ascl_id stringclasses 752
values | repo_url stringclasses 737
values | file_path stringlengths 4 194 | content large_stringlengths 1 1M | language stringclasses 29
values | license_type stringclasses 24
values | size int64 1 1M |
|---|---|---|---|---|---|---|
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rt/rt_spectra.f90 | ! These are modules for reading, integrating and interpolating RT-relevant
! values from spectral tables, specifically SED (spectral energy
! distrbution) tables for stellar particle sources, as functions of age
! and metallicity, and UV-spectrum tables, as functions of redshift.
! The modules are:
! spectrum_integrato... | Fortran | null | 71,967 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rt/rt_init_xion.f90 | !XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
SUBROUTINE rt_init_xion(ilevel)
! Initialize hydrogen ionization state in all cells at given level from
! density and temperature in the cells, assuming chemical equilibrium.
!--------------------------------------------------------------------... | Fortran | null | 9,763 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rt/rt_init.f90 | !*************************************************************************
SUBROUTINE rt_init
! Initialize everything for radiative transfer
! Some initialisation is also needed in case of non-equilibrium
! chemistry, even if rt=.false.
!-------------------------------------------------------------------------
us... | Fortran | null | 24,623 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rt/rt_flux_module.f90 | MODULE rt_flux_module
use rt_parameters
implicit none
private ! default
public read_hll_eigenvalues, cmp_rt_faces
CONTAINS
!************************************************************************
SUBROUTINE read_hll_eigenvalues()
! Read M1 eigenvalues for hll method from file 'hll_evals.list'
! into ... | Fortran | null | 15,191 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rt/rt_interpol_hydro.f90 | !************************************************************************
SUBROUTINE rt_upload_fine(ilevel)
! This routine performs a restriction operation (averaging down)
! for the RT variables.
!------------------------------------------------------------------------
use amr_commons
use rt_hydro_commons
implic... | Fortran | null | 5,025 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rt/rt_hydro_commons.f90 | module rt_hydro_commons
use amr_parameters
use rt_parameters
real(dp),allocatable,dimension(:,:)::rtuold,rtunew ! State vector and its update
end module rt_hydro_commons
| Fortran | null | 177 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rt/rt_init_hydro.f90 | !*************************************************************************
subroutine rt_init_hydro
! Allocate rt variables, initialise for RT or non-equilibrium chemistry,
! initialise ionisation states if needed, and read rt vars if restarting.
!---------------------------------------------------------------------... | Fortran | null | 5,005 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rt/rt_parameters.f90 | module rt_parameters
use hydro_parameters
use constants
#ifdef NGROUPS
integer,parameter::nGroups=NGROUPS ! # of photon groups (set in Makefile)
#else
integer,parameter::nGroups=1
#endif
integer,parameter::nRTvar=nGroups*(1+ndim) ! # of RT variables (photon density and flux)
real(dp)::rt_c=0., rt... | Fortran | null | 10,014 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rt/rt_init_flow_fine.f90 | !################################################################
!################################################################
!################################################################
!################################################################
subroutine rt_init_flow
use amr_commons
use rt_hydro... | Fortran | null | 14,530 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rt/rt_cooling_module.f90 | ! Non-equlibrium (in H2, HI, HII, HeI, HeII, HeIII)
! cooling module for radiation-hydrodynamics.
! For details, see Rosdahl et al. (2013), Rosdahl & Teyssier (2015),
! and Nickerson, Teyssier, & Rosdahl (2018).
! Joki Rosdahl, Sarah Nickerson, Andreas Bleuler, and Romain Teyssier.
module rt_cooling_module
use cooli... | Fortran | null | 67,073 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rt/rt_condinit.f90 | !================================================================
!================================================================
!================================================================
!================================================================
subroutine rt_condinit(x,u,dx,nn)
use amr_parameters
... | Fortran | null | 1,268 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rt/rt_hydro_flag.f90 | ! RT patch: Only change here is to possibly do refinement if rt_err_grad_n
! or rt_err_grad_xH namelist parameters are set
! ________________________________________________________________________
subroutine rt_hydro_flag(ilevel)
use amr_commons
use rt_hydro_commons
implicit none
integer::ilevel
!... | Fortran | null | 3,889 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rt/rt_godunov_fine.f90 | !************************************************************************
SUBROUTINE rt_godunov_fine(ilevel, dt)
! This routine is a wrapper to the grid solver for radiative transfer.
! Small grids (2x2x2) are gathered from level ilevel and sent to the
! RT solver. On entry, RT variables are gathered from array rtuold... | Fortran | null | 18,347 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rt/rt_boundana.f90 | !############################################################
!############################################################
!############################################################
!############################################################
subroutine rt_boundana(x,u,dx,ibound,ncell)
use amr_parameters, ONLY: ... | Fortran | null | 1,433 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rt/rt_hydro_boundary.f90 | !################################################################
!################################################################
!################################################################
!################################################################
subroutine rt_make_boundary_hydro(ilevel)
use amr_comm... | Fortran | null | 6,554 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rt/rt_output_hydro.f90 | ! Outputting of radiation variables and groups info
!
!************************************************************************
subroutine rt_backup_hydro(filename, filename_desc)
!------------------------------------------------------------------------
use amr_commons
use rt_hydro_commons
use rt_parameters
u... | Fortran | null | 10,827 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rt/utils/generate_coolrates.f90 | !************************************************************************
PROGRAM generate_coolrates
! Generate files containing tables of cooling and heating rates in
! the implicit cooling-module of RAMSES, to verify they are correct.
!------------------------------------------------------------------------
use rt... | Fortran | null | 2,989 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rhd/update_time.f90 | subroutine update_time(ilevel)
use amr_commons
use pm_commons
use hydro_commons
use cooling_module
use mpi_mod
implicit none
integer::ilevel
real(dp)::dt,econs,mcons,ttend,momcons
real(dp),save::ttstart=0
integer::i,itest,info
! Local constants
dt=dtnew(ilevel)
itest=0
#ifndef WITHOUTMPI
... | Fortran | null | 4,488 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rhd/condinit.f90 | !================================================================
!================================================================
!================================================================
!================================================================
subroutine condinit(x,u,dx,nn)
use amr_parameters
u... | Fortran | null | 2,284 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rhd/adaptive_loop.f90 | subroutine adaptive_loop
use amr_commons
use hydro_commons
use pm_commons
use poisson_commons
use cooling_module
use mpi_mod
implicit none
integer::ilevel,idim,ivar,info,i
real(dp)::tt1,tt2
#ifndef WITHOUTMPI
tt1=MPI_WTIME()
#endif
call init_amr ! Initialize AMR variables
... | Fortran | null | 3,256 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rhd/hydro_flag.f90 | subroutine hydro_flag(ilevel)
use amr_commons
use hydro_commons
implicit none
integer::ilevel
! -------------------------------------------------------------------
! This routine flag for refinement cells that satisfies
! some user-defined physical criteria at the level ilevel.
! -----------------------... | Fortran | null | 5,986 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rhd/umuscl.f90 | ! ---------------------------------------------------------------
! UNSPLIT Unsplit second order Godunov integrator for
! polytropic relativistic gas dynamics using MUSCL-HANCOCK with
! hll and hllc riemann solver
! with various slope limiters (moncen crashes for the moment)... | Fortran | null | 59,372 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rhd/write_screen.f90 | subroutine write_screen
use amr_commons
use hydro_commons
use pm_commons
use mpi_mod
implicit none
!
integer::igrid,jgrid,ind,icpu,info
integer::i,icell,ncell,ilevel,ncache
integer::icellmin,nx_loc
real(dp)::dx,scale,smallp,ddd,ppp
integer ,dimension(:),allocatable::ind_grid,ind_cell,ind_sort... | Fortran | null | 9,363 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rhd/uplmde.f90 | !###########################################################
!###########################################################
!###########################################################
!###########################################################
subroutine tracex(q,dq,c, qm,qp,dx,dt,ngrid)
use amr_parameters
use hydr... | Fortran | null | 23,325 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rhd/init_hydro.f90 | subroutine init_hydro
use amr_commons
use hydro_commons
use mpi_mod
implicit none
integer::ncell,ncache,iskip,igrid,i,ilevel,ind,ivar
integer::nvar2,ilevel2,numbl2,ilun,ibound,istart,info
integer::ncpu2,ndim2,nlevelmax2,nboundary2
integer ,dimension(:),allocatable::ind_grid
real(dp),dimension(:),alloc... | Fortran | null | 4,820 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rhd/godunov_utils.f90 |
!###########################################################
!###########################################################
!###########################################################
!###########################################################
subroutine cmpdt(uu,gg,dx,dt,ncell)
use amr_parameters
use hydro_parame... | Fortran | null | 18,534 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rhd/output_hydro.f90 | subroutine backup_hydro(filename)
use amr_commons
use hydro_commons
implicit none
character(LEN=80)::filename
integer::i,ivar,ncache,ind,ilevel,igrid,iskip,ilun,istart,ibound
integer,allocatable,dimension(:)::ind_grid
real(dp),allocatable,dimension(:)::xdp
real(dp),allocatable,dimension(:,:)::qq ! prim... | Fortran | null | 4,961 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rhd/courant_fine.f90 | subroutine courant_fine(ilevel)
use amr_commons
use hydro_commons
use poisson_commons
use mpi_mod
implicit none
integer::ilevel
!----------------------------------------------------------------------
! Using the Courant-Friedrich-Levy stability condition, !
! this routine computes the ma... | Fortran | null | 4,130 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rhd/init_flow_fine.f90 | !################################################################
!################################################################
!################################################################
!################################################################
subroutine init_flow
use amr_commons
use hydro_commo... | Fortran | null | 16,849 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rhd/interpol_hydro.f90 | !###########################################################
!###########################################################
!###########################################################
!###########################################################
subroutine upload_fine(ilevel)
use amr_commons
use hydro_commons
impli... | Fortran | null | 18,828 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rhd/hydro_parameters.f90 | module hydro_parameters
use amr_parameters
! Number of independant variables
#ifndef NENER
integer,parameter::nener=0
#else
integer,parameter::nener=NENER
#endif
#ifndef NVAR
integer,parameter::nvar=5
#else
integer,parameter::nvar=NVAR
#endif
! Size of hydro kernel
integer,parameter::iu1=-1
integer,p... | Fortran | null | 2,411 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rhd/hydro_commons.f90 | module hydro_commons
use amr_parameters
use hydro_parameters
real(dp),allocatable,dimension(:,:)::uold,unew ! State vector and its update
real(dp),allocatable,dimension(:)::pstarold,pstarnew ! Stellar momentum and its update
real(dp),allocatable,dimension(:)::divu,enew ! Non conservative variables
real(dp),... | Fortran | null | 921 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rhd/read_hydro_params.f90 | subroutine read_hydro_params(nml_ok)
use amr_commons
use hydro_commons
use mpi_mod
implicit none
logical::nml_ok
!--------------------------------------------------
! Local variables
!--------------------------------------------------
integer::i,idim,nboundary_true=0
integer ,dimension(1:MAXBOUND)::... | Fortran | null | 8,565 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rhd/test_suite/2D_blast_wave/condinit.f90 | !================================================================
!================================================================
!================================================================
!================================================================
subroutine condinit(x,u,dx,nn)
use amr_parameters
us... | Fortran | null | 2,507 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rhd/test_suite/jet/condinit.f90 | !================================================================
!================================================================
!================================================================
!================================================================
subroutine condinit(x,u,dx,nn)
use amr_parameters
us... | Fortran | null | 2,410 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rhd/test_suite/jet/boundana.f90 | !############################################################
!############################################################
!############################################################
!############################################################
subroutine boundana(x,u,dx,ibound,ncell)
use amr_parameters, ONLY: dp,... | Fortran | null | 2,129 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rhd/test_suite/jet/read_hydro_params.f90 | subroutine read_hydro_params(nml_ok)
use amr_commons
use hydro_commons
use mpi_mod
implicit none
logical::nml_ok
!--------------------------------------------------
! Local variables
!--------------------------------------------------
integer::i,idim,nboundary_true=0
integer ,dimension(1:MAXBOUND)::... | Fortran | null | 8,586 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rhd/test_suite/jet/hydro_boundary.f90 | !################################################################
!################################################################
!################################################################
!################################################################
subroutine make_boundary_hydro(ilevel)
use amr_commons... | Fortran | null | 7,694 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | rhd/test_suite/3D_blast_wave/condinit.f90 | !================================================================
!================================================================
!================================================================
!================================================================
subroutine condinit(x,u,dx,nn)
use amr_parameters
us... | Fortran | null | 2,545 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | turb/read_turb_fields.f90 | #if USE_TURB==1
subroutine read_turb_fields
use turb_commons
implicit none
integer :: ilun, nturbtemp_tmp
character(LEN=256) :: filedir
logical :: ok
character(LEN=5) :: nchar
character(len=16) :: precision_str_tmp
real(dp) :: aux
character(len=17) :: turb... | Fortran | null | 1,806 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | turb/turb_commons.f90 | #if USE_TURB==1
module turb_commons
use amr_commons
use turb_parameters
real(dp), allocatable :: fturb(:,:) ! Turbulent force
complex(cdp), allocatable :: turb_last(:,:,:,:) ! Turbulent spectrum at time = t
complex(cdp), allocatable :: turb_next(:,:,:,:) ! Turbulent spectrum at time = t + d... | Fortran | null | 1,564 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | turb/turb_check_time.f90 | #if USE_TURB==1
subroutine turb_check_time
use amr_commons
use turb_commons
implicit none
real(kind=dp) :: turb_last_tfrac ! Time fraction since last
real(kind=dp) :: turb_next_tfrac ! Time fraction until next
if (turb_type == 3) then
! decaying turbulence
afield_now = 0.0_... | Fortran | null | 1,117 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | turb/read_turb_params.f90 | #if USE_TURB==1
subroutine read_turb_params(nml_ok)
use amr_commons
use turb_commons
implicit none
logical, intent(inout) ::nml_ok
!--------------------------------------------------
! Namelist definitions
!--------------------------------------------------
namelist/turb_params/turb, turb_seed, turb_ty... | Fortran | null | 1,613 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | turb/turb_force_utils.f90 | #if USE_TURB==1
! TURB_FORCE_UTILS.F90
! A.McLeod - 24/11/2012
! Utility routines for turbulent forcing
! ============================================================================
#if NDIM==3
#define HERMITIAN_FIELD 1
#endif
#ifdef NPRE
#if !(NPRE==4)
#define DOUBLE_PRECISION 1
#endif
#endif
#define PI 3.14159265... | Fortran | null | 24,900 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | turb/mpi_share_turb_fields.f90 | #if USE_TURB==1
! MPI_SHARE_TURB_FIELDS.F90
! A.McLeod - 24/11/2012
! Share turbulent acceleration fields to non-root tasks
! ============================================================================
#ifndef WITHOUTMPI
subroutine mpi_share_turb_fields(include_last)
use turb_commons
use mpi_mod
implicit none
... | Fortran | null | 1,366 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | turb/turb_parameters.f90 | #if USE_TURB==1
module turb_parameters
use amr_parameters
integer, parameter :: ILP = selected_int_kind(r=15) ! integer long precision
! Precision string
#ifndef NPRE
integer,parameter::cdp=kind((1.0E0, 1.0E0)) ! default
character(len=16), parameter :: precision_str='SINGLE_PRECISION'
#else
#if NPRE==4
i... | Fortran | null | 2,191 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | turb/turb_next_field.f90 | #if USE_TURB==1
! TURB_NEXT_FIELD.F90
! A.McLeod - 24/11/2012
! Generate next turbulent field
! ============================================================================
subroutine turb_next_field
use turb_commons
implicit none
! Set turbulent field times
turb_last_time = turb_next_time
turb_next_tim... | Fortran | null | 884 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | turb/write_turb_fields.f90 | #if USE_TURB==1
subroutine write_turb_fields(output_dir)
use turb_commons
implicit none
integer :: ilun ! File I/O unit
character(len=*), intent(in) :: output_dir ! Output directory
character(len=8) :: file_ext ! String version of nturbtemp
character(len=50... | Fortran | null | 2,358 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | turb/init_turb.f90 | #if USE_TURB==1
subroutine init_turb
use turb_commons
implicit none
!--------------------------------------------------
! Local variables
!--------------------------------------------------
integer :: i, j, k ! Loop variables
integer :: k_vec(1:3) ! Wavevector
... | Fortran | null | 7,086 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | turb/add_turb_forcing.f90 | #if USE_TURB==1
subroutine calc_turb_forcing(ilevel)
use amr_commons
use hydro_commons
use turb_commons
implicit none
integer::ilevel
!-------------------------------------------------------------------
! Calculate forcing from turbulent accelerations
! Similar to analytical gravity in force_fine
!---... | Fortran | null | 2,825 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/build.default.sh | #!/bin/bash
cd bin
make NDIM=3 MPI=1 DEBUG=1
| Shell | null | 46 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/run_test_suite.sh | #!/bin/bash
#######################################################################
#
# Script to run the RAMSES test suite
#
# Neil Vaytet (ENS Lyon) - 07/2014 - neil.vaytet@ens-lyon.fr
# Neil Vaytet (NBI Copenhagen) - 11/2017 - neil.vaytet@nbi.ku.dk
#
# Usage:
# ./run_test_suite.sh
#
# Options:
# - Run the suite... | Shell | null | 16,571 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/daily_test.sh | #!/bin/bash
############################################################################
# Ramses Daily Build Script
#
# Neil Vaytet (ENS Lyon) - 07/2014 - neil.vaytet@ens-lyon.fr
#
# This script runs the RAMSES test suite at regular time intervals.
# It is currently configured to perform the test suite every day at 3... | Shell | null | 5,750 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/build.rt.sh | #!/bin/bash
cd bin
make NDIM=3 RT=1 NIONS=3 NGROUPS=3 MPI=0 DEBUG=1
| Shell | null | 69 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/update_testpage.py | import sys
import glob
from datetime import date, timedelta, datetime
MonthsDict = {'Jan': 1, 'Feb': 2, 'Mar': 3,
'Apr': 4, 'May': 5, 'Jun': 6,
'Jul': 7, 'Aug': 8, 'Sep': 9,
'Oct': 10, 'Nov': 11, 'Dec': 12}
MonthsDictReverse = dict((v, k) for k, v in MonthsDict.items())
de... | Python | null | 5,934 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/mhd/imhd-tube/plot-imhd-tube.py | import matplotlib as mpl
mpl.use('Agg')
import numpy as np
import matplotlib.pyplot as plt
import visu_ramses
fig = plt.figure()
ratio = 0.8
sizex = 12.0
fig.set_size_inches(sizex,ratio*sizex)
ax1 = plt.subplot(221)
ax2 = plt.subplot(222)
ax3 = plt.subplot(223)
ax4 = plt.subplot(224)
ax5 = ax1.twinx()
# Load RAMSES ... | Python | null | 1,799 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/mhd/imhd-tube/config.txt | FLAGS: NDIM=1 PATCH= SOLVER=mhd
| Text | null | 32 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/mhd/orszag-tang/plot-orszag-tang.py | import matplotlib as mpl
mpl.use('Agg')
import numpy as np
import matplotlib.pyplot as plt
import visu_ramses
from scipy.interpolate import griddata
fig = plt.figure()
ratio = 0.75
sizex = 12.0
fig.set_size_inches(sizex,ratio*sizex)
ax1 = fig.add_subplot(221)
ax2 = fig.add_subplot(222)
ax3 = fig.add_subplot(223)
ax4 ... | Python | null | 2,608 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/mhd/orszag-tang/config.txt | FLAGS: NDIM=2 PATCH=../tests/mhd/orszag-tang SOLVER=mhd
| Text | null | 56 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/mhd/orszag-tang/condinit.f90 | !================================================================
!================================================================
!================================================================
!================================================================
subroutine condinit(x,u,dx,nn)
use amr_parameters
us... | Fortran | null | 4,896 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/visu/visu_ramses.py | import numpy as np
import struct
import math
def read_descriptor(fname):
try:
with open(fname) as f:
content = f.readlines()
except IOError:
# Clean exit if the file was not found
print("file descriptor not found: %s" % fname)
return [], []
list_vars = []
dty... | Python | null | 26,416 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/tracer/sedov/config.txt | FLAGS: NDIM=2 PATCH= SOLVER=hydro
| Text | null | 34 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/tracer/sedov/plot-sedov.py | import matplotlib as mpl
mpl.use("Agg")
import numpy as np
import matplotlib.pyplot as plt
import visu_ramses
from scipy.interpolate import griddata
fig = plt.figure(constrained_layout=True, figsize=(12, 6))
axes = fig.subplots(nrows=2, ncols=3)
# Load RAMSES output
data = visu_ramses.load_snapshot(2)
x = data["data... | Python | null | 3,996 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/poisson/ana-disk-potential/config.txt | FLAGS: NDIM=2 PATCH=../tests/poisson/ana-disk-potential SOLVER=hydro
| Text | null | 69 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/poisson/ana-disk-potential/plot-ana-disk-potential.py | import matplotlib as mpl
mpl.use('Agg')
import numpy as np
import matplotlib.pyplot as plt
import visu_ramses
# Fundamental constants
MH = 1.6605390e-24 #g # hydrogen mass
KB = 1.3806490e-16 #cm^2 g s^-2 K^-1 # Boltzman constant
PC = 3.0856776e+18
MYR = 3.15576000e+13
unit_d=2.3247434e-24
u... | Python | null | 1,498 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/poisson/ana-disk-potential/condinit.f90 | !================================================================
!================================================================
!================================================================
!================================================================
subroutine condinit(x,u,dx,nn)
use amr_parameters
us... | Fortran | null | 3,145 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/sink/smbh-bondi/plot-smbh-bondi.py | """Plot results of sink accretion test"""
import matplotlib
matplotlib.use('Agg')
from matplotlib import pyplot as plt
from matplotlib import ticker
import visu_ramses
import numpy as np
def get_accretion_rate(nout=0):
data = visu_ramses.load_snapshot(nout)
yr = 86400.0 * 365.25
time = data["info"]["ti... | Python | null | 1,058 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/sink/smbh-bondi/config.txt | FLAGS: NDIM=3 SOLVER=hydro PATCH=
| Text | null | 34 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/sink/smbh-bondi/README.md | * Test name: `smbh_bondi`
* Dimension: `3`
* Solver: `hydro`
* Comparison: md5sum of the sink output (`output_00002/sink_00002.csv`) at the end of the run
* Purpose: Testing the implementation of sink-SMBH Bondi-accretion
* Keywords: sink dynamics, sink accretion (Bondi), PIC
WARNING: This test uses the `experimental_... | Markdown | null | 374 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/sink/stellar-spawn/config.txt | FLAGS: NDIM=3 SOLVER=hydro PATCH=
| Text | null | 34 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/sink/stellar-spawn/plot-stellar-spawn.py | """Plot results of sink accretion test"""
import matplotlib
matplotlib.use('Agg')
from matplotlib import pyplot as plt
from matplotlib import ticker
import visu_ramses
import numpy as np
out_end = 17
# Fundamental constants
G = 6.67259e-8 #cm^3 g^-1 s^-2 # gravitational constant
YR = 3.1556926e7 #s ... | Python | null | 2,135 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/sink/spawning/plot-spawning.py | # REMARK: it is normal the reference value for density is negative. This is the sum of the log of the cell densities.
import matplotlib as mpl
mpl.use('Agg')
import numpy as np
import matplotlib.pyplot as plt
import visu_ramses
from scipy.interpolate import griddata
fig, ax = plt.subplots(nrows=1, ncols=3, figsize=(1... | Python | null | 2,381 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/sink/spawning/config.txt | FLAGS: NDIM=3 PATCH= SOLVER=hydro USE_TURB=1
| Text | null | 45 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/sink/stellar-HII/plot-stellar-HII.py | """Plot results of sink accretion test"""
import matplotlib
matplotlib.use('Agg')
from matplotlib import pyplot as plt
from matplotlib import ticker
import visu_ramses
import numpy as np
from scipy.interpolate import griddata
out_end = 2
# Fundamental constants
G = 6.67259e-8 #cm^3 g^-1 s^-2 # gravitatio... | Python | null | 3,478 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/sink/stellar-HII/config.txt | FLAGS: NDIM=3 SOLVER=hydro RT=1 NGROUPS=3 NIONS=3 PATCH=
| Text | null | 57 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/sink/levelhack/plot-levelhack.py | """Plot results of sink accretion test"""
import matplotlib
matplotlib.use('Agg')
from matplotlib import pyplot as plt
from matplotlib import ticker
import visu_ramses
import numpy as np
def get_accretion_rate(nout=0):
data = visu_ramses.load_snapshot(nout)
yr = 86400.0 * 365.25
time = data["info"]["ti... | Python | null | 1,056 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/sink/levelhack/config.txt | FLAGS: NDIM=3 SOLVER=hydro PATCH=
| Text | null | 34 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/sink/center-SN/config.txt | FLAGS: NDIM=3 SOLVER=hydro PATCH=
| Text | null | 34 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/sink/center-SN/plot-center-SN.py | """Plot results of sink accretion test"""
import matplotlib
matplotlib.use('Agg')
from matplotlib import pyplot as plt
from matplotlib import ticker
import visu_ramses
import numpy as np
from scipy.interpolate import griddata
out_end = 2
# Fundamental constants
G = 6.67259e-8 #cm^3 g^-1 s^-2 # gravitatio... | Python | null | 2,400 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/hydro/barotrop/config.txt | FLAGS: NDIM=1 PATCH= SOLVER=hydro
| Text | null | 34 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/hydro/barotrop/plot-barotrop.py | import matplotlib as mpl
mpl.use('Agg')
import numpy as np
import matplotlib.pyplot as plt
import visu_ramses
# Fundamental constants
G = 6.67259e-8 #cm^3 g^-1 s^-2 # gravitational constant
YR = 3.1556926e7 #s # 1 year
MSUN = 1.989e33 #g # solar mass
MH = 1.67... | Python | null | 1,995 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/hydro/isothermal/config.txt | FLAGS: NDIM=1 PATCH= SOLVER=hydro
| Text | null | 34 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/hydro/isothermal/plot-isothermal.py | import matplotlib as mpl
mpl.use('Agg')
import numpy as np
import matplotlib.pyplot as plt
import visu_ramses
# Fundamental constants
G = 6.67259e-8 #cm^3 g^-1 s^-2 # gravitational constant
YR = 3.1556926e7 #s # 1 year
MSUN = 1.989e33 #g # solar mass
MH = 1.67... | Python | null | 1,950 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/hydro/implosion/plot-implosion.py | import matplotlib as mpl
mpl.use('Agg')
import numpy as np
import matplotlib.pyplot as plt
import visu_ramses
from scipy.interpolate import griddata
fig, ax = plt.subplots(nrows=2, ncols=3, figsize=(12, 6))
# Load RAMSES output
data = visu_ramses.load_snapshot(2)
x = data["data"]["x"]
y = data["data"]["y"]
... | Python | null | 2,394 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/hydro/implosion/config.txt | FLAGS: NDIM=2 PATCH= SOLVER=hydro
| Text | null | 34 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/hydro/cooling-frig/plot-cooling-frig.py | import matplotlib as mpl
mpl.use('Agg')
import numpy as np
import matplotlib.pyplot as plt
import visu_ramses
from scipy.interpolate import griddata
fig, ax = plt.subplots(nrows=1, ncols=1, figsize=(8, 8))
# Load RAMSES output
data = visu_ramses.load_snapshot(2)
units_density=2.3247434e-24
units_time = 2.5395079e15
u... | Python | null | 1,036 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/hydro/cooling-frig/config.txt | FLAGS: NDIM=3 PATCH= SOLVER=hydro USE_TURB=1
| Text | null | 45 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/hydro/sod-tube/config.txt | FLAGS: NDIM=1 PATCH= SOLVER=hydro
| Text | null | 34 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/hydro/sod-tube/plot-sod-tube.py | import matplotlib as mpl
mpl.use('Agg')
import numpy as np
import matplotlib.pyplot as plt
import visu_ramses
fig = plt.figure(figsize=(8, 12))
ax1 = plt.subplot(311)
ax2 = plt.subplot(312)
ax3 = plt.subplot(313)
ax5 = ax1.twinx()
# Load RAMSES output
data = visu_ramses.load_snapshot(2)
order = data["data"]["x"].ar... | Python | null | 1,451 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/turb/driving/config.txt | FLAGS: NDIM=3 PATCH= SOLVER=hydro USE_TURB=1
| Text | null | 45 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/turb/driving/plot-driving.py | # REMARK: it is normal the reference value for density is negative. This is the sum of the log of the cell densities.
import matplotlib as mpl
mpl.use('Agg')
import numpy as np
import matplotlib.pyplot as plt
import visu_ramses
from scipy.interpolate import griddata
fig, ax = plt.subplots(nrows=3, ncols=3, figsize=(1... | Python | null | 3,705 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/rt/stromgren2d/README.md | * Test name: `stromgren2d`
* Dimension: `2`
* Solver: `hydro`
* Comparison: md5sum of the amr2map denisty map of output_00046
* Purpose: Testing the RT implementation
* Keywords: RT, Stromgren
| Markdown | null | 195 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/rt/stromgren2d/config.txt | FLAGS: NDIM=2 SOLVER=hydro RT=1 NGROUPS=3 NIONS=3 NMETALS=1 PATCH=
| Text | null | 67 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | tests/rt/stromgren2d/plot-stromgren2d.py | import matplotlib as mpl
mpl.use('Agg')
import numpy as np
import matplotlib.pyplot as plt
from scipy.interpolate import griddata
import visu_ramses
# Make figure
fig = plt.figure()
ratio = 0.75
sizex = 12.0
fig.set_size_inches(sizex,ratio*sizex)
ax1 = fig.add_subplot(221)
ax2 = fig.add_subplot(222)
ax3 = fig.add_sub... | Python | null | 3,900 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | patch/6eq/phases_exp.py | # String searching library
import re
# Standard libraries
import os
import numpy as np
import pandas as pd
from functools import partial
from scipy import constants
from scipy.io import FortranFile
from scipy.optimize import newton
# Declaring functions
# Newton iteration functions to find the saturation pressure/c... | Python | null | 7,007 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | patch/6eq/read_hydro_params.f90 | subroutine read_hydro_params(nml_ok)
use amr_commons
use hydro_commons
use mpi_mod
implicit none
logical::nml_ok,inv
!--------------------------------------------------
! Local variables
!--------------------------------------------------
integer::i,idim,imat
integer ,dimension(1:MAXBOUND)::bound_... | Fortran | null | 9,289 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | patch/6eq/umuscl.f90 | ! ---------------------------------------------------------------
! UNSPLIT Unsplit second order Godunov integrator for
! real gases (arbitrary EOS) dynamics using
! MUSCL-HANCOCK scheme
! with various slope limiters.
!
! inputs/outputs
! uin => (const) input stat... | Fortran | null | 59,398 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | patch/6eq/hydro_parameters.f90 | module hydro_parameters
#ifdef grackle
use grackle_parameters
#endif
use amr_parameters
! Number of independant variables
#ifndef NMAT
integer,parameter::nmat=2
#else
integer,parameter::nmat=NMAT
#endif
integer,parameter::nener=0
#ifndef NVAR
integer,parameter::nvar=ndim+3*nmat
integer,parameter::npri... | Fortran | null | 2,949 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | patch/6eq/hydro_flag.f90 | subroutine hydro_flag(ilevel)
use amr_commons
use hydro_commons
implicit none
integer::ilevel
! -------------------------------------------------------------------
! This routine flag for refinement cells that satisfies
! some user-defined physical criteria at the level ilevel.
! ----------------------... | Fortran | null | 4,003 |
[ascl:1011.007] | https://bitbucket.org/rteyssie/ramses | patch/6eq/hydro_commons.f90 | module hydro_commons
use amr_parameters
use hydro_parameters
real(dp),allocatable,dimension(:,:)::uold,unew ! State vector and its update
real(dp),allocatable,dimension(:,:)::fluxes ! Mass flux on the faces of the cells
real(dp),allocatable,dimension(:)::pstarold,pstarnew ! Stellar momentum and its update
r... | Fortran | null | 1,006 |
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