pdb_id
string
chain1
string
res_name1
string
res_seq_num1
int64
ins_code1
string
chain2
string
res_name2
string
res_seq_num2
int64
ins_code2
string
min_distance
float64
symmetry_op
string
label_final
string
label_bp
string
label_bs
string
filename
string
pair_type
string
pair_id
string
pdb_key
string
base1_type
string
base2_type
string
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float64
base_plane_angle_deg
float64
c1p_c1p_distance_A
float64
stack_interplane_distance_A
float64
stack_overlap_area_A2
float64
stack_parallel_plane_angle_deg
float64
hbond_min_da_dist
float64
hbond_num_da_lt_3p5
float64
hbond_max_angle_for_da_lt_3p5
float64
hbond_num_full
float64
hbond_pattern_present_01
float64
hbond_angle_defined_01
float64
coords_found_01
int64
core_feature_found_01
int64
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basestacks
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bp
non-bs
3j9w_BA_2775_BA_2785_U_U
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1
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3j9w
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identity
basestacks
non-bp
bs
3j9w_AA_122_AA_123_G_U
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identity
basestacks
non-bp
bs
1yi2_0_1451_0_1452_C_G
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2zjq
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identity
basestacks
non-bp
bs
2zjq_X_77_X_78_C_C
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identity
basestacks
non-bp
bs
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identity
basestacks
non-bp
bs
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identity
non-interacting
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identity
non-interacting
non-bp
non-bs
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identity
basestacks
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bs
1yi2_0_2550_0_2551_U_C
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identity
basestacks
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bs
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identity
basestacks
non-bp
bs
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1
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1
1
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identity
basestacks
non-bp
bs
3j9w_AA_841_AA_865_G_G
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1
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1
1
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identity
basestacks
non-bp
bs
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3J9W_AA_77_AA_93_U_G
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1
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3j9w
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identity
basepair
bp
non-bs
3j9w_BA_1054_BA_1056_A_A
AA
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A
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1
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2zjq
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null
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identity
basestacks
non-bp
bs
2zjq_X_1343_X_1344_C_C
CC
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0
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identity
basestacks
non-bp
bs
1yi2_0_1186_0_1187_C_U
CU
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1
1
1
1
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1yi2
0
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identity
basepair
bp
non-bs
1yi2_0_24_0_518_G_G
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identity
basestacks
non-bp
bs
2zjq_X_415_X_416_A_U
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2zjq
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identity
non-interacting
non-bp
non-bs
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CC
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identity
basepair
bp
non-bs
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identity
basestacks
non-bp
bs
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identity
basestacks
non-bp
bs
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1yi2
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null
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identity
basestacks
non-bp
bs
1yi2_0_1942_0_1943_A_C
AC
1YI2_0_1942_0_1943_A_C
1yi2
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1
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identity
non-interacting
non-bp
non-bs
5t62_A_11_A_122_A_A
AA
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A
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identity
basestacks
non-bp
bs
1yi2_0_2830_0_2911_U_C
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X
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448
null
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identity
basestacks
non-bp
bs
2zjq_X_158_X_448_A_C
AC
2ZJQ_X_158_X_448_A_C
2zjq
A
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1
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0
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identity
basestacks
non-bp
bs
2zjq_X_1365_X_1366_U_A
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null
0
0
0
1
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3j9w
AA
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identity
basestacks
non-bp
bs
3j9w_AA_944_AA_1354_C_U
CU
3J9W_AA_944_AA_1354_C_U
3j9w
C
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null
0
0
0
1
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1yi2
0
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null
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identity
basestacks
non-bp
bs
1yi2_0_1104_0_1105_C_C
CC
1YI2_0_1104_0_1105_C_C
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1
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89.607799
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0
1
1
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identity
basepair
bp
non-bs
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UU
4LF5_A_956_A_960_U_U
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1
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2
123.649912
2
1
1
1
1
2zjq
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null
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identity
non-interacting
non-bp
non-bs
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CG
2ZJQ_X_2_X_2771_G_C
2zjq
G
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1
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null
0
0
0
1
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3b5a
A
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C
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null
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identity
non-interacting
non-bp
non-bs
3b5a_A_6_C_43_G_A
AG
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3b5a
G
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1
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null
0
0
0
1
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3j9w
BA
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343
null
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377
null
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identity
basepair
bp
non-bs
3j9w_BA_343_BA_377_A_G
AG
3J9W_BA_343_BA_377_A_G
3j9w
A
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1
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1
105.849715
1
1
1
1
1
1yi2
0
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189
null
0
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190
null
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identity
basestacks
non-bp
bs
1yi2_0_189_0_190_A_G
AG
1YI2_0_189_0_190_A_G
1yi2
A
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1
17.531264
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1
93.340548
1
1
1
1
1
4oq9
P
A
164
null
d
A
170
null
13.5786
identity
non-interacting
non-bp
non-bs
4oq9_P_164_d_170_A_A
AA
4OQ9_P_164_D_170_A_A
4oq9
A
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1
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null
0
0
0
1
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6ymj
A
A
14
null
J
A
51
null
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identity
non-interacting
non-bp
non-bs
6ymj_A_14_J_51_A_A
AA
6YMJ_A_14_J_51_A_A
6ymj
A
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1
55.013959
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55.013959
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null
0
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1
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A
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6
null
A
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13
null
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identity
non-interacting
non-bp
non-bs
3b5a_A_6_A_13_G_G
GG
3B5A_A_6_A_13_G_G
3b5a
G
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1
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0
null
0
0
0
1
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3j9w
BA
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885
null
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null
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identity
basestacks
non-bp
bs
3j9w_BA_885_BA_886_C_U
CU
3J9W_BA_885_BA_886_C_U
3j9w
C
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1
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90.956272
1
1
1
1
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identity
non-interacting
non-bp
non-bs
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null
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1
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1yi2
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identity
basestacks
non-bp
bs
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null
0
0
0
1
1
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null
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identity
non-interacting
non-bp
non-bs
6ozp_C_12_C_18_U_U
UU
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null
0
0
0
1
1
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null
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null
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identity
basestacks
non-bp
bs
3j9w_AY_18_AY_19_A_C
AC
3J9W_AY_18_AY_19_A_C
3j9w
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1
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1
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0
0
1
1
1
1yi2
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null
0
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350
null
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identity
basestacks
non-bp
bs
1yi2_0_349_0_350_U_G
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1YI2_0_349_0_350_U_G
1yi2
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1
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1
93.292233
1
1
1
1
1
4v50
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G
1,091
null
2.7351
identity
basepair
bp
non-bs
4v50_BB_1071_BB_1091_G_G
GG
4V50_BB_1071_BB_1091_G_G
4v50
G
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1
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0
9.389193
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2
133.969702
2
1
1
1
1
1yi2
0
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512
null
0
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513
null
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identity
basestacks
non-bp
bs
1yi2_0_512_0_513_G_A
AG
1YI2_0_512_0_513_G_A
1yi2
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1
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null
0
0
0
1
1
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A
C
187
null
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E
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identity
basepair
bp
non-bs
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CU
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4lf5
C
U
1
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0
null
0
0
0
1
1
2zjq
X
U
715
null
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744
null
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identity
basestacks
non-bp
bs
2zjq_X_715_X_744_U_C
CU
2ZJQ_X_715_X_744_U_C
2zjq
U
C
1
27.832622
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0
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0
null
0
0
0
1
1
2fmt
C
G
9
null
C
U
47
null
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identity
non-interacting
non-bp
non-bs
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GU
2FMT_C_9_C_47_G_U
2fmt
G
U
1
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0
null
0
0
0
1
1
1yi2
0
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null
0
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2,307
null
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identity
basepair
bp
non-bs
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AU
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1yi2
U
A
1
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null
0
0
0
1
1
1yi2
0
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null
0
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null
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identity
basestacks
non-bp
bs
1yi2_0_750_0_751_A_U
AU
1YI2_0_750_0_751_A_U
1yi2
A
U
1
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2
102.375789
1
1
1
1
1
3j9w
BA
U
711
null
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C
712
null
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identity
basestacks
non-bp
bs
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CU
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3j9w
U
C
1
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0
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1
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13
A
8
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18
null
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identity
non-interacting
non-bp
non-bs
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AC
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5ibb
A
C
1
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0
0
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1
1
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1
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10
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1
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125
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identity
non-interacting
non-bp
non-bs
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CC
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6gqb
C
C
1
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0
null
0
0
0
1
1
4ujc
A2
G
2,682
null
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2,688
null
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identity
basepair
bp
non-bs
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GG
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4ujc
G
G
1
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2
100.276289
1
1
1
1
1
1nlc
A
G
10
null
A
C
13
null
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identity
non-interacting
non-bp
non-bs
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CG
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1nlc
G
C
1
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0
null
0
0
0
1
1
3b5a
C
U
31
null
C
C
32
null
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identity
basestacks
non-bp
bs
3b5a_C_31_C_32_U_C
CU
3B5A_C_31_C_32_U_C
3b5a
U
C
1
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0
null
0
0
0
1
1
2zjq
X
C
2,499
null
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U
2,525
null
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identity
basestacks
non-bp
bs
2zjq_X_2499_X_2525_C_U
CU
2ZJQ_X_2499_X_2525_C_U
2zjq
C
U
1
26.749388
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3.297711
0
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0
null
0
0
0
1
1
1yi2
0
G
2,442
null
0
G
2,449
null
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identity
basepair
bp
non-bs
1yi2_0_2442_0_2449_G_G
GG
1YI2_0_2442_0_2449_G_G
1yi2
G
G
1
3.745547
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0
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null
0
0
0
1
1
4v7s
AA
A
3
null
AA
C
624
null
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identity
non-interacting
non-bp
non-bs
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AC
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A
C
1
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null
0
0
0
1
1
3j9w
BA
U
1,881
null
BA
A
1,918
null
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identity
basestacks
non-bp
bs
3j9w_BA_1881_BA_1918_U_A
AU
3J9W_BA_1881_BA_1918_U_A
3j9w
U
A
1
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0
43.039577
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0
null
0
0
0
1
1
4oq9
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U
185
null
h
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186
null
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identity
basestacks
non-bp
bs
4oq9_h_185_h_186_U_U
UU
4OQ9_H_185_H_186_U_U
4oq9
U
U
1
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3.432711
0
14.496447
3.656151
0
null
0
0
0
1
1
4oq9
i
U
188
null
i
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189
null
3.7407
identity
basestacks
non-bp
bs
4oq9_i_188_i_189_U_U
UU
4OQ9_I_188_I_189_U_U
4oq9
U
U
1
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0
null
0
0
0
1
1
6t2c
V
A
17
null
V
U
25
null
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identity
non-interacting
non-bp
non-bs
6t2c_V_17_V_25_A_U
AU
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6t2c
A
U
1
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18.189688
0
48.993856
18.790832
0
null
0
0
0
1
1
6wua
a
C
952
null
a
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1,080
null
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identity
non-interacting
non-bp
non-bs
6wua_a_952_a_1080_C_G
CG
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6wua
C
G
1
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0
70.153363
22.572252
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null
0
0
0
1
1
3j9w
BA
C
2,229
null
BA
C
2,255
null
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identity
basepair
bp
non-bs
3j9w_BA_2229_BA_2255_C_C
CC
3J9W_BA_2229_BA_2255_C_C
3j9w
C
C
1
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1
142.218845
1
1
1
1
1
6qzp
L5
A
5
null
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C
14
null
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identity
non-interacting
non-bp
non-bs
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AC
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A
C
1
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null
0
0
0
1
1
1yi2
0
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1,639
null
0
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null
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identity
basestacks
non-bp
bs
1yi2_0_1639_0_1640_U_C
CU
1YI2_0_1639_0_1640_U_C
1yi2
U
C
1
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1
124.978549
1
1
1
1
1
1yi2
0
A
2,089
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0
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null
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identity
basestacks
non-bp
bs
1yi2_0_2089_0_2840_A_A
AA
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A
A
1
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null
0
0
0
1
1
5ibb
13
G
6
null
13
U
294
null
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identity
non-interacting
non-bp
non-bs
5ibb_13_6_13_294_G_U
GU
5IBB_13_6_13_294_G_U
5ibb
G
U
1
47.068616
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0
47.068616
22.894779
0
null
0
0
0
1
1
1yi2
0
A
776
null
0
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null
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identity
basestacks
non-bp
bs
1yi2_0_776_0_867_A_A
AA
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1yi2
A
A
1
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0
null
0
0
0
1
1
4lel
QA
G
9
null
QA
U
17
null
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identity
non-interacting
non-bp
non-bs
4lel_QA_9_QA_17_G_U
GU
4LEL_QA_9_QA_17_G_U
4lel
G
U
1
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22.126561
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22.860287
0
null
0
0
0
1
1
2zjq
X
U
1,490
null
X
C
1,535
null
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identity
basepair
bp
non-bs
2zjq_X_1490_X_1535_U_C
CU
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2zjq
U
C
1
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3.68007
0
null
0
0
0
1
1
4csu
A
C
11
null
A
C
27
null
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identity
non-interacting
non-bp
non-bs
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CC
4CSU_A_11_A_27_C_C
4csu
C
C
1
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18.976204
0
null
0
0
0
1
1
2zjq
X
A
718
null
X
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739
null
3.7515
identity
basepair
bp
non-bs
2zjq_X_718_X_739_A_G
AG
2ZJQ_X_718_X_739_A_G
2zjq
A
G
1
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8.341198
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0
24.420702
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0
null
0
0
0
1
1
1yi2
0
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1,206
null
0
A
1,207
null
3.7099
identity
basestacks
non-bp
bs
1yi2_0_1206_0_1207_U_A
AU
1YI2_0_1206_0_1207_U_A
1yi2
U
A
1
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3.748264
0.087738
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3.929108
0
null
0
0
0
1
1
2zjq
X
A
48
null
X
A
143
null
3.5574
identity
basepair
bp
non-bs
2zjq_X_48_X_143_A_A
AA
2ZJQ_X_48_X_143_A_A
2zjq
A
A
1
21.903017
11.23013
1.357196
0
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3.763126
0
null
0
0
0
1
1
3j9w
BA
A
549
null
BA
A
551
null
3.2976
identity
basestacks
non-bp
bs
3j9w_BA_549_BA_551_A_A
AA
3J9W_BA_549_BA_551_A_A
3j9w
A
A
1
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3.501657
2.6228
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3.300789
1
87.300882
0
0
1
1
1
2zjq
Y
U
106
null
Y
C
107
null
4.3518
identity
basestacks
non-bp
bs
2zjq_Y_106_Y_107_U_C
CU
2ZJQ_Y_106_Y_107_U_C
2zjq
U
C
1
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5.882896
4.331961
0.258534
8.700259
4.351829
0
null
0
0
0
1
1
3j9w
AA
C
250
null
AA
G
292
null
2.8527
identity
basepair
bp
non-bs
3j9w_AA_250_AA_292_C_G
CG
3J9W_AA_250_AA_292_C_G
3j9w
C
G
1
3.28867
10.718305
0.163173
0
3.28867
2.85265
3
122.717462
3
1
1
1
1
4v50
BB
U
1,782
null
BB
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2,609
null
3.3252
identity
basestacks
non-bp
bs
4v50_BB_1782_BB_2609_U_U
UU
4V50_BB_1782_BB_2609_U_U
4v50
U
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1
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4.305906
3.311043
0
12.17306
5.665777
0
null
0
0
0
1
1
3j9w
BA
A
219
null
BA
A
479
null
3.2278
identity
basestacks
non-bp
bs
3j9w_BA_219_BA_479_A_A
AA
3J9W_BA_219_BA_479_A_A
3j9w
A
A
1
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3.490229
1.50617
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3.583568
0
null
0
0
0
1
1
3j9w
AA
A
1,179
null
AA
A
1,180
null
3.4189
identity
basestacks
non-bp
bs
3j9w_AA_1179_AA_1180_A_A
AA
3J9W_AA_1179_AA_1180_A_A
3j9w
A
A
1
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3.533939
0
null
0
0
0
1
1
3j9w
AA
U
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null
AA
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1,232
null
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identity
basepair
bp
non-bs
3j9w_AA_991_AA_1232_U_C
CU
3J9W_AA_991_AA_1232_U_C
3j9w
U
C
1
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0
85.013612
3.31476
1
108.500659
1
1
1
1
1
4lf5
A
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1,351
null
A
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1,372
null
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identity
basestacks
non-bp
bs
4lf5_A_1351_A_1372_U_U
UU
4LF5_A_1351_A_1372_U_U
4lf5
U
U
1
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0
null
0
0
0
1
1
2zjq
Y
C
21
null
Y
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22
null
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identity
basestacks
non-bp
bs
2zjq_Y_21_Y_22_C_U
CU
2ZJQ_Y_21_Y_22_C_U
2zjq
C
U
1
16.625044
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0.720417
16.625044
3.114626
1
102.379021
1
1
1
1
1
1yi2
0
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2,495
null
0
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2,525
null
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identity
basepair
bp
non-bs
1yi2_0_2495_0_2525_U_G
GU
1YI2_0_2495_0_2525_U_G
1yi2
U
G
1
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2.931487
1
122.151017
1
1
1
1
1
5mga
B
U
-8
null
B
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-4
null
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identity
non-interacting
non-bp
non-bs
5mga_B_-8_B_-4_U_A
AU
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5mga
U
A
1
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7.636314
0
35.668392
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0
null
0
0
0
1
1
3j9w
BA
G
499
null
BA
A
504
null
3.0516
identity
basepair
bp
non-bs
3j9w_BA_499_BA_504_G_A
AG
3J9W_BA_499_BA_504_G_A
3j9w
G
A
1
36.920327
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2.56445
0
36.920327
3.051629
1
115.705181
1
1
1
1
1
1yi2
0
C
763
null
0
G
902
null
3.0942
identity
basestacks
non-bp
bs
1yi2_0_763_0_902_C_G
CG
1YI2_0_763_0_902_C_G
1yi2
C
G
1
1.809921
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0
1.809921
3.269531
3
89.849674
0
0
1
1
1
1yi2
0
G
334
null
0
U
335
null
3.1644
identity
basestacks
non-bp
bs
1yi2_0_334_0_335_G_U
GU
1YI2_0_334_0_335_G_U
1yi2
G
U
1
7.285274
5.288566
3.305636
3.002364
7.285274
3.253257
2
111.384687
1
1
1
1
1
1yi2
0
A
1,842
null
0
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2,641
null
4.1725
identity
basepair
bp
non-bs
1yi2_0_1842_0_2641_A_C
AC
1YI2_0_1842_0_2641_A_C
1yi2
A
C
1
51.412264
7.111053
2.862946
0
51.412264
5.910071
0
null
0
0
0
1
1
2zjq
X
A
986
null
X
A
1,167
null
3.9451
identity
basepair
bp
non-bs
2zjq_X_986_X_1167_A_A
AA
2ZJQ_X_986_X_1167_A_A
2zjq
A
A
1
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3.93903
0
81.371017
5.070656
0
null
0
0
0
1
1
3j9w
BA
A
339
null
BA
U
340
null
3.0474
identity
basestacks
non-bp
bs
3j9w_BA_339_BA_340_A_U
AU
3J9W_BA_339_BA_340_A_U
3j9w
A
U
1
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7.921527
3.047379
2
96.5627
1
1
1
1
1
4oq9
P
A
161
null
P
A
164
null
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identity
non-interacting
non-bp
non-bs
4oq9_P_161_P_164_A_A
AA
4OQ9_P_161_P_164_A_A
4oq9
A
A
1
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null
0
0
0
1
1
6e1s
A
C
1
null
A
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12
null
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identity
non-interacting
non-bp
non-bs
6e1s_A_1_A_12_C_U
CU
6E1S_A_1_A_12_C_U
6e1s
C
U
1
49.197838
17.215119
10.283958
0
49.197838
19.769806
0
null
0
0
0
1
1
5vaj
C
A
4
null
C
A
9
null
16.8361
identity
non-interacting
non-bp
non-bs
5vaj_C_4_C_9_A_A
AA
5VAJ_C_4_C_9_A_A
5vaj
A
A
1
7.908104
22.945142
15.919851
0
7.908104
17.414569
0
null
0
0
0
1
1
2zjq
X
U
598
null
X
A
681
null
2.7963
identity
basepair
bp
non-bs
2zjq_X_598_X_681_U_A
AU
2ZJQ_X_598_X_681_U_A
2zjq
U
A
1
4.548136
10.272916
0.435892
0
4.548136
2.796342
2
115.571269
2
1
1
1
1
2zjq
X
A
1,292
null
X
A
1,293
null
3.3874
identity
basestacks
non-bp
bs
2zjq_X_1292_X_1293_A_A
AA
2ZJQ_X_1292_X_1293_A_A
2zjq
A
A
1
15.560251
5.370355
3.455868
1.417927
15.560251
4.047206
0
null
0
0
0
1
1