression_statement
(assignment
(identifier_register) identifier_register
(attribute
... | Register the TagProcessors that are bundled with doxytag2zealdb. |
(module
(function_definition
(function_name_copyFeatures) function_name_copyFeatures
(parameters
(identifier_self) identifier_self
(identifier_featureSource) identifier_featureSource
)parameters
(block
(if_statement
(comparison_operator
(identifier_featureSource) id... | Copy the features from this source |
(module
(function_definition
(function_name_visit_GpxModel) function_name_visit_GpxModel
(parameters
(identifier_self) identifier_self
(identifier_gpx_model) identifier_gpx_model
(list_splat_pattern
(identifier_args) identifier_args
)list_splat_pattern
(dictionary_splat_p... | Render a GPXModel as a single JSON structure. |
(module
(function_definition
(function_name__get_cache_plus_key) function_name__get_cache_plus_key
(parameters
(identifier_self) identifier_self
)parameters
(block
(expression_statement
(assignment
(identifier_key) identifier_key
(call
(identifier_ge... | Return a cache region plus key. |
(module
(function_definition
(function_name_rexponweib) function_name_rexponweib
(parameters
(identifier_alpha) identifier_alpha
(identifier_k) identifier_k
(default_parameter
(identifier_loc) identifier_loc
(integer_0) integer_0
)default_parameter
(default_parame... | Random exponentiated Weibull variates. |
(module
(function_definition
(function_name_export_to_dict) function_name_export_to_dict
(parameters
(identifier_session) identifier_session
(identifier_recursive) identifier_recursive
(identifier_back_references) identifier_back_references
(identifier_include_defaults) identifier_incl... | Exports databases and druid clusters to a dictionary |
(module
(function_definition
(function_name_someoneKnownSeen) function_name_someoneKnownSeen
(parameters
(identifier_self) identifier_self
(default_parameter
(identifier_home) identifier_home
(None) None
)default_parameter
(default_parameter
(identifier_camera) ... | Return True if someone known has been seen |
(module
(function_definition
(function_name_saveTopicPageDefinitionToFile) function_name_saveTopicPageDefinitionToFile
(parameters
(identifier_self) identifier_self
(identifier_fname) identifier_fname
)parameters
(block
(expression_statement
(call
(attribute
... | save the topic page definition to a file |
(module
(function_definition
(function_name_remove_child) function_name_remove_child
(parameters
(identifier_self) identifier_self
(identifier_child) identifier_child
)parameters
(block
(assert_statement
(call
(identifier_isinstance) identifier_isinstance
... | Remove the term from this term's children. |
(module
(function_definition
(function_name_send_config_set) function_name_send_config_set
(parameters
(identifier_self) identifier_self
(default_parameter
(identifier_config_commands) identifier_config_commands
(None) None
)default_parameter
(default_parameter
... | IOS-XR requires you not exit from configuration mode. |
(module
(function_definition
(function_name__CheckDatabaseEncoding) function_name__CheckDatabaseEncoding
(parameters
(identifier_cursor) identifier_cursor
)parameters
(block
(expression_statement
(assignment
(identifier_cur_character_set) identifier_cur_character_set
... | Enforces a sane UTF-8 encoding for the database. |
(module
(function_definition
(function_name__get_keys) function_name__get_keys
(parameters
(identifier_self) identifier_self
(identifier_read) identifier_read
(identifier_input_records) identifier_input_records
)parameters
(block
(for_statement
(identifier_i) identifier... | Generator that yields `KeyPress` objects from the input records. |
(module
(function_definition
(function_name__choose_float_dtype) function_name__choose_float_dtype
(parameters
(identifier_dtype) identifier_dtype
(identifier_has_offset) identifier_has_offset
)parameters
(block
(if_statement
(boolean_operator
(comparison_operator
... | Return a float dtype that can losslessly represent `dtype` values. |
(module
(function_definition
(function_name_generate_random_string) function_name_generate_random_string
(parameters
(default_parameter
(identifier_length) identifier_length
(integer_8) integer_8
)default_parameter
)parameters
(block
(expression_statement
(ass... | Generate a random string |
(module
(function_definition
(function_name_phrase_replace) function_name_phrase_replace
(parameters
(identifier_self) identifier_self
(identifier_replace_dict) identifier_replace_dict
)parameters
(block
(function_definition
(function_name_r) function_name_r
(paramete... | Replace phrases with single token, mapping defined in replace_dict |
(module
(function_definition
(function_name_parse_udiff) function_name_parse_udiff
(parameters
(identifier_diff) identifier_diff
(default_parameter
(identifier_patterns) identifier_patterns
(None) None
)default_parameter
(default_parameter
(identifier_parent) id... | Return a dictionary of matching lines. |
(module
(function_definition
(function_name_parse_string) function_name_parse_string
(parameters
(identifier_self) identifier_self
)parameters
(block
(expression_statement
(assignment
(identifier_word) identifier_word
(string_'') string_''
)assignment
... | Tokenize a Fortran string. |
(module
(function_definition
(function_name_exit_if_missing_graphviz) function_name_exit_if_missing_graphviz
(parameters
(identifier_self) identifier_self
)parameters
(block
(expression_statement
(assignment
(tuple_pattern
(identifier_out) identifier_out
... | Detect the presence of the dot utility to make a png graph. |
(module
(function_definition
(function_name_hessian) function_name_hessian
(parameters
(identifier_self) identifier_self
)parameters
(block
(expression_statement
(assignment
(identifier_result) identifier_result
(call
(attribute
(identi... | Compute the hessian of the energy |
(module
(function_definition
(function_name_extract_gzip) function_name_extract_gzip
(parameters
(identifier_archive) identifier_archive
(identifier_compression) identifier_compression
(identifier_cmd) identifier_cmd
(identifier_verbosity) identifier_verbosity
(identifier_interac... | Extract a GZIP archive with the gzip Python module. |
(module
(function_definition
(function_name_match_all) function_name_match_all
(parameters
(identifier_d_SMEFT) identifier_d_SMEFT
(default_parameter
(identifier_parameters) identifier_parameters
(None) None
)default_parameter
)parameters
(block
(expression_stat... | Match the SMEFT Warsaw basis onto the WET JMS basis. |
(module
(function_definition
(function_name_file_to_attachment) function_name_file_to_attachment
(parameters
(identifier_filename) identifier_filename
(default_parameter
(identifier_filehandler) identifier_filehandler
(None) None
)default_parameter
)parameters
(block
... | Convert a file to attachment |
(module
(function_definition
(function_name_print_statements) function_name_print_statements
(parameters
(identifier_self) identifier_self
)parameters
(block
(expression_statement
(call
(attribute
(identifier_logger) identifier_logger
(identifier_i... | Print all extracted INDRA Statements. |
(module
(function_definition
(function_name_unhandled_exception) function_name_unhandled_exception
(parameters
(identifier_self) identifier_self
(typed_parameter
(identifier_exception) identifier_exception
(type
(identifier_Exception) identifier_Exception
)type
... | Flask.errorhandler when an exception wasn't correctly handled |
(module
(function_definition
(function_name_countfiles) function_name_countfiles
(parameters
(identifier_path) identifier_path
(default_parameter
(identifier_recurse) identifier_recurse
(False) False
)default_parameter
)parameters
(block
(if_statement
(n... | Returns the number of files under the given directory path. |
(module
(function_definition
(function_name__str_replace) function_name__str_replace
(parameters
(identifier_txt) identifier_txt
)parameters
(block
(expression_statement
(assignment
(identifier_txt) identifier_txt
(call
(attribute
(iden... | Makes a small text amenable to being used in a filename. |
(module
(function_definition
(function_name__make_version) function_name__make_version
(parameters
(identifier_major) identifier_major
(identifier_minor) identifier_minor
(identifier_micro) identifier_micro
(identifier_releaselevel) identifier_releaselevel
(identifier_serial) ide... | Create a readable version string from version_info tuple components. |
(module
(function_definition
(function_name_items2file) function_name_items2file
(parameters
(identifier_items) identifier_items
(identifier_filename) identifier_filename
(default_parameter
(identifier_encoding) identifier_encoding
(string_'utf-8') string_'utf-8'
)defau... | json array to file, canonical json format |
(module
(function_definition
(function_name_calc_core_bytes) function_name_calc_core_bytes
(parameters
(identifier_self) identifier_self
)parameters
(block
(if_statement
(comparison_operator
(call
(identifier_len) identifier_len
(argument_list
... | Convert all used annotation fields into bytes to write |
(module
(function_definition
(function_name__tokenize_chinese_chars) function_name__tokenize_chinese_chars
(parameters
(identifier_self) identifier_self
(identifier_text) identifier_text
)parameters
(block
(expression_statement
(assignment
(identifier_output) identi... | Adds whitespace around any CJK character. |
(module
(function_definition
(function_name__has_y) function_name__has_y
(parameters
(identifier_self) identifier_self
(identifier_kwargs) identifier_kwargs
)parameters
(block
(return_statement
(parenthesized_expression
(boolean_operator
(boolean_operato... | Returns True if y is explicitly defined in kwargs |
(module
(function_definition
(function_name_check_rotation) function_name_check_rotation
(parameters
(identifier_rotation) identifier_rotation
)parameters
(block
(if_statement
(comparison_operator
(identifier_rotation) identifier_rotation
(identifier_ALLOWED_ROT... | checks rotation parameter if illegal value raises exception |
(module
(function_definition
(function_name_prune_hashes) function_name_prune_hashes
(parameters
(identifier_self) identifier_self
(identifier_hashes) identifier_hashes
(identifier_list_type) identifier_list_type
)parameters
(block
(expression_statement
(assignment
... | Prune any hashes not in source resource or change list. |
(module
(function_definition
(function_name_add_task) function_name_add_task
(parameters
(identifier_self) identifier_self
(identifier_pid) identifier_pid
)parameters
(block
(expression_statement
(call
(identifier__register_process_with_cgrulesengd) identifier__regi... | Add a process to the cgroups represented by this instance. |
(module
(function_definition
(function_name_answered_by) function_name_answered_by
(parameters
(identifier_self) identifier_self
(identifier_rec) identifier_rec
)parameters
(block
(return_statement
(boolean_operator
(boolean_operator
(comparison_operator... | Returns true if the question is answered by the record |
(module
(function_definition
(function_name_visit_BoolOp) function_name_visit_BoolOp
(parameters
(identifier_self) identifier_self
(typed_parameter
(identifier_node) identifier_node
(type
(attribute
(identifier_ast) identifier_ast
(identifier_BoolO... | Recursively visit the operands and apply the operation on them. |
(module
(function_definition
(function_name_completer_tokenize) function_name_completer_tokenize
(parameters
(identifier_cls) identifier_cls
(identifier_value) identifier_value
(default_parameter
(identifier_min_length) identifier_min_length
(integer_3) integer_3
)defau... | Quick and dirty tokenizer for completion suggester |
(module
(function_definition
(function_name___generate_string) function_name___generate_string
(parameters
(identifier_length) identifier_length
)parameters
(block
(return_statement
(call
(attribute
(call
(attribute
(string_'') st... | Generate a string for password creation. |
(module
(function_definition
(function_name_validate_headers) function_name_validate_headers
(parameters
(identifier_spec) identifier_spec
(identifier_data) identifier_data
)parameters
(block
(expression_statement
(assignment
(identifier_validated_data) identifier_v... | Validates headers data and creates the config objects |
(module
(function_definition
(function_name_capture_heroku_database) function_name_capture_heroku_database
(parameters
(identifier_self) identifier_self
)parameters
(block
(expression_statement
(call
(attribute
(identifier_self) identifier_self
(id... | Capture Heroku database backup. |
(module
(function_definition
(function_name__get_bottom_line_color) function_name__get_bottom_line_color
(parameters
(identifier_self) identifier_self
)parameters
(block
(expression_statement
(assignment
(identifier_color) identifier_color
(subscript
... | Returns color rgb tuple of bottom line |
(module
(function_definition
(function_name_apply) function_name_apply
(parameters
(identifier_self) identifier_self
(identifier_matrix) identifier_matrix
)parameters
(block
(expression_statement
(assignment
(identifier_view) identifier_view
(subscript
... | Slices the supplied matrix and applies any transform bound to this window |
(module
(function_definition
(function_name_average) function_name_average
(parameters
(identifier_var) identifier_var
(identifier_key) identifier_key
(identifier_N) identifier_N
)parameters
(block
(global_statement
(identifier_average_data) identifier_average_data
... | average over N points |
(module
(function_definition
(function_name__load_root_directory) function_name__load_root_directory
(parameters
(identifier_self) identifier_self
)parameters
(block
(expression_statement
(assignment
(identifier_kwargs) identifier_kwargs
(call
(attri... | Load root directory, which has a cid of 0 |
(module
(function_definition
(function_name_removeRnaQuantificationSet) function_name_removeRnaQuantificationSet
(parameters
(identifier_self) identifier_self
)parameters
(block
(expression_statement
(call
(attribute
(identifier_self) identifier_self
... | Removes an rnaQuantificationSet from this repo |
(module
(function_definition
(function_name_image_data) function_name_image_data
(parameters
(default_parameter
(identifier_verbose) identifier_verbose
(False) False
)default_parameter
)parameters
(block
(global_statement
(identifier__IMAGE_DATA) identifier__I... | Get the raw encoded image data, downloading it if necessary. |
(module
(function_definition
(function_name_StoreStat) function_name_StoreStat
(parameters
(identifier_self) identifier_self
(identifier_responses) identifier_responses
)parameters
(block
(expression_statement
(assignment
(identifier_index) identifier_index
... | Stores stat entry in the flow's state. |
(module
(function_definition
(function_name__get_sqs_conn) function_name__get_sqs_conn
(parameters
(identifier_profile) identifier_profile
(default_parameter
(identifier_region) identifier_region
(None) None
)default_parameter
(default_parameter
(identifier_key)... | Get a boto connection to SQS. |
(module
(function_definition
(function_name_end_logging) function_name_end_logging
(parameters
(default_parameter
(identifier_filename) identifier_filename
(None) None
)default_parameter
)parameters
(block
(if_statement
(attribute
(identifier_logutil... | Close log file and restore system defaults. |
(module
(function_definition
(function_name_append) function_name_append
(parameters
(identifier_self) identifier_self
(identifier_text) identifier_text
)parameters
(block
(expression_statement
(assignment
(identifier_cursor) identifier_cursor
(call
... | Append line to the end |
(module
(function_definition
(function_name_run) function_name_run
(parameters
(identifier_self) identifier_self
)parameters
(block
(expression_statement
(assignment
(identifier_states) identifier_states
(call
(attribute
(call
... | For each state in states file build url and download file |
(module
(function_definition
(function_name__remove_single_line_import_comments) function_name__remove_single_line_import_comments
(parameters
(identifier_r) identifier_r
)parameters
(block
(expression_statement
(call
(attribute
(identifier_logging) identifier... | We previously used more groups for the import statements and named each group. |
(module
(function_definition
(function_name_field_adaptors) function_name_field_adaptors
(parameters
(identifier_self) identifier_self
)parameters
(block
(with_statement
(with_clause
(with_item
(call
(identifier_exception_logging) identifier_exce... | Returns a tuple of Fields for captured fields which need additional treatment. |
(module
(function_definition
(function_name_pubmed_url) function_name_pubmed_url
(parameters
(default_parameter
(identifier_args) identifier_args
(subscript
(attribute
(identifier_sys) identifier_sys
(identifier_argv) identifier_argv
)attribute... | Get a publication URL via the command line using a PubMed ID or PubMed URL |
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