document_id
stringlengths
8
12
document
stringlengths
50
3.21k
split
stringclasses
1 value
d_bash_7700
--- +++ @@ -5,7 +5,7 @@ # and we are part of a git repository that the user has not fully initialized, # go ahead and do the step of fetching the the submodule so the compile process # can run. -if [[ ! -f libtexpdf/configure.ac && -d .git ]]; then +if [ ! -f "libtexpdf/configure.ac" ] && [ -d ".git" ]; then ...
bash
d_bash_7701
--- +++ @@ -1,4 +1,10 @@ #!/usr/bin/env bash + +if [[ ! -f packages || ! -f aur_packages ]]; then + echo "One or more of packages and aur_packages doesn't exist." + echo "Are we in the right directory? Quitting.." + exit +fi echo "Cleaning out orphaned dependencies..." ORPHANS=$(pacman -Qdtq) @@ -10,10 ...
bash
d_bash_7702
--- +++ @@ -1,22 +1,15 @@ #!/bin/bash set -e -x -# Install a system package required by our library -yum install -y atlas-devel - -# Compile wheels -for PYBIN in /opt/python/*/bin; do +# test and compile wheels +for PYBIN in /opt/python/*/bin/; do ${PYBIN}/pip install -r /io/dev-requirements.txt + ${PYBIN...
bash
d_bash_7703
--- +++ @@ -20,8 +20,16 @@ exit 1 fi -open "$DOTFILES/osx/parsec.terminal" -"$DOTFILES/osx/defaults.sh" +# Set correct netrc permissions +touch "$HOME/.netrc" +chmod 0600 "$HOME/.netrc" + +# Correct gnupg permissions after linking, this must be done before a private +# key is added otherwise it will bork the ke...
bash
d_bash_7704
--- +++ @@ -2,9 +2,9 @@ # Install autograph echo "installing autograph + dependencies" -curl -sL -o ./gimme https://raw.githubusercontent.com/travis-ci/gimme/v1.2.0/gimme +curl -sL -o ./gimme https://raw.githubusercontent.com/travis-ci/gimme/v1.5.0/gimme chmod +x ./gimme -eval "$(./gimme 1.10)" +eval "$(./gimme ...
bash
d_bash_7705
--- +++ @@ -2,7 +2,8 @@ # This is called from pre-push.bash to do some verification checks on # the Go code. The script will exit non-zero if any of these tests -# fail. +# fail. However if environment variable IGNORE_VET_WARNINGS is a non-zero +# length string, go vet warnings will not exit non-zero. set -e...
bash
d_bash_7706
--- +++ @@ -4,21 +4,25 @@ git clone -b dev https://github.com/GooglingTheCancerGenome/sv-callers.git cd sv-callers/snakemake -CALLERS="['manta','delly','lumpy','gridss']" +CALLERS=(manta delly lumpy gridss) +STR_CALLERS="[$(printf "'%s'," "${CALLERS[@]}"|sed 's/,$//')]" ECHO=$1 MODE=$2 SCH=$3 SAMPLES=$([ "$EC...
bash
d_bash_7707
--- +++ @@ -18,9 +18,20 @@ curl -X GET $uri; } +function getid () +{ + action="${action}get" + uri="${base}${action}&id=${1}${json}"; + echo "Accessing $uri"; + curl -X GET $uri; +} + case "$1" in ping|dbping) ping $1 + ;; + id) + getid $2 ;; *) ...
bash
d_bash_7708
--- +++ @@ -1,7 +1,7 @@ #!/bin/bash # Install dependencies -sudo yum -y install gcc git python-devel python-setuptools libffi libffi-devel +sudo yum -y install gcc git python-devel python-setuptools libffi libffi-devel openssl openssl-devel sudo easy_install pip sudo pip install ansible
bash
d_bash_7709
--- +++ @@ -1,19 +1,19 @@ #!/bin/bash # BACKEND PARALLEL -sh generateSpecFull.sh +sh generateSpecFull.sh || exit 1 # CLEANER -sh cleaner.sh +sh cleaner.sh || exit 1 # WRAPPER -sh wrapper.sh $1 +sh wrapper.sh $1 || exit 1 # TESTS -time parallel -j $1 --delay 0.1 -a specfull.txt './executor.sh' +time paral...
bash
d_bash_7710
--- +++ @@ -4,4 +4,4 @@ # ------------------------------------------------------ IDE_BIN_HOME="$(dirname "$(realpath "$0")")" -exec "$IDE_BIN_HOME/idea.sh" -e "$@" +exec "$IDE_BIN_HOME/__script_name__" -e "$@"
bash
d_bash_7711
--- +++ @@ -24,7 +24,7 @@ ubuntu) # Get Docker - curl -s https://get.docker.io/ubuntu/ | sh + curl -s https://get.docker.com/ubuntu/ | sh # Update apt-get lists apt-get update
bash
d_bash_7712
--- +++ @@ -10,7 +10,10 @@ echo 'listener 1883' >> /etc/mosquitto/mosquitto.conf echo 'protocol mqtt' >> /etc/mosquitto/mosquitto.conf mv /root/aclfile /etc/mosquitto/aclfile - mosquitto_passwd -b /etc/mosquitto/pwfile iota ${IOTA_PASS} + if ! [ -z "${IOTA_PASS}" ] ; then + # Only if IOTA_PA...
bash
d_bash_7713
--- +++ @@ -27,6 +27,7 @@ brew install tree brew install zsh brew install libyaml +brew install heroku-toolbelt # GNU Duplicates brew install coreutils --default-names
bash
d_bash_7714
--- +++ @@ -8,6 +8,7 @@ alias -g .....='../../../..' alias -g ......='../../../../..' +alias -- -='cd -' alias 1='cd -' alias 2='cd -2' alias 3='cd -3'
bash
d_bash_7715
--- +++ @@ -5,7 +5,7 @@ base_dir="$TWEET_BASE_DIR" log_dir="$TWEET_BASE_DIR/logs" -logfile="$log_dir/handle_mention.log" +logfile="$log_dir/handle_dm.log" source "$tweet_sh" load_keys @@ -22,7 +22,6 @@ then exit 1 fi -echo "ADMIN $administrators" while read -r message do
bash
d_bash_7716
--- +++ @@ -7,6 +7,16 @@ sed -i /HWADDR/d /etc/sysconfig/network-scripts/ifcfg-eth0 rm /etc/udev/rules.d/70-persistent-net.rules +#Remove oh-my-zsh git repo histories to save space; keep the current code checkout. We want oh-my-zsh but not the whole git repo's history +echo "Removing oh-my-zsh git repos..." +rm -...
bash
d_bash_7717
--- +++ @@ -3,8 +3,10 @@ mkdir -p ~/migration/home mkdir ~/migration/home/.ipython -cp -R ~/.ssh ~/migration/home -cp /Library/Preferences/SystemConfiguration/com.apple.airport.preferences.plist ~/migration -cp ~/.z ~/.zhistory ~/migration/home -cp -r ~/.ipython/logs/ ~/.ipython/profile_default/history.sqlite ~/m...
bash
d_bash_7718
--- +++ @@ -1,22 +1,36 @@ #!/bin/bash #$1 $2 ...$NF -k=$1 +dir=$1 +k=$2 + + + intCheck="$k |grep '/[0-9]+'" -if [[ $k =~ ^-?[0-9]+$ ]] -then - names=`ls -la|awk -v k="$k" '$5 > k {print $NF}'` - if [[ $names == "" ]] +if [ -z "$dir" ] || [ -z "$k" ];then + echo "Please enter both a valid directory and a maxim...
bash
d_bash_7719
--- +++ @@ -1,5 +1,5 @@ #!/bin/bash -set -e -x +set -e -u -x function repair_wheel { wheel="$1"
bash
d_bash_7720
--- +++ @@ -2,7 +2,7 @@ which xz 1>/dev/null 2>/dev/null local bi_nokogiri_1_6_8_with_xz_NOT_PRESENT=$? if [ $bi_nokogiri_1_6_8_with_xz_NOT_PRESENT -eq 0 ]; then - brew uninstall xz || return $? + brew uninstall --ignore-dependencies xz || return $? fi bi || return $? if [ $bi_nokogiri_1_6_8_w...
bash
d_bash_7721
--- +++ @@ -6,32 +6,42 @@ # # This script is being used for one of my upcoming projects. It essentially generates # a file containing a list of IP sums. +# Thanks to @rascul for the IP generation script. # # TO RUN: # - Download/Host somewhere. # - Edit the saveLocation line with where you want to save to and ...
bash
d_bash_7722
--- +++ @@ -1,4 +1,6 @@ #!/bin/bash +set -e + if [ "${BUILDER_TOP_DIR}" = "" ] then BUILDER_TOP_DIR=$( cd ../..; pwd ) @@ -24,10 +26,13 @@ fi done +pushd .. make -f linux.mak +popd + pushd ../Common make -f linux.mak popd -python3-pylint --rcfile pylintrc wb_*.py ../Common/wb*.py ../Git/wb*.py ....
bash
d_bash_7723
--- +++ @@ -7,7 +7,7 @@ mkdir "${BUILD_DIR}" -export CCACHE_SIZE="4G" +export CCACHE_SIZE="1G" export CCACHE_COMPRESS=1 NUM_THREADS=4
bash
d_bash_7724
--- +++ @@ -8,7 +8,7 @@ email_address="$1" ussd_conv="CONVERSATION:wikipedia_ussd:$2" -sms_conv="TRANSPORT_TAG:wikipedia_sms:$3" +sms_conv="CONVERSATION:wikipedia_sms:$3" . $(dirname $0)/mangle_routing_table_utils.sh
bash
d_bash_7725
--- +++ @@ -1,8 +1,8 @@ #!/bin/bash -if [ "${TRAVIS_OS_NAME}" == "osx" ] +if [ "${RUNNER_OS}" == "macOS" ] then - brew cask install google-chrome + brew install google-chrome sudo Xvfb :99 -ac -screen 0 1024x768x8 & export CHROME_BIN="/Applications/Google Chrome.app" npm run test:prepar...
bash
d_bash_7726
--- +++ @@ -24,4 +24,4 @@ sleep 1 done -halt +poweroff -f
bash
d_bash_7727
--- +++ @@ -3,6 +3,7 @@ ALL_HEALTHY=`aws elb describe-instance-health --load-balancer-name memecaptain | jq '.InstanceStates | map(.State=="InService") | all'` echo `date` all instances healthy? $ALL_HEALTHY if [ "$ALL_HEALTHY" = "true" ]; then break; fi + sleep 4 done }
bash
d_bash_7728
--- +++ @@ -23,9 +23,14 @@ fi # Create the virtual env if necessary -if [[ ! -d '.venv' ]] +if ! [[ -e .venv/bin/activate ]] then - python3 -m venv .venv + echo Creating virtual environment + # Shield from systems needing to install the venv module separately + if ! python3 -m venv .venv + then + ...
bash
d_bash_7729
--- +++ @@ -4,7 +4,8 @@ cd website make clean && make -echo "lettre.at" > _book/CNAME +cp static/images/favicon.png _book/html/favicon.png +echo "lettre.at" > _book/html/CNAME sudo pip install ghp-import -ghp-import -n _book +ghp-import -n _book/html git push -f https://${GH_TOKEN}@github.com/${TRAVIS_REPO_SLUG...
bash
d_bash_7730
--- +++ @@ -2,3 +2,4 @@ cp -R scriptmodules/ports/* "/home/pi/RetroPie-Setup/scriptmodules/ports/" cp -R scriptmodules/emulators/* "/home/pi/RetroPie-Setup/scriptmodules/emulators" +cp -R scriptmodules/supplementary/* "/home/pi/RetroPie-Setup/scriptmodules/supplementary"
bash
d_bash_7731
--- +++ @@ -4,5 +4,5 @@ [[ "$OSTYPE" =~ ^darwin ]] || return 1 # node -path+=/Users/ejoubaud/node_modules/.bin +path+=$HOME/node_modules/.bin
bash
d_bash_7732
--- +++ @@ -5,12 +5,13 @@ KPI_WEB_SERVER="${KPI_WEB_SERVER:-uWSGI}" uwsgi_command="/usr/local/bin/uwsgi --ini ${KPI_SRC_DIR}/uwsgi.ini" + if [[ "${KPI_WEB_SERVER,,}" == 'uwsgi' ]]; then echo 'Running `kpi` container with uWSGI application server.' exec ${uwsgi_command} else echo 'Running `kpi` co...
bash
d_bash_7733
--- +++ @@ -22,4 +22,4 @@ source "$DIR"/../venv pip install pyinstaller -make translate +make translations
bash
d_bash_7734
--- +++ @@ -10,17 +10,5 @@ # echo "YYYY-MM-DD - do something or other" # rake growstuff:oneoff:something -echo "2014-12-01 - load lots of new crops" -rake growstuff:import_crops file=db/seeds/crops-12-mint.csv -rake growstuff:import_crops file=db/seeds/crops-13-brassicas.csv -rake growstuff:import_crops file=db/s...
bash
d_bash_7735
--- +++ @@ -4,11 +4,12 @@ set -o nounset set -o pipefail -cd blob -mkdir source -tar zxf source.tar.gz -C source --strip-components=1 +tag=$(cat blob/tag) +git clone https://github.com/cloudfoundry/$LANGUAGE-buildpack.git source +cd source +git checkout $tag +git submodule update --init --recursive -cd source ...
bash
d_bash_7736
--- +++ @@ -13,7 +13,7 @@ for src_name in *; do name=$(printf "$src_name" | cut -d- -f5-) - path="${jagen_bin_dir:?}/arm-hisiv200-linux-${name}" + path="${jagen_bin_dir:?}/${jagen_target_system}-${name}" cat >"$path" <<EOF || return exec \$jagen_ccache "$src_dir/$src_name" "\$@...
bash
d_bash_7737
--- +++ @@ -16,6 +16,9 @@ apt-get-install python-certbot-nginx +print_step_comment "Adding crontab entry for certificate renewals." +(crontab -l | echo "23 3,18 * * * root certbot renew --quiet") | crontab - + print_success "All done." certbot --version echo
bash
d_bash_7738
--- +++ @@ -14,7 +14,11 @@ # # With the --install option, also tries to install the right version. -# This version should always be bumped to the newest version available. +# This version should always be bumped to the newest version available that +# works with stable Rust. +# ... but not 0.10.0, since it's the ...
bash
d_bash_7739
--- +++ @@ -22,7 +22,7 @@ git clone https://www.github.com/freenas/freenas --depth=1 /freenas cd /freenas/src/middlewared pip3.6 uninstall -y middlewared.client -python3.6 setup_client.py install +python3.6 setup_client.py install --single-version-externally-managed --record $(mktemp) cd /freenas/src/middlewared/...
bash
d_bash_7740
--- +++ @@ -11,6 +11,9 @@ # create directories echo "Creating application directory..." mkdir $APP_DIR > /dev/null 2>&1 +echo "Creating application subdirectories..." +exho "tmp/" +mkdir $APP_DIR'tmp/' > /dev/null 2>&1 echo "Creating log directory..." mkdir $LOG_DIR > /dev/null 2>&1
bash
d_bash_7741
--- +++ @@ -4,7 +4,7 @@ set -x ## Often used tools. -$minimal_apt_get_install curl less vim-tiny psmisc +$minimal_apt_get_install curl less vim-tiny psmisc gpg-agent dirmngr ln -s /usr/bin/vim.tiny /usr/bin/vim ## This tool runs a command as another user and sets $HOME.
bash
d_bash_7742
--- +++ @@ -1,25 +1,26 @@ #!/bin/bash -pushd $NEBULA_PATH/scripts +pushd $NEBULA2_PATH/scripts RIAK_HOST=nebriak1 RIAK_HTTP_PORT=8098 +DELAY=5 # create cdmi bucket type ssh root@${RIAK_HOST} "riak-admin bucket-type create cdmi '{\"props\":{}}'" ssh root@${RIAK_HOST} "riak-admin bucket-type activate cdmi" ...
bash
d_bash_7743
--- +++ @@ -1,11 +1,32 @@ #!/bin/bash +echo "Installing EPEL" +dnf install -y /var/preserve/epel-release-latest-8.noarch.rpm + +echo "Install ELREPO" +dnf install -y https://www.elrepo.org/elrepo-release-8.el8.elrepo.noarch.rpm + echo "Downloading packages" -yum update -y --downloadonly --downloaddir=/var/preserv...
bash
d_bash_7744
--- +++ @@ -2,21 +2,11 @@ # # Author: Petr Zemek <s3rvac@gmail.com> # -# Sets the background of the screen(s). +# Sets the background of the screens. # -# Find the screen resolution. -# TODO When using dual heads, width is 3360 (or similar), i.e. the sum of the -# widths of both monitors. -# LINE=`xrandr -...
bash
d_bash_7745
--- +++ @@ -1,7 +1,21 @@ +include array.util.ArrayUtil include base.util.BaseUtil include string.util.StringUtil LoggerUtil(){ + _formatLogLevel(){ + logLevel=${1} + validLogLevels=(info error) + + maxLength=$(ArrayUtil returnMaxLength ${validLogLevels[@]}) + + while [[ $(BaseComparator isLessThan $(StringUt...
bash
d_bash_7746
--- +++ @@ -16,7 +16,7 @@ if [[ $PATH == *"$ENV"* ]]; then echo "Conda env '$ENV' already activated." else - source activate $ENV + conda activate $ENV fi fi }
bash
d_bash_7747
--- +++ @@ -26,4 +26,19 @@ alias gcl='git-cleanup' function git-merged() { git branch --merged $@ | sed -e '/^*/d' } -function git-cleanup() { git branch -d $(git-merged); git remote prune origin } +function git-cleanup() { + echo "=== Cleaning Remote Branch Caches ===" + git remote prune origin + + echo "=== Cl...
bash
d_bash_7748
--- +++ @@ -6,26 +6,54 @@ exit 1 fi +LOG_DIR="/tmp/meteor-test-runner" +# CirleCI. +if [ -n "${CIRCLE_ARTIFACTS}" ]; then + LOG_DIR="${CIRCLE_ARTIFACTS}" +fi +LOG_DIR="${LOG_DIR}/${PACKAGE}" +rm -rf ${LOG_DIR} +mkdir -p ${LOG_DIR} + # Move to the correct directory. cd "$( dirname "${BASH_SOURCE[0]}" )/.." ...
bash
d_bash_7749
--- +++ @@ -1,5 +1,5 @@ #!/bin/bash -# $Id: makePackage.sh,v 1.7 2004/03/20 18:14:01 cpbotha Exp $ +# $Id: makePackage.sh,v 1.8 2004/04/15 12:51:00 cpbotha Exp $ # go to the directory that contains makePackage.sh (i.e. devide/installer) cd `dirname $0` @@ -21,6 +21,8 @@ $INSTALLER devide.spec # strip all the l...
bash
d_bash_7750
--- +++ @@ -2,6 +2,7 @@ brew cask install adium brew cask install alfred +brew cask install appcleaner brew cask install charles brew cask install dropbox brew cask install evernote @@ -10,9 +11,10 @@ brew cask install google-chrome brew cask install imageoptim brew cask install iterm2 -brew cask install ke...
bash
d_bash_7751
--- +++ @@ -1,4 +1,4 @@ -#!/usr/bin/env ssh-agent /bin/sh +#!/usr/bin/ssh-agent /bin/sh set -x
bash
d_bash_7752
--- +++ @@ -20,7 +20,7 @@ { # This relies on the fact that the latest iPhone SDK # is the last thing listed before the Xcode version. - /usr/bin/xcodebuild -version -sdk 2> /dev/null | tail -n 4 | head -n 1 | awk '{ print $2 }' + /usr/bin/xcodebuild -version -sdk 2> /dev/null | grep SDKVersion | tail...
bash
d_bash_7753
--- +++ @@ -1,3 +1,4 @@ #!/bin/sh + npm install --prefix=$VIRTUAL_ENV -g `cat globals.npm | tr '\n' ' '` npm install
bash
d_bash_7754
--- +++ @@ -4,7 +4,7 @@ git clone https://github.com/GoogleCloudPlatform/kubernetes pushd kubernetes -git checkout tags/v$VERSION +git checkout -b v$VERSION tags/v$VERSION /opt/bin/kubectl create -f examples/guestbook/redis-master.json /opt/bin/kubectl create -f examples/guestbook/redis-master-service.json
bash
d_bash_7755
--- +++ @@ -6,14 +6,16 @@ if [ $CASE == "NODE2" ]; then echo "Case node2, just waiting for the other node to join us then exit" - sleep 300 - exit 0 + ip addr show + sleep 60 + cat /var/log/opsbro/gossip.log + exit 1 fi # Case 1: try to detect and join other node # Sleep a bit to be s...
bash
d_bash_7756
--- +++ @@ -1,21 +1,30 @@ #!/bin/bash set -ex +if [ "$(uname -m)" == "aarch64" ]; then + MAX_JOBS=3 +else + MAX_JOBS= +fi + if [ ! -f /usr/local/lib/libz.a ]; then pushd zlib - ./configure && make -j install + ./configure + make -j $MAX_JOBS install popd fi if [ ! -f /usr/local/lib...
bash
d_bash_7757
--- +++ @@ -2,7 +2,7 @@ # It turns out 'openmp=True' will cause some problems in Theano 0.7.0, so it was removed -export THEANO_FLAGS='mode=FAST_RUN,floatX=float32,optimizer_excluding=inplace,allow_gc=False' +export THEANO_FLAGS='mode=FAST_RUN,floatX=float32,openmp_elemwise_minsize=1000,allow_gc=False' export O...
bash
d_bash_7758
--- +++ @@ -17,7 +17,9 @@ } setJavaHome(){ - if [[ $(StringValidator beginsWith 6.1 ${1}) ]]; then + local version=${1} + + if [[ $(StringValidator isSubstring version 6.1) ]]; then ${_log} info "configuring_Liferay_to_use_JDK7..." if [[ $(getOS) =~ NT ]]; then
bash
d_bash_7759
--- +++ @@ -2,13 +2,18 @@ # To ensure this script always executes relative to the repo root cd "$(dirname "$0")/.." + +docker build -t puppet-pdk -f ./ci/Dockerfile.pdk . if [ ! "${SKIP_VALIDATION}" == "true" ]; then echo "Running validations..." docker run --rm \ -v $PWD:/root \ -w /root \ - ...
bash
d_bash_7760
--- +++ @@ -3,3 +3,11 @@ export SOCKET_DIR="/usr/local/var/www" export LOG_DIR="/usr/local/var/log/nginx" + +if [ "$(uname -s)" == "Linux" ]; then + export PATH="$HOME/.nodenv/bin:$PATH" + export PATH="$HOME/.nodenv/plugins/node-build/bin:$PATH" + + export PATH="$HOME/.rbenv/bin:$PATH" + export PATH="$HOME/.r...
bash
d_bash_7761
--- +++ @@ -13,10 +13,6 @@ export PATH=/usr/local/opt/coreutils/libexec/gnubin:${PATH} export MANPATH=/usr/local/opt/coreutils/libexec/gnuman:${MANPATH} fi - -# Disable Homebrew locale filtering (throws errors) -# https://github.com/Linuxbrew/brew/issues/568 -export HOMEBREW_NO_ENV_FILTERING=1 # Inject Linu...
bash
d_bash_7762
--- +++ @@ -3,6 +3,10 @@ apt-get -y install linux-headers-$(uname -r) build-essential apt-get -y install zlib1g-dev libssl-dev libreadline-gplv2-dev apt-get -y install curl unzip +apt-get clean + +# Set up sudo +echo 'vagrant ALL=NOPASSWD:ALL' > /etc/sudoers.d/vagrant # Tweak sshd to prevent DNS resolution (spe...
bash
d_bash_7763
--- +++ @@ -3,7 +3,7 @@ case "$1" in java8) - echo "https://github.com/adoptium/temurin8-binaries/releases/download/jdk8u322-b06/OpenJDK8U-jdk_x64_linux_hotspot_8u322b06.tar.gz" + echo "https://github.com/adoptium/temurin8-binaries/releases/download/jdk8u332-b09/OpenJDK8U-jdk_x64_linux_hotspot_8u332b09.tar.g...
bash
d_bash_7764
--- +++ @@ -6,8 +6,8 @@ if [[ "$TERM" == "screen" ]]; then print -Pn "\ek$1\e\\" #set screen hardstatus, usually truncated at 20 chars elif [[ ($TERM =~ "^xterm") ]] || [[ ($TERM == "rxvt") ]] || [[ "$TERM_PROGRAM" == "iTerm.app" ]]; then + print -Pn "\e]2;$2\a" #set window name print -Pn "\e]1;$1...
bash
d_bash_7765
--- +++ @@ -9,6 +9,9 @@ aws s3 website "s3://$BUCKET" --index-document index.html --error-document error.html fi +# disable indexing of dev site +echo "User-agent: *\nDisallow: /" > dist/robots.txt + # sync site aws s3 sync --acl public-read --delete dist/ "s3://$BUCKET" echo "$BRANCH branch deployed to http...
bash
d_bash_7766
--- +++ @@ -1,4 +1,4 @@ # Setup cron for downloading ns information -CRON='0,15,30,45 * * * * /opt/core/bin/core-ns-download.py -u "$(mdata-get ns_urls 2>/dev/null)"' +CRON='0,5,10,15,20,25,30,35,40,45,50,55 * * * * /opt/core/bin/core-ns-download.py -u "$(mdata-get ns_urls 2>/dev/null)"' (crontab -l 2>/dev/null |...
bash
d_bash_7767
--- +++ @@ -1,6 +1,13 @@ #/bin/sh dir=$(dirname $(which $0)); trans_url="http://darwin-trans/message/xliff/part" +orig_url="http://darwin-trans/message/origxliff/part" + + +if [ "$1" = "orig" ]; then + wget --no-proxy "$orig_url/2/" -O "$dir/../apps/public/i18n/en/messages.xml" + wget --no-proxy "$orig_url/1/" -...
bash
d_bash_7768
--- +++ @@ -6,8 +6,20 @@ source ./helper.sh $* set_stage +export IACA=$PREFIX/iaca-2.1-lin64 + wgetl iaca-lin64.zip unzip iaca-lin64.zip -mv iaca-lin64 /share/apps/iaca-2.1-lin64 +mv iaca-lin64 $IACA + +# Unfortunately, IACA requires at least libstdc++3.14.15 +# RHEL6 is a few steps behind. This is also an iss...
bash
d_bash_7769
--- +++ @@ -6,10 +6,10 @@ grunt - cp $BASE_DIR/../js-build/forms-angular.min.js $BASE_DIR/../../$1/app/lib/forms-angular.min.js - cp $BASE_DIR/../js-build/forms-angular.js $BASE_DIR/../../$1/app/lib/forms-angular.js + cp $BASE_DIR/../js-build/forms-angular.min.js $BASE_DIR/../../$1/app/components/a...
bash
d_bash_7770
--- +++ @@ -13,7 +13,7 @@ HEAD_SHA=`git rev-parse HEAD` if [ "$MASTER_SHA" == "$HEAD_SHA" ]; then # get the version from the version file - VERSION_TAG="v`cat VERSION.TXT`" + VERSION_TAG="v`cat VERSION.txt`" # check to make sure the tag doesn't already exist if ! git rev-parse $VERSION_TAG >/dev/null 2...
bash
d_bash_7771
--- +++ @@ -7,4 +7,4 @@ tmux send-keys -t sparkfun 'workon sparkfun' c-m tmux send-keys -t sparkfun 'cp -R ~pi/sparkfun-avc /tmp' c-m tmux send-keys -t sparkfun 'cd /tmp/sparkfun-avc' c-m -tmux send-keys -t sparkfun 'sudo ~pi/.virtualenvs/sparkfun/bin/python -m main --max-throttle=0.5 -k paths/sparkfun-avc-2016.km...
bash
d_bash_7772
--- +++ @@ -1,6 +1,8 @@ # vim: ft=sh dot_list() { - _dot_list() { echo $1,$2 } + _dot_list() { + echo $1,$2 + } parse_linkfiles _dot_list
bash
d_bash_7773
--- +++ @@ -1,5 +1,5 @@ #!/bin/sh -dotnet restore --verbosity minimal -dotnet build src/API -dotnet test tests/API.Tests -dotnet publish src/API +dotnet restore --verbosity minimal || exit 1 +dotnet build src/API || exit 1 +dotnet test tests/API.Tests || exit 1 +dotnet publish src/API || exit 1
bash
d_bash_7774
--- +++ @@ -2,7 +2,7 @@ set -e -JAVA_VERSION=8u131-b11-0ubuntu1.16.04.2 +JAVA_VERSION=8u131-b11-2ubuntu1.16.04.3 CA_CERTIFICATES_JAVA_VERSION=20160321 # Install
bash
d_bash_7775
--- +++ @@ -27,3 +27,6 @@ echo "Running Ansible playbook..." ansible-playbook main.yml --ask-become-pass + +echo "Running dotfiles bootstrap script..." +test -d ~/.dotfiles && cd ~/.dotfiles && ./script/bootstrap
bash
d_bash_7776
--- +++ @@ -3,7 +3,7 @@ starcluster start -c deploy aws-deployment starcluster put aws-deployment -u mark $TARBALL $TARBALL starcluster put aws-deployment -u mark $FOLDER/scripts/baton.sh baton.sh -starcluster sshmaster aws-deployment -u mark "./baton.sh $TARBALL 250 --iterations 16777216" +starcluster sshmaster...
bash
d_bash_7777
--- +++ @@ -10,6 +10,7 @@ if [ -n "$1" ]; then BOOTSTRAP="$1" else + # You need to run `composer install` to generate this file. BOOTSTRAP="vendor/autoload.php" fi
bash
d_bash_7778
--- +++ @@ -5,7 +5,7 @@ fi [ ! -e static-analysis ] && mkdir static-analysis cd static-analysis -if scan-build --status-bugs cmake .. -DCMAKE_BUILD_TYPE=Debug; then +if scan-build --status-bugs cmake ..; then # This has to be done with else because with '!' it won't work on Mac OS X echo else
bash
d_bash_7779
--- +++ @@ -1 +1,2 @@ -cp -R -v $PROJECT_HOME/build-support/fonts $VM_PATH/Resources/Scamper +mkdir $VM_PATH/Resources/Scamper/fonts +cp -R -v $PROJECT_HOME/build-support/fonts $VM_PATH/Resources/Scamper/fonts
bash
d_bash_7780
--- +++ @@ -6,4 +6,4 @@ fi CTAKES_HOME=/usr/local/apache-ctakes-3.2.2/ CP="${CTAKES_HOME}/desc/:${CTAKES_HOME}/resources/:$( find $(dirname $0)/../lib ${CTAKES_HOME}/lib -name "*.jar" | tr '\n' ':')" -${JAVA_HOME}/bin/java -cp ${CP} com.celgene.red.ctakes.spark.CtakesSparkMain ${1} +${JAVA_HOME}/bin/java -cp ${CP...
bash
d_bash_7781
--- +++ @@ -2,7 +2,7 @@ source "$(dirname $0)/env.sh" -if [ ! -x $MULTIRUST_DIR/bin/cargo ]; then +if [ ! -x $MULTIRUST_DIR/bin/multirust ]; then ( cd /tmp git clone --recursive https://github.com/brson/multirust.git multirust
bash
d_bash_7782
--- +++ @@ -1,4 +1,7 @@ #!/bin/bash + +# The following tags are required: +# rackuuid - all resources related to the deployment should have the same tag # The following IAM roles are required: # AmazonS3ReadOnlyAccess
bash
d_bash_7783
--- +++ @@ -1,4 +1,7 @@ #!/bin/sh + +#stop on error +set -e cd /
bash
d_bash_7784
--- +++ @@ -1,4 +1,4 @@ -sudo dnf -y install feh xmonad zsh +sudo dnf -y install feh zsh yp-tools sudo dnf -y install dnf-plugins-core sudo dnf -y copr enable dperson/neovim sudo dnf -y install neovim
bash
d_bash_7785
--- +++ @@ -1,5 +1,6 @@ #!/bin/bash set -eux +sudo apt-get update sudo apt-get install -y \ automake \ build-essential \
bash
d_bash_7786
--- +++ @@ -10,6 +10,11 @@ if [[ $PACKER_BUILDER_TYPE =~ vmware ]]; then yum -y install net-tools -yum -y install epel-release -yum -y install open-vm-tools +mount -o loop /home/vagrant/linux.iso /mnt +cd /tmp +tar zxf /mnt/VMwareTools-*.tar.gz +umount /mnt +/tmp/vmware-tools-distrib/vmware-install.pl --default +...
bash
d_bash_7787
--- +++ @@ -9,3 +9,4 @@ for c in $user_commands; do; alias sc-$c="systemctl $c"; done for c in $sudo_commands; do; alias sc-$c="sudo systemctl $c"; done +alias sc-launch="sudo systemctl start $c && sudo systemctl enable $c"
bash
d_bash_7788
--- +++ @@ -2,9 +2,9 @@ set -e cd "$(dirname "$(readlink -f "$BASH_SOURCE")")" - +pattern='.*?\/docs\/([0-9]+\.[0-9]+\.[0-9]+)\/learn.*' version=$(curl -sSL 'http://logstash.net' \ - | sed -rn '0,/.*?\/docs\/.\..\..\/learn.*/s/.*?\/docs\/([0-9]*\.[0-9]*\.[0-9]*)\/learn.*/\1/gp') + | sed -rn "0,/${pattern}/s/${pa...
bash
d_bash_7789
--- +++ @@ -39,7 +39,7 @@ (cd proto_uni ; sh ./RunTest.sh -u $options) (cd proto_cc ; sh ./RunTest.sh -u $options) -(cd proto_uni ; sh ./RunTest.sh $options) (cd proto_sscop ; sh ./RunTest.sh $options) (cd proto_sscfu ; sh ./RunTest.sh $options) +(cd proto_uni ; sh ./RunTest.sh $options) (cd proto_cc ; sh ./Ru...
bash
d_bash_7790
--- +++ @@ -1,5 +1,5 @@ #!/bin/sh -curl -s -L -o boost_1_59_0.tar.bz2 "http://downloads.sourceforge.net/project/boost/boost/1.59.0/boost_1_59_0.tar.bz2?r=http%3A%2F%2Fwww.boost.org%2Fusers%2Fhistory%2Fversion_1_59_0.html&ts=1441002160&use_mirror=netassist" +curl -s -L -o boost_1_59_0.tar.bz2 "http://downloads.source...
bash
d_bash_7791
--- +++ @@ -1,5 +1,5 @@ #!/bin/bash -mkdir -p ${PREFIX}/x86_64-conda_cos6-linux-gnu/sysroot -pushd ${PREFIX}/x86_64-conda_cos6-linux-gnu/sysroot > /dev/null 2>&1 +mkdir -p ${PREFIX}/x86_64-conda_cos6-linux-gnu/sysroot/usr +pushd ${PREFIX}/x86_64-conda_cos6-linux-gnu/sysroot/usr > /dev/null 2>&1 cp -Rf "${SRC_DIR}...
bash
d_bash_7792
--- +++ @@ -10,7 +10,7 @@ ##module load rstudio export SLURM_NTASKS -export RSTUDIO_PANDOC="/n/sw/fasrcsw/apps/Core/rstudio/0.98.1103-fasrc01/bin/pandoc/" +export RSTUDIO_PANDOC="/n/helmod/apps/centos7/Core/rstudio/1.1.453-fasrc01/bin/pandoc" # change filename to Rmd to be knitted. ncores is passed in through...
bash
d_bash_7793
--- +++ @@ -4,12 +4,23 @@ set -u set -o pipefail +print_public_key() { + local key=$1 + + if [[ -n "$key" ]]; then + jq -c -n --arg public_key "$key" '{ "public_key": $public_key }' + else + echo '{"public_key":""}' + fi +} + export PATH=/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sb...
bash
d_bash_7794
--- +++ @@ -37,4 +37,4 @@ fi -composer install --prefer-source +composer install
bash
d_bash_7795
--- +++ @@ -1,29 +1,35 @@ #!/bin/bash + +# Create dir /boot/extra +mkdir -p /boot/extra # Install curl, if needed if [[ ! `command -v curl` ]]; then - wget -qO- http://boxcar.nicinabox.com/install_curl | sh - + + # Will it be installed? + if [ ! -f /boot/extra/curl* ]; then + wget -qO- http://boxcar.nicina...
bash
d_bash_7796
--- +++ @@ -9,6 +9,8 @@ CXXFLAGS=-I$PREFIX/include \ ../configure \ --prefix=$PREFIX \ + --disable-pic14-port \ + --disable-pic16-port make -j$CPU_COUNT make install
bash
d_bash_7797
--- +++ @@ -1,4 +1,4 @@ -conda create -n openmined python=3.4 +conda create -n openmined python=3.6 source activate openmined conda install -c anaconda mpc conda install -c anaconda gmp
bash
d_bash_7798
--- +++ @@ -2,30 +2,4 @@ set -e -function error { - echo error: "$@" >&2 - exit 1 -} - -function do_cmd { - echo "[+] $@" - eval "$@" -} - -function git_update_submodule_with_ssh { - local name="$1" - local file="$2" - cat > ssh-wrapper.sh <<EOF -#!/bin/sh -ssh -i "$file" "\$@" -EOF - chm...
bash
d_bash_7799
--- +++ @@ -3,4 +3,10 @@ # reload: # https://www.npmjs.com/package/reload -./build/parallel_commands "reload" "./build/run_filewatcher.sh" +# I renamed it to reload0 to deal with this issue: +# https://github.com/jprichardson/reload/issues/13 +# which is about a command run at boot time in Ubuntu having the same ...
bash