pdb_id
string
chain1
string
res_name1
string
res_seq_num1
int64
ins_code1
string
chain2
string
res_name2
string
res_seq_num2
int64
ins_code2
string
min_distance
float64
symmetry_op
string
label_final
string
label_bp
string
label_bs
string
filename
string
pair_type
string
pair_id
string
pdb_key
string
base1_type
string
base2_type
string
geometry_ok_01
float64
base_plane_angle_deg
float64
c1p_c1p_distance_A
float64
stack_interplane_distance_A
float64
stack_overlap_area_A2
float64
stack_parallel_plane_angle_deg
float64
hbond_min_da_dist
float64
hbond_num_da_lt_3p5
float64
hbond_max_angle_for_da_lt_3p5
float64
hbond_num_full
float64
hbond_pattern_present_01
float64
hbond_angle_defined_01
float64
coords_found_01
int64
core_feature_found_01
int64
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bp
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1
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identity
basepair
bp
non-bs
3dll_X_2531_X_2535_U_C
CU
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1
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identity
non-interacting
non-bp
non-bs
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1
1
1s72
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identity
basepair
bp
non-bs
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identity
non-interacting
non-bp
non-bs
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AU
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identity
non-interacting
non-bp
non-bs
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identity
non-interacting
non-bp
non-bs
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CG
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basestacks
non-bp
bs
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1
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1
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basestacks
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bs
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AC
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non-interacting
non-bp
non-bs
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CC
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basepair
bp
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identity
basestacks
non-bp
bs
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CG
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4v6o
AA
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identity
basepair
bp
non-bs
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110.590231
1
1
1
1
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1s72
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identity
basestacks
non-bp
bs
1s72_0_1595_0_1596_G_U
GU
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0
null
0
0
0
1
1
3dll
X
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null
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1,622
null
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identity
basepair
bp
non-bs
3dll_X_1322_X_1622_G_G
GG
3DLL_X_1322_X_1622_G_G
3dll
G
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1
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1
1
1
1
1
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null
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identity
non-interacting
non-bp
non-bs
3bbv_z_9_z_50_A_U
AU
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null
0
0
0
1
1
1s72
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null
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identity
basestacks
non-bp
bs
1s72_0_941_0_942_G_U
GU
1S72_0_941_0_942_G_U
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null
0
0
0
1
1
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identity
basestacks
non-bp
bs
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GU
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basestacks
non-bp
bs
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identity
basestacks
non-bp
bs
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AC
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1s72
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null
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1
1
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C
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C
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null
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identity
basestacks
non-bp
bs
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AG
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0
0
1
1
1
1s72
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0
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identity
basestacks
non-bp
bs
1s72_0_1269_0_1290_G_G
GG
1S72_0_1269_0_1290_G_G
1s72
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1
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null
0
0
0
1
1
1s72
0
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0
G
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null
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identity
basestacks
non-bp
bs
1s72_0_1291_0_1292_A_G
AG
1S72_0_1291_0_1292_A_G
1s72
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1
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1.856414
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3.350628
1
103.470957
1
1
1
1
1
3dll
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null
X
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null
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identity
basestacks
non-bp
bs
3dll_X_2176_X_2177_U_U
UU
3DLL_X_2176_X_2177_U_U
3dll
U
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1
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3.679532
0
null
0
0
0
1
1
3bbv
z
C
3
null
z
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71
null
2.6549
identity
basepair
bp
non-bs
3bbv_z_3_z_71_C_G
CG
3BBV_Z_3_Z_71_C_G
3bbv
C
G
1
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0
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4
105.618382
3
1
1
1
1
1s72
0
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null
0
A
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null
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identity
basestacks
non-bp
bs
1s72_0_2080_0_2081_G_A
AG
1S72_0_2080_0_2081_G_A
1s72
G
A
1
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3.306413
1
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0
0
1
1
1
1s72
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null
0
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412
null
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identity
basestacks
non-bp
bs
1s72_0_410_0_412_A_C
AC
1S72_0_410_0_412_A_C
1s72
A
C
1
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0
null
0
0
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1
1
1q96
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11
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identity
non-interacting
non-bp
non-bs
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UU
1Q96_A_11_B_11_U_U
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null
0
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1
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identity
basepair
bp
non-bs
3dis_A_85_A_108_G_A
AG
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1
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1
1
1
1
1
1q96
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identity
non-interacting
non-bp
non-bs
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CG
1Q96_A_6_B_16_C_G
1q96
C
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1
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null
0
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0
1
1
1s72
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identity
non-interacting
non-bp
non-bs
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AU
1S72_0_11_0_527_A_U
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1
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6vyx
A
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identity
non-interacting
non-bp
non-bs
6vyx_A_4_A_66_G_C
CG
6VYX_A_4_A_66_G_C
6vyx
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null
0
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1
1
1s72
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identity
basepair
bp
non-bs
1s72_0_471_0_775_G_G
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1S72_0_471_0_775_G_G
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null
0
0
0
1
1
1s72
0
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0
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null
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identity
basepair
bp
non-bs
1s72_0_1682_0_1683_A_G
AG
1S72_0_1682_0_1683_A_G
1s72
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null
0
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0
1
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identity
basepair
bp
non-bs
1s72_0_409_0_410_U_A
AU
1S72_0_409_0_410_U_A
1s72
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0
25.138509
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null
0
0
0
1
1
1s72
0
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null
0
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737
null
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identity
basepair
bp
non-bs
1s72_0_734_0_737_U_A
AU
1S72_0_734_0_737_U_A
1s72
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1
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26.024271
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0
null
0
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0
1
1
3dll
X
A
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null
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identity
non-interacting
non-bp
non-bs
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AA
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3dll
A
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1
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null
0
0
0
1
1
4kze
R
A
13
null
R
G
80
null
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identity
non-interacting
non-bp
non-bs
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AG
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A
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1
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null
0
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0
1
1
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U
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null
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71
null
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identity
basestacks
non-bp
bs
1s72_9_70_9_71_U_C
CU
1S72_9_70_9_71_U_C
1s72
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104.920903
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1
1
1
1
1s72
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identity
basepair
bp
non-bs
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1
1
1
1
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identity
basestacks
non-bp
bs
1s72_0_1317_0_1318_A_A
AA
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null
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1
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null
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identity
non-interacting
non-bp
non-bs
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CG
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6cao
G
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1
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34.953559
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null
0
0
0
1
1
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null
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identity
basepair
bp
non-bs
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1S72_9_87_9_88_U_G
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null
0
0
0
1
1
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null
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identity
non-interacting
non-bp
non-bs
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AA
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null
0
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0
1
1
1s72
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identity
basestacks
non-bp
bs
1s72_0_624_0_625_U_U
UU
1S72_0_624_0_625_U_U
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12.391548
3.415504
1
96.785971
1
1
1
1
1
1s72
0
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null
0
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2,424
null
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identity
basestacks
non-bp
bs
1s72_0_2363_0_2424_G_U
GU
1S72_0_2363_0_2424_G_U
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null
0
0
0
1
1
3f30
X
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null
X
A
107
null
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identity
non-interacting
non-bp
non-bs
3f30_X_4_X_107_U_A
AU
3F30_X_4_X_107_U_A
3f30
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1
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18.073114
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null
0
0
0
1
1
1s72
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null
0
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null
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identity
basestacks
non-bp
bs
1s72_0_1720_0_1721_C_C
CC
1S72_0_1720_0_1721_C_C
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1
13.481057
5.943526
3.380783
0
13.481057
3.884916
0
null
0
0
0
1
1
6fec
A
U
5
null
A
G
23
null
15.0013
identity
non-interacting
non-bp
non-bs
6fec_A_5_A_23_U_G
GU
6FEC_A_5_A_23_U_G
6fec
U
G
1
50.643045
18.307333
13.526253
0
50.643045
15.055667
0
null
0
0
0
1
1
1yyk
F
A
18
null
F
U
19
null
3.3464
identity
basestacks
non-bp
bs
1yyk_F_18_F_19_A_U
AU
1YYK_F_18_F_19_A_U
1yyk
A
U
1
9.633111
5.571269
3.635531
1.51751
9.633111
3.346363
1
87.549
0
0
1
1
1
3dis
A
A
6
null
A
C
166
null
9.0139
identity
non-interacting
non-bp
non-bs
3dis_A_6_A_166_A_C
AC
3DIS_A_6_A_166_A_C
3dis
A
C
1
38.202543
17.923648
7.054817
0
38.202543
10.17423
0
null
0
0
0
1
1
1s72
0
G
1,364
null
0
C
1,365
null
3.2
identity
basestacks
non-bp
bs
1s72_0_1364_0_1365_G_C
CG
1S72_0_1364_0_1365_G_C
1s72
G
C
1
6.646295
5.353387
3.444414
2.171367
6.646295
3.200001
2
102.700351
1
1
1
1
1
3dll
X
G
201
null
X
G
421
null
6.2293
identity
basepair
bp
non-bs
3dll_X_201_X_421_G_G
GG
3DLL_X_201_X_421_G_G
3dll
G
G
1
24.735305
11.327179
2.742264
0
24.735305
6.229284
0
null
0
0
0
1
1
6xxa
A
C
5
null
A
C
20
null
11.2726
identity
non-interacting
non-bp
non-bs
6xxa_A_5_A_20_C_C
CC
6XXA_A_5_A_20_C_C
6xxa
C
C
1
8.188264
11.801271
11.346155
0.00107
8.188264
11.293923
0
null
0
0
0
1
1
1s72
0
G
2,092
null
0
G
2,093
null
2.7535
identity
basepair
bp
non-bs
1s72_0_2092_0_2093_G_G
GG
1S72_0_2092_0_2093_G_G
1s72
G
G
1
11.009537
7.433692
0.608206
0
11.009537
2.753447
1
146.966624
1
1
1
1
1
1s72
0
G
77
null
0
C
101
null
3.3819
identity
basestacks
non-bp
bs
1s72_0_77_0_101_G_C
CG
1S72_0_77_0_101_G_C
1s72
G
C
1
4.486444
7.246002
3.385698
0
4.486444
3.532267
0
null
0
0
0
1
1
4v8d
BA
C
654
G
BA
C
654
I
6.2456
identity
basepair
bp
non-bs
4v8d_BA_654_BA_654_C_C
CC
4V8D_BA_654_BA_654_C_C
4v8d
C
C
1
0
0
0
4.864139
0
2.288614
2
30.934166
0
0
1
1
1
1s72
0
A
750
null
0
U
751
null
3.0639
identity
basestacks
non-bp
bs
1s72_0_750_0_751_A_U
AU
1S72_0_750_0_751_A_U
1s72
A
U
1
11.927414
5.718306
3.342026
0.211222
11.927414
3.110028
2
107.885702
1
1
1
1
1
1q96
A
G
14
null
B
U
13
null
19.8875
identity
non-interacting
non-bp
non-bs
1q96_A_14_B_13_G_U
GU
1Q96_A_14_B_13_G_U
1q96
G
U
1
12.208195
23.754502
7.312185
0
12.208195
19.887503
0
null
0
0
0
1
1
3dll
X
C
553
null
X
U
554
null
10.1554
identity
basepair
bp
non-bs
3dll_X_553_X_554_C_U
CU
3DLL_X_553_X_554_C_U
3dll
C
U
1
53.984831
7.855701
3.538528
0
53.984831
11.955266
0
null
0
0
0
1
1
4v6o
AA
A
892
null
AA
A
906
null
2.965
identity
basepair
bp
non-bs
4v6o_AA_892_AA_906_A_A
AA
4V6O_AA_892_AA_906_A_A
4v6o
A
A
1
40.107719
9.101989
2.197165
0
40.107719
2.96495
1
124.742579
1
1
1
1
1
2qwy
B
A
41
null
B
G
42
null
3.5693
identity
basepair
bp
non-bs
2qwy_B_41_B_42_A_G
AG
2QWY_B_41_B_42_A_G
2qwy
A
G
1
35.517296
5.588188
3.631961
0
35.517296
5.350135
0
null
0
0
0
1
1
1c04
F
A
9
null
F
C
22
null
4.1035
identity
basepair
bp
non-bs
1c04_F_9_F_22_A_C
AC
1C04_F_9_F_22_A_C
1c04
A
C
1
12.552918
13.05829
0.648076
0
12.552918
4.103514
0
null
0
0
0
1
1
1q96
A
G
3
null
A
U
4
null
3.237
identity
basestacks
non-bp
bs
1q96_A_3_A_4_G_U
GU
1Q96_A_3_A_4_G_U
1q96
G
U
1
8.463513
5.432891
3.460854
1.46991
8.463513
3.710561
0
null
0
0
0
1
1
1s72
0
G
394
null
0
G
417
null
3.1023
identity
basepair
bp
non-bs
1s72_0_394_0_417_G_G
GG
1S72_0_394_0_417_G_G
1s72
G
G
1
45.856488
8.677409
1.160708
0
45.856488
3.102289
1
114.050426
1
1
1
1
1
1s72
0
G
1,898
null
0
C
1,899
null
3.3317
identity
basestacks
non-bp
bs
1s72_0_1898_0_1899_G_C
CG
1S72_0_1898_0_1899_G_C
1s72
G
C
1
10.900167
5.362474
3.466842
2.613593
10.900167
3.41479
2
101.105664
1
1
1
1
1
1q2r
E
C
27
null
E
C
44
null
3.7224
identity
basestacks
non-bp
bs
1q2r_E_27_E_44_C_C
CC
1Q2R_E_27_E_44_C_C
1q2r
C
C
1
7.201227
7.79414
3.359326
0
7.201227
4.977974
0
null
0
0
0
1
1
1s72
0
G
33
null
0
C
451
null
3.1712
identity
basestacks
non-bp
bs
1s72_0_33_0_451_G_C
CG
1S72_0_33_0_451_G_C
1s72
G
C
1
10.115914
7.699711
3.230319
0
10.115914
3.171235
2
111.788481
1
1
1
1
1
3dis
A
C
100
null
A
G
101
null
3.2805
identity
basestacks
non-bp
bs
3dis_A_100_A_101_C_G
CG
3DIS_A_100_A_101_C_G
3dis
C
G
1
5.785494
5.379117
3.255164
0.269601
5.785494
3.280487
1
114.326726
1
1
1
1
1
1s72
0
C
842
null
0
A
1,693
null
3.3716
identity
basestacks
non-bp
bs
1s72_0_842_0_1693_C_A
AC
1S72_0_842_0_1693_C_A
1s72
C
A
1
16.086614
5.008158
3.601796
3.675625
16.086614
4.065726
0
null
0
0
0
1
1
2bcz
C
G
21
null
D
U
41
null
3.1866
identity
basestacks
non-bp
bs
2bcz_C_21_D_41_G_U
GU
2BCZ_C_21_D_41_G_U
2bcz
G
U
1
10.238869
8.249947
3.283806
0.718491
10.238869
3.463995
1
106.411146
1
1
1
1
1
1s72
0
C
2,835
null
0
U
2,853
null
7.1916
identity
basepair
bp
non-bs
1s72_0_2835_0_2853_C_U
CU
1S72_0_2835_0_2853_C_U
1s72
C
U
1
35.190929
5.425269
2.843179
0
35.190929
9.670464
0
null
0
0
0
1
1
1c04
E
G
9
null
E
C
29
null
2.8596
identity
basepair
bp
non-bs
1c04_E_9_E_29_G_C
CG
1C04_E_9_E_29_G_C
1c04
G
C
1
11.773069
10.813021
0.334445
0
11.773069
2.859606
3
125.746005
3
1
1
1
1
5wyj
3A
G
17
null
SA
C
13
null
5.155
identity
non-interacting
non-bp
non-bs
5wyj_3A_17_SA_13_G_C
CG
5WYJ_3A_17_SA_13_G_C
5wyj
G
C
1
4.202861
13.47682
3.743414
0
4.202861
5.155063
0
null
0
0
0
1
1
1s72
0
G
458
null
0
A
463
null
2.9137
identity
basepair
bp
non-bs
1s72_0_458_0_463_G_A
AG
1S72_0_458_0_463_G_A
1s72
G
A
1
21.591788
8.281379
1.48397
0
21.591788
2.913733
1
115.608645
1
1
1
1
1
6gzk
A
A
3
null
A
C
7
null
10.5028
identity
non-interacting
non-bp
non-bs
6gzk_A_3_A_7_A_C
AC
6GZK_A_3_A_7_A_C
6gzk
A
C
1
47.370729
16.359607
9.599915
0
47.370729
10.545754
0
null
0
0
0
1
1
3dll
X
G
27
null
X
G
522
null
3.1742
identity
basepair
bp
non-bs
3dll_X_27_X_522_G_G
GG
3DLL_X_27_X_522_G_G
3dll
G
G
1
17.999516
7.532431
3.432715
0
17.999516
3.174159
1
94.592174
1
1
1
1
1
3dll
X
C
307
null
X
C
308
null
3.0981
identity
basestacks
non-bp
bs
3dll_X_307_X_308_C_C
CC
3DLL_X_307_X_308_C_C
3dll
C
C
1
35.477339
6.015174
2.66029
0
35.477339
4.067145
0
null
0
0
0
1
1
4v6o
AA
G
38
null
AA
G
39
null
3.4958
identity
basepair
bp
non-bs
4v6o_AA_38_AA_39_G_G
GG
4V6O_AA_38_AA_39_G_G
4v6o
G
G
1
46.987085
6.234439
0.198368
0
46.987085
3.495786
1
111.925914
1
1
1
1
1
1s72
0
C
1,085
null
0
A
1,086
null
3.2655
identity
basestacks
non-bp
bs
1s72_0_1085_0_1086_C_A
AC
1S72_0_1085_0_1086_C_A
1s72
C
A
1
10.953979
5.102776
3.343819
2.40767
10.953979
3.265468
1
116.030382
1
1
1
1
1
1s72
0
A
1,612
null
0
C
1,613
null
3.2595
identity
basestacks
non-bp
bs
1s72_0_1612_0_1613_A_C
AC
1S72_0_1612_0_1613_A_C
1s72
A
C
1
13.239557
5.299303
3.523686
3.020377
13.239557
3.437188
1
71.102032
0
0
1
1
1
6gzk
A
U
8
null
A
U
32
null
18.9417
identity
non-interacting
non-bp
non-bs
6gzk_A_8_A_32_U_U
UU
6GZK_A_8_A_32_U_U
6gzk
U
U
1
79.912078
19.776488
15.159911
0
79.912078
20.162004
0
null
0
0
0
1
1
1s72
0
A
961
null
0
C
1,010
null
3.2034
identity
basestacks
non-bp
bs
1s72_0_961_0_1010_A_C
AC
1S72_0_961_0_1010_A_C
1s72
A
C
1
4.086071
4.09284
3.297153
2.288902
4.086071
3.423501
1
89.728773
0
0
1
1
1
1s72
0
U
1,741
null
0
A
2,039
null
3.1783
identity
basestacks
non-bp
bs
1s72_0_1741_0_2039_U_A
AU
1S72_0_1741_0_2039_U_A
1s72
U
A
1
11.043369
7.816184
2.952886
0
11.043369
3.311165
1
77.553236
0
0
1
1
1
5gao
V
U
94
null
V
U
148
null
12.1102
identity
non-interacting
non-bp
non-bs
5gao_V_94_V_148_U_U
UU
5GAO_V_94_V_148_U_U
5gao
U
U
1
58.894489
13.448701
11.641404
1.583951
58.894489
14.000886
0
null
0
0
0
1
1
1c04
E
G
43
null
E
U
44
null
3.1091
identity
basestacks
non-bp
bs
1c04_E_43_E_44_G_U
GU
1C04_E_43_E_44_G_U
1c04
G
U
1
17.11257
6.019298
3.083072
0.146855
17.11257
3.855775
0
null
0
0
0
1
1
1s72
0
G
237
null
0
U
434
null
3.2967
identity
basestacks
non-bp
bs
1s72_0_237_0_434_G_U
GU
1S72_0_237_0_434_G_U
1s72
G
U
1
7.946215
7.793662
3.42949
0
7.946215
3.429325
1
73.007546
0
0
1
1
1
1s72
0
A
1,476
null
0
A
1,866
null
3.2222
identity
basestacks
non-bp
bs
1s72_0_1476_0_1866_A_A
AA
1S72_0_1476_0_1866_A_A
1s72
A
A
1
20.462554
6.943461
3.372269
0
20.462554
4.774372
0
null
0
0
0
1
1
1s72
0
G
1,706
null
0
A
1,712
null
2.7823
identity
basepair
bp
non-bs
1s72_0_1706_0_1712_G_A
AG
1S72_0_1706_0_1712_G_A
1s72
G
A
1
4.127316
9.481892
0.103207
0
4.127316
2.782324
2
144.597164
2
1
1
1
1
4v6o
BB
U
847
null
BB
U
934
null
3.074
identity
basestacks
non-bp
bs
4v6o_BB_847_BB_934_U_U
UU
4V6O_BB_847_BB_934_U_U
4v6o
U
U
1
14.264953
7.001963
2.967126
0
14.264953
3.623308
0
null
0
0
0
1
1
3dis
A
G
9
null
A
G
158
null
20.0079
identity
non-interacting
non-bp
non-bs
3dis_A_9_A_158_G_G
GG
3DIS_A_9_A_158_G_G
3dis
G
G
1
52.469223
30.133951
5.668325
0
52.469223
20.007911
0
null
0
0
0
1
1
1s72
0
U
1,062
null
0
G
1,063
null
3.7488
identity
basestacks
non-bp
bs
1s72_0_1062_0_1063_U_G
GU
1S72_0_1062_0_1063_U_G
1s72
U
G
1
12.571189
5.937231
3.104972
0
12.571189
3.766176
0
null
0
0
0
1
1
1s72
0
G
237
null
0
C
238
null
3.036
identity
basestacks
non-bp
bs
1s72_0_237_0_238_G_C
CG
1S72_0_237_0_238_G_C
1s72
G
C
1
14.475079
5.232557
3.403904
1.254547
14.475079
3.262484
3
126.226705
2
1
1
1
1
1s72
0
U
1,422
null
0
G
1,443
null
3.1576
identity
basestacks
non-bp
bs
1s72_0_1422_0_1443_U_G
GU
1S72_0_1422_0_1443_U_G
1s72
U
G
1
6.616439
8.19108
3.406901
0
6.616439
3.278609
1
95.902383
1
1
1
1
1
1s72
0
G
1,660
null
0
A
1,661
null
3.4582
identity
basestacks
non-bp
bs
1s72_0_1660_0_1661_G_A
AG
1S72_0_1660_0_1661_G_A
1s72
G
A
1
3.600134
5.626808
3.380034
0.853108
3.600134
3.56647
0
null
0
0
0
1
1
1s72
0
A
60
null
0
A
86
null
2.9384
identity
basepair
bp
non-bs
1s72_0_60_0_86_A_A
AA
1S72_0_60_0_86_A_A
1s72
A
A
1
21.421928
13.55662
0.262976
0
21.421928
2.938416
2
112.192145
2
1
1
1
1
1s72
0
C
685
null
0
C
748
null
6.355
identity
basepair
bp
non-bs
1s72_0_685_0_748_C_C
CC
1S72_0_685_0_748_C_C
1s72
C
C
1
44.926435
7.04515
0.439518
0
44.926435
10.144133
0
null
0
0
0
1
1
4v6o
BB
U
2,783
null
BB
U
2,784
null
3.6971
identity
basestacks
non-bp
bs
4v6o_BB_2783_BB_2784_U_U
UU
4V6O_BB_2783_BB_2784_U_U
4v6o
U
U
1
26.102167
5.577421
4.037994
2.098497
26.102167
4.968118
0
null
0
0
0
1
1
1s72
0
G
304
null
0
C
348
null
3.3897
identity
basepair
bp
non-bs
1s72_0_304_0_348_G_C
CG
1S72_0_304_0_348_G_C
1s72
G
C
1
10.653748
8.697432
2.90602
0
10.653748
3.693238
0
null
0
0
0
1
1
1s72
0
A
692
null
0
A
693
null
3.0825
identity
basestacks
non-bp
bs
1s72_0_692_0_693_A_A
AA
1S72_0_692_0_693_A_A
1s72
A
A
1
17.243648
5.336389
3.508277
2.493998
17.243648
3.082523
1
116.603996
1
1
1
1
1