pdb_id
string
chain1
string
res_name1
string
res_seq_num1
int64
ins_code1
string
chain2
string
res_name2
string
res_seq_num2
int64
ins_code2
string
min_distance
float64
symmetry_op
string
label_final
string
label_bp
string
label_bs
string
filename
string
pair_type
string
pair_id
string
pdb_key
string
base1_type
string
base2_type
string
geometry_ok_01
float64
base_plane_angle_deg
float64
c1p_c1p_distance_A
float64
stack_interplane_distance_A
float64
stack_overlap_area_A2
float64
stack_parallel_plane_angle_deg
float64
hbond_min_da_dist
float64
hbond_num_da_lt_3p5
float64
hbond_max_angle_for_da_lt_3p5
float64
hbond_num_full
float64
hbond_pattern_present_01
float64
hbond_angle_defined_01
float64
coords_found_01
int64
core_feature_found_01
int64
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identity
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bp
non-bs
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basestacks
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bs
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identity
basestacks
non-bp
bs
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non-interacting
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non-bs
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identity
basepair
bp
non-bs
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identity
basepair
bp
non-bs
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identity
basestacks
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bs
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identity
basepair
bp
non-bs
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identity
non-interacting
non-bp
non-bs
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identity
basepair
bp
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basepair
bp
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identity
basepair
bp
non-bs
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1
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1
1
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identity
basestacks
non-bp
bs
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null
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identity
basestacks
non-bp
bs
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CU
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null
0
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identity
basepair
bp
non-bs
2zjq_X_486_X_492_U_G
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1
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1
1
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identity
basestacks
non-bp
bs
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1yi2
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identity
basestacks
non-bp
bs
1yi2_0_78_0_100_G_C
CG
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identity
basestacks
non-bp
bs
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identity
basestacks
non-bp
bs
1yi2_0_1374_0_1725_C_C
CC
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C
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identity
non-interacting
non-bp
non-bs
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4,742
null
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identity
basepair
bp
non-bs
4ujc_A2_4740_A2_4742_U_C
CU
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null
0
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1
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2zjq
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null
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identity
basepair
bp
non-bs
2zjq_X_755_X_768_C_U
CU
2ZJQ_X_755_X_768_C_U
2zjq
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1
1
1
1
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1yi2
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identity
basepair
bp
non-bs
1yi2_0_1260_0_1261_G_A
AG
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null
0
0
0
1
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2zjq
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null
X
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null
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identity
basepair
bp
non-bs
2zjq_X_982_X_994_C_A
AC
2ZJQ_X_982_X_994_C_A
2zjq
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1
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null
0
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1yi2
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null
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null
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identity
basestacks
non-bp
bs
1yi2_0_1141_0_1142_U_C
CU
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1
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1
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1
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1
1
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B
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C
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null
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identity
basepair
bp
non-bs
3b5a_B_15_C_49_G_C
CG
3B5A_B_15_C_49_G_C
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1
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3
123.673644
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1
1
1
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2zjq
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null
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identity
basestacks
non-bp
bs
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null
0
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identity
basestacks
non-bp
bs
1yi2_0_210_0_211_U_U
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113.045894
1
1
1
1
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564
null
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identity
non-interacting
non-bp
non-bs
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CG
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1
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null
0
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1
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4lf5
A
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23
null
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identity
non-interacting
non-bp
non-bs
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AC
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4lf5
A
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1
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null
0
0
0
1
1
5no4
A
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4
null
A
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290
null
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identity
non-interacting
non-bp
non-bs
5no4_A_4_A_290_U_C
CU
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5no4
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1
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null
0
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0
1
1
1zo1
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null
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identity
non-interacting
non-bp
non-bs
1zo1_F_10_F_50_G_U
GU
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1
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84.063864
23.850284
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null
0
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0
1
1
2zjq
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801
null
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null
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identity
basepair
bp
non-bs
2zjq_X_801_X_804_A_C
AC
2ZJQ_X_801_X_804_A_C
2zjq
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null
0
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0
1
1
1yi2
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identity
basestacks
non-bp
bs
1yi2_0_752_0_753_G_U
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1
1
1
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identity
non-interacting
non-bp
non-bs
3j9w_AA_9_AA_29_G_G
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3j9w
G
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1
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null
0
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0
1
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3j9w
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null
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identity
basestacks
non-bp
bs
3j9w_BA_1780_BA_1781_C_C
CC
3J9W_BA_1780_BA_1781_C_C
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null
0
0
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1
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identity
basestacks
non-bp
bs
4v50_BB_1405_BB_1406_U_U
UU
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1
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118.951321
1
1
1
1
1
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BA
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null
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identity
basestacks
non-bp
bs
3j9w_BA_2323_BA_2324_C_C
CC
3J9W_BA_2323_BA_2324_C_C
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C
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1
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null
0
0
0
1
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3j9w
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identity
basestacks
non-bp
bs
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1
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2zjq
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null
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identity
basepair
bp
non-bs
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AC
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null
0
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0
1
1
1yi2
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576
null
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identity
basestacks
non-bp
bs
1yi2_0_576_0_577_C_G
CG
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null
0
0
0
1
1
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identity
basepair
bp
non-bs
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null
0
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1
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2zjq
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identity
basepair
bp
non-bs
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AU
2ZJQ_X_55_X_112_A_U
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2
116.463399
2
1
1
1
1
2zjq
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464
null
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465
null
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identity
basestacks
non-bp
bs
2zjq_X_464_X_465_G_C
CG
2ZJQ_X_464_X_465_G_C
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1
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110.404201
2
1
1
1
1
1yi2
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311
null
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null
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identity
basestacks
non-bp
bs
1yi2_0_311_0_321_C_A
AC
1YI2_0_311_0_321_C_A
1yi2
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1
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null
0
0
0
1
1
3j9w
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null
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identity
basestacks
non-bp
bs
3j9w_AA_524_AA_546_G_G
GG
3J9W_AA_524_AA_546_G_G
3j9w
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2
108.922768
1
1
1
1
1
2zjq
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null
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identity
basestacks
non-bp
bs
2zjq_X_135_X_136_U_A
AU
2ZJQ_X_135_X_136_U_A
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1
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1
154.967475
1
1
1
1
1
4v50
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1,676
null
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identity
basepair
bp
non-bs
4v50_BB_1668_BB_1676_A_A
AA
4V50_BB_1668_BB_1676_A_A
4v50
A
A
1
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2
107.906045
1
1
1
1
1
3j9w
AA
C
398
null
AA
G
399
null
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identity
basestacks
non-bp
bs
3j9w_AA_398_AA_399_C_G
CG
3J9W_AA_398_AA_399_C_G
3j9w
C
G
1
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0
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0
null
0
0
0
1
1
2zjq
X
C
330
null
X
U
331
null
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identity
basestacks
non-bp
bs
2zjq_X_330_X_331_C_U
CU
2ZJQ_X_330_X_331_C_U
2zjq
C
U
1
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2
97.502211
1
1
1
1
1
1yi2
0
A
306
null
0
G
345
null
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identity
basepair
bp
non-bs
1yi2_0_306_0_345_A_G
AG
1YI2_0_306_0_345_A_G
1yi2
A
G
1
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0
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1
149.908465
1
1
1
1
1
1z7f
B
A
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null
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A
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null
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identity
non-interacting
non-bp
non-bs
1z7f_B_3_C_26_A_A
AA
1Z7F_B_3_C_26_A_A
1z7f
A
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1
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null
0
0
0
1
1
1yi2
0
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null
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null
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identity
basepair
bp
non-bs
1yi2_0_1443_0_1501_G_A
AG
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G
A
1
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null
0
0
0
1
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5u0a
K
G
26
null
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G
31
null
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identity
non-interacting
non-bp
non-bs
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GG
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G
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null
0
0
0
1
1
2zjq
X
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1,678
null
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null
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identity
basestacks
non-bp
bs
2zjq_X_1678_X_1679_G_U
GU
2ZJQ_X_1678_X_1679_G_U
2zjq
G
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1
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0
null
0
0
0
1
1
1yi2
0
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null
0
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null
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identity
basepair
bp
non-bs
1yi2_0_1144_0_1219_A_U
AU
1YI2_0_1144_0_1219_A_U
1yi2
A
U
1
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0
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2
113.681814
2
1
1
1
1
2zjq
X
G
1,368
null
X
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1,390
null
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identity
basepair
bp
non-bs
2zjq_X_1368_X_1390_G_G
GG
2ZJQ_X_1368_X_1390_G_G
2zjq
G
G
1
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0
17.261344
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2
99.723337
2
1
1
1
1
2zjq
X
U
177
null
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225
null
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identity
basepair
bp
non-bs
2zjq_X_177_X_225_U_G
GU
2ZJQ_X_177_X_225_U_G
2zjq
U
G
1
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0
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2
110.959721
1
1
1
1
1
3b5a
A
C
9
null
A
A
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null
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identity
basestacks
non-bp
bs
3b5a_A_9_A_10_C_A
AC
3B5A_A_9_A_10_C_A
3b5a
C
A
1
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0
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null
0
0
0
1
1
2zjq
X
C
1,411
null
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C
1,412
null
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identity
basestacks
non-bp
bs
2zjq_X_1411_X_1412_C_C
CC
2ZJQ_X_1411_X_1412_C_C
2zjq
C
C
1
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3.070026
0
10.175876
3.290011
1
72.82341
0
0
1
1
1
1yi2
0
C
291
null
0
G
292
null
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identity
basestacks
non-bp
bs
1yi2_0_291_0_292_C_G
CG
1YI2_0_291_0_292_C_G
1yi2
C
G
1
14.836704
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3.445302
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0
null
0
0
0
1
1
1yi2
0
C
1,940
null
0
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1,943
null
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identity
basepair
bp
non-bs
1yi2_0_1940_0_1943_C_C
CC
1YI2_0_1940_0_1943_C_C
1yi2
C
C
1
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0.338954
0
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1
115.755159
1
1
1
1
1
3j9w
AA
G
1,428
null
AA
U
1,491
null
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identity
basepair
bp
non-bs
3j9w_AA_1428_AA_1491_G_U
GU
3J9W_AA_1428_AA_1491_G_U
3j9w
G
U
1
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0
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3
122.079701
3
1
1
1
1
2zjq
X
A
461
null
X
G
462
null
3.1065
identity
basestacks
non-bp
bs
2zjq_X_461_X_462_A_G
AG
2ZJQ_X_461_X_462_A_G
2zjq
A
G
1
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4.938063
3.226197
2.848775
6.20204
3.368982
1
75.021791
0
0
1
1
1
2zjq
X
C
185
null
X
A
693
null
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identity
basepair
bp
non-bs
2zjq_X_185_X_693_C_A
AC
2ZJQ_X_185_X_693_C_A
2zjq
C
A
1
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5.339865
3.101916
0
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11.582531
0
null
0
0
0
1
1
3j9w
AA
C
527
null
AA
G
538
null
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identity
basestacks
non-bp
bs
3j9w_AA_527_AA_538_C_G
CG
3J9W_AA_527_AA_538_C_G
3j9w
C
G
1
15.937231
6.050655
3.640253
3.704984
15.937231
3.448157
1
121.110134
1
1
1
1
1
2zjq
X
C
1,003
null
X
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1,175
null
5.5578
identity
basestacks
non-bp
bs
2zjq_X_1003_X_1175_C_A
AC
2ZJQ_X_1003_X_1175_C_A
2zjq
C
A
1
16.943439
7.389996
6.221645
3.480303
16.943439
6.254053
0
null
0
0
0
1
1
1yi2
0
G
413
null
0
C
427
null
2.7623
identity
basepair
bp
non-bs
1yi2_0_413_0_427_G_C
CG
1YI2_0_413_0_427_G_C
1yi2
G
C
1
17.549611
10.506356
0.236147
0
17.549611
2.762281
4
122.294479
3
1
1
1
1
3j9w
BA
C
1,783
null
BA
U
2,745
null
3.0508
identity
basepair
bp
non-bs
3j9w_BA_1783_BA_2745_C_U
CU
3J9W_BA_1783_BA_2745_C_U
3j9w
C
U
1
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1.338913
0
32.752633
3.050784
1
149.398136
1
1
1
1
1
1yi2
0
G
775
null
0
A
867
null
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identity
basestacks
non-bp
bs
1yi2_0_775_0_867_G_A
AG
1YI2_0_775_0_867_G_A
1yi2
G
A
1
8.204826
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3.269589
1.329873
8.204826
3.359729
3
88.523195
0
0
1
1
1
1yi2
0
A
2,433
null
0
A
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null
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identity
basestacks
non-bp
bs
1yi2_0_2433_0_2434_A_A
AA
1YI2_0_2433_0_2434_A_A
1yi2
A
A
1
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3.450739
0.964935
5.224958
3.839926
0
null
0
0
0
1
1
1yi2
0
G
209
null
0
U
210
null
3.1231
identity
basestacks
non-bp
bs
1yi2_0_209_0_210_G_U
GU
1YI2_0_209_0_210_G_U
1yi2
G
U
1
11.61593
5.27623
3.322713
2.727823
11.61593
3.123103
2
107.836866
2
1
1
1
1
3j9w
AA
G
156
null
AA
C
163
null
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identity
basepair
bp
non-bs
3j9w_AA_156_AA_163_G_C
CG
3J9W_AA_156_AA_163_G_C
3j9w
G
C
1
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0.873611
0
24.240461
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4
129.958475
4
1
1
1
1
4csu
A
G
2
null
A
U
32
null
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identity
non-interacting
non-bp
non-bs
4csu_A_2_A_32_G_U
GU
4CSU_A_2_A_32_G_U
4csu
G
U
1
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26.951377
10.982095
0
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24.215219
0
null
0
0
0
1
1
2zjq
X
A
1,468
null
X
A
2,681
null
6.7971
identity
basepair
bp
non-bs
2zjq_X_1468_X_2681_A_A
AA
2ZJQ_X_1468_X_2681_A_A
2zjq
A
A
1
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12.563521
3.177904
0
19.478575
7.251183
0
null
0
0
0
1
1
3ov7
C
A
3
null
C
A
4
null
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identity
basestacks
non-bp
bs
3ov7_C_3_C_4_A_A
AA
3OV7_C_3_C_4_A_A
3ov7
A
A
1
7.454039
5.589206
3.174365
0.619212
7.454039
3.6701
0
null
0
0
0
1
1
3j9w
AA
U
1,096
null
AA
G
1,109
null
2.4543
identity
basepair
bp
non-bs
3j9w_AA_1096_AA_1109_U_G
GU
3J9W_AA_1096_AA_1109_U_G
3j9w
U
G
1
27.234061
11.539757
1.100856
0
27.234061
2.454319
2
116.028058
1
1
1
1
1
1yi2
0
C
72
null
0
G
105
null
2.8037
identity
basepair
bp
non-bs
1yi2_0_72_0_105_C_G
CG
1YI2_0_72_0_105_C_G
1yi2
C
G
1
18.19435
10.626599
0.886409
0
18.19435
2.803706
3
122.607239
3
1
1
1
1
2zjq
X
A
2,371
null
X
C
2,403
null
2.7836
identity
basepair
bp
non-bs
2zjq_X_2371_X_2403_A_C
AC
2ZJQ_X_2371_X_2403_A_C
2zjq
A
C
1
18.680009
11.186352
1.228934
0
18.680009
3.334238
1
84.26489
0
0
1
1
1
2zjq
X
U
2,224
null
X
G
2,225
null
9.9624
identity
basepair
bp
non-bs
2zjq_X_2224_X_2225_U_G
GU
2ZJQ_X_2224_X_2225_U_G
2zjq
U
G
1
23.268616
9.396013
2.61685
0
23.268616
12.875255
0
null
0
0
0
1
1
3j9w
AA
A
581
null
AA
A
583
null
3.3504
identity
basepair
bp
non-bs
3j9w_AA_581_AA_583_A_A
AA
3J9W_AA_581_AA_583_A_A
3j9w
A
A
1
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10.259488
2.277691
0
41.241136
3.350362
1
139.025036
1
1
1
1
1
3j9w
BA
C
842
null
BA
C
843
null
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identity
basestacks
non-bp
bs
3j9w_BA_842_BA_843_C_C
CC
3J9W_BA_842_BA_843_C_C
3j9w
C
C
1
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3.830766
0
null
0
0
0
1
1
6x7f
7
A
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null
D
C
1,399
null
13.464
identity
non-interacting
non-bp
non-bs
6x7f_7_-20_D_1399_A_C
AC
6X7F_7_-20_D_1399_A_C
6x7f
A
C
1
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16.328151
9.073713
0
79.629143
14.278235
0
null
0
0
0
1
1
3j9w
AA
G
663
null
AA
G
761
null
3.453
identity
basepair
bp
non-bs
3j9w_AA_663_AA_761_G_G
GG
3J9W_AA_663_AA_761_G_G
3j9w
G
G
1
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10.878814
0.660986
0
25.530664
3.453053
1
104.553295
1
1
1
1
1
3j9w
BA
C
1,044
null
BA
U
1,045
null
3.3497
identity
basestacks
non-bp
bs
3j9w_BA_1044_BA_1045_C_U
CU
3J9W_BA_1044_BA_1045_C_U
3j9w
C
U
1
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0.008836
20.2254
3.349705
1
109.955176
1
1
1
1
1
3j9w
AA
U
653
null
AA
G
654
null
3.2738
identity
basestacks
non-bp
bs
3j9w_AA_653_AA_654_U_G
GU
3J9W_AA_653_AA_654_U_G
3j9w
U
G
1
20.122334
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3.247649
0.000143
20.122334
3.306129
1
96.717298
1
1
1
1
1
4v50
DB
U
29
null
DB
U
511
null
2.9229
identity
basepair
bp
non-bs
4v50_DB_29_DB_511_U_U
UU
4V50_DB_29_DB_511_U_U
4v50
U
U
1
16.546671
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0.947724
0
16.546671
2.922878
2
116.41724
2
1
1
1
1
2zjq
X
A
834
null
X
U
835
null
6.9597
identity
basepair
bp
non-bs
2zjq_X_834_X_835_A_U
AU
2ZJQ_X_834_X_835_A_U
2zjq
A
U
1
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7.879115
2.485642
0
62.014538
10.442964
0
null
0
0
0
1
1
4lel
QA
A
8
null
QA
G
566
null
16.2457
identity
non-interacting
non-bp
non-bs
4lel_QA_8_QA_566_A_G
AG
4LEL_QA_8_QA_566_A_G
4lel
A
G
1
45.462125
18.070067
12.029
0
45.462125
18.503304
0
null
0
0
0
1
1
2zjq
X
U
826
null
X
C
1,210
null
5.9196
identity
basestacks
non-bp
bs
2zjq_X_826_X_1210_U_C
CU
2ZJQ_X_826_X_1210_U_C
2zjq
U
C
1
12.668292
6.49824
6.143432
4.082593
12.668292
6.277751
0
null
0
0
0
1
1
3j9w
BA
U
1,448
null
BA
C
1,449
null
3.6456
identity
basepair
bp
non-bs
3j9w_BA_1448_BA_1449_U_C
CU
3J9W_BA_1448_BA_1449_U_C
3j9w
U
C
1
39.074132
7.477773
1.414067
0
39.074132
3.645632
0
null
0
0
0
1
1
5tzs
0
U
289
null
2
A
68
null
12.9332
identity
non-interacting
non-bp
non-bs
5tzs_0_289_2_68_U_A
AU
5TZS_0_289_2_68_U_A
5tzs
U
A
1
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12.472894
0
13.409798
13.299386
0
null
0
0
0
1
1
1yi2
0
U
2,495
null
0
U
2,528
null
2.9988
identity
basepair
bp
non-bs
1yi2_0_2495_0_2528_U_U
UU
1YI2_0_2495_0_2528_U_U
1yi2
U
U
1
14.185303
5.774453
2.973876
0
14.185303
3.25466
1
69.419568
0
0
1
1
1
4v50
AA
G
449
null
AA
G
484
null
2.5916
identity
basepair
bp
non-bs
4v50_AA_449_AA_484_G_G
GG
4V50_AA_449_AA_484_G_G
4v50
G
G
1
12.45815
13.171813
0.495875
0
12.45815
2.591587
4
112.031123
2
1
1
1
1
2zjq
X
U
1,329
null
X
G
1,350
null
3.4923
identity
basestacks
non-bp
bs
2zjq_X_1329_X_1350_U_G
GU
2ZJQ_X_1329_X_1350_U_G
2zjq
U
G
1
23.130914
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3.668938
0
23.130914
3.527919
0
null
0
0
0
1
1
5tzs
0
U
289
null
2
U
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null
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identity
non-interacting
non-bp
non-bs
5tzs_0_289_2_66_U_U
UU
5TZS_0_289_2_66_U_U
5tzs
U
U
1
29.159774
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0.013411
29.159774
6.18697
0
null
0
0
0
1
1
3j9w
AA
G
11
null
AA
G
24
null
9.9735
identity
non-interacting
non-bp
non-bs
3j9w_AA_11_AA_24_G_G
GG
3J9W_AA_11_AA_24_G_G
3j9w
G
G
1
29.700649
18.009166
8.211614
0
29.700649
10.844888
0
null
0
0
0
1
1
4csu
A
C
4
null
A
C
31
null
24.4477
identity
non-interacting
non-bp
non-bs
4csu_A_4_A_31_C_C
CC
4CSU_A_4_A_31_C_C
4csu
C
C
1
16.913843
24.43095
24.832453
0
16.913843
25.059777
0
null
0
0
0
1
1
4lf5
A
U
261
null
A
U
264
null
4.9393
identity
basepair
bp
non-bs
4lf5_A_261_A_264_U_U
UU
4LF5_A_261_A_264_U_U
4lf5
U
U
1
38.548218
10.432596
2.298554
0
38.548218
7.166361
0
null
0
0
0
1
1
3j9w
BA
U
714
null
BA
A
715
null
2.8306
identity
basestacks
non-bp
bs
3j9w_BA_714_BA_715_U_A
AU
3J9W_BA_714_BA_715_U_A
3j9w
U
A
1
30.257324
5.616252
3.224537
0.5463
30.257324
2.830562
2
113.519003
1
1
1
1
1