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license: cc-by-nc-nd-4.0 |
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tags: |
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- medical |
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- pathology |
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- segmentation |
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--- |
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# PathSeg Dataset |
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This repository provides the **official release of the PathSeg dataset** used in the paper: |
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**“Segment Anything in Pathology Images with Natural Language.”** |
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PathSeg is released to support research on pathology image understanding and segmentation with natural language prompts. |
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Only the subsets for which **explicit distribution permissions** were obtained from the respective data owners are included in this release. |
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For convenience, we list below the original source datasets from which PathSeg is derived. Please refer to the corresponding URLs for the original downloads and license terms. |
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| Dataset | URL | |
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| -------------- | ------------------------------------------------------------ | |
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| BCSS | https://github.com/PathologyDataScience/BCSS | |
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| CoCaHis | https://cocahis.irb.hr/ | |
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| CoNIC2022 | https://conic-challenge.grand-challenge.org/ | |
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| CRAG | https://opendatalab.com/OpenDataLab/CRAG/ | |
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| DigestPath2019 | https://digestpath2019.grand-challenge.org/ | |
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| GlaS | https://datasetninja.com/gland-segmentation | |
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| Janowczyk | https://andrewjanowczyk.com/use-case-1-nuclei-segmentation/ | |
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| MIDOG | https://midog.deepmicroscopy.org/download-dataset/ | |
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| MoNuSAC | https://monusac-2020.grand-challenge.org/Data/ | |
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| NuCLS | https://sites.google.com/view/nucls/home | |
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| PanNuke | https://www.kaggle.com/datasets/andrewmvd/cancer-inst-segmentation-and-classification | |
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| RINGS | https://data.mendeley.com/datasets/h8bdwrtnr5/1 | |
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| SegPath | https://dakomura.github.io/SegPath/ | |
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| SICAPv2 | https://www.kaggle.com/datasets/shridharspol/sicapv2 | |
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| TNBC | https://peterjacknaylor.github.io/data/ | |
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| WSSS4LUAD | https://wsss4luad.grand-challenge.org/ | |
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| CoNSeP | https://opendatalab.com/OpenDataLab/CoNSeP | |
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| CPM15 | https://drive.google.com/drive/folders/11ko-GcDsPpA9GBHuCtl_jNzWQl6qY_-I | |
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| CPM17 | https://drive.google.com/drive/folders/1sJ4nmkif6j4s2FOGj8j6i_Ye7z9w0TfA | |
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| Kumar | https://drive.google.com/drive/folders/1bI3RyshWej9c4YoRW-_q7lh7FOFDFUrJ | |
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| Lizard | https://www.kaggle.com/datasets/aadimator/lizard-dataset | |
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## Citation |
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## Contact |
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For questions, permissions, or issues related to the dataset, please contact: **zchenhi@connect.ust.hk**. |
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