pdb_id
string
chain1
string
res_name1
string
res_seq_num1
int64
ins_code1
string
chain2
string
res_name2
string
res_seq_num2
int64
ins_code2
string
min_distance
float64
symmetry_op
string
label_final
string
label_bp
string
label_bs
string
filename
string
pair_type
string
pair_id
string
pdb_key
string
base1_type
string
base2_type
string
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float64
base_plane_angle_deg
float64
c1p_c1p_distance_A
float64
stack_interplane_distance_A
float64
stack_overlap_area_A2
float64
stack_parallel_plane_angle_deg
float64
hbond_min_da_dist
float64
hbond_num_da_lt_3p5
float64
hbond_max_angle_for_da_lt_3p5
float64
hbond_num_full
float64
hbond_pattern_present_01
float64
hbond_angle_defined_01
float64
coords_found_01
int64
core_feature_found_01
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identity
basepair
bp
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basestacks
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bs
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identity
basepair
bp
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identity
basepair
bp
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identity
basepair
bp
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basestacks
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bs
3j9w_AA_42_AA_43_C_G
CG
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basestacks
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bs
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identity
non-interacting
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non-bs
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identity
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bp
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basestacks
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bs
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identity
basepair
bp
non-bs
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bp
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identity
basepair
bp
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identity
basestacks
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bs
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identity
basestacks
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bs
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identity
basestacks
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bs
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identity
basestacks
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bs
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basestacks
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bs
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identity
basestacks
non-bp
bs
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CU
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identity
basestacks
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bs
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identity
basestacks
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bs
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AA
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identity
non-interacting
non-bp
non-bs
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identity
basepair
bp
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identity
basepair
bp
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non-interacting
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non-bs
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identity
basestacks
non-bp
bs
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identity
non-interacting
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non-bs
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bp
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bs
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identity
non-interacting
non-bp
non-bs
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identity
basepair
bp
non-bs
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identity
basepair
bp
non-bs
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identity
basepair
bp
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identity
basepair
bp
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non-interacting
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non-bs
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identity
basestacks
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bs
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identity
basestacks
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bs
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1
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identity
basestacks
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bs
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identity
basepair
bp
non-bs
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121.295848
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1
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identity
basestacks
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bs
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A
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identity
basepair
bp
non-bs
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AU
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1
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1
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1
1
1
1
1
1yi2
0
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identity
basestacks
non-bp
bs
1yi2_0_1732_0_2046_A_G
AG
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1
1
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identity
basepair
bp
non-bs
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AA
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A
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identity
basestacks
non-bp
bs
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UU
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1
1
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identity
non-interacting
non-bp
non-bs
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CC
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null
0
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0
1
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identity
basepair
bp
non-bs
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120.940624
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1
1
1
1
1yi2
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identity
basestacks
non-bp
bs
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null
0
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identity
basepair
bp
non-bs
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1
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1
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identity
basestacks
non-bp
bs
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121.250184
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1
1
1
1
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A
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identity
non-interacting
non-bp
non-bs
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AA
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null
0
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1
1
1yi2
0
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0
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null
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identity
basestacks
non-bp
bs
1yi2_0_2624_0_2625_A_C
AC
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1
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0
1
1
1
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identity
non-interacting
non-bp
non-bs
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CG
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null
0
0
0
1
1
2zjq
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identity
basepair
bp
non-bs
2zjq_X_79_X_305_G_A
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1
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124.494404
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1
1
1
1
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identity
basestacks
non-bp
bs
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CC
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C
C
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null
0
0
0
1
1
1yi2
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0
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null
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identity
basestacks
non-bp
bs
1yi2_0_1117_0_1118_A_A
AA
1YI2_0_1117_0_1118_A_A
1yi2
A
A
1
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null
0
0
0
1
1
2zjq
X
C
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null
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null
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identity
basestacks
non-bp
bs
2zjq_X_1451_X_1572_C_C
CC
2ZJQ_X_1451_X_1572_C_C
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C
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1
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null
0
0
0
1
1
4ujc
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null
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null
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identity
basepair
bp
non-bs
4ujc_C1_939_C1_1003_U_U
UU
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U
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1
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116.637762
2
1
1
1
1
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null
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identity
non-interacting
non-bp
non-bs
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AA
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A
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1
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null
0
0
0
1
1
1yi2
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null
0
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null
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identity
basepair
bp
non-bs
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null
0
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0
1
1
1yi2
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null
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null
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identity
basestacks
non-bp
bs
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GU
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U
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0
1
1
1
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28
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identity
non-interacting
non-bp
non-bs
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GG
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G
G
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null
0
0
0
1
1
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87
null
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identity
non-interacting
non-bp
non-bs
6ff7_2_8_6_87_C_C
CC
6FF7_2_8_6_87_C_C
6ff7
C
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1
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null
0
0
0
1
1
3j9w
AA
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495
null
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A
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null
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identity
basestacks
non-bp
bs
3j9w_AA_495_AA_496_U_A
AU
3J9W_AA_495_AA_496_U_A
3j9w
U
A
1
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25.990494
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1
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0
0
1
1
1
1yi2
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null
0
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null
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identity
basestacks
non-bp
bs
1yi2_0_2377_0_2378_U_U
UU
1YI2_0_2377_0_2378_U_U
1yi2
U
U
1
17.325451
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3.38633
1
111.479681
1
1
1
1
1
2zjq
X
C
1,762
null
X
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1,777
null
4.759
identity
basepair
bp
non-bs
2zjq_X_1762_X_1777_C_A
AC
2ZJQ_X_1762_X_1777_C_A
2zjq
C
A
1
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0
78.455603
8.234859
0
null
0
0
0
1
1
2zjq
X
A
493
null
X
G
508
null
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identity
basestacks
non-bp
bs
2zjq_X_493_X_508_A_G
AG
2ZJQ_X_493_X_508_A_G
2zjq
A
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1
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null
0
0
0
1
1
1yi2
0
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null
0
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2,602
null
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identity
basepair
bp
non-bs
1yi2_0_2581_0_2602_U_G
GU
1YI2_0_2581_0_2602_U_G
1yi2
U
G
1
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14.328956
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1
105.197569
1
1
1
1
1
4v50
BB
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null
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null
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identity
basepair
bp
non-bs
4v50_BB_1360_BB_1371_G_G
GG
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4v50
G
G
1
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2
157.547914
2
1
1
1
1
4oq9
P
A
161
null
U
A
170
null
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identity
non-interacting
non-bp
non-bs
4oq9_P_161_U_170_A_A
AA
4OQ9_P_161_U_170_A_A
4oq9
A
A
1
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0
null
0
0
0
1
1
1yi2
0
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null
0
C
2,077
null
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identity
basepair
bp
non-bs
1yi2_0_2076_0_2077_U_C
CU
1YI2_0_2076_0_2077_U_C
1yi2
U
C
1
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3.610761
0
54.88656
10.13572
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null
0
0
0
1
1
1yi2
0
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2,115
null
0
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null
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identity
basestacks
non-bp
bs
1yi2_0_2115_0_2116_U_U
UU
1YI2_0_2115_0_2116_U_U
1yi2
U
U
1
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3.460246
0.618404
12.862099
3.342129
1
113.909804
1
1
1
1
1
2zjq
X
C
968
null
X
A
970
null
2.9692
identity
basestacks
non-bp
bs
2zjq_X_968_X_970_C_A
AC
2ZJQ_X_968_X_970_C_A
2zjq
C
A
1
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2.969189
1
101.284399
1
1
1
1
1
3j9w
BA
U
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null
BA
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null
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identity
basepair
bp
non-bs
3j9w_BA_2535_BA_2639_U_C
CU
3J9W_BA_2535_BA_2639_U_C
3j9w
U
C
1
36.044101
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1.453081
0
36.044101
3.350496
1
135.239816
1
1
1
1
1
6zxf
2
C
4
null
2
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22
null
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identity
non-interacting
non-bp
non-bs
6zxf_2_4_2_22_C_A
AC
6ZXF_2_4_2_22_C_A
6zxf
C
A
1
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0
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0
null
0
0
0
1
1
1yi2
0
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1,391
null
0
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1,435
null
3.1538
identity
basepair
bp
non-bs
1yi2_0_1391_0_1435_G_U
GU
1YI2_0_1391_0_1435_G_U
1yi2
G
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1
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1.334789
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3.352971
1
107.42264
1
1
1
1
1
3j9w
BA
U
2,127
null
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null
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identity
basestacks
non-bp
bs
3j9w_BA_2127_BA_2128_U_U
UU
3J9W_BA_2127_BA_2128_U_U
3j9w
U
U
1
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3.478222
1.068783
15.902273
3.458178
1
122.440339
1
1
1
1
1
1yi2
0
A
191
null
0
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237
null
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identity
basepair
bp
non-bs
1yi2_0_191_0_237_A_G
AG
1YI2_0_191_0_237_A_G
1yi2
A
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1
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25.081216
3.981346
0
null
0
0
0
1
1
2zjq
X
G
306
null
X
C
354
null
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identity
basepair
bp
non-bs
2zjq_X_306_X_354_G_C
CG
2ZJQ_X_306_X_354_G_C
2zjq
G
C
1
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0.469315
0
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2.817633
3
122.25078
3
1
1
1
1
1zo1
F
U
7
null
F
U
50
null
6.9641
identity
non-interacting
non-bp
non-bs
1zo1_F_7_F_50_U_U
UU
1ZO1_F_7_F_50_U_U
1zo1
U
U
1
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6.054649
0
0.95507
7.132683
0
null
0
0
0
1
1
3j9w
AA
A
1,128
null
AA
U
1,129
null
3.3484
identity
basestacks
non-bp
bs
3j9w_AA_1128_AA_1129_A_U
AU
3J9W_AA_1128_AA_1129_A_U
3j9w
A
U
1
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2.636579
18.937615
3.400075
1
84.510235
0
0
1
1
1
2zjq
X
A
2,041
null
X
U
2,590
null
5.1112
identity
basestacks
non-bp
bs
2zjq_X_2041_X_2590_A_U
AU
2ZJQ_X_2041_X_2590_A_U
2zjq
A
U
1
25.400617
8.61076
5.239096
0
25.400617
5.571888
0
null
0
0
0
1
1
3j9w
BA
A
1,142
null
BA
U
1,143
null
2.8854
identity
basestacks
non-bp
bs
3j9w_BA_1142_BA_1143_A_U
AU
3J9W_BA_1142_BA_1143_A_U
3j9w
A
U
1
25.01676
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3.422515
3.350767
25.01676
3.580696
0
null
0
0
0
1
1
3j9w
AA
U
1,233
null
AA
C
1,331
null
3.1651
identity
basestacks
non-bp
bs
3j9w_AA_1233_AA_1331_U_C
CU
3J9W_AA_1233_AA_1331_U_C
3j9w
U
C
1
33.134442
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3.625634
0
33.134442
3.842642
0
null
0
0
0
1
1
6h0r
A
U
4
null
A
A
9
null
13.2176
identity
non-interacting
non-bp
non-bs
6h0r_A_4_A_9_U_A
AU
6H0R_A_4_A_9_U_A
6h0r
U
A
1
45.739951
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11.630266
0
45.739951
13.217571
0
null
0
0
0
1
1
420d
A
U
7
null
B
C
32
null
18.9654
identity
non-interacting
non-bp
non-bs
420d_A_7_B_32_U_C
CU
420D_A_7_B_32_U_C
420d
U
C
1
37.898522
23.803211
18.464431
0
37.898522
18.965394
0
null
0
0
0
1
1
3j9w
AA
U
15
null
AA
G
23
null
3.0894
identity
basestacks
non-bp
bs
3j9w_AA_15_AA_23_U_G
GU
3J9W_AA_15_AA_23_U_G
3j9w
U
G
1
18.370606
10.157078
2.794536
0
18.370606
3.277166
1
70.084848
0
0
1
1
1
5mga
B
U
-17
null
B
A
1
null
19.1167
identity
non-interacting
non-bp
non-bs
5mga_B_-17_B_1_U_A
AU
5MGA_B_-17_B_1_U_A
5mga
U
A
1
45.083287
18.498394
8.6529
0
45.083287
21.659367
0
null
0
0
0
1
1
1yi2
0
A
807
null
0
A
808
null
3.23
identity
basestacks
non-bp
bs
1yi2_0_807_0_808_A_A
AA
1YI2_0_807_0_808_A_A
1yi2
A
A
1
9.998578
5.011149
3.461298
2.765485
9.998578
3.400021
1
83.478036
0
0
1
1
1
1nlc
A
G
19
null
A
G
23
null
11.8438
identity
non-interacting
non-bp
non-bs
1nlc_A_19_A_23_G_G
GG
1NLC_A_19_A_23_G_G
1nlc
G
G
1
38.762629
18.807088
11.382479
0
38.762629
12.507971
0
null
0
0
0
1
1
4ujc
A2
A
1,377
null
A2
A
1,400
null
3.8759
identity
basepair
bp
non-bs
4ujc_A2_1377_A2_1400_A_A
AA
4UJC_A2_1377_A2_1400_A_A
4ujc
A
A
1
51.28541
9.198875
2.06097
0
51.28541
4.461104
0
null
0
0
0
1
1
1yi2
0
G
820
null
0
C
1,830
null
2.5769
identity
basepair
bp
non-bs
1yi2_0_820_0_1830_G_C
CG
1YI2_0_820_0_1830_G_C
1yi2
G
C
1
42.643989
10.002543
1.941791
0
42.643989
2.576894
4
124.753757
3
1
1
1
1
1yi2
0
C
2,806
null
0
U
2,807
null
3.0893
identity
basestacks
non-bp
bs
1yi2_0_2806_0_2807_C_U
CU
1YI2_0_2806_0_2807_C_U
1yi2
C
U
1
10.958547
5.687374
3.368559
0
10.958547
3.089309
1
88.84411
0
0
1
1
1
1yi2
0
U
1,771
null
0
A
1,886
null
3.6342
identity
basestacks
non-bp
bs
1yi2_0_1771_0_1886_U_A
AU
1YI2_0_1771_0_1886_U_A
1yi2
U
A
1
15.876492
6.449661
3.415539
0
15.876492
3.891547
0
null
0
0
0
1
1