pdb_id
string
chain1
string
res_name1
string
res_seq_num1
int64
ins_code1
string
chain2
string
res_name2
string
res_seq_num2
int64
ins_code2
string
min_distance
float64
symmetry_op
string
label_final
string
label_bp
string
label_bs
string
filename
string
pair_type
string
pair_id
string
pdb_key
string
base1_type
string
base2_type
string
geometry_ok_01
float64
base_plane_angle_deg
float64
c1p_c1p_distance_A
float64
stack_interplane_distance_A
float64
stack_overlap_area_A2
float64
stack_parallel_plane_angle_deg
float64
hbond_min_da_dist
float64
hbond_num_da_lt_3p5
float64
hbond_max_angle_for_da_lt_3p5
float64
hbond_num_full
float64
hbond_pattern_present_01
float64
hbond_angle_defined_01
float64
coords_found_01
int64
core_feature_found_01
int64
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B
U
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U
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null
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identity
non-interacting
non-bp
non-bs
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UU
5MGA_B_-10_B_-8_U_U
5mga
U
U
1
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0
null
0
0
0
1
1
3j9w
AA
U
260
null
AA
A
282
null
2.8939
identity
basepair
bp
non-bs
3j9w_AA_260_AA_282_U_A
AU
3J9W_AA_260_AA_282_U_A
3j9w
U
A
1
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0
37.304125
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2
135.550205
1
1
1
1
1
1yi2
0
G
691
null
0
A
693
null
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identity
basepair
bp
non-bs
1yi2_0_691_0_693_G_A
AG
1YI2_0_691_0_693_G_A
1yi2
G
A
1
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0
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0
null
0
0
0
1
1
2zjq
X
G
697
null
X
A
787
null
3.0777
identity
basestacks
non-bp
bs
2zjq_X_697_X_787_G_A
AG
2ZJQ_X_697_X_787_G_A
2zjq
G
A
1
11.448051
8.822061
3.413867
1.636954
11.448051
3.12963
1
100.051537
1
1
1
1
1
1yi2
0
U
582
null
0
C
583
null
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identity
basestacks
non-bp
bs
1yi2_0_582_0_583_U_C
CU
1YI2_0_582_0_583_U_C
1yi2
U
C
1
5.918921
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3.609069
0
5.918921
3.668027
0
null
0
0
0
1
1
2zjq
X
U
1,101
null
X
C
1,113
null
3.3769
identity
basestacks
non-bp
bs
2zjq_X_1101_X_1113_U_C
CU
2ZJQ_X_1101_X_1113_U_C
2zjq
U
C
1
38.743709
5.425968
3.302728
0
38.743709
3.376854
1
79.989563
0
0
1
1
1
2zjq
X
G
147
null
X
A
149
null
4.4066
identity
basepair
bp
non-bs
2zjq_X_147_X_149_G_A
AG
2ZJQ_X_147_X_149_G_A
2zjq
G
A
1
11.65938
8.547835
4.065131
0
11.65938
4.656055
0
null
0
0
0
1
1
6zxf
2
U
5
null
2
C
13
null
16.5466
identity
non-interacting
non-bp
non-bs
6zxf_2_5_2_13_U_C
CU
6ZXF_2_5_2_13_U_C
6zxf
U
C
1
15.047381
18.948915
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0
15.047381
16.976461
0
null
0
0
0
1
1
4oq9
m
U
185
null
m
U
186
null
3.213
identity
basestacks
non-bp
bs
4oq9_m_185_m_186_U_U
UU
4OQ9_M_185_M_186_U_U
4oq9
U
U
1
14.449097
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3.441739
0
14.449097
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0
null
0
0
0
1
1
1yi2
0
A
1,842
null
0
A
2,024
null
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identity
basestacks
non-bp
bs
1yi2_0_1842_0_2024_A_A
AA
1YI2_0_1842_0_2024_A_A
1yi2
A
A
1
55.55706
8.706438
5.717109
0
55.55706
5.996934
0
null
0
0
0
1
1
3j9w
AA
C
492
null
AA
G
493
null
3.1177
identity
basestacks
non-bp
bs
3j9w_AA_492_AA_493_C_G
CG
3J9W_AA_492_AA_493_C_G
3j9w
C
G
1
19.996394
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3.229639
2.039632
19.996394
3.824594
0
null
0
0
0
1
1
1yi2
0
U
651
null
0
G
652
null
3.4317
identity
basepair
bp
non-bs
1yi2_0_651_0_652_U_G
GU
1YI2_0_651_0_652_U_G
1yi2
U
G
1
11.14056
5.53242
3.156794
0
11.14056
3.43168
1
101.528951
1
1
1
1
1
1yi2
0
U
1,422
null
0
A
1,442
null
2.9645
identity
basepair
bp
non-bs
1yi2_0_1422_0_1442_U_A
AU
1YI2_0_1422_0_1442_U_A
1yi2
U
A
1
10.842294
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0.288795
0
10.842294
2.964452
2
116.058443
2
1
1
1
1
1yi2
0
A
1,515
null
0
G
1,672
null
3.2276
identity
basestacks
non-bp
bs
1yi2_0_1515_0_1672_A_G
AG
1YI2_0_1515_0_1672_A_G
1yi2
A
G
1
1.819642
8.211471
3.164333
0.006257
1.819642
3.227649
3
99.330956
1
1
1
1
1
1yi2
0
C
1,428
null
0
U
1,429
null
3.1134
identity
basestacks
non-bp
bs
1yi2_0_1428_0_1429_C_U
CU
1YI2_0_1428_0_1429_C_U
1yi2
C
U
1
16.953897
5.619258
3.536016
1.740225
16.953897
3.113361
1
87.090919
0
0
1
1
1
1yi2
0
C
1,935
null
0
C
1,936
null
3.1609
identity
basestacks
non-bp
bs
1yi2_0_1935_0_1936_C_C
CC
1YI2_0_1935_0_1936_C_C
1yi2
C
C
1
17.68222
5.680797
3.332403
0.013792
17.68222
3.847968
0
null
0
0
0
1
1
1yi2
0
A
2,095
null
0
A
2,612
null
2.8749
identity
basepair
bp
non-bs
1yi2_0_2095_0_2612_A_A
AA
1YI2_0_2095_0_2612_A_A
1yi2
A
A
1
26.839863
11.996706
0.924177
0
26.839863
2.874875
2
130.885823
2
1
1
1
1
2fmt
D
A
11
null
D
C
25
null
3.4009
identity
basestacks
non-bp
bs
2fmt_D_11_D_25_A_C
AC
2FMT_D_11_D_25_A_C
2fmt
A
C
1
1.47321
7.144994
3.428826
0
1.47321
3.519003
0
null
0
0
0
1
1
4v50
AA
U
5
null
AA
C
612
null
15.1958
identity
non-interacting
non-bp
non-bs
4v50_AA_5_AA_612_U_C
CU
4V50_AA_5_AA_612_U_C
4v50
U
C
1
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8.960942
0
65.206502
16.923335
0
null
0
0
0
1
1
1yi2
0
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2,329
null
0
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null
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identity
basestacks
non-bp
bs
1yi2_0_2329_0_2330_C_U
CU
1YI2_0_2329_0_2330_C_U
1yi2
C
U
1
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0
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1
86.332492
0
0
1
1
1
3j9w
AA
C
1,081
null
AA
A
1,115
null
3.2552
identity
basestacks
non-bp
bs
3j9w_AA_1081_AA_1115_C_A
AC
3J9W_AA_1081_AA_1115_C_A
3j9w
C
A
1
14.822473
7.464317
3.282407
0
14.822473
4.305512
0
null
0
0
0
1
1
1nlc
A
A
16
null
A
A
22
null
17.0851
identity
non-interacting
non-bp
non-bs
1nlc_A_16_A_22_A_A
AA
1NLC_A_16_A_22_A_A
1nlc
A
A
1
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0
34.316628
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0
null
0
0
0
1
1
4v50
BB
A
1,308
null
BB
A
1,608
null
2.9572
identity
basepair
bp
non-bs
4v50_BB_1308_BB_1608_A_A
AA
4V50_BB_1308_BB_1608_A_A
4v50
A
A
1
48.041882
13.439862
1.77041
0
48.041882
2.957232
2
110.66657
2
1
1
1
1
4v50
AA
A
520
null
AA
A
533
null
3.012
identity
basepair
bp
non-bs
4v50_AA_520_AA_533_A_A
AA
4V50_AA_520_AA_533_A_A
4v50
A
A
1
52.972022
13.480627
1.139105
0
52.972022
3.011964
1
117.528337
1
1
1
1
1
1nlc
A
A
8
null
B
A
8
null
12.2446
identity
non-interacting
non-bp
non-bs
1nlc_A_8_B_8_A_A
AA
1NLC_A_8_B_8_A_A
1nlc
A
A
1
88.68631
11.876988
8.367277
0
88.68631
15.407287
0
null
0
0
0
1
1
2zjq
X
G
965
null
X
A
2,253
null
2.9168
identity
basepair
bp
non-bs
2zjq_X_965_X_2253_G_A
AG
2ZJQ_X_965_X_2253_G_A
2zjq
G
A
1
50.9684
7.760604
2.75457
0
50.9684
3.417765
1
105.594828
1
1
1
1
1
5zej
A
C
7
null
B
C
38
null
8.7108
identity
non-interacting
non-bp
non-bs
5zej_A_7_B_38_C_C
CC
5ZEJ_A_7_B_38_C_C
5zej
C
C
1
35.480451
17.888842
6.123905
0
35.480451
10.369985
0
null
0
0
0
1
1
2zjq
X
A
703
null
X
G
793
null
8.9429
identity
basepair
bp
non-bs
2zjq_X_703_X_793_A_G
AG
2ZJQ_X_703_X_793_A_G
2zjq
A
G
1
58.250534
7.692915
5.942322
0
58.250534
13.812697
0
null
0
0
0
1
1
5w1h
B
A
-6
null
B
A
-2
null
7.3767
identity
non-interacting
non-bp
non-bs
5w1h_B_-6_B_-2_A_A
AA
5W1H_B_-6_B_-2_A_A
5w1h
A
A
1
64.745292
11.761325
3.845151
0
64.745292
7.438961
0
null
0
0
0
1
1
4v50
AA
U
1,301
null
AA
C
1,302
null
3.8922
identity
basepair
bp
non-bs
4v50_AA_1301_AA_1302_U_C
CU
4V50_AA_1301_AA_1302_U_C
4v50
U
C
1
51.571747
6.755898
1.90995
0
51.571747
5.678885
0
null
0
0
0
1
1
3j9w
AA
C
87
null
AA
U
88
null
3.4729
identity
basestacks
non-bp
bs
3j9w_AA_87_AA_88_C_U
CU
3J9W_AA_87_AA_88_C_U
3j9w
C
U
1
21.041158
4.984827
3.994191
3.696873
21.041158
3.472889
1
91.875529
1
1
1
1
1
1yi2
0
C
139
null
0
G
140
null
4.438
identity
basestacks
non-bp
bs
1yi2_0_139_0_140_C_G
CG
1YI2_0_139_0_140_C_G
1yi2
C
G
1
8.747557
7.167251
3.753336
0
8.747557
4.965831
0
null
0
0
0
1
1
3j9w
AA
A
10
null
AA
G
533
null
15.9997
identity
non-interacting
non-bp
non-bs
3j9w_AA_10_AA_533_A_G
AG
3J9W_AA_10_AA_533_A_G
3j9w
A
G
1
47.780922
20.939679
14.885899
0
47.780922
16.050546
0
null
0
0
0
1
1
4lf5
A
A
8
null
A
C
507
null
12.6403
identity
non-interacting
non-bp
non-bs
4lf5_A_8_A_507_A_C
AC
4LF5_A_8_A_507_A_C
4lf5
A
C
1
78.756708
14.607613
9.289432
0
78.756708
15.642184
0
null
0
0
0
1
1
2zjq
Y
C
40
null
Y
U
50
null
4.9097
identity
basepair
bp
non-bs
2zjq_Y_40_Y_50_C_U
CU
2ZJQ_Y_40_Y_50_C_U
2zjq
C
U
1
7.737125
6.164399
0.38654
0
7.737125
6.162425
0
null
0
0
0
1
1
6qzp
L5
C
1
null
L5
C
4,114
null
24.4471
identity
non-interacting
non-bp
non-bs
6qzp_L5_1_L5_4114_C_C
CC
6QZP_L5_1_L5_4114_C_C
6qzp
C
C
1
67.263824
29.851254
21.854707
0
67.263824
24.655201
0
null
0
0
0
1
1
1yi2
0
U
555
null
0
A
602
null
2.8434
identity
basepair
bp
non-bs
1yi2_0_555_0_602_U_A
AU
1YI2_0_555_0_602_U_A
1yi2
U
A
1
13.249664
10.994433
0.75702
0
13.249664
2.843401
2
124.216578
2
1
1
1
1
4v50
BB
A
2,284
null
BB
A
2,288
null
3.6874
identity
basepair
bp
non-bs
4v50_BB_2284_BB_2288_A_A
AA
4V50_BB_2284_BB_2288_A_A
4v50
A
A
1
47.510715
8.689602
3.291842
0
47.510715
6.558557
0
null
0
0
0
1
1
3j9w
AA
A
329
null
AA
C
336
null
3.1611
identity
basestacks
non-bp
bs
3j9w_AA_329_AA_336_A_C
AC
3J9W_AA_329_AA_336_A_C
3j9w
A
C
1
34.303718
7.218552
2.680156
0
34.303718
5.886067
0
null
0
0
0
1
1
1yi2
0
A
191
null
0
A
435
null
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identity
basepair
bp
non-bs
1yi2_0_191_0_435_A_A
AA
1YI2_0_191_0_435_A_A
1yi2
A
A
1
22.096248
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1.74906
0
22.096248
4.242328
0
null
0
0
0
1
1
1yi2
0
G
81
null
0
A
98
null
2.9883
identity
basepair
bp
non-bs
1yi2_0_81_0_98_G_A
AG
1YI2_0_81_0_98_G_A
1yi2
G
A
1
55.003831
7.907294
3.245921
0
55.003831
3.057073
1
109.687865
1
1
1
1
1
1yi2
0
C
62
null
0
A
70
null
4.0201
identity
basepair
bp
non-bs
1yi2_0_62_0_70_C_A
AC
1YI2_0_62_0_70_C_A
1yi2
C
A
1
26.507176
11.88273
2.798618
0
26.507176
4.628568
0
null
0
0
0
1
1
1yi2
0
U
211
null
0
G
229
null
3.5062
identity
basestacks
non-bp
bs
1yi2_0_211_0_229_U_G
GU
1YI2_0_211_0_229_U_G
1yi2
U
G
1
5.703585
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3.322875
0
5.703585
3.797329
0
null
0
0
0
1
1
3j9w
BA
C
136
null
BA
A
144
null
3.4183
identity
basestacks
non-bp
bs
3j9w_BA_136_BA_144_C_A
AC
3J9W_BA_136_BA_144_C_A
3j9w
C
A
1
11.551058
7.478075
3.454162
0
11.551058
4.14351
0
null
0
0
0
1
1
1yi2
0
G
1,925
null
0
G
1,926
null
3.2774
identity
basestacks
non-bp
bs
1yi2_0_1925_0_1926_G_G
GG
1YI2_0_1925_0_1926_G_G
1yi2
G
G
1
2.225889
5.53219
3.278211
0.642056
2.225889
3.454951
1
92.574016
1
1
1
1
1
6nmd
G
U
12
null
G
A
21
null
14.345
identity
non-interacting
non-bp
non-bs
6nmd_G_12_G_21_U_A
AU
6NMD_G_12_G_21_U_A
6nmd
U
A
1
64.819772
19.595944
14.057731
2.667377
64.819772
14.733028
0
null
0
0
0
1
1
3j9w
BA
U
348
null
BA
G
357
null
2.865
identity
basepair
bp
non-bs
3j9w_BA_348_BA_357_U_G
GU
3J9W_BA_348_BA_357_U_G
3j9w
U
G
1
21.888087
10.584333
0.712771
0
21.888087
2.864964
2
117.579928
2
1
1
1
1
4ujc
A2
C
3,880
null
A2
U
4,355
null
2.7792
identity
basepair
bp
non-bs
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1
1
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identity
basestacks
non-bp
bs
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1yi2
C
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1
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null
0
0
0
1
1
2zjq
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identity
basepair
bp
non-bs
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AC
2ZJQ_X_33_X_466_C_A
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C
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null
0
0
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1
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4ujc
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identity
non-interacting
non-bp
non-bs
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AC
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C
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null
0
0
0
1
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3j9w
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C
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identity
basestacks
non-bp
bs
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CG
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C
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105.767155
1
1
1
1
1
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identity
basepair
bp
non-bs
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1
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identity
basestacks
non-bp
bs
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1
1
1
1
1
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identity
non-interacting
non-bp
non-bs
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identity
basestacks
non-bp
bs
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AC
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identity
basestacks
non-bp
bs
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identity
non-interacting
non-bp
non-bs
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identity
non-interacting
non-bp
non-bs
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identity
non-interacting
non-bp
non-bs
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AA
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null
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1
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null
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identity
basestacks
non-bp
bs
2zjq_X_1704_X_1705_G_U
GU
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1
1
1
1
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identity
basestacks
non-bp
bs
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identity
basestacks
non-bp
bs
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CG
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1
1
1
1
1
1yi2
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identity
basestacks
non-bp
bs
1yi2_0_2656_0_2657_G_G
GG
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null
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identity
basestacks
non-bp
bs
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null
0
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identity
basepair
bp
non-bs
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1
1
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identity
basepair
bp
non-bs
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CC
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1
1
1
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identity
basepair
bp
non-bs
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AG
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A
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null
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null
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identity
basepair
bp
non-bs
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AC
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1
1
1
1
1
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null
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null
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identity
basestacks
non-bp
bs
2zjq_X_2070_X_2212_G_U
GU
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2zjq
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1
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1
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1
1
1
1
1
3j9w
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A
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null
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identity
basestacks
non-bp
bs
3j9w_AA_776_AA_777_A_A
AA
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3j9w
A
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B
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null
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identity
non-interacting
non-bp
non-bs
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AG
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4tzz
A
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1
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null
0
0
0
1
1
2zjq
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null
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null
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identity
basestacks
non-bp
bs
2zjq_X_2027_X_2028_C_C
CC
2ZJQ_X_2027_X_2028_C_C
2zjq
C
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1
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null
0
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0
1
1
3j9w
AA
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null
AA
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null
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identity
basestacks
non-bp
bs
3j9w_AA_824_AA_1539_A_G
AG
3J9W_AA_824_AA_1539_A_G
3j9w
A
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1
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1
84.057235
0
0
1
1
1
3j9w
AA
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null
AA
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null
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identity
basepair
bp
non-bs
3j9w_AA_1524_AA_1531_U_G
GU
3J9W_AA_1524_AA_1531_U_G
3j9w
U
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1
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3
125.210806
3
1
1
1
1
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A
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null
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null
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identity
non-interacting
non-bp
non-bs
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UU
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null
0
0
0
1
1
3j9w
AA
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null
AA
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null
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identity
basestacks
non-bp
bs
3j9w_AA_867_AA_868_U_G
GU
3J9W_AA_867_AA_868_U_G
3j9w
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0
null
0
0
0
1
1
2zjq
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null
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identity
basepair
bp
non-bs
2zjq_X_134_X_137_G_A
AG
2ZJQ_X_134_X_137_G_A
2zjq
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null
0
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1
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null
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identity
non-interacting
non-bp
non-bs
3ucu_R_11_R_51_C_C
CC
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3ucu
C
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1
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null
0
0
0
1
1
1yi2
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null
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identity
basepair
bp
non-bs
1yi2_0_929_0_1041_A_U
AU
1YI2_0_929_0_1041_A_U
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1
152.408602
1
1
1
1
1
4csu
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null
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identity
non-interacting
non-bp
non-bs
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GU
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null
0
0
0
1
1
3j9w
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null
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null
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identity
basepair
bp
non-bs
3j9w_BA_2534_BA_2610_G_G
GG
3J9W_BA_2534_BA_2610_G_G
3j9w
G
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null
0
0
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1
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2zjq
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null
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null
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identity
basestacks
non-bp
bs
2zjq_X_1479_X_1480_G_G
GG
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2
133.016675
1
1
1
1
1
1yi2
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identity
basepair
bp
non-bs
1yi2_0_909_0_1296_U_A
AU
1YI2_0_909_0_1296_U_A
1yi2
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1
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2
120.516657
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1
1
1
1
1yi2
0
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null
0
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null
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identity
basestacks
non-bp
bs
1yi2_0_1004_0_1005_C_A
AC
1YI2_0_1004_0_1005_C_A
1yi2
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1
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null
0
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1
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1yi2
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identity
basepair
bp
non-bs
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CG
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1
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121.416003
3
1
1
1
1
2zjq
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null
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null
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identity
non-interacting
non-bp
non-bs
2zjq_X_7_X_2608_G_A
AG
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null
0
0
0
1
1
2zjq
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null
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identity
basestacks
non-bp
bs
2zjq_X_1638_X_1639_G_U
GU
2ZJQ_X_1638_X_1639_G_U
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2
118.31804
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1
1
1
1
1yi2
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null
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identity
basestacks
non-bp
bs
1yi2_0_664_0_681_U_G
GU
1YI2_0_664_0_681_U_G
1yi2
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null
0
0
0
1
1
1yi2
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null
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null
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identity
basestacks
non-bp
bs
1yi2_0_194_0_195_A_C
AC
1YI2_0_194_0_195_A_C
1yi2
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1
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0
null
0
0
0
1
1
6ymj
A
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15
null
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A
48
null
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identity
non-interacting
non-bp
non-bs
6ymj_A_15_J_48_C_A
AC
6YMJ_A_15_J_48_C_A
6ymj
C
A
1
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null
0
0
0
1
1
3j9w
BA
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null
BA
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null
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identity
basestacks
non-bp
bs
3j9w_BA_1533_BA_1549_A_U
AU
3J9W_BA_1533_BA_1549_A_U
3j9w
A
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1
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0
null
0
0
0
1
1
1yi2
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null
0
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1,693
null
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identity
basestacks
non-bp
bs
1yi2_0_842_0_1693_C_A
AC
1YI2_0_842_0_1693_C_A
1yi2
C
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1
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0
null
0
0
0
1
1
2zjq
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null
X
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1,129
null
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identity
basestacks
non-bp
bs
2zjq_X_1049_X_1129_C_A
AC
2ZJQ_X_1049_X_1129_C_A
2zjq
C
A
1
14.654641
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14.654641
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null
0
0
0
1
1
1yi2
0
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489
null
0
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490
null
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identity
basestacks
non-bp
bs
1yi2_0_489_0_490_A_C
AC
1YI2_0_489_0_490_A_C
1yi2
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1
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0
1
1
1
3j9w
BB
C
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null
BB
C
41
null
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identity
basestacks
non-bp
bs
3j9w_BB_40_BB_41_C_C
CC
3J9W_BB_40_BB_41_C_C
3j9w
C
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1
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null
0
0
0
1
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2zjq
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null
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963
null
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identity
basestacks
non-bp
bs
2zjq_X_962_X_963_C_G
CG
2ZJQ_X_962_X_963_C_G
2zjq
C
G
1
35.827097
5.905803
2.757208
0
35.827097
3.426977
2
117.905029
1
1
1
1
1
6yrq
G
U
1
null
G
U
2
null
6.829
identity
non-interacting
non-bp
non-bs
6yrq_G_1_G_2_U_U
UU
6YRQ_G_1_G_2_U_U
6yrq
U
U
1
72.539448
7.97549
2.705946
0
72.539448
9.174143
0
null
0
0
0
1
1
1yi2
0
A
2,394
null
0
A
2,395
null
3.4802
identity
basepair
bp
non-bs
1yi2_0_2394_0_2395_A_A
AA
1YI2_0_2394_0_2395_A_A
1yi2
A
A
1
36.595293
6.438324
1.873355
0
36.595293
4.032733
0
null
0
0
0
1
1
4v50
AA
C
1,200
null
AA
U
1,205
null
2.5738
identity
basepair
bp
non-bs
4v50_AA_1200_AA_1205_C_U
CU
4V50_AA_1200_AA_1205_C_U
4v50
C
U
1
17.293158
8.183848
0.547517
0
17.293158
2.573807
1
117.973567
1
1
1
1
1