| { |
| "name": "sc_muris_celltype", |
| "task": "classification", |
| "num_classes": 9, |
| "classes": [ |
| "B cell", |
| "T cell", |
| "epithelial cell of proximal tubule", |
| "fenestrated endothelial cell", |
| "kidney collecting duct epithelial cell", |
| "kidney collecting duct principal cell", |
| "kidney loop of Henle ascending limb epithelial cell", |
| "macrophage", |
| "mesangial cell" |
| ], |
| "num_samples": 1817, |
| "num_features": 16472, |
| "cat_idx": [], |
| "label": "Single-Cell", |
| "sub_labels": [ |
| "RNA-seq" |
| ], |
| "description": "Classify nine released kidney cell-type annotations from Tabula Muris Senis Smart-seq2 expression.", |
| "source": "Tabula Muris Consortium (2020), Tabula Muris Senis kidney Smart-seq2 via scUnified", |
| "source_url": "https://github.com/XPgogogo/scUnified/blob/main/Tabula_Muris_kidney_filtered.h5ad", |
| "publication_doi": "10.1038/s41586-020-2496-1", |
| "split_strategy": "fixed", |
| "split_unit": "cell", |
| "curation_protocol": "singlecell_source_annotations_cell_split_v1", |
| "source_manifest_sha256": "d44877b86813d101d473dfaae4caf699a00fbabebdc36bb540d106c685f10310", |
| "feature_representation": "source_raw_counts", |
| "feature_selection": "training_nonconstant_genes", |
| "sample_metadata_file": "sample_metadata.csv", |
| "feature_metadata_file": "feature_metadata.csv", |
| "READY": true |
| } |
|
|
