pdb_id
string
chain1
string
res_name1
string
res_seq_num1
int64
ins_code1
string
chain2
string
res_name2
string
res_seq_num2
int64
ins_code2
string
min_distance
float64
symmetry_op
string
label_final
string
label_bp
string
label_bs
string
filename
string
pair_type
string
pair_id
string
pdb_key
string
base1_type
string
base2_type
string
geometry_ok_01
float64
base_plane_angle_deg
float64
c1p_c1p_distance_A
float64
stack_interplane_distance_A
float64
stack_overlap_area_A2
float64
stack_parallel_plane_angle_deg
float64
hbond_min_da_dist
float64
hbond_num_da_lt_3p5
float64
hbond_max_angle_for_da_lt_3p5
float64
hbond_num_full
float64
hbond_pattern_present_01
float64
hbond_angle_defined_01
float64
coords_found_01
int64
core_feature_found_01
int64
4ujc
C1
G
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G
1,130
null
2.6623
identity
basepair
bp
non-bs
4ujc_C1_1102_C1_1130_G_G
GG
4UJC_C1_1102_C1_1130_G_G
4ujc
G
G
1
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null
0
0
0
1
1
1yi2
0
A
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null
0
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1,460
null
3.2729
identity
basestacks
non-bp
bs
1yi2_0_1459_0_1460_A_G
AG
1YI2_0_1459_0_1460_A_G
1yi2
A
G
1
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0
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0
null
0
0
0
1
1
3j9w
AA
A
1,328
null
AA
G
1,370
null
2.8825
identity
basepair
bp
non-bs
3j9w_AA_1328_AA_1370_A_G
AG
3J9W_AA_1328_AA_1370_A_G
3j9w
A
G
1
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0
31.774142
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2
112.67185
2
1
1
1
1
2zjq
X
A
595
null
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824
null
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identity
basestacks
non-bp
bs
2zjq_X_595_X_824_A_U
AU
2ZJQ_X_595_X_824_A_U
2zjq
A
U
1
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0
25.12351
5.433453
0
null
0
0
0
1
1
2zjq
X
A
149
null
X
A
150
null
3.3675
identity
basestacks
non-bp
bs
2zjq_X_149_X_150_A_A
AA
2ZJQ_X_149_X_150_A_A
2zjq
A
A
1
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1
78.789508
0
0
1
1
1
1yi2
0
G
1,475
null
0
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1,865
null
3.7381
identity
basepair
bp
non-bs
1yi2_0_1475_0_1865_G_A
AG
1YI2_0_1475_0_1865_G_A
1yi2
G
A
1
31.753671
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1.735683
0
31.753671
4.792762
0
null
0
0
0
1
1
2zjq
X
G
421
null
X
G
433
null
2.7264
identity
basestacks
non-bp
bs
2zjq_X_421_X_433_G_G
GG
2ZJQ_X_421_X_433_G_G
2zjq
G
G
1
20.780997
7.612956
3.129529
0.59361
20.780997
3.451049
1
113.312786
1
1
1
1
1
2zjq
X
U
2,088
null
X
C
2,089
null
3.6813
identity
basestacks
non-bp
bs
2zjq_X_2088_X_2089_U_C
CU
2ZJQ_X_2088_X_2089_U_C
2zjq
U
C
1
17.592432
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0
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0
null
0
0
0
1
1
2zjq
X
U
925
null
X
C
926
null
3.7325
identity
basepair
bp
non-bs
2zjq_X_925_X_926_U_C
CU
2ZJQ_X_925_X_926_U_C
2zjq
U
C
1
13.567986
7.083264
1.158942
0
13.567986
4.543777
0
null
0
0
0
1
1
2pn4
A
A
50
null
A
C
55
null
15.829
identity
non-interacting
non-bp
non-bs
2pn4_A_50_A_55_A_C
AC
2PN4_A_50_A_55_A_C
2pn4
A
C
1
23.682925
21.038046
15.074163
0
23.682925
15.933235
0
null
0
0
0
1
1
2zjq
X
A
1,226
null
X
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1,248
null
3.8907
identity
basestacks
non-bp
bs
2zjq_X_1226_X_1248_A_G
AG
2ZJQ_X_1226_X_1248_A_G
2zjq
A
G
1
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0
10.611222
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0
null
0
0
0
1
1
4ujc
A2
C
334
null
A3
C
32
null
2.7504
identity
basepair
bp
non-bs
4ujc_A2_334_A3_32_C_C
CC
4UJC_A2_334_A3_32_C_C
4ujc
C
C
1
30.484613
7.875652
1.337269
0
30.484613
3.233538
1
114.588577
1
1
1
1
1
1yi2
0
C
2,831
null
0
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2,832
null
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identity
basestacks
non-bp
bs
1yi2_0_2831_0_2832_C_C
CC
1YI2_0_2831_0_2832_C_C
1yi2
C
C
1
9.462778
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9.462778
3.524611
0
null
0
0
0
1
1
2zjq
X
U
816
null
X
A
817
null
3.7459
identity
basestacks
non-bp
bs
2zjq_X_816_X_817_U_A
AU
2ZJQ_X_816_X_817_U_A
2zjq
U
A
1
14.145192
6.025069
3.906418
0.106174
14.145192
3.808263
0
null
0
0
0
1
1
1yi2
0
U
2,541
null
0
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2,645
null
4.3092
identity
basepair
bp
non-bs
1yi2_0_2541_0_2645_U_U
UU
1YI2_0_2541_0_2645_U_U
1yi2
U
U
1
27.969797
12.697442
2.000419
0
27.969797
4.668281
0
null
0
0
0
1
1
3j9w
AA
U
1,281
null
AA
U
1,282
null
3.2538
identity
basestacks
non-bp
bs
3j9w_AA_1281_AA_1282_U_U
UU
3J9W_AA_1281_AA_1282_U_U
3j9w
U
U
1
13.164149
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3.48932
3.128236
13.164149
3.253794
1
112.880078
1
1
1
1
1
2zjq
X
A
632
null
X
G
633
null
2.9737
identity
basestacks
non-bp
bs
2zjq_X_632_X_633_A_G
AG
2ZJQ_X_632_X_633_A_G
2zjq
A
G
1
24.83138
5.204786
2.992166
0
24.83138
4.190398
0
null
0
0
0
1
1
1yi2
0
C
1,834
null
0
A
1,840
null
3.3607
identity
basestacks
non-bp
bs
1yi2_0_1834_0_1840_C_A
AC
1YI2_0_1834_0_1840_C_A
1yi2
C
A
1
5.078696
7.44378
3.455571
3.366814
5.078696
3.561862
0
null
0
0
0
1
1
3j9w
AA
G
641
null
AA
C
643
null
3.1112
identity
basestacks
non-bp
bs
3j9w_AA_641_AA_643_G_C
CG
3J9W_AA_641_AA_643_G_C
3j9w
G
C
1
13.421642
4.935241
3.608311
2.356816
13.421642
3.111165
2
93.542815
1
1
1
1
1
4tzz
B
A
9
null
B
C
27
null
13.7166
identity
non-interacting
non-bp
non-bs
4tzz_B_9_B_27_A_C
AC
4TZZ_B_9_B_27_A_C
4tzz
A
C
1
14.296326
15.272276
13.827291
0
14.296326
13.767531
0
null
0
0
0
1
1
1yi2
0
A
1,900
null
0
C
1,936
null
4.3502
identity
basepair
bp
non-bs
1yi2_0_1900_0_1936_A_C
AC
1YI2_0_1900_0_1936_A_C
1yi2
A
C
1
15.255009
13.555513
2.788221
0
15.255009
5.359165
0
null
0
0
0
1
1
2zjq
X
U
616
null
X
G
634
null
2.9311
identity
basepair
bp
non-bs
2zjq_X_616_X_634_U_G
GU
2ZJQ_X_616_X_634_U_G
2zjq
U
G
1
19.721463
8.056253
3.032824
0
19.721463
2.931129
2
110.970982
2
1
1
1
1
4v50
BB
A
532
null
BB
A
2,020
null
3.0175
identity
basepair
bp
non-bs
4v50_BB_532_BB_2020_A_A
AA
4V50_BB_532_BB_2020_A_A
4v50
A
A
1
58.258381
7.698882
2.05307
0
58.258381
3.017522
1
120.387561
1
1
1
1
1
6pig
1
U
47
null
1
G
56
null
11.4784
identity
non-interacting
non-bp
non-bs
6pig_1_47_1_56_U_G
GU
6PIG_1_47_1_56_U_G
6pig
U
G
1
1.396783
19.826937
9.824112
0
1.396783
12.461335
0
null
0
0
0
1
1
1z7f
B
C
16
null
C
A
19
null
6.3021
identity
non-interacting
non-bp
non-bs
1z7f_B_16_C_19_C_A
AC
1Z7F_B_16_C_19_C_A
1z7f
C
A
1
12.263113
7.817865
6.32514
0.123996
12.263113
6.373273
0
null
0
0
0
1
1
6ymj
A
C
12
null
I
C
22
null
17.99
identity
non-interacting
non-bp
non-bs
6ymj_A_12_I_22_C_C
CC
6YMJ_A_12_I_22_C_C
6ymj
C
C
1
42.742444
21.608712
5.706277
0
42.742444
19.931941
0
null
0
0
0
1
1
3j9w
AA
U
77
null
AA
G
78
null
3.238
identity
basestacks
non-bp
bs
3j9w_AA_77_AA_78_U_G
GU
3J9W_AA_77_AA_78_U_G
3j9w
U
G
1
12.14326
5.244592
3.27869
0.22071
12.14326
3.321405
1
87.154654
0
0
1
1
1
1yi2
0
U
205
null
0
A
437
null
2.6765
identity
basepair
bp
non-bs
1yi2_0_205_0_437_U_A
AU
1YI2_0_205_0_437_U_A
1yi2
U
A
1
17.804993
10.938266
0.065706
0
17.804993
2.676545
2
113.565132
2
1
1
1
1
1yi2
0
A
1,098
null
0
G
1,258
null
2.8709
identity
basepair
bp
non-bs
1yi2_0_1098_0_1258_A_G
AG
1YI2_0_1098_0_1258_A_G
1yi2
A
G
1
27.323895
9.572846
1.432708
0
27.323895
2.870882
2
135.641438
2
1
1
1
1
5t62
A
A
6
null
A
A
12
null
18.2956
identity
non-interacting
non-bp
non-bs
5t62_A_6_A_12_A_A
AA
5T62_A_6_A_12_A_A
5t62
A
A
1
28.744327
22.789569
17.509902
0
28.744327
18.295573
0
null
0
0
0
1
1
3j9w
BA
C
186
null
BA
A
216
null
3.1175
identity
basepair
bp
non-bs
3j9w_BA_186_BA_216_C_A
AC
3J9W_BA_186_BA_216_C_A
3j9w
C
A
1
52.661546
12.24484
1.270397
0
52.661546
3.11749
1
125.461187
1
1
1
1
1
4x62
A
C
719
null
A
C
720
null
3.5925
identity
basepair
bp
non-bs
4x62_A_719_A_720_C_C
CC
4X62_A_719_A_720_C_C
4x62
C
C
1
30.546051
5.708934
4.016864
2.501566
30.546051
4.189743
0
null
0
0
0
1
1
4ujc
C1
U
577
null
C1
C
579
null
2.5705
identity
basepair
bp
non-bs
4ujc_C1_577_C1_579_U_C
CU
4UJC_C1_577_C1_579_U_C
4ujc
U
C
1
57.624672
8.80908
2.381185
0
57.624672
2.570508
1
114.594974
1
1
1
1
1
2zjq
X
G
1,814
null
X
G
1,815
null
2.973
identity
basestacks
non-bp
bs
2zjq_X_1814_X_1815_G_G
GG
2ZJQ_X_1814_X_1815_G_G
2zjq
G
G
1
12.576569
5.902247
2.863844
0
12.576569
2.972969
1
95.91089
1
1
1
1
1
3j9w
AA
G
255
null
AA
G
286
null
2.9862
identity
basestacks
non-bp
bs
3j9w_AA_255_AA_286_G_G
GG
3J9W_AA_255_AA_286_G_G
3j9w
G
G
1
20.811855
7.942312
3.102478
0
20.811855
2.986185
2
107.226267
1
1
1
1
1
3j9w
BA
G
60
null
BA
G
88
null
2.798
identity
basepair
bp
non-bs
3j9w_BA_60_BA_88_G_G
GG
3J9W_BA_60_BA_88_G_G
3j9w
G
G
1
37.622282
10.888162
1.962693
0
37.622282
2.797993
2
137.0661
2
1
1
1
1
2zjq
X
G
965
null
X
A
966
null
3.4574
identity
basestacks
non-bp
bs
2zjq_X_965_X_966_G_A
AG
2ZJQ_X_965_X_966_G_A
2zjq
G
A
1
7.085718
4.967022
3.440219
2.175982
7.085718
3.60371
0
null
0
0
0
1
1
2zjq
X
C
2,061
null
X
A
2,220
null
3.7257
identity
basepair
bp
non-bs
2zjq_X_2061_X_2220_C_A
AC
2ZJQ_X_2061_X_2220_C_A
2zjq
C
A
1
2.703338
12.926923
1.595032
0
2.703338
4.466067
0
null
0
0
0
1
1
2fmt
C
G
26
null
C
U
27
null
3.2418
identity
basestacks
non-bp
bs
2fmt_C_26_C_27_G_U
GU
2FMT_C_26_C_27_G_U
2fmt
G
U
1
3.638473
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3.258317
1.917229
3.638473
3.737377
0
null
0
0
0
1
1
2zjq
X
G
1,827
null
X
U
1,914
null
2.9081
identity
basepair
bp
non-bs
2zjq_X_1827_X_1914_G_U
GU
2ZJQ_X_1827_X_1914_G_U
2zjq
G
U
1
7.404567
4.779698
2.924735
0
7.404567
3.99339
0
null
0
0
0
1
1
3j9w
AA
C
608
null
AA
A
649
null
3.1243
identity
basestacks
non-bp
bs
3j9w_AA_608_AA_649_C_A
AC
3J9W_AA_608_AA_649_C_A
3j9w
C
A
1
16.156403
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3.005821
0
16.156403
3.987871
0
null
0
0
0
1
1
4ujc
A2
A
2,395
null
A2
A
2,406
null
3.8152
identity
basepair
bp
non-bs
4ujc_A2_2395_A2_2406_A_A
AA
4UJC_A2_2395_A2_2406_A_A
4ujc
A
A
1
26.473187
9.527369
1.599441
0
26.473187
3.815179
0
null
0
0
0
1
1
3k0j
F
C
118
null
F
C
119
null
3.8766
identity
basepair
bp
non-bs
3k0j_F_118_F_119_C_C
CC
3K0J_F_118_F_119_C_C
3k0j
C
C
1
51.420339
7.045537
1.709184
0
51.420339
4.011066
0
null
0
0
0
1
1
2zjq
X
G
600
null
X
U
680
null
4.2514
identity
basestacks
non-bp
bs
2zjq_X_600_X_680_G_U
GU
2ZJQ_X_600_X_680_G_U
2zjq
G
U
1
8.779238
8.963218
4.384102
0
8.779238
4.251434
0
null
0
0
0
1
1
3j9w
BA
A
1,103
null
BA
U
1,104
null
3.3691
identity
basestacks
non-bp
bs
3j9w_BA_1103_BA_1104_A_U
AU
3J9W_BA_1103_BA_1104_A_U
3j9w
A
U
1
15.171979
6.520438
3.350433
0
15.171979
3.929707
0
null
0
0
0
1
1
5w1h
B
A
-14
null
B
A
-11
null
14.139
identity
non-interacting
non-bp
non-bs
5w1h_B_-14_B_-11_A_A
AA
5W1H_B_-14_B_-11_A_A
5w1h
A
A
1
70.404931
16.136782
8.162676
0
70.404931
14.216005
0
null
0
0
0
1
1
1yi2
0
C
770
null
0
G
892
null
3.5235
identity
basestacks
non-bp
bs
1yi2_0_770_0_892_C_G
CG
1YI2_0_770_0_892_C_G
1yi2
C
G
1
8.548213
7.472923
3.398245
0
8.548213
3.527692
0
null
0
0
0
1
1
3j9w
AA
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1,144
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identity
basepair
bp
non-bs
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identity
non-interacting
non-bp
non-bs
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null
0
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1
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identity
basepair
bp
non-bs
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104.34544
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1
1
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identity
basepair
bp
non-bs
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1
1
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identity
basepair
bp
non-bs
3j9w_AA_266_AA_276_A_U
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1
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1
1
1
1
2zjq
X
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identity
basestacks
non-bp
bs
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identity
non-interacting
non-bp
non-bs
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1
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1yi2
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identity
basestacks
non-bp
bs
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103.76027
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1
1
1
1
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identity
non-interacting
non-bp
non-bs
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identity
basestacks
non-bp
bs
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0
1
1
1
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identity
basestacks
non-bp
bs
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null
0
0
0
1
1
1yi2
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identity
basepair
bp
non-bs
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1yi2
U
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1
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null
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identity
non-interacting
non-bp
non-bs
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AC
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null
0
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0
1
1
1yi2
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identity
basepair
bp
non-bs
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1
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null
0
0
0
1
1
2zjq
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null
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identity
basestacks
non-bp
bs
2zjq_X_1755_X_1972_G_G
GG
2ZJQ_X_1755_X_1972_G_G
2zjq
G
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1
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98.418708
1
1
1
1
1
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identity
non-interacting
non-bp
non-bs
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CC
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C
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1
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null
0
0
0
1
1
1yi2
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null
0
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null
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identity
basestacks
non-bp
bs
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AC
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1yi2
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1
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null
0
0
0
1
1
6ymj
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C
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identity
non-interacting
non-bp
non-bs
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null
0
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0
1
1
1yi2
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null
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identity
basepair
bp
non-bs
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1
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110.995001
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1
1
1
1
1yi2
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null
0
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null
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identity
basestacks
non-bp
bs
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CU
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null
0
0
0
1
1
1yi2
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null
0
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null
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identity
basestacks
non-bp
bs
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AC
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1
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null
0
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0
1
1
5tzs
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50
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1
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392
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identity
non-interacting
non-bp
non-bs
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CG
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1
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null
0
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1
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1yi2
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identity
basestacks
non-bp
bs
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null
0
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0
1
1
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null
A
U
12
null
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identity
non-interacting
non-bp
non-bs
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AU
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null
0
0
0
1
1
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null
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null
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identity
basepair
bp
non-bs
3j9w_BA_19_BA_567_G_U
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3
1
1
1
1
4lf5
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null
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223
null
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identity
basepair
bp
non-bs
4lf5_A_182_A_223_U_U
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1
1
1
1
1
2zjq
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identity
basestacks
non-bp
bs
2zjq_X_809_X_810_C_U
CU
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2zjq
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1
1
1
1
1
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identity
non-interacting
non-bp
non-bs
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CU
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null
0
0
0
1
1
2zjq
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null
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null
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identity
basestacks
non-bp
bs
2zjq_X_845_X_846_U_A
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2ZJQ_X_845_X_846_U_A
2zjq
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1
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null
0
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0
1
1
5no4
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identity
non-interacting
non-bp
non-bs
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AG
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5no4
A
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1
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23.957259
24.602701
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null
0
0
0
1
1
1yi2
0
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705
null
0
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null
3.199
identity
basestacks
non-bp
bs
1yi2_0_705_0_706_C_G
CG
1YI2_0_705_0_706_C_G
1yi2
C
G
1
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3.560275
0
null
0
0
0
1
1
4tzy
X
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null
X
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null
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identity
non-interacting
non-bp
non-bs
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CU
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1
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null
0
0
0
1
1
1yi2
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null
0
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null
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identity
basepair
bp
non-bs
1yi2_0_2404_0_2419_G_U
GU
1YI2_0_2404_0_2419_G_U
1yi2
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U
1
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0
null
0
0
0
1
1
2zjq
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null
X
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null
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identity
basestacks
non-bp
bs
2zjq_X_1828_X_1829_C_C
CC
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1
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null
0
0
0
1
1
6x7f
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null
D
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1,516
null
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identity
non-interacting
non-bp
non-bs
6x7f_7_-18_D_1516_G_G
GG
6X7F_7_-18_D_1516_G_G
6x7f
G
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1
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45.887612
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null
0
0
0
1
1
1yi2
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null
0
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null
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identity
basestacks
non-bp
bs
1yi2_0_1409_0_1410_G_G
GG
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1
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82.641358
0
0
1
1
1
1yi2
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null
0
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null
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identity
basestacks
non-bp
bs
1yi2_0_1145_0_1219_G_U
GU
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67.858431
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0
1
1
1
2zjq
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null
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null
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identity
basestacks
non-bp
bs
2zjq_X_1366_X_1367_A_A
AA
2ZJQ_X_1366_X_1367_A_A
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null
0
0
0
1
1
3ucu
R
A
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92
null
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identity
non-interacting
non-bp
non-bs
3ucu_R_12_R_92_A_C
AC
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1
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null
0
0
0
1
1
1yi2
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0
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null
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identity
basepair
bp
non-bs
1yi2_0_2093_0_2652_G_U
GU
1YI2_0_2093_0_2652_G_U
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1
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15.621675
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3
118.607696
2
1
1
1
1
2zjq
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null
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null
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identity
basestacks
non-bp
bs
2zjq_X_949_X_950_G_G
GG
2ZJQ_X_949_X_950_G_G
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1
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1
80.188315
0
0
1
1
1
2zjq
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null
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null
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identity
basepair
bp
non-bs
2zjq_X_647_X_649_G_G
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2ZJQ_X_647_X_649_G_G
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G
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1
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null
0
0
0
1
1
3j9w
BA
C
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null
BA
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995
null
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identity
basestacks
non-bp
bs
3j9w_BA_994_BA_995_C_U
CU
3J9W_BA_994_BA_995_C_U
3j9w
C
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1
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1
87.300288
0
0
1
1
1
6gqb
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3
null
1
C
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null
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identity
non-interacting
non-bp
non-bs
6gqb_1_3_1_8_U_C
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6gqb
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21.070414
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null
0
0
0
1
1
2zjq
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null
X
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1,036
null
2.9832
identity
basestacks
non-bp
bs
2zjq_X_1035_X_1036_G_G
GG
2ZJQ_X_1035_X_1036_G_G
2zjq
G
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1
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2
91.928979
2
1
1
1
1
4x62
A
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404
null
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null
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identity
basepair
bp
non-bs
4x62_A_404_A_498_U_U
UU
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U
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1
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13.344759
2.630298
1
112.305166
1
1
1
1
1
3ov7
C
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null
C
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null
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identity
non-interacting
non-bp
non-bs
3ov7_C_1_C_25_G_U
GU
3OV7_C_1_C_25_G_U
3ov7
G
U
1
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null
0
0
0
1
1
3j9w
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null
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identity
basestacks
non-bp
bs
3j9w_AA_482_AA_483_G_G
GG
3J9W_AA_482_AA_483_G_G
3j9w
G
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1
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0
null
0
0
0
1
1
3j9w
BA
A
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null
BA
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1,844
null
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identity
basepair
bp
non-bs
3j9w_BA_1831_BA_1844_A_A
AA
3J9W_BA_1831_BA_1844_A_A
3j9w
A
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1
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2
130.560494
2
1
1
1
1
2zjq
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G
11
null
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12
null
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identity
basestacks
non-bp
bs
2zjq_X_11_X_12_G_U
GU
2ZJQ_X_11_X_12_G_U
2zjq
G
U
1
8.024422
5.271867
3.990364
0.675292
8.024422
4.169439
0
null
0
0
0
1
1
3j9w
AA
C
1,217
null
AA
C
1,218
null
3.5684
identity
basestacks
non-bp
bs
3j9w_AA_1217_AA_1218_C_C
CC
3J9W_AA_1217_AA_1218_C_C
3j9w
C
C
1
5.879584
5.360517
3.720367
0.390855
5.879584
4.15039
0
null
0
0
0
1
1
2zjq
X
C
2,815
null
X
C
2,816
null
3.4776
identity
basestacks
non-bp
bs
2zjq_X_2815_X_2816_C_C
CC
2ZJQ_X_2815_X_2816_C_C
2zjq
C
C
1
10.300957
5.678432
3.629095
0.024048
10.300957
3.623316
0
null
0
0
0
1
1
3j9w
BA
C
2,092
null
BA
C
2,093
null
3.4829
identity
basestacks
non-bp
bs
3j9w_BA_2092_BA_2093_C_C
CC
3J9W_BA_2092_BA_2093_C_C
3j9w
C
C
1
20.75687
5.832682
3.741358
1.238565
20.75687
3.984715
0
null
0
0
0
1
1