pdb_id
string
chain1
string
res_name1
string
res_seq_num1
int64
ins_code1
string
chain2
string
res_name2
string
res_seq_num2
int64
ins_code2
string
min_distance
float64
symmetry_op
string
label_final
string
label_bp
string
label_bs
string
filename
string
pair_type
string
pair_id
string
pdb_key
string
base1_type
string
base2_type
string
geometry_ok_01
float64
base_plane_angle_deg
float64
c1p_c1p_distance_A
float64
stack_interplane_distance_A
float64
stack_overlap_area_A2
float64
stack_parallel_plane_angle_deg
float64
hbond_min_da_dist
float64
hbond_num_da_lt_3p5
float64
hbond_max_angle_for_da_lt_3p5
float64
hbond_num_full
float64
hbond_pattern_present_01
float64
hbond_angle_defined_01
float64
coords_found_01
int64
core_feature_found_01
int64
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identity
basepair
bp
non-bs
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1
1
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1yi2
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null
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null
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identity
basestacks
non-bp
bs
1yi2_0_431_0_432_G_G
GG
1YI2_0_431_0_432_G_G
1yi2
G
G
1
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1
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1
1
1
1
1
2zjq
X
C
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null
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940
null
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identity
basestacks
non-bp
bs
2zjq_X_864_X_940_C_G
CG
2ZJQ_X_864_X_940_C_G
2zjq
C
G
1
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1
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3j9w
AA
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identity
basestacks
non-bp
bs
3j9w_AA_1101_AA_1105_U_U
UU
3J9W_AA_1101_AA_1105_U_U
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U
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103.329597
1
1
1
1
1
1yi2
0
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identity
basestacks
non-bp
bs
1yi2_0_1061_0_1062_C_U
CU
1YI2_0_1061_0_1062_C_U
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C
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1
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91.327161
1
1
1
1
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6ff7
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non-interacting
non-bp
non-bs
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1yi2
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identity
basestacks
non-bp
bs
1yi2_0_1053_0_1062_G_U
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G
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1
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identity
non-interacting
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non-bs
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1yi2
0
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identity
basepair
bp
non-bs
1yi2_0_1545_0_1702_C_U
CU
1YI2_0_1545_0_1702_C_U
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C
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1
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2
1
1
1
1
3j9w
AA
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143
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177
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identity
basepair
bp
non-bs
3j9w_AA_143_AA_177_C_G
CG
3J9W_AA_143_AA_177_C_G
3j9w
C
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1
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127.847737
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1
1
1
1
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A2
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281
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identity
basepair
bp
non-bs
4ujc_A2_281_A2_288_U_U
UU
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4ujc
U
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1
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115.886952
2
1
1
1
1
2zjq
X
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null
X
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null
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identity
basestacks
non-bp
bs
2zjq_X_855_X_948_G_C
CG
2ZJQ_X_855_X_948_G_C
2zjq
G
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1
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1
1
1
1
1
3j9w
AA
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489
null
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identity
basestacks
non-bp
bs
3j9w_AA_462_AA_489_A_U
AU
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3j9w
A
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1
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null
0
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0
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1yi2
0
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null
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585
null
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identity
basestacks
non-bp
bs
1yi2_0_584_0_585_U_C
CU
1YI2_0_584_0_585_U_C
1yi2
U
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1
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1
98.469746
1
1
1
1
1
1yi2
0
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376
null
0
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null
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identity
basestacks
non-bp
bs
1yi2_0_376_0_377_C_C
CC
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1yi2
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1
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identity
basestacks
non-bp
bs
4v50_BB_153_BB_154_U_U
UU
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1yi2
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identity
basestacks
non-bp
bs
1yi2_0_917_0_927_U_U
UU
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1yi2
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null
0
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0
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3j9w
AA
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identity
basepair
bp
non-bs
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UU
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2
1
1
1
1
1yi2
0
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null
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null
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identity
basepair
bp
non-bs
1yi2_0_53_0_66_C_G
CG
1YI2_0_53_0_66_C_G
1yi2
C
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1
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1
1
1
1
1yi2
0
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identity
basestacks
non-bp
bs
1yi2_0_1983_0_1984_C_U
CU
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1yi2
C
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null
0
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1
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2zjq
X
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44
null
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192
null
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identity
basepair
bp
non-bs
2zjq_X_44_X_192_G_G
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2ZJQ_X_44_X_192_G_G
2zjq
G
G
1
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null
0
0
0
1
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3j9w
AA
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345
null
AA
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346
null
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identity
basestacks
non-bp
bs
3j9w_AA_345_AA_346_G_A
AG
3J9W_AA_345_AA_346_G_A
3j9w
G
A
1
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1
101.600731
1
1
1
1
1
1yi2
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null
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71
null
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identity
basestacks
non-bp
bs
1yi2_9_70_9_71_U_C
CU
1YI2_9_70_9_71_U_C
1yi2
U
C
1
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3.039174
2
104.469944
2
1
1
1
1
2zjq
Y
C
19
null
Y
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70
null
3.6241
identity
basestacks
non-bp
bs
2zjq_Y_19_Y_70_C_C
CC
2ZJQ_Y_19_Y_70_C_C
2zjq
C
C
1
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0
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0
null
0
0
0
1
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4lf5
A
G
9
null
A
C
564
null
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identity
non-interacting
non-bp
non-bs
4lf5_A_9_A_564_G_C
CG
4LF5_A_9_A_564_G_C
4lf5
G
C
1
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25.438068
11.748496
0
44.991982
19.000561
0
null
0
0
0
1
1
4ujc
C1
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145
null
C1
G
146
null
2.6777
identity
basepair
bp
non-bs
4ujc_C1_145_C1_146_G_G
GG
4UJC_C1_145_C1_146_G_G
4ujc
G
G
1
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2.465599
0
23.260816
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2
144.238544
2
1
1
1
1
3j9w
AA
G
576
null
AA
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null
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identity
basestacks
non-bp
bs
3j9w_AA_576_AA_894_G_U
GU
3J9W_AA_576_AA_894_G_U
3j9w
G
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1
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null
0
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0
1
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6ymj
A
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18
null
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identity
non-interacting
non-bp
non-bs
6ymj_A_13_A_18_A_C
AC
6YMJ_A_13_A_18_A_C
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A
C
1
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null
0
0
0
1
1
1yi2
0
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1,570
null
0
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null
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identity
basestacks
non-bp
bs
1yi2_0_1570_0_1571_C_G
CG
1YI2_0_1570_0_1571_C_G
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1
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1
108.750328
1
1
1
1
1
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166
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258
null
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identity
basepair
bp
non-bs
4ujc_A2_166_A2_258_G_G
GG
4UJC_A2_166_A2_258_G_G
4ujc
G
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1
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3
106.859931
2
1
1
1
1
3j9w
AA
G
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633
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identity
basestacks
non-bp
bs
3j9w_AA_626_AA_633_G_C
CG
3J9W_AA_626_AA_633_G_C
3j9w
G
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1
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3
102.899674
2
1
1
1
1
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identity
non-interacting
non-bp
non-bs
6t2c_V_30_V_34_C_U
CU
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C
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1
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null
0
0
0
1
1
1yi2
0
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37
null
0
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446
null
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identity
basestacks
non-bp
bs
1yi2_0_37_0_446_A_G
AG
1YI2_0_37_0_446_A_G
1yi2
A
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1
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89.812256
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0
1
1
1
1yi2
0
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2,250
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0
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identity
basestacks
non-bp
bs
1yi2_0_2250_0_2251_G_G
GG
1YI2_0_2250_0_2251_G_G
1yi2
G
G
1
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12.135862
2.985119
2
93.434583
2
1
1
1
1
2zjq
X
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983
null
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null
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identity
basestacks
non-bp
bs
2zjq_X_983_X_984_G_A
AG
2ZJQ_X_983_X_984_G_A
2zjq
G
A
1
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0
null
0
0
0
1
1
2zjq
X
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2,591
null
X
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2,592
null
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identity
basestacks
non-bp
bs
2zjq_X_2591_X_2592_C_U
CU
2ZJQ_X_2591_X_2592_C_U
2zjq
C
U
1
18.45488
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0
18.45488
5.021176
0
null
0
0
0
1
1
1z7f
B
G
1
null
C
U
23
null
20.9692
identity
non-interacting
non-bp
non-bs
1z7f_B_1_C_23_G_U
GU
1Z7F_B_1_C_23_G_U
1z7f
G
U
1
12.570795
21.340052
20.212351
0
12.570795
21.855926
0
null
0
0
0
1
1
3j9w
BA
C
430
null
BA
C
432
null
3.3797
identity
basestacks
non-bp
bs
3j9w_BA_430_BA_432_C_C
CC
3J9W_BA_430_BA_432_C_C
3j9w
C
C
1
19.726987
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0
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1
92.113593
1
1
1
1
1
2zjq
X
U
598
null
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A
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null
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identity
basestacks
non-bp
bs
2zjq_X_598_X_599_U_A
AU
2ZJQ_X_598_X_599_U_A
2zjq
U
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1
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null
0
0
0
1
1
1nlc
A
G
9
null
B
G
23
null
20.7227
identity
non-interacting
non-bp
non-bs
1nlc_A_9_B_23_G_G
GG
1NLC_A_9_B_23_G_G
1nlc
G
G
1
64.30175
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0
64.30175
20.722717
0
null
0
0
0
1
1
3b5a
B
A
28
null
C
G
33
null
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identity
basepair
bp
non-bs
3b5a_B_28_C_33_A_G
AG
3B5A_B_28_C_33_A_G
3b5a
A
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1
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1
126.080581
1
1
1
1
1
2fmt
C
C
3
null
C
C
75
null
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identity
non-interacting
non-bp
non-bs
2fmt_C_3_C_75_C_C
CC
2FMT_C_3_C_75_C_C
2fmt
C
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1
33.093438
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null
0
0
0
1
1
1yi2
0
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395
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0
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null
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identity
basestacks
non-bp
bs
1yi2_0_395_0_397_A_A
AA
1YI2_0_395_0_397_A_A
1yi2
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1
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0
null
0
0
0
1
1
1zo1
F
A
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null
F
U
59
null
17.4145
identity
non-interacting
non-bp
non-bs
1zo1_F_5_F_59_A_U
AU
1ZO1_F_5_F_59_A_U
1zo1
A
U
1
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82.473162
18.983397
0
null
0
0
0
1
1
1yi2
0
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873
null
0
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null
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identity
basepair
bp
non-bs
1yi2_0_873_0_878_G_G
GG
1YI2_0_873_0_878_G_G
1yi2
G
G
1
6.031013
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6.031013
3.665793
0
null
0
0
0
1
1
3b5a
C
A
40
null
C
U
41
null
3.3919
identity
basestacks
non-bp
bs
3b5a_C_40_C_41_A_U
AU
3B5A_C_40_C_41_A_U
3b5a
A
U
1
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0
null
0
0
0
1
1
2zjq
X
A
1,699
null
X
U
1,748
null
3.1187
identity
basestacks
non-bp
bs
2zjq_X_1699_X_1748_A_U
AU
2ZJQ_X_1699_X_1748_A_U
2zjq
A
U
1
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0
null
0
0
0
1
1
3j9w
AA
U
1,282
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AA
A
1,283
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identity
basestacks
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identity
non-interacting
non-bp
non-bs
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non-interacting
non-bp
non-bs
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identity
basestacks
non-bp
bs
2zjq_X_1938_X_2531_U_U
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identity
basestacks
non-bp
bs
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identity
basepair
bp
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1
1
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identity
basestacks
non-bp
bs
2zjq_X_1070_X_1071_G_U
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0
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identity
basepair
bp
non-bs
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1
1
1
1
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identity
basestacks
non-bp
bs
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identity
basestacks
non-bp
bs
3j9w_AA_754_AA_755_U_G
GU
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1
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identity
basepair
bp
non-bs
4ujc_A2_488_A2_658_G_G
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identity
basepair
bp
non-bs
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identity
basepair
bp
non-bs
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identity
basepair
bp
non-bs
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1
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identity
basepair
bp
non-bs
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1
1
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identity
basestacks
non-bp
bs
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3j9w
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1
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0
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2zjq
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null
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null
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identity
basestacks
non-bp
bs
2zjq_X_1050_X_1128_G_G
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G
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1
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null
0
0
0
1
1
2zjq
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null
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null
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identity
basestacks
non-bp
bs
2zjq_X_235_X_236_C_C
CC
2ZJQ_X_235_X_236_C_C
2zjq
C
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1
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1
1
1
1
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identity
basepair
bp
non-bs
4v50_AA_299_AA_566_G_G
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1
1
1
1
4ujc
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null
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identity
basepair
bp
non-bs
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UU
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1
103.200141
1
1
1
1
1
3j9w
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null
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null
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identity
basestacks
non-bp
bs
3j9w_BA_2633_BA_2634_U_U
UU
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3j9w
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null
0
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0
1
1
3j9w
BA
A
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null
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identity
basestacks
non-bp
bs
3j9w_BA_623_BA_1302_A_A
AA
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A
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null
0
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0
1
1
4ujc
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null
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null
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identity
basepair
bp
non-bs
4ujc_C1_1200_C1_1357_A_A
AA
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4ujc
A
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null
0
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0
1
1
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A
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null
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null
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identity
basepair
bp
non-bs
4x62_A_56_A_352_U_C
CU
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1
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1
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1
1
1
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null
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identity
basestacks
non-bp
bs
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AU
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identity
basestacks
non-bp
bs
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AA
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null
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identity
basestacks
non-bp
bs
3j9w_AA_1548_AA_1549_C_C
CC
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C
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null
0
0
0
1
1
4ujc
AA
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null
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identity
non-interacting
non-bp
non-bs
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GG
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null
0
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0
1
1
1akx
A
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identity
non-interacting
non-bp
non-bs
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CU
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C
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0
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1
1
3j9w
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null
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identity
basestacks
non-bp
bs
3j9w_BA_1141_BA_1142_A_A
AA
3J9W_BA_1141_BA_1142_A_A
3j9w
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null
0
0
0
1
1
2zjq
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A
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null
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484
null
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identity
basestacks
non-bp
bs
2zjq_X_466_X_484_A_G
AG
2ZJQ_X_466_X_484_A_G
2zjq
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1
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null
0
0
0
1
1
2zjq
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null
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identity
basepair
bp
non-bs
2zjq_X_427_X_1856_C_U
CU
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null
0
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1
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2zjq
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null
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identity
basepair
bp
non-bs
2zjq_X_469_X_480_G_G
GG
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1
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1
1
1
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null
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identity
basestacks
non-bp
bs
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AA
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A
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0
0
1
1
1
3j9w
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null
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null
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identity
basestacks
non-bp
bs
3j9w_BA_64_BA_65_A_A
AA
3J9W_BA_64_BA_65_A_A
3j9w
A
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null
0
0
0
1
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6icz
B
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null
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identity
non-interacting
non-bp
non-bs
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CU
6ICZ_B_16_B_55_U_C
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null
0
0
0
1
1
3j9w
AA
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null
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identity
basestacks
non-bp
bs
3j9w_AA_76_AA_77_A_U
AU
3J9W_AA_76_AA_77_A_U
3j9w
A
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1
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null
0
0
0
1
1
2zjq
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null
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null
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identity
basestacks
non-bp
bs
2zjq_X_1619_X_1620_A_C
AC
2ZJQ_X_1619_X_1620_A_C
2zjq
A
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1
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2
76.986249
0
0
1
1
1
1yi2
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0
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null
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identity
basestacks
non-bp
bs
1yi2_0_1535_0_1536_G_C
CG
1YI2_0_1535_0_1536_G_C
1yi2
G
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1
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3
106.759699
2
1
1
1
1
2zjq
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null
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identity
basepair
bp
non-bs
2zjq_X_703_X_785_A_U
AU
2ZJQ_X_703_X_785_A_U
2zjq
A
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1
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2
115.194989
2
1
1
1
1
4oq9
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186
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null
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identity
basepair
bp
non-bs
4oq9_i_186_j_184_U_U
UU
4OQ9_I_186_J_184_U_U
4oq9
U
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null
0
0
0
1
1
3j9w
AA
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1,247
null
AA
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null
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identity
basepair
bp
non-bs
3j9w_AA_1247_AA_1310_A_U
AU
3J9W_AA_1247_AA_1310_A_U
3j9w
A
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1
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115.102886
1
1
1
1
1
2zjq
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null
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null
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identity
basestacks
non-bp
bs
2zjq_X_2085_X_2086_G_U
GU
2ZJQ_X_2085_X_2086_G_U
2zjq
G
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1
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1
91.413779
1
1
1
1
1
4oq9
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181
null
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182
null
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identity
basestacks
non-bp
bs
4oq9_n_181_n_182_U_U
UU
4OQ9_N_181_N_182_U_U
4oq9
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0
null
0
0
0
1
1
1yi2
0
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1,325
null
0
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1,333
null
3.237
identity
basestacks
non-bp
bs
1yi2_0_1325_0_1333_G_U
GU
1YI2_0_1325_0_1333_G_U
1yi2
G
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1
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10.726241
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1
73.351465
0
0
1
1
1
1yi2
0
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1,785
null
0
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1,812
null
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identity
basestacks
non-bp
bs
1yi2_0_1785_0_1812_G_G
GG
1YI2_0_1785_0_1812_G_G
1yi2
G
G
1
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1.825255
7.681395
3.186053
2
76.601387
0
0
1
1
1
2zjq
X
G
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null
X
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1,200
null
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identity
basestacks
non-bp
bs
2zjq_X_985_X_1200_G_G
GG
2ZJQ_X_985_X_1200_G_G
2zjq
G
G
1
13.500393
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0.110506
13.500393
3.323402
3
112.134744
1
1
1
1
1
2zjq
X
A
1,040
null
X
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1,041
null
2.8275
identity
basestacks
non-bp
bs
2zjq_X_1040_X_1041_A_G
AG
2ZJQ_X_1040_X_1041_A_G
2zjq
A
G
1
36.482376
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0.001805
36.482376
3.687698
0
null
0
0
0
1
1
2b2d
S
A
411
null
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A
412
null
7.5183
identity
non-interacting
non-bp
non-bs
2b2d_S_411_S_412_A_A
AA
2B2D_S_411_S_412_A_A
2b2d
A
A
1
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60.66551
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null
0
0
0
1
1
5jch
U
A
4
null
V
G
1
null
15.0494
identity
non-interacting
non-bp
non-bs
5jch_U_4_V_1_A_G
AG
5JCH_U_4_V_1_A_G
5jch
A
G
1
29.818095
17.621274
13.832062
0
29.818095
15.940644
0
null
0
0
0
1
1
3j9w
AA
G
667
null
AA
U
756
null
3.4748
identity
basepair
bp
non-bs
3j9w_AA_667_AA_756_G_U
GU
3J9W_AA_667_AA_756_G_U
3j9w
G
U
1
46.171903
13.561817
1.192151
0
46.171903
3.474819
2
100.873775
2
1
1
1
1
2zjq
X
A
1,610
null
X
U
1,611
null
2.9914
identity
basestacks
non-bp
bs
2zjq_X_1610_X_1611_A_U
AU
2ZJQ_X_1610_X_1611_A_U
2zjq
A
U
1
7.397367
5.471007
3.200271
0.045584
7.397367
3.210355
2
106.104954
1
1
1
1
1
1yi2
0
C
1,792
null
0
A
1,801
null
3.2517
identity
basestacks
non-bp
bs
1yi2_0_1792_0_1801_C_A
AC
1YI2_0_1792_0_1801_C_A
1yi2
C
A
1
7.393521
7.562665
3.097879
0
7.393521
4.065458
0
null
0
0
0
1
1