pdb_id
string
chain1
string
res_name1
string
res_seq_num1
int64
ins_code1
string
chain2
string
res_name2
string
res_seq_num2
int64
ins_code2
string
min_distance
float64
symmetry_op
string
label_final
string
label_bp
string
label_bs
string
filename
string
pair_type
string
pair_id
string
pdb_key
string
base1_type
string
base2_type
string
geometry_ok_01
float64
base_plane_angle_deg
float64
c1p_c1p_distance_A
float64
stack_interplane_distance_A
float64
stack_overlap_area_A2
float64
stack_parallel_plane_angle_deg
float64
hbond_min_da_dist
float64
hbond_num_da_lt_3p5
float64
hbond_max_angle_for_da_lt_3p5
float64
hbond_num_full
float64
hbond_pattern_present_01
float64
hbond_angle_defined_01
float64
coords_found_01
int64
core_feature_found_01
int64
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identity
basestacks
non-bp
bs
1yi2_0_316_0_337_A_A
AA
1YI2_0_316_0_337_A_A
1yi2
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1
1
1
2zjq
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identity
basestacks
non-bp
bs
2zjq_X_588_X_1275_G_A
AG
2ZJQ_X_588_X_1275_G_A
2zjq
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2
92.60243
1
1
1
1
1
2zjq
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null
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identity
basepair
bp
non-bs
2zjq_X_2574_X_2576_G_G
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2ZJQ_X_2574_X_2576_G_G
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null
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1
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2zjq
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identity
basepair
bp
non-bs
2zjq_X_460_X_591_U_G
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2ZJQ_X_460_X_591_U_G
2zjq
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1
109.729099
1
1
1
1
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6icz
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identity
non-interacting
non-bp
non-bs
6icz_B_21_B_53_A_U
AU
6ICZ_B_21_B_53_A_U
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1yi2
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identity
basestacks
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bs
1yi2_0_1372_0_1373_A_G
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identity
basestacks
non-bp
bs
1yi2_0_815_0_816_U_G
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1
1
1
1
1
1yi2
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identity
basepair
bp
non-bs
1yi2_0_1274_0_1282_A_U
AU
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1
1
1
1
1yi2
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identity
basepair
bp
non-bs
1yi2_0_857_0_1831_A_U
AU
1YI2_0_857_0_1831_A_U
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2
1
1
1
1
3j9w
AA
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identity
basestacks
non-bp
bs
3j9w_AA_1250_AA_1251_G_G
GG
3J9W_AA_1250_AA_1251_G_G
3j9w
G
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1
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1
73.59729
0
0
1
1
1
2zjq
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X
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null
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identity
basestacks
non-bp
bs
2zjq_X_2_X_2876_G_C
CG
2ZJQ_X_2_X_2876_G_C
2zjq
G
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1
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null
0
0
0
1
1
2zjq
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null
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null
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identity
basestacks
non-bp
bs
2zjq_X_994_X_995_A_A
AA
2ZJQ_X_994_X_995_A_A
2zjq
A
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1
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1
67.32645
0
0
1
1
1
1yi2
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identity
basepair
bp
non-bs
1yi2_0_281_0_369_U_G
GU
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1yi2
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0
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1
3j9w
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identity
basepair
bp
non-bs
3j9w_AA_325_AA_344_U_A
AU
3J9W_AA_325_AA_344_U_A
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2
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1
1
1
1
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identity
basestacks
non-bp
bs
3j9w_AA_231_AA_232_U_A
AU
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1
1
1
1
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identity
basepair
bp
non-bs
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AC
3J9W_BA_999_BA_1010_A_C
3j9w
A
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1
1
1
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1yi2
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identity
basestacks
non-bp
bs
1yi2_0_1890_0_2013_U_G
GU
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1yi2
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1
1
1yi2
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null
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identity
basestacks
non-bp
bs
1yi2_0_2675_0_2813_A_A
AA
1YI2_0_2675_0_2813_A_A
1yi2
A
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1
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null
0
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0
1
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2zjq
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null
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null
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identity
basestacks
non-bp
bs
2zjq_X_352_X_353_G_G
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2ZJQ_X_352_X_353_G_G
2zjq
G
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1
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1
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1
1
1
1
1
1yi2
0
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null
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identity
basestacks
non-bp
bs
1yi2_0_2345_0_2346_A_C
AC
1YI2_0_2345_0_2346_A_C
1yi2
A
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1
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null
0
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1
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2zjq
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null
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null
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identity
basestacks
non-bp
bs
2zjq_X_716_X_743_U_A
AU
2ZJQ_X_716_X_743_U_A
2zjq
U
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1
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null
0
0
0
1
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3lrr
C
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null
C
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11
null
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identity
basepair
bp
non-bs
3lrr_C_10_C_11_U_A
AU
3LRR_C_10_C_11_U_A
3lrr
U
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1
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1
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0
0
1
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B
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null
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identity
non-interacting
non-bp
non-bs
5w1h_B_-22_B_-10_G_G
GG
5W1H_B_-22_B_-10_G_G
5w1h
G
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1
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null
0
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1
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1yi2
0
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0
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173
null
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identity
basestacks
non-bp
bs
1yi2_0_161_0_173_A_C
AC
1YI2_0_161_0_173_A_C
1yi2
A
C
1
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0
null
0
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1
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5w1h
B
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null
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identity
non-interacting
non-bp
non-bs
5w1h_B_-23_B_-9_A_G
AG
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null
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identity
basestacks
non-bp
bs
3j9w_BA_156_BA_157_A_U
AU
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3j9w
A
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identity
basepair
bp
non-bs
1yi2_0_1506_0_1677_U_U
UU
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1
125.709784
1
1
1
1
1
1yi2
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null
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null
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identity
basestacks
non-bp
bs
1yi2_0_661_0_662_G_U
GU
1YI2_0_661_0_662_G_U
1yi2
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1
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1
124.439634
1
1
1
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3j9w
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null
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identity
basestacks
non-bp
bs
3j9w_AA_721_AA_722_A_G
AG
3J9W_AA_721_AA_722_A_G
3j9w
A
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1
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1
103.29329
1
1
1
1
1
1yi2
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null
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identity
basestacks
non-bp
bs
1yi2_0_816_0_817_G_G
GG
1YI2_0_816_0_817_G_G
1yi2
G
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1
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28.413206
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1
122.747177
1
1
1
1
1
2zjq
X
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X
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1,262
null
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identity
basestacks
non-bp
bs
2zjq_X_1260_X_1262_A_U
AU
2ZJQ_X_1260_X_1262_A_U
2zjq
A
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1
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0
0
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1
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2zjq
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180
null
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identity
basepair
bp
non-bs
2zjq_X_170_X_180_U_C
CU
2ZJQ_X_170_X_180_U_C
2zjq
U
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1
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1
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1
1
1
1
1
2zjq
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null
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null
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identity
basepair
bp
non-bs
2zjq_X_84_X_97_G_U
GU
2ZJQ_X_84_X_97_G_U
2zjq
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1
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100.574332
1
1
1
1
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1akx
A
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30
null
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identity
non-interacting
non-bp
non-bs
1akx_A_25_A_30_U_C
CU
1AKX_A_25_A_30_U_C
1akx
U
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1
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null
0
0
0
1
1
1yi2
0
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null
0
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1,060
null
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identity
basestacks
non-bp
bs
1yi2_0_1055_0_1060_G_C
CG
1YI2_0_1055_0_1060_G_C
1yi2
G
C
1
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null
0
0
0
1
1
1yi2
0
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627
null
0
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1,081
null
4.3332
identity
basestacks
non-bp
bs
1yi2_0_627_0_1081_G_A
AG
1YI2_0_627_0_1081_G_A
1yi2
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A
1
33.532848
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0
33.532848
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null
0
0
0
1
1
2zjq
X
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1,047
null
X
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1,131
null
3.0816
identity
basestacks
non-bp
bs
2zjq_X_1047_X_1131_G_G
GG
2ZJQ_X_1047_X_1131_G_G
2zjq
G
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1
7.839724
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3.167872
1
107.4835
1
1
1
1
1
2zjq
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null
X
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1,121
null
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identity
basepair
bp
non-bs
2zjq_X_1058_X_1121_G_G
GG
2ZJQ_X_1058_X_1121_G_G
2zjq
G
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1
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1
83.84739
0
0
1
1
1
1yi2
0
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null
0
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1,433
null
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identity
basepair
bp
non-bs
1yi2_0_1392_0_1433_A_G
AG
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1yi2
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1
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null
0
0
0
1
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B
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identity
non-interacting
non-bp
non-bs
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CG
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5w1h
C
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1
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26.682431
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null
0
0
0
1
1
1yi2
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null
0
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null
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identity
basepair
bp
non-bs
1yi2_0_969_0_999_G_C
CG
1YI2_0_969_0_999_G_C
1yi2
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1
17.065023
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147.803417
2
1
1
1
1
3ssf
A
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A
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null
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identity
non-interacting
non-bp
non-bs
3ssf_A_2_A_4_A_A
AA
3SSF_A_2_A_4_A_A
3ssf
A
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1
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0
null
0
0
0
1
1
4ujc
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C
4,842
null
A2
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4,887
null
4.8685
identity
basepair
bp
non-bs
4ujc_A2_4842_A2_4887_C_U
CU
4UJC_A2_4842_A2_4887_C_U
4ujc
C
U
1
19.499118
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0
19.499118
4.868489
0
null
0
0
0
1
1
1yi2
0
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1,089
null
0
C
1,267
null
3.0118
identity
basepair
bp
non-bs
1yi2_0_1089_0_1267_G_C
CG
1YI2_0_1089_0_1267_G_C
1yi2
G
C
1
15.528476
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0
15.528476
3.011764
3
122.51512
3
1
1
1
1
3j9w
BA
A
1,072
null
BA
A
1,073
null
3.2517
identity
basestacks
non-bp
bs
3j9w_BA_1072_BA_1073_A_A
AA
3J9W_BA_1072_BA_1073_A_A
3j9w
A
A
1
49.59812
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3.370514
0
49.59812
5.463866
0
null
0
0
0
1
1
2zjq
X
G
2,083
null
X
U
2,172
null
2.5103
identity
basepair
bp
non-bs
2zjq_X_2083_X_2172_G_U
GU
2ZJQ_X_2083_X_2172_G_U
2zjq
G
U
1
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0
23.676672
2.510251
3
142.083717
2
1
1
1
1
3j9w
BA
C
1,449
null
BA
C
1,450
null
4.6371
identity
basestacks
non-bp
bs
3j9w_BA_1449_BA_1450_C_C
CC
3J9W_BA_1449_BA_1450_C_C
3j9w
C
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1
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basestacks
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bs
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identity
basestacks
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bs
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bp
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basepair
bp
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basestacks
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basestacks
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bs
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basestacks
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bs
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bp
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identity
basestacks
non-bp
bs
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basestacks
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bs
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identity
basepair
bp
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X
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identity
basepair
bp
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identity
non-interacting
non-bp
non-bs
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non-interacting
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basestacks
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bs
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basestacks
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bs
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identity
basepair
bp
non-bs
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identity
basepair
bp
non-bs
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1
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identity
basestacks
non-bp
bs
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identity
basestacks
non-bp
bs
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CC
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identity
non-interacting
non-bp
non-bs
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CG
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0
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0
1
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identity
basepair
bp
non-bs
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CG
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1
1
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BA
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identity
basepair
bp
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1
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identity
non-interacting
non-bp
non-bs
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identity
basestacks
non-bp
bs
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AA
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identity
basepair
bp
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null
0
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0
1
1
1yi2
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identity
basestacks
non-bp
bs
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CG
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1
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1
1
1
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identity
basestacks
non-bp
bs
1yi2_0_543_0_544_G_G
GG
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1
1
1
1
1yi2
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identity
basepair
bp
non-bs
1yi2_0_1489_0_1656_G_A
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1
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1
133.319766
1
1
1
1
1
2zjq
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null
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null
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identity
basestacks
non-bp
bs
2zjq_X_349_X_350_G_U
GU
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G
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1
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0
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1
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identity
basestacks
non-bp
bs
1yi2_0_1293_0_1294_U_A
AU
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U
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1
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null
0
0
0
1
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1yi2
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null
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identity
basestacks
non-bp
bs
1yi2_0_229_0_230_G_C
CG
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1
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106.493968
1
1
1
1
1
2zjq
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null
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identity
basestacks
non-bp
bs
2zjq_X_101_X_102_A_C
AC
2ZJQ_X_101_X_102_A_C
2zjq
A
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1
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3
91.09476
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1
1
1
1
3j9w
AA
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null
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identity
basestacks
non-bp
bs
3j9w_AA_886_AA_887_A_C
AC
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3j9w
A
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1
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null
0
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0
1
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3j9w
AA
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identity
basestacks
non-bp
bs
3j9w_AA_966_AA_967_U_U
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0
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0
1
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6oxa
QA
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QA
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564
null
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identity
non-interacting
non-bp
non-bs
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CG
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6oxa
G
C
1
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0
0
0
1
1
5mga
B
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identity
non-interacting
non-bp
non-bs
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GU
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5mga
U
G
1
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0
0
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1
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0
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null
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identity
basestacks
non-bp
bs
1yi2_0_1096_0_1097_U_A
AU
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U
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1
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1
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1
1
1
1
1
1yi2
0
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0
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null
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identity
basestacks
non-bp
bs
1yi2_0_116_0_117_G_A
AG
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1
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1
1
1
1
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identity
non-interacting
non-bp
non-bs
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UU
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U
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0
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0
1
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6t2c
V
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null
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identity
non-interacting
non-bp
non-bs
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AG
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A
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null
0
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1
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3j9w
AA
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identity
non-interacting
non-bp
non-bs
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AU
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null
0
0
0
1
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1yi2
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identity
basepair
bp
non-bs
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AG
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1yi2
A
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null
0
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0
1
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2zjq
X
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null
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identity
basestacks
non-bp
bs
2zjq_X_307_X_308_C_C
CC
2ZJQ_X_307_X_308_C_C
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null
0
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0
1
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4tzy
X
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X
A
45
null
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identity
non-interacting
non-bp
non-bs
4tzy_X_22_X_45_U_A
AU
4TZY_X_22_X_45_U_A
4tzy
U
A
1
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0
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0
1
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3j9w
AA
A
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identity
basestacks
non-bp
bs
3j9w_AA_844_AA_862_A_A
AA
3J9W_AA_844_AA_862_A_A
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0
0
0
1
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5ibb
13
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13
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11
null
13.716
identity
non-interacting
non-bp
non-bs
5ibb_13_8_13_11_A_G
AG
5IBB_13_8_13_11_A_G
5ibb
A
G
1
75.561992
16.289667
10.204924
0
75.561992
16.703788
0
null
0
0
0
1
1
3j9w
BA
A
652
null
BA
A
667
null
2.9921
identity
basestacks
non-bp
bs
3j9w_BA_652_BA_667_A_A
AA
3J9W_BA_652_BA_667_A_A
3j9w
A
A
1
6.697655
8.194906
3.365564
1.039486
6.697655
3.623712
0
null
0
0
0
1
1
4ujc
C1
A
455
null
C1
A
1,735
null
4.3613
identity
basepair
bp
non-bs
4ujc_C1_455_C1_1735_A_A
AA
4UJC_C1_455_C1_1735_A_A
4ujc
A
A
1
28.84788
5.637619
0.59507
0
28.84788
7.381558
0
null
0
0
0
1
1
4oq9
i
U
189
null
i
U
190
null
3.4591
identity
basestacks
non-bp
bs
4oq9_i_189_i_190_U_U
UU
4OQ9_I_189_I_190_U_U
4oq9
U
U
1
43.208684
5.500355
4.07113
3.286524
43.208684
3.459069
1
91.04726
1
1
1
1
1