pdb_id
string
chain1
string
res_name1
string
res_seq_num1
int64
ins_code1
string
chain2
string
res_name2
string
res_seq_num2
int64
ins_code2
string
min_distance
float64
symmetry_op
string
label_final
string
label_bp
string
label_bs
string
filename
string
pair_type
string
pair_id
string
pdb_key
string
base1_type
string
base2_type
string
geometry_ok_01
float64
base_plane_angle_deg
float64
c1p_c1p_distance_A
float64
stack_interplane_distance_A
float64
stack_overlap_area_A2
float64
stack_parallel_plane_angle_deg
float64
hbond_min_da_dist
float64
hbond_num_da_lt_3p5
float64
hbond_max_angle_for_da_lt_3p5
float64
hbond_num_full
float64
hbond_pattern_present_01
float64
hbond_angle_defined_01
float64
coords_found_01
int64
core_feature_found_01
int64
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X
C
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C
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null
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identity
basepair
bp
non-bs
3dll_X_1009_X_1169_C_C
CC
3DLL_X_1009_X_1169_C_C
3dll
C
C
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0
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null
0
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1
1
4v6o
BA
C
38
null
BA
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48
null
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identity
basepair
bp
non-bs
4v6o_BA_38_BA_48_C_U
CU
4V6O_BA_38_BA_48_C_U
4v6o
C
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null
0
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0
1
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null
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identity
non-interacting
non-bp
non-bs
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CU
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null
0
0
0
1
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C
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null
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identity
non-interacting
non-bp
non-bs
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CG
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C
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null
0
0
0
1
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4ji7
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non-interacting
non-bp
non-bs
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null
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0
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1
1
1s72
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identity
basestacks
non-bp
bs
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non-interacting
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non-bs
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null
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1
1yyk
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null
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identity
basestacks
non-bp
bs
1yyk_C_8_D_18_U_A
AU
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1
1
1
1
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basepair
bp
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1
1
1
1
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non-interacting
non-bp
non-bs
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AU
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null
0
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1
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identity
non-interacting
non-bp
non-bs
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UU
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null
0
0
0
1
1
3dis
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C
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172
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identity
basestacks
non-bp
bs
3dis_A_4_A_172_C_G
CG
3DIS_A_4_A_172_C_G
3dis
C
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86.057844
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1
1
3dll
X
C
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identity
basestacks
non-bp
bs
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C
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1s72
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identity
basepair
bp
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identity
basepair
bp
non-bs
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identity
basestacks
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bs
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identity
basepair
bp
non-bs
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CG
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identity
basestacks
non-bp
bs
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identity
basestacks
non-bp
bs
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identity
non-interacting
non-bp
non-bs
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null
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1s72
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null
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identity
basestacks
non-bp
bs
1s72_0_573_0_585_A_C
AC
1S72_0_573_0_585_A_C
1s72
A
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1
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null
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1
1
3dll
X
C
878
null
X
C
880
null
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identity
basepair
bp
non-bs
3dll_X_878_X_880_C_C
CC
3DLL_X_878_X_880_C_C
3dll
C
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1
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null
0
0
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1
1
4v8d
BA
C
654
Q
BA
C
654
R
2.8882
identity
basepair
bp
non-bs
4v8d_BA_654_BA_654_C_C
CC
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C
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1
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null
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identity
basestacks
non-bp
bs
1s72_0_2864_0_2865_U_G
GU
1S72_0_2864_0_2865_U_G
1s72
U
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1
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1
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1
1
1
1
1
1s72
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null
0
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null
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identity
basepair
bp
non-bs
1s72_0_930_0_1041_C_U
CU
1S72_0_930_0_1041_C_U
1s72
C
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1
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null
0
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1
1
1s72
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434
null
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identity
basepair
bp
non-bs
1s72_0_191_0_434_A_U
AU
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1s72
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2
1
1
1
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null
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identity
basepair
bp
non-bs
4v6o_BB_593_BB_665_U_U
UU
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4v6o
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identity
basepair
bp
non-bs
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AU
1S72_0_1978_0_2008_A_U
1s72
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null
0
0
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1
1
1s72
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0
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null
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identity
basepair
bp
non-bs
1s72_0_1456_0_1489_C_G
CG
1S72_0_1456_0_1489_C_G
1s72
C
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1
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3
121.488752
3
1
1
1
1
1s72
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null
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identity
basepair
bp
non-bs
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1s72
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1
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1
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1
1
1
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A
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identity
non-interacting
non-bp
non-bs
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AG
3FO4_A_27_A_76_G_A
3fo4
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null
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1
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1s72
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null
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identity
basestacks
non-bp
bs
1s72_0_238_0_239_C_C
CC
1S72_0_238_0_239_C_C
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C
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null
0
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1
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1s72
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identity
basestacks
non-bp
bs
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1
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identity
non-interacting
non-bp
non-bs
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GU
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null
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identity
basestacks
non-bp
bs
1s72_0_2386_0_2387_U_U
UU
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null
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1
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1s72
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identity
basepair
bp
non-bs
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null
0
0
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1
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1s72
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identity
basepair
bp
non-bs
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AU
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1
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1
1
1
1
1s72
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null
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null
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identity
basestacks
non-bp
bs
1s72_0_555_0_556_U_C
CU
1S72_0_555_0_556_U_C
1s72
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1
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1
1
1
1
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X
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X
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null
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identity
basepair
bp
non-bs
3dll_X_697_X_788_G_G
GG
3DLL_X_697_X_788_G_G
3dll
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1
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1
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1s72
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null
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identity
basestacks
non-bp
bs
1s72_0_542_0_615_A_G
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0
1
1
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null
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identity
basestacks
non-bp
bs
1s72_0_954_0_2302_U_A
AU
1S72_0_954_0_2302_U_A
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1
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1
1
1
1
1
1s72
0
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null
0
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2,247
null
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identity
basestacks
non-bp
bs
1s72_0_1857_0_2247_A_C
AC
1S72_0_1857_0_2247_A_C
1s72
A
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1
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null
0
0
0
1
1
3dll
X
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null
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null
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identity
basestacks
non-bp
bs
3dll_X_1591_X_1592_U_U
UU
3DLL_X_1591_X_1592_U_U
3dll
U
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1
15.69727
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3.728307
0
null
0
0
0
1
1
3dll
X
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2,056
null
X
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2,416
null
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identity
basepair
bp
non-bs
3dll_X_2056_X_2416_C_U
CU
3DLL_X_2056_X_2416_C_U
3dll
C
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1
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null
0
0
0
1
1
1s72
0
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1,283
null
0
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1,284
null
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identity
basestacks
non-bp
bs
1s72_0_1283_0_1284_G_G
GG
1S72_0_1283_0_1284_G_G
1s72
G
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1
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0
null
0
0
0
1
1
6fec
A
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3
null
A
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1,161
null
22.3924
identity
non-interacting
non-bp
non-bs
6fec_A_3_A_1161_C_G
CG
6FEC_A_3_A_1161_C_G
6fec
C
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1
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85.47993
25.366631
0
null
0
0
0
1
1
1mfj
A
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7
null
A
C
18
null
6.2536
identity
non-interacting
non-bp
non-bs
1mfj_A_7_A_18_C_C
CC
1MFJ_A_7_A_18_C_C
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null
0
0
0
1
1
1s72
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null
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null
2.6319
identity
basepair
bp
non-bs
1s72_0_2735_0_2744_U_G
GU
1S72_0_2735_0_2744_U_G
1s72
U
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1
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0.373513
0
8.165645
2.631876
2
122.699771
2
1
1
1
1
1s72
0
G
2,279
null
0
A
2,463
null
3.215
identity
basestacks
non-bp
bs
1s72_0_2279_0_2463_G_A
AG
1S72_0_2279_0_2463_G_A
1s72
G
A
1
8.201457
6.850222
3.503984
4.306252
8.201457
3.610214
0
null
0
0
0
1
1
6t34
b
U
4
null
c
U
4
null
20.4176
identity
non-interacting
non-bp
non-bs
6t34_b_4_c_4_U_U
UU
6T34_B_4_C_4_U_U
6t34
U
U
1
40.772156
23.245535
9.767242
0
40.772156
21.811552
0
null
0
0
0
1
1
1s72
0
G
41
null
0
A
442
null
3.3976
identity
basestacks
non-bp
bs
1s72_0_41_0_442_G_A
AG
1S72_0_41_0_442_G_A
1s72
G
A
1
15.26007
8.22632
3.18634
0
15.26007
3.474357
1
81.127788
0
0
1
1
1
1s72
0
G
537
null
0
A
2,060
null
3.2149
identity
basestacks
non-bp
bs
1s72_0_537_0_2060_G_A
AG
1S72_0_537_0_2060_G_A
1s72
G
A
1
15.067484
6.911868
3.224667
0
15.067484
3.428242
1
96.494122
1
1
1
1
1
2qwy
A
G
25
null
A
U
40
null
3.1247
identity
basestacks
non-bp
bs
2qwy_A_25_A_40_G_U
GU
2QWY_A_25_A_40_G_U
2qwy
G
U
1
10.890895
7.020513
3.28373
0
10.890895
3.425652
1
100.279894
1
1
1
1
1
6zsg
XA
C
1,677
null
XA
A
1,775
null
13.8426
identity
non-interacting
non-bp
non-bs
6zsg_XA_1677_XA_1775_C_A
AC
6ZSG_XA_1677_XA_1775_C_A
6zsg
C
A
1
17.077084
16.093356
13.600555
0
17.077084
14.446385
0
null
0
0
0
1
1
3dll
X
C
1,451
null
X
C
1,572
null
3.5142
identity
basepair
bp
non-bs
3dll_X_1451_X_1572_C_C
CC
3DLL_X_1451_X_1572_C_C
3dll
C
C
1
8.288897
7.973731
2.545953
0
8.288897
3.737043
0
null
0
0
0
1
1
1s72
0
A
1,118
null
0
U
1,120
null
3.4024
identity
basestacks
non-bp
bs
1s72_0_1118_0_1120_A_U
AU
1S72_0_1118_0_1120_A_U
1s72
A
U
1
1.1196
3.993548
3.403334
2.346209
1.1196
3.402432
2
94.753319
1
1
1
1
1
1s72
0
A
660
null
0
G
745
null
5.2237
identity
basepair
bp
non-bs
1s72_0_660_0_745_A_G
AG
1S72_0_660_0_745_A_G
1s72
A
G
1
48.019083
7.2325
2.885734
0
48.019083
7.23697
0
null
0
0
0
1
1
1s72
0
C
2,575
null
0
A
2,576
null
3.0546
identity
basestacks
non-bp
bs
1s72_0_2575_0_2576_C_A
AC
1S72_0_2575_0_2576_C_A
1s72
C
A
1
12.706493
5.047966
3.39459
2.641823
12.706493
3.166001
1
116.260667
1
1
1
1
1
1c04
E
G
21
null
E
C
50
null
2.7225
identity
basepair
bp
non-bs
1c04_E_21_E_50_G_C
CG
1C04_E_21_E_50_G_C
1c04
G
C
1
4.907828
14.126366
0.505444
0
4.907828
2.722488
1
165.786984
1
1
1
1
1
1s72
0
G
1,072
null
0
A
1,073
null
5.0248
identity
basestacks
non-bp
bs
1s72_0_1072_0_1073_G_A
AG
1S72_0_1072_0_1073_G_A
1s72
G
A
1
53.756319
6.124676
3.853234
0
53.756319
5.560521
0
null
0
0
0
1
1
1c04
F
A
21
null
F
C
22
null
2.9054
identity
basestacks
non-bp
bs
1c04_F_21_F_22_A_C
AC
1C04_F_21_F_22_A_C
1c04
A
C
1
18.993286
5.834123
2.921369
0
18.993286
3.432079
1
73.929029
0
0
1
1
1
1s72
0
C
838
null
0
C
839
null
3.3185
identity
basestacks
non-bp
bs
1s72_0_838_0_839_C_C
CC
1S72_0_838_0_839_C_C
1s72
C
C
1
13.467133
5.289728
3.573816
2.711363
13.467133
3.318521
1
86.200351
0
0
1
1
1
1s72
0
A
620
null
0
G
634
null
3.3988
identity
basepair
bp
non-bs
1s72_0_620_0_634_A_G
AG
1S72_0_620_0_634_A_G
1s72
A
G
1
24.403939
13.827902
2.559631
0
24.403939
3.398815
1
138.978111
1
1
1
1
1
6cao
A
G
7
null
A
G
629
null
23.3882
identity
non-interacting
non-bp
non-bs
6cao_A_7_A_629_G_G
GG
6CAO_A_7_A_629_G_G
6cao
G
G
1
78.061037
27.355762
12.968218
0
78.061037
23.592434
0
null
0
0
0
1
1
1s72
0
U
481
null
0
G
482
null
3.1296
identity
basestacks
non-bp
bs
1s72_0_481_0_482_U_G
GU
1S72_0_481_0_482_U_G
1s72
U
G
1
13.658442
5.296994
3.412947
1.740094
13.658442
3.657911
0
null
0
0
0
1
1
1s72
0
G
386
null
0
C
403
null
2.7933
identity
basepair
bp
non-bs
1s72_0_386_0_403_G_C
CG
1S72_0_386_0_403_G_C
1s72
G
C
1
16.313913
10.640645
0.409444
0
16.313913
2.79326
3
126.003873
3
1
1
1
1
1s72
0
A
407
null
0
A
429
null
3.3583
identity
basepair
bp
non-bs
1s72_0_407_0_429_A_A
AA
1S72_0_407_0_429_A_A
1s72
A
A
1
53.9924
14.231128
0.7962
0
53.9924
3.358352
1
138.624729
1
1
1
1
1
5gao
V
C
95
null
V
U
134
null
9.9837
identity
non-interacting
non-bp
non-bs
5gao_V_95_V_134_C_U
CU
5GAO_V_95_V_134_C_U
5gao
C
U
1
59.628008
17.805212
4.657124
0
59.628008
9.983742
0
null
0
0
0
1
1
6vyx
A
C
3
null
a
C
2,420
null
19.8517
identity
non-interacting
non-bp
non-bs
6vyx_A_3_a_2420_C_C
CC
6VYX_A_3_A_2420_C_C
6vyx
C
C
1
64.335794
22.331818
8.703751
0
64.335794
20.201002
0
null
0
0
0
1
1
7jt3
3
A
2
null
3
A
3
null
3.389
identity
non-interacting
non-bp
non-bs
7jt3_3_2_3_3_A_A
AA
7JT3_3_2_3_3_A_A
7jt3
A
A
1
25.104132
5.625085
4.179601
2.377859
25.104132
3.38896
1
86.353042
0
0
1
1
1
1s72
0
C
1,578
null
0
G
1,619
null
3.0508
identity
basestacks
non-bp
bs
1s72_0_1578_0_1619_C_G
CG
1S72_0_1578_0_1619_C_G
1s72
C
G
1
4.441682
7.66614
3.121049
0
4.441682
3.256133
3
108.005571
1
1
1
1
1
1s72
0
A
1,573
null
0
C
1,574
null
3.1569
identity
basestacks
non-bp
bs
1s72_0_1573_0_1574_A_C
AC
1S72_0_1573_0_1574_A_C
1s72
A
C
1
27.841322
5.025185
3.230633
0.047728
27.841322
3.423455
1
90.385068
1
1
1
1
1
3dll
X
C
4
null
X
G
2,610
null
16.6501
identity
non-interacting
non-bp
non-bs
3dll_X_4_X_2610_C_G
CG
3DLL_X_4_X_2610_C_G
3dll
C
G
1
28.685429
22.007154
10.051721
0
28.685429
18.324447
0
null
0
0
0
1
1
3bbv
z
C
48
null
z
U
59
null
3.5858
identity
basestacks
non-bp
bs
3bbv_z_48_z_59_C_U
CU
3BBV_Z_48_Z_59_C_U
3bbv
C
U
1
8.226144
5.429669
3.6299
0
8.226144
5.445126
0
null
0
0
0
1
1
2qwy
A
C
2
null
A
U
38
null
17.7997
identity
non-interacting
non-bp
non-bs
2qwy_A_2_A_38_C_U
CU
2QWY_A_2_A_38_C_U
2qwy
C
U
1
58.531054
22.296684
15.032518
0
58.531054
17.799744
0
null
0
0
0
1
1
3fo4
A
U
51
null
A
U
75
null
4.1538
identity
basepair
bp
non-bs
3fo4_A_51_A_75_U_U
UU
3FO4_A_51_A_75_U_U
3fo4
U
U
1
15.893075
5.463463
2.522513
0
15.893075
4.317417
0
null
0
0
0
1
1
3dll
X
G
2,302
null
X
G
2,310
null
3.0614
identity
basepair
bp
non-bs
3dll_X_2302_X_2310_G_G
GG
3DLL_X_2302_X_2310_G_G
3dll
G
G
1
21.851429
13.271044
2.229045
0
21.851429
3.884565
0
null
0
0
0
1
1
6t34
m
U
3
null
m
U
4
null
5.1644
identity
non-interacting
non-bp
non-bs
6t34_m_3_m_4_U_U
UU
6T34_M_3_M_4_U_U
6t34
U
U
1
87.677794
7.730132
4.544817
0
87.677794
7.689498
0
null
0
0
0
1
1
5zei
A
U
20
null
B
G
26
null
9.8258
identity
non-interacting
non-bp
non-bs
5zei_A_20_B_26_U_G
GU
5ZEI_A_20_B_26_U_G
5zei
U
G
1
13.553408
17.042051
9.101814
0
13.553408
10.592523
0
null
0
0
0
1
1
1s72
0
U
1,185
null
0
C
1,186
null
3.2159
identity
basestacks
non-bp
bs
1s72_0_1185_0_1186_U_C
CU
1S72_0_1185_0_1186_U_C
1s72
U
C
1
9.539207
5.149369
3.448578
1.196469
9.539207
3.215916
2
102.186856
2
1
1
1
1
1s72
0
G
142
null
0
C
143
null
3.3624
identity
basestacks
non-bp
bs
1s72_0_142_0_143_G_C
CG
1S72_0_142_0_143_G_C
1s72
G
C
1
4.892718
5.862637
3.510374
0.302758
4.892718
3.415089
3
106.319125
2
1
1
1
1
1s72
0
A
1,515
null
0
C
1,516
null
3.3753
identity
basestacks
non-bp
bs
1s72_0_1515_0_1516_A_C
AC
1S72_0_1515_0_1516_A_C
1s72
A
C
1
6.100384
5.145186
3.469891
1.012585
6.100384
3.934303
0
null
0
0
0
1
1
4v6o
BB
U
1,411
null
BB
U
1,412
null
3.0257
identity
basestacks
non-bp
bs
4v6o_BB_1411_BB_1412_U_U
UU
4V6O_BB_1411_BB_1412_U_U
4v6o
U
U
1
15.319813
5.295175
3.348817
0.313933
15.319813
3.733415
0
null
0
0
0
1
1
7jt3
3
G
6
null
3
A
26
null
18.2569
identity
non-interacting
non-bp
non-bs
7jt3_3_6_3_26_G_A
AG
7JT3_3_6_3_26_G_A
7jt3
G
A
1
8.096093
21.336806
10.500111
0
8.096093
20.376388
0
null
0
0
0
1
1
5iem
A
C
13
null
A
C
41
null
5.2045
identity
non-interacting
non-bp
non-bs
5iem_A_13_A_41_C_C
CC
5IEM_A_13_A_41_C_C
5iem
C
C
1
27.12151
12.28696
1.825161
0
27.12151
5.319538
0
null
0
0
0
1
1
5xyi
2
A
1
null
2
C
906
null
8.4439
identity
non-interacting
non-bp
non-bs
5xyi_2_1_2_906_A_C
AC
5XYI_2_1_2_906_A_C
5xyi
A
C
1
29.244573
12.758407
1.02313
0
29.244573
10.625002
0
null
0
0
0
1
1
1s72
9
A
44
null
9
A
45
null
3.1536
identity
basestacks
non-bp
bs
1s72_9_44_9_45_A_A
AA
1S72_9_44_9_45_A_A
1s72
A
A
1
9.121901
5.289598
3.278724
2.627285
9.121901
3.308948
1
111.361487
1
1
1
1
1
2bcz
A
C
3
null
D
U
46
null
16.0361
identity
non-interacting
non-bp
non-bs
2bcz_A_3_D_46_C_U
CU
2BCZ_A_3_D_46_C_U
2bcz
C
U
1
45.400762
21.288205
6.250856
0
45.400762
17.79927
0
null
0
0
0
1
1
4v6o
BB
U
1,390
null
BB
U
1,394
null
3.1536
identity
basestacks
non-bp
bs
4v6o_BB_1390_BB_1394_U_U
UU
4V6O_BB_1390_BB_1394_U_U
4v6o
U
U
1
15.404109
10.043177
3.179409
0
15.404109
3.315258
1
74.735652
0
0
1
1
1
1s72
0
G
1,048
null
0
U
1,066
null
2.7328
identity
basepair
bp
non-bs
1s72_0_1048_0_1066_G_U
GU
1S72_0_1048_0_1066_G_U
1s72
G
U
1
15.762569
10.449376
0.229848
0
15.762569
2.73283
2
119.580842
2
1
1
1
1
1s72
0
A
1,487
null
0
G
1,697
null
2.9414
identity
basepair
bp
non-bs
1s72_0_1487_0_1697_A_G
AG
1S72_0_1487_0_1697_A_G
1s72
A
G
1
36.613725
8.027372
2.329744
0
36.613725
2.941348
1
108.891642
1
1
1
1
1
4a36
R
G
18
null
U
G
18
null
11.775
identity
non-interacting
non-bp
non-bs
4a36_R_18_U_18_G_G
GG
4A36_R_18_U_18_G_G
4a36
G
G
1
18.089872
21.512824
8.293793
0
18.089872
12.354377
0
null
0
0
0
1
1
1s72
0
U
967
null
0
G
1,002
null
3.1827
identity
basestacks
non-bp
bs
1s72_0_967_0_1002_U_G
GU
1S72_0_967_0_1002_U_G
1s72
U
G
1
7.806922
4.754629
3.32572
3.1139
7.806922
3.354696
1
105.872731
1
1
1
1
1
1s72
0
C
799
null
0
U
815
null
3.1727
identity
basepair
bp
non-bs
1s72_0_799_0_815_C_U
CU
1S72_0_799_0_815_C_U
1s72
C
U
1
12.342809
7.269682
2.515816
0
12.342809
4.221242
0
null
0
0
0
1
1
2bcz
A
C
2
null
A
U
7
null
15.7999
identity
non-interacting
non-bp
non-bs
2bcz_A_2_A_7_C_U
CU
2BCZ_A_2_A_7_C_U
2bcz
C
U
1
57.461265
23.964387
11.365889
0
57.461265
15.799876
0
null
0
0
0
1
1
1s72
0
A
1,106
null
0
C
1,257
null
3.6772
identity
basepair
bp
non-bs
1s72_0_1106_0_1257_A_C
AC
1S72_0_1106_0_1257_A_C
1s72
A
C
1
26.485058
5.703498
1.904714
0
26.485058
6.517424
0
null
0
0
0
1
1
1s72
0
A
2,300
null
0
A
2,307
null
2.8396
identity
basepair
bp
non-bs
1s72_0_2300_0_2307_A_A
AA
1S72_0_2300_0_2307_A_A
1s72
A
A
1
30.947611
10.796161
0.671698
0
30.947611
2.839614
2
130.741375
2
1
1
1
1
1s72
9
C
27
null
9
U
28
null
3.2395
identity
basestacks
non-bp
bs
1s72_9_27_9_28_C_U
CU
1S72_9_27_9_28_C_U
1s72
C
U
1
6.104728
5.013241
3.425151
1.011902
6.104728
3.293147
1
106.533614
1
1
1
1
1
4ji3
A
G
7
null
A
G
9
null
11.695
identity
non-interacting
non-bp
non-bs
4ji3_A_7_A_9_G_G
GG
4JI3_A_7_A_9_G_G
4ji3
G
G
1
56.343143
12.133093
4.394368
0
56.343143
11.968144
0
null
0
0
0
1
1
5lr4
C
U
7
null
C
C
10
null
10.894
identity
non-interacting
non-bp
non-bs
5lr4_C_7_C_10_U_C
CU
5LR4_C_7_C_10_U_C
5lr4
U
C
1
18.912629
15.390017
10.510044
0
18.912629
10.906719
0
null
0
0
0
1
1