| --- |
| language: |
| - en |
| task_categories: |
| - text-generation |
| - feature-extraction |
| tags: |
| - chemistry |
| - nmr |
| - smiles |
| - molecules |
| - spectroscopy |
| pretty_name: SA-MolNMR Experimental Dataset |
| size_categories: |
| - 1M<n<10M |
| configs: |
| - config_name: default |
| data_files: |
| - split: train |
| path: data/train.parquet |
| - split: validation |
| path: data/validation.parquet |
| - split: test |
| path: data/test.parquet |
| --- |
| |
| # SA-MolNMR Experimental Dataset |
|
|
| This dataset contains processed experimental molecular NMR records. Each example includes a SMILES string, molecular formula, atom count, and tokenized NMR input containing both proton NMR and carbon NMR data. |
|
|
| ## Dataset Details |
|
|
| The dataset is organized into train, validation, and test splits: |
|
|
| | Split | Examples | |
| |---|---:| |
| | Train | 937,022 | |
| | Validation | 117,035 | |
| | Test | 117,205 | |
| | Total | 1,171,262 | |
|
|
| The train, validation, and test splits contain no overlapping `id` or `smiles` values. |
|
|
| ## Features |
|
|
| Each row contains the following fields: |
|
|
| | Field | Type | Description | |
| |---|---|---| |
| | `id` | integer | Unique example identifier. | |
| | `smiles` | string | Molecular structure represented as a SMILES string. | |
| | `atom_count` | integer | Number of atoms in the molecule. | |
| | `molecular_formula` | string | Molecular formula. | |
| | `tokenized_input` | string | JSON string containing both `1HNMR` and `13CNMR`. | |
| | `nmr_1h` | string | JSON string containing the proton NMR peak list. | |
| | `nmr_13c` | string | JSON string containing the carbon NMR chemical shifts. | |
|
|
| The `1HNMR` field is represented as a list of peaks. Each peak follows this structure: |
|
|
| ```text |
| [chemical_shift, range_or_uncertainty, multiplicity, integration, coupling_constants] |
| ``` |
|
|
| The `13CNMR` field is represented as a list of carbon chemical shifts. |
|
|
| ## Example |
|
|
| ```json |
| { |
| "id": 503800, |
| "smiles": "CN1C(=O)C2(C)Cc3ccccc3C2(CC(=O)c2ccc(Br)cc2)c2ccccc21", |
| "atom_count": 52, |
| "molecular_formula": "C26H22BrNO2", |
| "tokenized_input": "{\"1HNMR\": [[7.635, 0.0, \"m\", \"3H\", []]], \"13CNMR\": [196.3, 173.3, 147.7]}", |
| "nmr_1h": "[[7.635, 0.0, \"m\", \"3H\", []]]", |
| "nmr_13c": "[196.3, 173.3, 147.7]" |
| } |
| ``` |
|
|
| ## Intended Uses |
|
|
| This dataset can be used for molecular representation learning, NMR-conditioned molecular modeling, structure elucidation, and related cheminformatics tasks. |
|
|
| ## Data Statistics |
|
|
| Across the dataset: |
|
|
| - `tokenized_input` is valid JSON for all examples. |
| - Every example contains both `1HNMR` and `13CNMR`. |
| - There are no missing values in the core fields. |
| - The average molecule contains about 42 atoms. |
| - The average example contains about 9 proton NMR peaks and 15 carbon NMR shifts. |
|
|
| ## License |
|
|
| Please specify the license before using or redistributing this dataset. |
|
|