pdb_id
string
chain1
string
res_name1
string
res_seq_num1
int64
ins_code1
string
chain2
string
res_name2
string
res_seq_num2
int64
ins_code2
string
min_distance
float64
symmetry_op
string
label_final
string
label_bp
string
label_bs
string
filename
string
pair_type
string
pair_id
string
pdb_key
string
base1_type
string
base2_type
string
geometry_ok_01
float64
base_plane_angle_deg
float64
c1p_c1p_distance_A
float64
stack_interplane_distance_A
float64
stack_overlap_area_A2
float64
stack_parallel_plane_angle_deg
float64
hbond_min_da_dist
float64
hbond_num_da_lt_3p5
float64
hbond_max_angle_for_da_lt_3p5
float64
hbond_num_full
float64
hbond_pattern_present_01
float64
hbond_angle_defined_01
float64
coords_found_01
int64
core_feature_found_01
int64
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AA
G
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identity
basestacks
non-bp
bs
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GG
3J9W_AA_636_AA_637_G_G
3j9w
G
G
1
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4v50
AA
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U
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identity
basestacks
non-bp
bs
4v50_AA_551_AA_552_U_U
UU
4V50_AA_551_AA_552_U_U
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U
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AA
U
1,174
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basepair
bp
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AU
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U
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1
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115.021152
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1
1
1
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1yi2
0
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302
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350
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basestacks
non-bp
bs
1yi2_0_302_0_350_A_G
AG
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1yi2
A
G
1
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A
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C
19
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non-bp
non-bs
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CC
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C
C
1
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0
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B
U
8
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A
6
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identity
non-interacting
non-bp
non-bs
4tzz_B_8_E_6_U_A
AU
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U
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1
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AA
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3j9w
BA
A
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C
291
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basestacks
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bs
3j9w_BA_281_BA_291_A_C
AC
3J9W_BA_281_BA_291_A_C
3j9w
A
C
1
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0
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1
2zjq
X
A
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bp
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AA
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A
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3j9w
BA
C
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basestacks
non-bp
bs
3j9w_BA_2549_BA_2550_C_C
CC
3J9W_BA_2549_BA_2550_C_C
3j9w
C
C
1
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0
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3j9w
AA
A
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basepair
bp
non-bs
3j9w_AA_1017_AA_1032_A_C
AC
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A
C
1
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1
1
1
1
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A
C
7
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A
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149
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identity
non-interacting
non-bp
non-bs
5t62_A_7_A_149_C_U
CU
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5t62
C
U
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2zjq
X
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1,488
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1,490
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identity
basestacks
non-bp
bs
2zjq_X_1488_X_1490_G_U
GU
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G
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1
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1
1
1
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6icz
B
C
13
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B
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identity
non-interacting
non-bp
non-bs
6icz_B_13_B_70_C_A
AC
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6icz
C
A
1
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2zjq
X
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identity
basepair
bp
non-bs
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GU
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2zjq
U
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1
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0
1
1
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1
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identity
non-interacting
non-bp
non-bs
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AA
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A
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0
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identity
basepair
bp
non-bs
1yi2_0_236_0_434_A_U
AU
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1yi2
A
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1
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3j9w
AA
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identity
basestacks
non-bp
bs
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AG
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A
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identity
basepair
bp
non-bs
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AA
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2zjq
A
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0
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identity
basepair
bp
non-bs
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CG
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C
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1
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1
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BB
A
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identity
basepair
bp
non-bs
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AA
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4v50
A
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1
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1
1
1
1
1
2zjq
X
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null
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identity
basestacks
non-bp
bs
2zjq_X_1869_X_1870_A_U
AU
2ZJQ_X_1869_X_1870_A_U
2zjq
A
U
1
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0
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2zjq
Y
A
103
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104
null
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identity
basestacks
non-bp
bs
2zjq_Y_103_Y_104_A_A
AA
2ZJQ_Y_103_Y_104_A_A
2zjq
A
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1
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1
100.773646
1
1
1
1
1
2zjq
X
C
146
null
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151
null
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identity
basepair
bp
non-bs
2zjq_X_146_X_151_C_G
CG
2ZJQ_X_146_X_151_C_G
2zjq
C
G
1
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3
1
1
1
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1yi2
0
G
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identity
basestacks
non-bp
bs
1yi2_0_809_0_810_G_G
GG
1YI2_0_809_0_810_G_G
1yi2
G
G
1
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0
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1
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A2
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null
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identity
basepair
bp
non-bs
4ujc_A2_1567_A2_1585_U_U
UU
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4ujc
U
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1
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2
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2
1
1
1
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3j9w
AA
C
537
null
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identity
basestacks
non-bp
bs
3j9w_AA_537_AA_544_C_A
AC
3J9W_AA_537_AA_544_C_A
3j9w
C
A
1
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6zxf
2
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4
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1,198
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identity
non-interacting
non-bp
non-bs
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CG
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6zxf
C
G
1
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null
0
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1
1
1yi2
0
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null
0
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1,291
null
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identity
basepair
bp
non-bs
1yi2_0_1088_0_1291_A_A
AA
1YI2_0_1088_0_1291_A_A
1yi2
A
A
1
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null
0
0
0
1
1
2zjq
X
A
1,441
null
X
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1,442
null
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identity
basepair
bp
non-bs
2zjq_X_1441_X_1442_A_C
AC
2ZJQ_X_1441_X_1442_A_C
2zjq
A
C
1
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0
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0
null
0
0
0
1
1
1yi2
0
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1,771
null
0
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null
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identity
basepair
bp
non-bs
1yi2_0_1771_0_2017_U_U
UU
1YI2_0_1771_0_2017_U_U
1yi2
U
U
1
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0
3.824714
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0
null
0
0
0
1
1
2zjq
X
G
1,495
null
X
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1,496
null
3.1916
identity
basestacks
non-bp
bs
2zjq_X_1495_X_1496_G_G
GG
2ZJQ_X_1495_X_1496_G_G
2zjq
G
G
1
14.3989
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14.3989
3.348042
1
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0
0
1
1
1
1yi2
0
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1,490
null
0
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1,659
null
3.3527
identity
basepair
bp
non-bs
1yi2_0_1490_0_1659_G_A
AG
1YI2_0_1490_0_1659_G_A
1yi2
G
A
1
37.745972
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2.535353
0
37.745972
3.352669
1
118.860927
1
1
1
1
1
3j9w
AA
C
285
null
AA
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286
null
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identity
basestacks
non-bp
bs
3j9w_AA_285_AA_286_C_G
CG
3J9W_AA_285_AA_286_C_G
3j9w
C
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1
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3.125061
1
108.800137
1
1
1
1
1
4oq9
m
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186
null
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187
null
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identity
basestacks
non-bp
bs
4oq9_m_186_m_187_U_U
UU
4OQ9_M_186_M_187_U_U
4oq9
U
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1
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null
0
0
0
1
1
1yi2
0
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null
0
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2,478
null
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identity
basepair
bp
non-bs
1yi2_0_766_0_2478_A_U
AU
1YI2_0_766_0_2478_A_U
1yi2
A
U
1
19.595187
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19.595187
6.235992
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null
0
0
0
1
1
1yi2
0
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1,147
null
0
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1,217
null
3.2951
identity
basestacks
non-bp
bs
1yi2_0_1147_0_1217_C_G
CG
1YI2_0_1147_0_1217_C_G
1yi2
C
G
1
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2
84.317644
0
0
1
1
1
1yi2
0
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2,059
null
0
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2,060
null
3.3339
identity
basestacks
non-bp
bs
1yi2_0_2059_0_2060_U_A
AU
1YI2_0_2059_0_2060_U_A
1yi2
U
A
1
6.548143
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3.333887
2
94.081744
1
1
1
1
1
1yi2
0
A
410
null
0
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428
null
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identity
basestacks
non-bp
bs
1yi2_0_410_0_428_A_G
AG
1YI2_0_410_0_428_A_G
1yi2
A
G
1
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null
0
0
0
1
1
3j9w
BA
A
889
null
BA
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null
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identity
basestacks
non-bp
bs
3j9w_BA_889_BA_983_A_U
AU
3J9W_BA_889_BA_983_A_U
3j9w
A
U
1
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null
0
0
0
1
1
4lf5
A
C
1,100
null
A
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1,103
null
7.7913
identity
basepair
bp
non-bs
4lf5_A_1100_A_1103_C_C
CC
4LF5_A_1100_A_1103_C_C
4lf5
C
C
1
42.617813
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42.617813
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null
0
0
0
1
1
6ywy
A
A
14
null
A
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23
null
23.3715
identity
non-interacting
non-bp
non-bs
6ywy_A_14_A_23_A_A
AA
6YWY_A_14_A_23_A_A
6ywy
A
A
1
86.418038
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86.418038
23.371482
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null
0
0
0
1
1
2zjq
X
C
418
null
X
G
419
null
9.7164
identity
basepair
bp
non-bs
2zjq_X_418_X_419_C_G
CG
2ZJQ_X_418_X_419_C_G
2zjq
C
G
1
5.155877
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0
5.155877
14.058692
0
null
0
0
0
1
1
4oq9
P
A
163
null
Z
A
161
null
22.1741
identity
non-interacting
non-bp
non-bs
4oq9_P_163_Z_161_A_A
AA
4OQ9_P_163_Z_161_A_A
4oq9
A
A
1
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null
0
0
0
1
1
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BA
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2,444
null
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identity
basepair
bp
non-bs
3j9w_BA_2430_BA_2444_U_G
GU
3J9W_BA_2430_BA_2444_U_G
3j9w
U
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1
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3
119.19469
2
1
1
1
1
1yi2
0
C
82
null
0
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92
null
2.6663
identity
basepair
bp
non-bs
1yi2_0_82_0_92_C_G
CG
1YI2_0_82_0_92_C_G
1yi2
C
G
1
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129.920201
3
1
1
1
1
3ucu
R
A
18
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R
C
44
null
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identity
non-interacting
non-bp
non-bs
3ucu_R_18_R_44_A_C
AC
3UCU_R_18_R_44_A_C
3ucu
A
C
1
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0
0
0
1
1
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basestacks
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identity
basestacks
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bs
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basestacks
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bs
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identity
basestacks
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bs
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basestacks
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bs
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identity
basestacks
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bs
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basestacks
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bs
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basestacks
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bs
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CC
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basestacks
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bs
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bp
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G
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identity
basestacks
non-bp
bs
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AU
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basestacks
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bs
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identity
basestacks
non-bp
bs
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identity
basepair
bp
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identity
basestacks
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bs
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identity
non-interacting
non-bp
non-bs
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identity
non-interacting
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non-bs
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identity
basepair
bp
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identity
basestacks
non-bp
bs
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identity
basepair
bp
non-bs
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CC
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C
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identity
basestacks
non-bp
bs
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CC
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identity
basepair
bp
non-bs
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1
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identity
basestacks
non-bp
bs
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AC
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null
0
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1
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null
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identity
basepair
bp
non-bs
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AC
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1
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AA
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null
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identity
basestacks
non-bp
bs
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CU
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2fmt
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identity
basepair
bp
non-bs
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AC
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identity
basepair
bp
non-bs
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1
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R
G
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identity
non-interacting
non-bp
non-bs
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CG
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identity
basepair
bp
non-bs
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identity
non-interacting
non-bp
non-bs
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AC
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identity
basestacks
non-bp
bs
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CC
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identity
basepair
bp
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identity
basestacks
non-bp
bs
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CU
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1
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identity
basestacks
non-bp
bs
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AA
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basepair
bp
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AC
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C
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identity
non-interacting
non-bp
non-bs
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AA
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identity
basepair
bp
non-bs
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1
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X
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identity
basepair
bp
non-bs
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CC
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C
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0
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1yi2
0
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identity
basepair
bp
non-bs
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AC
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A
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0
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1
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X
A
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X
A
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identity
non-interacting
non-bp
non-bs
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1
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identity
basepair
bp
non-bs
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125.377358
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1
1
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3j9w
AA
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identity
basestacks
non-bp
bs
3j9w_AA_370_AA_372_G_A
AG
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G
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1
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3j9w
AA
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null
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identity
basepair
bp
non-bs
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AC
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A
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1
1
1
1
1yi2
0
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identity
basestacks
non-bp
bs
1yi2_0_2590_0_2591_U_C
CU
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U
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0
1
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1yi2
0
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1,531
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null
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identity
basestacks
non-bp
bs
1yi2_0_1531_0_1661_U_A
AU
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1
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2zjq
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X
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2,322
null
3.0677
identity
basestacks
non-bp
bs
2zjq_X_2321_X_2322_C_U
CU
2ZJQ_X_2321_X_2322_C_U
2zjq
C
U
1
45.848885
5.908038
3.459062
0.922367
45.848885
3.067715
2
95.833226
1
1
1
1
1
1yi2
0
U
63
null
0
G
84
null
2.9692
identity
basestacks
non-bp
bs
1yi2_0_63_0_84_U_G
GU
1YI2_0_63_0_84_U_G
1yi2
U
G
1
11.228102
7.35621
2.888517
0
11.228102
2.969205
2
79.038074
0
0
1
1
1
5no4
A
A
8
null
A
U
296
null
17.9497
identity
non-interacting
non-bp
non-bs
5no4_A_8_A_296_A_U
AU
5NO4_A_8_A_296_A_U
5no4
A
U
1
18.942045
18.080175
14.515995
0
18.942045
19.433665
0
null
0
0
0
1
1
1yi2
0
A
737
null
0
G
738
null
3.5054
identity
basestacks
non-bp
bs
1yi2_0_737_0_738_A_G
AG
1YI2_0_737_0_738_A_G
1yi2
A
G
1
15.947061
5.101986
3.693755
2.330701
15.947061
3.97035
0
null
0
0
0
1
1