Datasets:
SunnyLin
/
GCF-GRCh38-p14-genomic

Dataset card Data Studio Files
xet
 Community
1
seqid
stringclasses
705 values
source
stringclasses
9 values
type
stringclasses
73 values
start
int64
1
249M
end
int64
61
249M
score
stringlengths
1
7
strand
stringclasses
3 values
phase
stringclasses
4 values
attributes
stringlengths
52
3.21k
NC_000001.11
RefSeqFE
biological_region
172,707
173,207
.
+
.
{"ID": "id-GeneID:127266739-2", "Dbxref": "GeneID:127266739", "Name": "biological region", "gbkey": "Region", "standard_name": "H3K4me1 hESC enhancer GRCh37_chr1:172707-173207"}
NC_000001.11
Gnomon
gene
177,308
180,105
.
-
.
{"ID": "gene-LOC124903814", "Dbxref": "GeneID:124903814", "Name": "LOC124903814", "description": "uncharacterized LOC124903814", "gbkey": "Gene", "gene": "LOC124903814", "gene_biotype": "lncRNA"}
NC_000001.11
Gnomon
lnc_RNA
177,308
180,105
.
-
.
{"ID": "rna-XR_007065332.1", "Parent": "gene-LOC124903814", "Dbxref": ["GeneID:124903814", "GenBank:XR_007065332.1"], "Name": "XR_007065332.1", "experiment": "COORDINATES: polyA evidence [ECO:0006239]", "gbkey": "ncRNA", "gene": "LOC124903814", "model_evidence": "Supporting evidence includes similarity to: 1 EST%2C 6 l...
NC_000001.11
Gnomon
exon
177,682
180,105
.
-
.
{"ID": "exon-XR_007065332.1-1", "Parent": "rna-XR_007065332.1", "Dbxref": ["GeneID:124903814", "GenBank:XR_007065332.1"], "experiment": "COORDINATES: polyA evidence [ECO:0006239]", "gbkey": "ncRNA", "gene": "LOC124903814", "product": "uncharacterized LOC124903814%2C transcript variant X1", "transcript_id": "XR_00706533...
NC_000001.11
Gnomon
exon
177,308
177,585
.
-
.
{"ID": "exon-XR_007065332.1-2", "Parent": "rna-XR_007065332.1", "Dbxref": ["GeneID:124903814", "GenBank:XR_007065332.1"], "experiment": "COORDINATES: polyA evidence [ECO:0006239]", "gbkey": "ncRNA", "gene": "LOC124903814", "product": "uncharacterized LOC124903814%2C transcript variant X1", "transcript_id": "XR_00706533...
NC_000001.11
Gnomon
lnc_RNA
177,308
180,105
.
-
.
{"ID": "rna-XR_007065333.1", "Parent": "gene-LOC124903814", "Dbxref": ["GeneID:124903814", "GenBank:XR_007065333.1"], "Name": "XR_007065333.1", "experiment": "COORDINATES: polyA evidence [ECO:0006239]", "gbkey": "ncRNA", "gene": "LOC124903814", "model_evidence": "Supporting evidence includes similarity to: 1 EST%2C 6 l...
NC_000001.11
Gnomon
exon
177,682
180,105
.
-
.
{"ID": "exon-XR_007065333.1-1", "Parent": "rna-XR_007065333.1", "Dbxref": ["GeneID:124903814", "GenBank:XR_007065333.1"], "experiment": "COORDINATES: polyA evidence [ECO:0006239]", "gbkey": "ncRNA", "gene": "LOC124903814", "product": "uncharacterized LOC124903814%2C transcript variant X2", "transcript_id": "XR_00706533...
NC_000001.11
Gnomon
exon
177,308
177,588
.
-
.
{"ID": "exon-XR_007065333.1-2", "Parent": "rna-XR_007065333.1", "Dbxref": ["GeneID:124903814", "GenBank:XR_007065333.1"], "experiment": "COORDINATES: polyA evidence [ECO:0006239]", "gbkey": "ncRNA", "gene": "LOC124903814", "product": "uncharacterized LOC124903814%2C transcript variant X2", "transcript_id": "XR_00706533...
NC_000001.11
Gnomon
lnc_RNA
177,308
180,105
.
-
.
{"ID": "rna-XR_007065334.1", "Parent": "gene-LOC124903814", "Dbxref": ["GeneID:124903814", "GenBank:XR_007065334.1"], "Name": "XR_007065334.1", "experiment": "COORDINATES: polyA evidence [ECO:0006239]", "gbkey": "ncRNA", "gene": "LOC124903814", "model_evidence": "Supporting evidence includes similarity to: 1 EST%2C 6 l...
NC_000001.11
Gnomon
exon
177,678
180,105
.
-
.
{"ID": "exon-XR_007065334.1-1", "Parent": "rna-XR_007065334.1", "Dbxref": ["GeneID:124903814", "GenBank:XR_007065334.1"], "experiment": "COORDINATES: polyA evidence [ECO:0006239]", "gbkey": "ncRNA", "gene": "LOC124903814", "product": "uncharacterized LOC124903814%2C transcript variant X3", "transcript_id": "XR_00706533...
NC_000001.11
Gnomon
exon
177,308
177,588
.
-
.
{"ID": "exon-XR_007065334.1-2", "Parent": "rna-XR_007065334.1", "Dbxref": ["GeneID:124903814", "GenBank:XR_007065334.1"], "experiment": "COORDINATES: polyA evidence [ECO:0006239]", "gbkey": "ncRNA", "gene": "LOC124903814", "product": "uncharacterized LOC124903814%2C transcript variant X3", "transcript_id": "XR_00706533...
NC_000001.11
BestRefSeq
pseudogene
182,388
184,878
.
+
.
{"ID": "gene-DDX11L17", "Dbxref": ["GeneID:102725121", "HGNC:HGNC:55080"], "Name": "DDX11L17", "description": "DEAD/H-box helicase 11 like 17 (pseudogene)", "gbkey": "Gene", "gene": "DDX11L17", "gene_biotype": "transcribed_pseudogene", "pseudo": "true"}
NC_000001.11
BestRefSeq
transcript
182,388
184,878
.
+
.
{"ID": "rna-NR_148357.1", "Parent": "gene-DDX11L17", "Dbxref": ["GeneID:102725121", "GenBank:NR_148357.1", "HGNC:HGNC:55080"], "Name": "NR_148357.1", "gbkey": "misc_RNA", "gene": "DDX11L17", "product": "DEAD/H-box helicase 11 like 17 (pseudogene)", "pseudo": "true", "transcript_id": "NR_148357.1"}
NC_000001.11
BestRefSeq
exon
182,388
182,746
.
+
.
{"ID": "exon-NR_148357.1-1", "Parent": "rna-NR_148357.1", "Dbxref": ["GeneID:102725121", "GenBank:NR_148357.1", "HGNC:HGNC:55080"], "gbkey": "misc_RNA", "gene": "DDX11L17", "product": "DEAD/H-box helicase 11 like 17 (pseudogene)", "pseudo": "true", "transcript_id": "NR_148357.1"}
NC_000001.11
BestRefSeq
exon
183,132
183,240
.
+
.
{"ID": "exon-NR_148357.1-2", "Parent": "rna-NR_148357.1", "Dbxref": ["GeneID:102725121", "GenBank:NR_148357.1", "HGNC:HGNC:55080"], "gbkey": "misc_RNA", "gene": "DDX11L17", "product": "DEAD/H-box helicase 11 like 17 (pseudogene)", "pseudo": "true", "transcript_id": "NR_148357.1"}
NC_000001.11
BestRefSeq
exon
183,740
184,878
.
+
.
{"ID": "exon-NR_148357.1-3", "Parent": "rna-NR_148357.1", "Dbxref": ["GeneID:102725121", "GenBank:NR_148357.1", "HGNC:HGNC:55080"], "gbkey": "misc_RNA", "gene": "DDX11L17", "product": "DEAD/H-box helicase 11 like 17 (pseudogene)", "pseudo": "true", "transcript_id": "NR_148357.1"}
NC_000001.11
BestRefSeq
pseudogene
184,916
199,875
.
-
.
{"ID": "gene-WASH9P", "Dbxref": ["GeneID:100996442", "HGNC:HGNC:53981"], "Name": "WASH9P", "description": "WAS protein family homolog 9%2C pseudogene", "gbkey": "Gene", "gene": "WASH9P", "gene_biotype": "transcribed_pseudogene", "pseudo": "true"}
NC_000001.11
BestRefSeq
transcript
184,916
199,875
.
-
.
{"ID": "rna-NR_186787.1", "Parent": "gene-WASH9P", "Dbxref": ["GeneID:100996442", "GenBank:NR_186787.1", "HGNC:HGNC:53981"], "Name": "NR_186787.1", "gbkey": "misc_RNA", "gene": "WASH9P", "product": "WAS protein family homolog 9%2C pseudogene", "pseudo": "true", "transcript_id": "NR_186787.1"}
NC_000001.11
BestRefSeq
exon
199,837
199,875
.
-
.
{"ID": "exon-NR_186787.1-1", "Parent": "rna-NR_186787.1", "Dbxref": ["GeneID:100996442", "GenBank:NR_186787.1", "HGNC:HGNC:53981"], "gbkey": "misc_RNA", "gene": "WASH9P", "product": "WAS protein family homolog 9%2C pseudogene", "pseudo": "true", "transcript_id": "NR_186787.1"}
NC_000001.11
BestRefSeq
exon
195,263
195,416
.
-
.
{"ID": "exon-NR_186787.1-2", "Parent": "rna-NR_186787.1", "Dbxref": ["GeneID:100996442", "GenBank:NR_186787.1", "HGNC:HGNC:53981"], "gbkey": "misc_RNA", "gene": "WASH9P", "product": "WAS protein family homolog 9%2C pseudogene", "pseudo": "true", "transcript_id": "NR_186787.1"}
NC_000001.11
BestRefSeq
exon
188,791
188,902
.
-
.
{"ID": "exon-NR_186787.1-3", "Parent": "rna-NR_186787.1", "Dbxref": ["GeneID:100996442", "GenBank:NR_186787.1", "HGNC:HGNC:53981"], "gbkey": "misc_RNA", "gene": "WASH9P", "product": "WAS protein family homolog 9%2C pseudogene", "pseudo": "true", "transcript_id": "NR_186787.1"}
NC_000001.11
BestRefSeq
exon
188,439
188,584
.
-
.
{"ID": "exon-NR_186787.1-4", "Parent": "rna-NR_186787.1", "Dbxref": ["GeneID:100996442", "GenBank:NR_186787.1", "HGNC:HGNC:53981"], "gbkey": "misc_RNA", "gene": "WASH9P", "product": "WAS protein family homolog 9%2C pseudogene", "pseudo": "true", "transcript_id": "NR_186787.1"}
NC_000001.11
BestRefSeq
exon
188,130
188,266
.
-
.
{"ID": "exon-NR_186787.1-5", "Parent": "rna-NR_186787.1", "Dbxref": ["GeneID:100996442", "GenBank:NR_186787.1", "HGNC:HGNC:53981"], "gbkey": "misc_RNA", "gene": "WASH9P", "product": "WAS protein family homolog 9%2C pseudogene", "pseudo": "true", "transcript_id": "NR_186787.1"}
NC_000001.11
BestRefSeq
exon
187,755
187,890
.
-
.
{"ID": "exon-NR_186787.1-6", "Parent": "rna-NR_186787.1", "Dbxref": ["GeneID:100996442", "GenBank:NR_186787.1", "HGNC:HGNC:53981"], "gbkey": "misc_RNA", "gene": "WASH9P", "product": "WAS protein family homolog 9%2C pseudogene", "pseudo": "true", "transcript_id": "NR_186787.1"}
NC_000001.11
BestRefSeq
exon
187,380
187,577
.
-
.
{"ID": "exon-NR_186787.1-7", "Parent": "rna-NR_186787.1", "Dbxref": ["GeneID:100996442", "GenBank:NR_186787.1", "HGNC:HGNC:53981"], "gbkey": "misc_RNA", "gene": "WASH9P", "product": "WAS protein family homolog 9%2C pseudogene", "pseudo": "true", "transcript_id": "NR_186787.1"}
NC_000001.11
BestRefSeq
exon
187,129
187,287
.
-
.
{"ID": "exon-NR_186787.1-8", "Parent": "rna-NR_186787.1", "Dbxref": ["GeneID:100996442", "GenBank:NR_186787.1", "HGNC:HGNC:53981"], "gbkey": "misc_RNA", "gene": "WASH9P", "product": "WAS protein family homolog 9%2C pseudogene", "pseudo": "true", "transcript_id": "NR_186787.1"}
NC_000001.11
BestRefSeq
exon
186,317
186,469
.
-
.
{"ID": "exon-NR_186787.1-9", "Parent": "rna-NR_186787.1", "Dbxref": ["GeneID:100996442", "GenBank:NR_186787.1", "HGNC:HGNC:53981"], "gbkey": "misc_RNA", "gene": "WASH9P", "product": "WAS protein family homolog 9%2C pseudogene", "pseudo": "true", "transcript_id": "NR_186787.1"}
NC_000001.11
BestRefSeq
exon
185,491
185,559
.
-
.
{"ID": "exon-NR_186787.1-10", "Parent": "rna-NR_186787.1", "Dbxref": ["GeneID:100996442", "GenBank:NR_186787.1", "HGNC:HGNC:53981"], "gbkey": "misc_RNA", "gene": "WASH9P", "product": "WAS protein family homolog 9%2C pseudogene", "pseudo": "true", "transcript_id": "NR_186787.1"}
NC_000001.11
BestRefSeq
exon
184,916
185,350
.
-
.
{"ID": "exon-NR_186787.1-11", "Parent": "rna-NR_186787.1", "Dbxref": ["GeneID:100996442", "GenBank:NR_186787.1", "HGNC:HGNC:53981"], "gbkey": "misc_RNA", "gene": "WASH9P", "product": "WAS protein family homolog 9%2C pseudogene", "pseudo": "true", "transcript_id": "NR_186787.1"}
NC_000001.11
BestRefSeq
gene
187,891
187,958
.
-
.
{"ID": "gene-MIR6859-2", "Dbxref": ["GeneID:102465909", "HGNC:HGNC:49954", "miRBase:MI0026420"], "Name": "MIR6859-2", "description": "microRNA 6859-2", "gbkey": "Gene", "gene": "MIR6859-2", "gene_biotype": "miRNA", "gene_synonym": "hsa-mir-6859-2"}
NC_000001.11
BestRefSeq
primary_transcript
187,891
187,958
.
-
.
{"ID": "rna-NR_107062.1", "Parent": "gene-MIR6859-2", "Dbxref": ["GeneID:102465909", "GenBank:NR_107062.1", "HGNC:HGNC:49954", "miRBase:MI0026420"], "Name": "NR_107062.1", "gbkey": "precursor_RNA", "gene": "MIR6859-2", "product": "microRNA 6859-2", "transcript_id": "NR_107062.1"}
NC_000001.11
BestRefSeq
exon
187,891
187,958
.
-
.
{"ID": "exon-NR_107062.1-1", "Parent": "rna-NR_107062.1", "Dbxref": ["GeneID:102465909", "GenBank:NR_107062.1", "HGNC:HGNC:49954", "miRBase:MI0026420"], "gbkey": "precursor_RNA", "gene": "MIR6859-2", "product": "microRNA 6859-2", "transcript_id": "NR_107062.1"}
NC_000001.11
BestRefSeq
miRNA
187,891
187,913
.
-
.
{"ID": "rna-MIR6859-2", "Parent": "rna-NR_107062.1", "Dbxref": ["GeneID:102465909", "miRBase:MIMAT0027619", "HGNC:HGNC:49954", "miRBase:MI0026420"], "gbkey": "ncRNA", "gene": "MIR6859-2", "product": "hsa-miR-6859-3p"}
NC_000001.11
BestRefSeq
exon
187,891
187,913
.
-
.
{"ID": "exon-MIR6859-2-1", "Parent": "rna-MIR6859-2", "Dbxref": ["GeneID:102465909", "miRBase:MIMAT0027619", "HGNC:HGNC:49954", "miRBase:MI0026420"], "gbkey": "ncRNA", "gene": "MIR6859-2", "product": "hsa-miR-6859-3p"}
NC_000001.11
BestRefSeq
miRNA
187,931
187,953
.
-
.
{"ID": "rna-MIR6859-2-2", "Parent": "rna-NR_107062.1", "Dbxref": ["GeneID:102465909", "miRBase:MIMAT0027618", "HGNC:HGNC:49954", "miRBase:MI0026420"], "gbkey": "ncRNA", "gene": "MIR6859-2", "product": "hsa-miR-6859-5p"}
NC_000001.11
BestRefSeq
exon
187,931
187,953
.
-
.
{"ID": "exon-MIR6859-2-2-1", "Parent": "rna-MIR6859-2-2", "Dbxref": ["GeneID:102465909", "miRBase:MIMAT0027618", "HGNC:HGNC:49954", "miRBase:MI0026420"], "gbkey": "ncRNA", "gene": "MIR6859-2", "product": "hsa-miR-6859-5p"}
NC_000001.11
Curated Genomic
pseudogene
258,511
259,036
.
-
.
{"ID": "gene-RPL23AP21", "Dbxref": ["GeneID:728481", "HGNC:HGNC:35827"], "Name": "RPL23AP21", "description": "ribosomal protein L23a pseudogene 21", "gbkey": "Gene", "gene": "RPL23AP21", "gene_biotype": "pseudogene", "gene_synonym": "RPL23A_1_1", "pseudo": "true"}
NC_000001.11
Curated Genomic
exon
258,511
259,036
.
-
.
{"ID": "id-RPL23AP21", "Parent": "gene-RPL23AP21", "Dbxref": ["GeneID:728481", "HGNC:HGNC:35827"], "gbkey": "exon", "gene": "RPL23AP21", "pseudo": "true"}
NC_000001.11
BestRefSeq
gene
262,719
297,504
.
-
.
{"ID": "gene-LOC127239154", "Dbxref": "GeneID:127239154", "Name": "LOC127239154", "description": "uncharacterized LOC127239154", "gbkey": "Gene", "gene": "LOC127239154", "gene_biotype": "lncRNA"}
NC_000001.11
BestRefSeq
lnc_RNA
262,719
297,504
.
-
.
{"ID": "rna-NR_182074.1", "Parent": "gene-LOC127239154", "Dbxref": ["GeneID:127239154", "GenBank:NR_182074.1"], "Name": "NR_182074.1", "gbkey": "ncRNA", "gene": "LOC127239154", "product": "uncharacterized LOC127239154%2C transcript variant 1", "transcript_id": "NR_182074.1"}
NC_000001.11
BestRefSeq
exon
297,345
297,504
.
-
.
{"ID": "exon-NR_182074.1-1", "Parent": "rna-NR_182074.1", "Dbxref": ["GeneID:127239154", "GenBank:NR_182074.1"], "gbkey": "ncRNA", "gene": "LOC127239154", "product": "uncharacterized LOC127239154%2C transcript variant 1", "transcript_id": "NR_182074.1"}
NC_000001.11
BestRefSeq
exon
289,266
289,370
.
-
.
{"ID": "exon-NR_182074.1-2", "Parent": "rna-NR_182074.1", "Dbxref": ["GeneID:127239154", "GenBank:NR_182074.1"], "gbkey": "ncRNA", "gene": "LOC127239154", "product": "uncharacterized LOC127239154%2C transcript variant 1", "transcript_id": "NR_182074.1"}
NC_000001.11
BestRefSeq
exon
268,667
268,816
.
-
.
{"ID": "exon-NR_182074.1-3", "Parent": "rna-NR_182074.1", "Dbxref": ["GeneID:127239154", "GenBank:NR_182074.1"], "gbkey": "ncRNA", "gene": "LOC127239154", "product": "uncharacterized LOC127239154%2C transcript variant 1", "transcript_id": "NR_182074.1"}
NC_000001.11
BestRefSeq
exon
262,719
268,204
.
-
.
{"ID": "exon-NR_182074.1-4", "Parent": "rna-NR_182074.1", "Dbxref": ["GeneID:127239154", "GenBank:NR_182074.1"], "gbkey": "ncRNA", "gene": "LOC127239154", "product": "uncharacterized LOC127239154%2C transcript variant 1", "transcript_id": "NR_182074.1"}
NC_000001.11
BestRefSeq
lnc_RNA
262,719
296,312
.
-
.
{"ID": "rna-NR_182076.1", "Parent": "gene-LOC127239154", "Dbxref": ["GeneID:127239154", "GenBank:NR_182076.1"], "Name": "NR_182076.1", "gbkey": "ncRNA", "gene": "LOC127239154", "product": "uncharacterized LOC127239154%2C transcript variant 3", "transcript_id": "NR_182076.1"}
NC_000001.11
BestRefSeq
exon
296,216
296,312
.
-
.
{"ID": "exon-NR_182076.1-1", "Parent": "rna-NR_182076.1", "Dbxref": ["GeneID:127239154", "GenBank:NR_182076.1"], "gbkey": "ncRNA", "gene": "LOC127239154", "product": "uncharacterized LOC127239154%2C transcript variant 3", "transcript_id": "NR_182076.1"}
NC_000001.11
BestRefSeq
exon
268,667
268,816
.
-
.
{"ID": "exon-NR_182076.1-2", "Parent": "rna-NR_182076.1", "Dbxref": ["GeneID:127239154", "GenBank:NR_182076.1"], "gbkey": "ncRNA", "gene": "LOC127239154", "product": "uncharacterized LOC127239154%2C transcript variant 3", "transcript_id": "NR_182076.1"}
NC_000001.11
BestRefSeq
exon
262,719
268,204
.
-
.
{"ID": "exon-NR_182076.1-3", "Parent": "rna-NR_182076.1", "Dbxref": ["GeneID:127239154", "GenBank:NR_182076.1"], "gbkey": "ncRNA", "gene": "LOC127239154", "product": "uncharacterized LOC127239154%2C transcript variant 3", "transcript_id": "NR_182076.1"}
NC_000001.11
BestRefSeq
lnc_RNA
262,719
296,312
.
-
.
{"ID": "rna-NR_182075.1", "Parent": "gene-LOC127239154", "Dbxref": ["GeneID:127239154", "GenBank:NR_182075.1"], "Name": "NR_182075.1", "gbkey": "ncRNA", "gene": "LOC127239154", "product": "uncharacterized LOC127239154%2C transcript variant 2", "transcript_id": "NR_182075.1"}
NC_000001.11
BestRefSeq
exon
296,216
296,312
.
-
.
{"ID": "exon-NR_182075.1-1", "Parent": "rna-NR_182075.1", "Dbxref": ["GeneID:127239154", "GenBank:NR_182075.1"], "gbkey": "ncRNA", "gene": "LOC127239154", "product": "uncharacterized LOC127239154%2C transcript variant 2", "transcript_id": "NR_182075.1"}
NC_000001.11
BestRefSeq
exon
289,266
289,370
.
-
.
{"ID": "exon-NR_182075.1-2", "Parent": "rna-NR_182075.1", "Dbxref": ["GeneID:127239154", "GenBank:NR_182075.1"], "gbkey": "ncRNA", "gene": "LOC127239154", "product": "uncharacterized LOC127239154%2C transcript variant 2", "transcript_id": "NR_182075.1"}
NC_000001.11
BestRefSeq
exon
268,667
268,816
.
-
.
{"ID": "exon-NR_182075.1-3", "Parent": "rna-NR_182075.1", "Dbxref": ["GeneID:127239154", "GenBank:NR_182075.1"], "gbkey": "ncRNA", "gene": "LOC127239154", "product": "uncharacterized LOC127239154%2C transcript variant 2", "transcript_id": "NR_182075.1"}
NC_000001.11
BestRefSeq
exon
262,719
268,204
.
-
.
{"ID": "exon-NR_182075.1-4", "Parent": "rna-NR_182075.1", "Dbxref": ["GeneID:127239154", "GenBank:NR_182075.1"], "gbkey": "ncRNA", "gene": "LOC127239154", "product": "uncharacterized LOC127239154%2C transcript variant 2", "transcript_id": "NR_182075.1"}
NC_000001.11
Gnomon
gene
273,223
284,291
.
+
.
{"ID": "gene-LOC124903815", "Dbxref": "GeneID:124903815", "Name": "LOC124903815", "description": "uncharacterized LOC124903815", "gbkey": "Gene", "gene": "LOC124903815", "gene_biotype": "lncRNA"}
NC_000001.11
Gnomon
lnc_RNA
273,223
284,291
.
+
.
{"ID": "rna-XR_007065335.1", "Parent": "gene-LOC124903815", "Dbxref": ["GeneID:124903815", "GenBank:XR_007065335.1"], "Name": "XR_007065335.1", "experiment": "COORDINATES: polyA evidence [ECO:0006239]", "gbkey": "ncRNA", "gene": "LOC124903815", "model_evidence": "Supporting evidence includes similarity to: 2 ESTs%2C 36...
NC_000001.11
Gnomon
exon
273,223
273,394
.
+
.
{"ID": "exon-XR_007065335.1-1", "Parent": "rna-XR_007065335.1", "Dbxref": ["GeneID:124903815", "GenBank:XR_007065335.1"], "experiment": "COORDINATES: polyA evidence [ECO:0006239]", "gbkey": "ncRNA", "gene": "LOC124903815", "product": "uncharacterized LOC124903815%2C transcript variant X1", "transcript_id": "XR_00706533...
NC_000001.11
Gnomon
exon
281,200
284,291
.
+
.
{"ID": "exon-XR_007065335.1-2", "Parent": "rna-XR_007065335.1", "Dbxref": ["GeneID:124903815", "GenBank:XR_007065335.1"], "experiment": "COORDINATES: polyA evidence [ECO:0006239]", "gbkey": "ncRNA", "gene": "LOC124903815", "product": "uncharacterized LOC124903815%2C transcript variant X1", "transcript_id": "XR_00706533...
NC_000001.11
Gnomon
lnc_RNA
273,223
284,291
.
+
.
{"ID": "rna-XR_007065336.1", "Parent": "gene-LOC124903815", "Dbxref": ["GeneID:124903815", "GenBank:XR_007065336.1"], "Name": "XR_007065336.1", "experiment": "COORDINATES: polyA evidence [ECO:0006239]", "gbkey": "ncRNA", "gene": "LOC124903815", "model_evidence": "Supporting evidence includes similarity to: 100%25 cover...
NC_000001.11
Gnomon
exon
273,223
273,394
.
+
.
{"ID": "exon-XR_007065336.1-1", "Parent": "rna-XR_007065336.1", "Dbxref": ["GeneID:124903815", "GenBank:XR_007065336.1"], "experiment": "COORDINATES: polyA evidence [ECO:0006239]", "gbkey": "ncRNA", "gene": "LOC124903815", "product": "uncharacterized LOC124903815%2C transcript variant X2", "transcript_id": "XR_00706533...
NC_000001.11
Gnomon
exon
283,200
284,291
.
+
.
{"ID": "exon-XR_007065336.1-2", "Parent": "rna-XR_007065336.1", "Dbxref": ["GeneID:124903815", "GenBank:XR_007065336.1"], "experiment": "COORDINATES: polyA evidence [ECO:0006239]", "gbkey": "ncRNA", "gene": "LOC124903815", "product": "uncharacterized LOC124903815%2C transcript variant X2", "transcript_id": "XR_00706533...
NC_000001.11
Curated Genomic
pseudogene
347,969
348,441
.
-
.
{"ID": "gene-RPL23AP24", "Dbxref": ["GeneID:728517", "HGNC:HGNC:36176"], "Name": "RPL23AP24", "description": "ribosomal protein L23a pseudogene 24", "gbkey": "Gene", "gene": "RPL23AP24", "gene_biotype": "pseudogene", "gene_synonym": "RPL23A_1_2", "pseudo": "true"}
NC_000001.11
Curated Genomic
exon
347,969
348,441
.
-
.
{"ID": "id-RPL23AP24", "Parent": "gene-RPL23AP24", "Dbxref": ["GeneID:728517", "HGNC:HGNC:36176"], "gbkey": "exon", "gene": "RPL23AP24", "pseudo": "true"}
NC_000001.11
Gnomon
gene
350,706
358,545
.
-
.
{"ID": "gene-LOC124900618", "Dbxref": "GeneID:124900618", "Name": "LOC124900618", "description": "uncharacterized LOC124900618", "gbkey": "Gene", "gene": "LOC124900618", "gene_biotype": "lncRNA"}
NC_000001.11
Gnomon
lnc_RNA
350,706
358,545
.
-
.
{"ID": "rna-XR_002958507.2", "Parent": "gene-LOC124900618", "Dbxref": ["GeneID:124900618", "GenBank:XR_002958507.2"], "Name": "XR_002958507.2", "experiment": "COORDINATES: polyA evidence [ECO:0006239]", "gbkey": "ncRNA", "gene": "LOC124900618", "model_evidence": "Supporting evidence includes similarity to: 1 long SRA r...
NC_000001.11
Gnomon
exon
358,284
358,545
.
-
.
{"ID": "exon-XR_002958507.2-1", "Parent": "rna-XR_002958507.2", "Dbxref": ["GeneID:124900618", "GenBank:XR_002958507.2"], "experiment": "COORDINATES: polyA evidence [ECO:0006239]", "gbkey": "ncRNA", "gene": "LOC124900618", "product": "uncharacterized LOC124900618", "transcript_id": "XR_002958507.2"}
NC_000001.11
Gnomon
exon
358,049
358,183
.
-
.
{"ID": "exon-XR_002958507.2-2", "Parent": "rna-XR_002958507.2", "Dbxref": ["GeneID:124900618", "GenBank:XR_002958507.2"], "experiment": "COORDINATES: polyA evidence [ECO:0006239]", "gbkey": "ncRNA", "gene": "LOC124900618", "product": "uncharacterized LOC124900618", "transcript_id": "XR_002958507.2"}
NC_000001.11
Gnomon
exon
356,685
357,586
.
-
.
{"ID": "exon-XR_002958507.2-3", "Parent": "rna-XR_002958507.2", "Dbxref": ["GeneID:124900618", "GenBank:XR_002958507.2"], "experiment": "COORDINATES: polyA evidence [ECO:0006239]", "gbkey": "ncRNA", "gene": "LOC124900618", "product": "uncharacterized LOC124900618", "transcript_id": "XR_002958507.2"}
NC_000001.11
Gnomon
exon
350,706
351,039
.
-
.
{"ID": "exon-XR_002958507.2-4", "Parent": "rna-XR_002958507.2", "Dbxref": ["GeneID:124900618", "GenBank:XR_002958507.2"], "experiment": "COORDINATES: polyA evidence [ECO:0006239]", "gbkey": "ncRNA", "gene": "LOC124900618", "product": "uncharacterized LOC124900618", "transcript_id": "XR_002958507.2"}
NC_000001.11
Gnomon
gene
365,134
382,235
.
-
.
{"ID": "gene-LOC112268260", "Dbxref": "GeneID:112268260", "Name": "LOC112268260", "description": "uncharacterized LOC112268260", "gbkey": "Gene", "gene": "LOC112268260", "gene_biotype": "protein_coding"}
NC_000001.11
Gnomon
mRNA
365,134
382,235
.
-
.
{"ID": "rna-XM_047436352.1", "Parent": "gene-LOC112268260", "Dbxref": ["GeneID:112268260", "GenBank:XM_047436352.1"], "Name": "XM_047436352.1", "experiment": "COORDINATES: polyA evidence [ECO:0006239]", "gbkey": "mRNA", "gene": "LOC112268260", "model_evidence": "Supporting evidence includes similarity to: 7 long SRA re...
NC_000001.11
Gnomon
exon
382,050
382,235
.
-
.
{"ID": "exon-XM_047436352.1-1", "Parent": "rna-XM_047436352.1", "Dbxref": ["GeneID:112268260", "GenBank:XM_047436352.1"], "experiment": "COORDINATES: polyA evidence [ECO:0006239]", "gbkey": "mRNA", "gene": "LOC112268260", "product": "uncharacterized LOC112268260", "transcript_id": "XM_047436352.1"}
NC_000001.11
Gnomon
exon
380,897
381,688
.
-
.
{"ID": "exon-XM_047436352.1-2", "Parent": "rna-XM_047436352.1", "Dbxref": ["GeneID:112268260", "GenBank:XM_047436352.1"], "experiment": "COORDINATES: polyA evidence [ECO:0006239]", "gbkey": "mRNA", "gene": "LOC112268260", "product": "uncharacterized LOC112268260", "transcript_id": "XM_047436352.1"}
NC_000001.11
Gnomon
exon
379,769
379,870
.
-
.
{"ID": "exon-XM_047436352.1-3", "Parent": "rna-XM_047436352.1", "Dbxref": ["GeneID:112268260", "GenBank:XM_047436352.1"], "experiment": "COORDINATES: polyA evidence [ECO:0006239]", "gbkey": "mRNA", "gene": "LOC112268260", "product": "uncharacterized LOC112268260", "transcript_id": "XM_047436352.1"}
NC_000001.11
Gnomon
exon
373,144
373,323
.
-
.
{"ID": "exon-XM_047436352.1-4", "Parent": "rna-XM_047436352.1", "Dbxref": ["GeneID:112268260", "GenBank:XM_047436352.1"], "experiment": "COORDINATES: polyA evidence [ECO:0006239]", "gbkey": "mRNA", "gene": "LOC112268260", "product": "uncharacterized LOC112268260", "transcript_id": "XM_047436352.1"}
NC_000001.11
Gnomon
exon
365,134
365,692
.
-
.
{"ID": "exon-XM_047436352.1-5", "Parent": "rna-XM_047436352.1", "Dbxref": ["GeneID:112268260", "GenBank:XM_047436352.1"], "experiment": "COORDINATES: polyA evidence [ECO:0006239]", "gbkey": "mRNA", "gene": "LOC112268260", "product": "uncharacterized LOC112268260", "transcript_id": "XM_047436352.1"}
NC_000001.11
Gnomon
CDS
382,050
382,235
.
-
0
{"ID": "cds-XP_047292308.1", "Parent": "rna-XM_047436352.1", "Dbxref": ["GeneID:112268260", "GenBank:XP_047292308.1"], "Name": "XP_047292308.1", "gbkey": "CDS", "gene": "LOC112268260", "product": "uncharacterized protein LOC112268260", "protein_id": "XP_047292308.1"}
NC_000001.11
Gnomon
CDS
380,897
381,688
.
-
0
{"ID": "cds-XP_047292308.1", "Parent": "rna-XM_047436352.1", "Dbxref": ["GeneID:112268260", "GenBank:XP_047292308.1"], "Name": "XP_047292308.1", "gbkey": "CDS", "gene": "LOC112268260", "product": "uncharacterized protein LOC112268260", "protein_id": "XP_047292308.1"}
NC_000001.11
Gnomon
CDS
379,769
379,870
.
-
0
{"ID": "cds-XP_047292308.1", "Parent": "rna-XM_047436352.1", "Dbxref": ["GeneID:112268260", "GenBank:XP_047292308.1"], "Name": "XP_047292308.1", "gbkey": "CDS", "gene": "LOC112268260", "product": "uncharacterized protein LOC112268260", "protein_id": "XP_047292308.1"}
NC_000001.11
Gnomon
CDS
373,144
373,323
.
-
0
{"ID": "cds-XP_047292308.1", "Parent": "rna-XM_047436352.1", "Dbxref": ["GeneID:112268260", "GenBank:XP_047292308.1"], "Name": "XP_047292308.1", "gbkey": "CDS", "gene": "LOC112268260", "product": "uncharacterized protein LOC112268260", "protein_id": "XP_047292308.1"}
NC_000001.11
Gnomon
CDS
365,555
365,692
.
-
0
{"ID": "cds-XP_047292308.1", "Parent": "rna-XM_047436352.1", "Dbxref": ["GeneID:112268260", "GenBank:XP_047292308.1"], "Name": "XP_047292308.1", "gbkey": "CDS", "gene": "LOC112268260", "product": "uncharacterized protein LOC112268260", "protein_id": "XP_047292308.1"}
NC_000001.11
Curated Genomic
pseudogene
439,764
440,270
.
+
.
{"ID": "gene-WBP1LP7", "Dbxref": ["GeneID:106479030", "HGNC:HGNC:43955"], "Name": "WBP1LP7", "description": "WBP1L pseudogene 7", "gbkey": "Gene", "gene": "WBP1LP7", "gene_biotype": "pseudogene", "pseudo": "true"}
NC_000001.11
Curated Genomic
exon
439,764
440,270
.
+
.
{"ID": "id-WBP1LP7", "Parent": "gene-WBP1LP7", "Dbxref": ["GeneID:106479030", "HGNC:HGNC:43955"], "gbkey": "exon", "gene": "WBP1LP7", "pseudo": "true"}
NC_000001.11
BestRefSeq
gene
450,740
451,678
.
-
.
{"ID": "gene-OR4F29", "Dbxref": ["GeneID:729759", "HGNC:HGNC:31275"], "Name": "OR4F29", "description": "olfactory receptor family 4 subfamily F member 29", "gbkey": "Gene", "gene": "OR4F29", "gene_biotype": "protein_coding", "gene_synonym": "OR7-21"}
NC_000001.11
BestRefSeq
mRNA
450,740
451,678
.
-
.
{"ID": "rna-NM_001005221.2", "Parent": "gene-OR4F29", "Dbxref": ["Ensembl:ENST00000426406.4", "GeneID:729759", "GenBank:NM_001005221.2", "HGNC:HGNC:31275"], "Name": "NM_001005221.2", "gbkey": "mRNA", "gene": "OR4F29", "product": "olfactory receptor family 4 subfamily F member 29", "tag": "MANE Select", "transcript_id":...
NC_000001.11
BestRefSeq
exon
450,740
451,678
.
-
.
{"ID": "exon-NM_001005221.2-1", "Parent": "rna-NM_001005221.2", "Dbxref": ["Ensembl:ENST00000426406.4", "GeneID:729759", "GenBank:NM_001005221.2", "HGNC:HGNC:31275"], "gbkey": "mRNA", "gene": "OR4F29", "product": "olfactory receptor family 4 subfamily F member 29", "tag": "MANE Select", "transcript_id": "NM_001005221.2...
NC_000001.11
BestRefSeq
CDS
450,740
451,678
.
-
0
{"ID": "cds-NP_001005221.2", "Parent": "rna-NM_001005221.2", "Dbxref": ["CCDS:CCDS72675.1", "Ensembl:ENSP00000409316.1", "GeneID:729759", "GenBank:NP_001005221.2", "HGNC:HGNC:31275"], "Name": "NP_001005221.2", "gbkey": "CDS", "gene": "OR4F29", "product": "olfactory receptor 4F3/4F16/4F29", "protein_id": "NP_001005221.2...
NC_000001.11
Curated Genomic
pseudogene
484,833
485,210
.
-
.
{"ID": "gene-SEPTIN14P13", "Dbxref": ["GeneID:106481733", "HGNC:HGNC:51700"], "Name": "SEPTIN14P13", "description": "septin 14 pseudogene 13", "gbkey": "Gene", "gene": "SEPTIN14P13", "gene_biotype": "pseudogene", "gene_synonym": "SEPT14P13", "pseudo": "true"}
NC_000001.11
Curated Genomic
exon
484,833
485,210
.
-
.
{"ID": "id-SEPTIN14P13", "Parent": "gene-SEPTIN14P13", "Dbxref": ["GeneID:106481733", "HGNC:HGNC:51700"], "gbkey": "exon", "gene": "SEPTIN14P13", "pseudo": "true"}
NC_000001.11
Curated Genomic
pseudogene
487,055
490,819
.
+
.
{"ID": "gene-CICP7", "Dbxref": ["GeneID:100288667", "HGNC:HGNC:37756"], "Name": "CICP7", "description": "capicua transcriptional repressor pseudogene 7", "gbkey": "Gene", "gene": "CICP7", "gene_biotype": "pseudogene", "pseudo": "true"}
NC_000001.11
BestRefSeq
gene
490,756
495,445
.
-
.
{"ID": "gene-LOC100132287", "Dbxref": "GeneID:100132287", "Name": "LOC100132287", "description": "uncharacterized LOC100132287", "gbkey": "Gene", "gene": "LOC100132287", "gene_biotype": "lncRNA"}
NC_000001.11
BestRefSeq
lnc_RNA
490,756
495,445
.
-
.
{"ID": "rna-NR_028322.1", "Parent": "gene-LOC100132287", "Dbxref": ["GeneID:100132287", "GenBank:NR_028322.1"], "Name": "NR_028322.1", "gbkey": "ncRNA", "gene": "LOC100132287", "product": "uncharacterized LOC100132287", "transcript_id": "NR_028322.1"}
NC_000001.11
BestRefSeq
exon
495,277
495,445
.
-
.
{"ID": "exon-NR_028322.1-1", "Parent": "rna-NR_028322.1", "Dbxref": ["GeneID:100132287", "GenBank:NR_028322.1"], "gbkey": "ncRNA", "gene": "LOC100132287", "product": "uncharacterized LOC100132287", "transcript_id": "NR_028322.1"}
NC_000001.11
BestRefSeq
exon
494,992
495,049
.
-
.
{"ID": "exon-NR_028322.1-2", "Parent": "rna-NR_028322.1", "Dbxref": ["GeneID:100132287", "GenBank:NR_028322.1"], "gbkey": "ncRNA", "gene": "LOC100132287", "product": "uncharacterized LOC100132287", "transcript_id": "NR_028322.1"}
NC_000001.11
BestRefSeq
exon
490,756
494,898
.
-
.
{"ID": "exon-NR_028322.1-3", "Parent": "rna-NR_028322.1", "Dbxref": ["GeneID:100132287", "GenBank:NR_028322.1"], "gbkey": "ncRNA", "gene": "LOC100132287", "product": "uncharacterized LOC100132287", "transcript_id": "NR_028322.1"}
NC_000001.11
cmsearch
gene
516,376
516,479
.
-
.
{"ID": "gene-LOC124904706", "Dbxref": "GeneID:124904706", "Name": "LOC124904706", "description": "U6 spliceosomal RNA", "gbkey": "Gene", "gene": "LOC124904706", "gene_biotype": "snRNA"}
NC_000001.11
cmsearch
snRNA
516,376
516,479
.
-
.
{"ID": "rna-XR_007067247.1", "Parent": "gene-LOC124904706", "Dbxref": ["GeneID:124904706", "RFAM:RF00026", "GenBank:XR_007067247.1"], "Name": "XR_007067247.1", "gbkey": "ncRNA", "gene": "LOC124904706", "inference": "COORDINATES: profile:INFERNAL:1.1.1", "product": "U6 spliceosomal RNA", "transcript_id": "XR_007067247.1...
NC_000001.11
cmsearch
exon
516,376
516,479
.
-
.
{"ID": "exon-XR_007067247.1-1", "Parent": "rna-XR_007067247.1", "Dbxref": ["GeneID:124904706", "RFAM:RF00026", "GenBank:XR_007067247.1"], "gbkey": "ncRNA", "gene": "LOC124904706", "inference": "COORDINATES: profile:INFERNAL:1.1.1", "product": "U6 spliceosomal RNA", "transcript_id": "XR_007067247.1"}
NC_000001.11
Gnomon
gene
586,287
611,297
.
-
.
{"ID": "gene-LOC105378947", "Dbxref": "GeneID:105378947", "Name": "LOC105378947", "description": "proline-rich extensin-like protein EPR1", "gbkey": "Gene", "gene": "LOC105378947", "gene_biotype": "protein_coding"}
NC_000001.11
Gnomon
mRNA
586,287
611,297
.
-
.
{"ID": "rna-XM_011542538.1", "Parent": "gene-LOC105378947", "Dbxref": ["GeneID:105378947", "GenBank:XM_011542538.1"], "Name": "XM_011542538.1", "experiment": "COORDINATES: polyA evidence [ECO:0006239]", "gbkey": "mRNA", "gene": "LOC105378947", "model_evidence": "Supporting evidence includes similarity to: 1 long SRA re...
NC_000001.11
Gnomon
exon
611,112
611,297
.
-
.
{"ID": "exon-XM_011542538.1-1", "Parent": "rna-XM_011542538.1", "Dbxref": ["GeneID:105378947", "GenBank:XM_011542538.1"], "experiment": "COORDINATES: polyA evidence [ECO:0006239]", "gbkey": "mRNA", "gene": "LOC105378947", "product": "proline-rich extensin-like protein EPR1", "transcript_id": "XM_011542538.1"}