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chr1 2365048 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 4 4 amygdala;cerebellum;dentate gyrus;inferior occipital gyrus
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chr1 2365080 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 80 46 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;anterior hypothalamus;caudate nucleus;cerebellum;claustrum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;preoptic area;putamen;septum;spinal cord dorsal;spinal cord ventral;straight gyrus;subiculum;substantia nigra;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
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chr1 2365095 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 18 13 anterior hypothalamus;cerebellum;cuneus;geniculate nucleus;insular cortex;lateral occipitotemporal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;putamen;superior frontal gyrus;superior parietal lobule;superior temporal gyrus
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chr1 2365096 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 26 21 amygdala;annectant gyrus;anterior cingulate gyrus;cerebellum;cuneus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;occipital gyrus;orbital gyrus;pons;posterior parahippocampal gyrus;precentral gyrus;putamen;spinal cord dorsal;subiculum;substantia nigra;thalamus
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chr1 2365116 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 17 16 inferior frontal gyrus;inferior temporal gyrus;midbrain;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior parahippocampal gyrus;precentral gyrus;preoptic area;straight gyrus;superior colliculus;superior frontal gyrus
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chr1 2365117 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 14 14 amygdala;anterior cingulate gyrus;anterior hypothalamus;cerebellum;globus pallidus;inferior temporal gyrus;middle frontal gyrus;middle temporal gyrus;orbital gyrus;postcentral gyrus;precentral gyrus;straight gyrus;superior frontal gyrus;thalamus
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chr1 2365122 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 3 2 cerebellum;spinal cord dorsal
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chr1 2365144 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 12 11 annectant gyrus;anterior cingulate gyrus;caudate nucleus;cerebellum;entorhinal cortex;geniculate nucleus;lateral occipitotemporal gyrus;midbrain;middle frontal gyrus;occipital gyrus;preoptic area
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chr1 2365146 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 2 2 occipital gyrus;precentral gyrus
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chr1 2365252 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 11 10 amygdala;claustrum;insular cortex;middle frontal gyrus;posterior hypothalamus;precentral gyrus;preoptic area;putamen;spinal cord dorsal;supramarginal gyrus
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chr1 2365266 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 19 17 annectant gyrus;cerebellum;claustrum;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;midbrain;middle temporal gyrus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;straight gyrus;superior colliculus
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chr1 2365307 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 38 30 amygdala;caudate nucleus;cerebellum;claustrum;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;precentral gyrus;preoptic area;putamen;spinal cord dorsal;straight gyrus;subiculum;substantia nigra;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
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chr1 2365326 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 4 4 angular gyrus;geniculate nucleus;postcentral gyrus;superior temporal gyrus
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chr1 2365330 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 5 5 angular gyrus;cerebellum;dentate gyrus;pons;substantia nigra
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chr1 2365331 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 29 26 anterior hypothalamus;cerebellum;cuneus;entorhinal cortex;geniculate nucleus;inferior occipital gyrus;inferior temporal gyrus;lateral occipitotemporal gyrus;medulla;middle temporal gyrus;occipital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hypothalamus;precentral gyrus;preoptic area;putamen;septum;spinal cord dorsal;spinal cord ventral;straight gyrus;subiculum;superior frontal gyrus;superior temporal gyrus;thalamus
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chr1 2365344 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 39 31 anterior cingulate gyrus;anterior hippocampus;anterior hypothalamus;caudate nucleus;cerebellum;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;preoptic area;putamen;septum;spinal cord dorsal;spinal cord ventral;straight gyrus;subiculum;substantia nigra;superior parietal lobule;superior temporal gyrus;thalamus
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chr1 2365356 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 51 38 amygdala;anterior cingulate gyrus;caudate nucleus;cerebellum;claustrum;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;preoptic area;putamen;septum;spinal cord dorsal;straight gyrus;subiculum;substantia nigra;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
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chr1 2365366 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 68 44 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;caudate nucleus;cerebellum;claustrum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;spinal cord dorsal;spinal cord ventral;straight gyrus;subiculum;substantia nigra;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
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chr1 2365368 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 37 27 amygdala;anterior cingulate gyrus;anterior hippocampus;caudate nucleus;cerebellum;cuneus;entorhinal cortex;geniculate nucleus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior parahippocampal gyrus;precentral gyrus;putamen;spinal cord dorsal;spinal cord ventral;straight gyrus;subiculum;substantia nigra;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
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chr1 2365376 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 15 14 amygdala;caudate nucleus;cerebellum;globus pallidus;insular cortex;lateral occipitotemporal gyrus;middle temporal gyrus;postcentral gyrus;precentral gyrus;putamen;septum;subiculum;substantia nigra;superior frontal gyrus
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chr1 2365429 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 3 3 amygdala;spinal cord dorsal;thalamus
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chr1 2365441 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 55 39 amygdala;annectant gyrus;anterior hippocampus;caudate nucleus;cerebellum;claustrum;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior temporal gyrus;lateral occipitotemporal gyrus;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;preoptic area;putamen;septum;spinal cord dorsal;spinal cord ventral;straight gyrus;subiculum;substantia nigra;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
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chr1 2365478 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 2 2 annectant gyrus;occipital gyrus
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chr1 2365489 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 2 2 inferior frontal gyrus;spinal cord dorsal
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chr1 2365501 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 12 12 amygdala;angular gyrus;anterior cingulate gyrus;caudate nucleus;inferior frontal gyrus;middle temporal gyrus;occipital gyrus;posterior cingulate gyrus;spinal cord dorsal;subiculum;superior colliculus;superior temporal gyrus
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chr1 2365509 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 10 10 annectant gyrus;anterior cingulate gyrus;cerebellum;inferior frontal gyrus;medulla;middle temporal gyrus;preoptic area;spinal cord dorsal;spinal cord ventral;superior temporal gyrus
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chr1 2366531 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 2 2 postcentral gyrus;spinal cord dorsal
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chr1 2366594 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 2 2 inferior temporal gyrus;posterior hippocampus
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chr1 2367563 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 4 4 annectant gyrus;middle frontal gyrus;pons;spinal cord dorsal
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chr1 2367710 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 3 2 caudate nucleus;inferior frontal gyrus
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chr1 2367992 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 6 6 angular gyrus;anterior cingulate gyrus;caudate nucleus;cerebellum;globus pallidus;medulla
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chr1 2368041 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 2 2 geniculate nucleus;medulla
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chr1 2368073 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 21 21 amygdala;anterior hypothalamus;claustrum;cuneus;geniculate nucleus;globus pallidus;lateral occipitotemporal gyrus;medulla;pons;postcentral gyrus;posterior hippocampus;posterior hypothalamus;precentral gyrus;putamen;septum;straight gyrus;subiculum;substantia nigra;superior parietal lobule;superior temporal gyrus;thalamus
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chr1 2368136 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 10 10 anterior hypothalamus;entorhinal cortex;midbrain;posterior cingulate gyrus;posterior parahippocampal gyrus;precentral gyrus;substantia nigra;superior colliculus;superior frontal gyrus;superior parietal lobule
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chr1 2368802 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 8 8 annectant gyrus;globus pallidus;medulla;orbital gyrus;postcentral gyrus;spinal cord dorsal;straight gyrus;superior temporal gyrus
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chr1 2368882 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 6 6 anterior hypothalamus;middle frontal gyrus;middle temporal gyrus;posterior hypothalamus;putamen;septum
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chr1 2368934 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 17 14 annectant gyrus;caudate nucleus;cerebellum;dentate gyrus;globus pallidus;inferior temporal gyrus;lateral occipitotemporal gyrus;medulla;middle frontal gyrus;postcentral gyrus;posterior parahippocampal gyrus;precentral gyrus;spinal cord dorsal;supramarginal gyrus
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chr1 2368944 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 10 9 annectant gyrus;dentate gyrus;globus pallidus;lateral occipitotemporal gyrus;medulla;middle frontal gyrus;postcentral gyrus;precentral gyrus;spinal cord dorsal
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chr1 2368956 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 4 4 anterior cingulate gyrus;cerebellum;medulla;middle frontal gyrus
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chr1 2369456 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 2 2 geniculate nucleus;supramarginal gyrus
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chr1 2376843 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 33 33 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;caudate nucleus;claustrum;entorhinal cortex;geniculate nucleus;globus pallidus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;precentral gyrus;putamen;spinal cord dorsal;straight gyrus;subiculum;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus
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chr1 2376875 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 7 6 cerebellum;claustrum;precentral gyrus;septum;straight gyrus;thalamus
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chr1 2376910 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 2 2 middle temporal gyrus;posterior cingulate gyrus
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chr1 2376911 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 3 3 claustrum;posterior hippocampus;putamen
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chr1 2376915 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 17 15 amygdala;anterior cingulate gyrus;anterior hippocampus;anterior hypothalamus;caudate nucleus;cerebellum;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;posterior hippocampus;posterior hypothalamus;precentral gyrus;putamen;subiculum;thalamus
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chr1 2376944 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 16 16 amygdala;anterior cingulate gyrus;anterior hippocampus;caudate nucleus;dentate gyrus;entorhinal cortex;insular cortex;orbital gyrus;posterior hypothalamus;posterior parahippocampal gyrus;spinal cord dorsal;substantia nigra;superior frontal gyrus;superior parietal lobule;supramarginal gyrus;thalamus
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chr1 2376945 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 4 4 lateral occipitotemporal gyrus;substantia nigra;supramarginal gyrus;thalamus
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chr1 2376950 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 6 6 cerebellum;cuneus;globus pallidus;lateral occipitotemporal gyrus;straight gyrus;substantia nigra
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chr1 2377000 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 4 4 dentate gyrus;globus pallidus;spinal cord dorsal;superior temporal gyrus
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chr1 2377002 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 26 21 amygdala;annectant gyrus;caudate nucleus;cerebellum;claustrum;geniculate nucleus;globus pallidus;inferior temporal gyrus;medulla;middle frontal gyrus;middle temporal gyrus;pons;posterior parahippocampal gyrus;precentral gyrus;preoptic area;septum;spinal cord dorsal;straight gyrus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus
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chr1 2377019 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 79 46 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;anterior hypothalamus;caudate nucleus;cerebellum;claustrum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;preoptic area;putamen;septum;spinal cord dorsal;spinal cord ventral;straight gyrus;subiculum;substantia nigra;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
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chr1 2377059 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 70 44 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hypothalamus;caudate nucleus;cerebellum;claustrum;cuneus;dentate gyrus;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;preoptic area;putamen;septum;spinal cord dorsal;spinal cord ventral;straight gyrus;subiculum;substantia nigra;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
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chr1 2377078 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 11 10 amygdala;globus pallidus;inferior occipital gyrus;inferior temporal gyrus;lateral occipitotemporal gyrus;occipital gyrus;orbital gyrus;putamen;spinal cord ventral;substantia nigra
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chr1 2377331 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 9 9 caudate nucleus;dentate gyrus;geniculate nucleus;inferior frontal gyrus;orbital gyrus;septum;spinal cord dorsal;substantia nigra;superior parietal lobule
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chr1 2377374 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 39 30 amygdala;annectant gyrus;cerebellum;claustrum;cuneus;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;lateral occipitotemporal gyrus;medulla;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;spinal cord dorsal;spinal cord ventral;straight gyrus;substantia nigra;superior frontal gyrus;superior temporal gyrus;supramarginal gyrus
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chr1 2377375 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 2 2 annectant gyrus;medulla
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chr1 2377561 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 9 9 claustrum;geniculate nucleus;lateral occipitotemporal gyrus;posterior hippocampus;posterior hypothalamus;precentral gyrus;putamen;spinal cord dorsal;substantia nigra
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chr1 2377577 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 2 2 posterior hippocampus;substantia nigra
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chr1 2377583 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 4 3 cerebellum;postcentral gyrus;superior frontal gyrus
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chr1 2377608 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 45 37 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;anterior hypothalamus;caudate nucleus;cerebellum;claustrum;cuneus;dentate gyrus;entorhinal cortex;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;preoptic area;putamen;spinal cord dorsal;substantia nigra;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
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chr1 2377637 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 3 3 posterior parahippocampal gyrus;superior parietal lobule;superior temporal gyrus
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chr1 2377646 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 2 2 medulla;posterior cingulate gyrus
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chr1 2377647 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 3 3 cuneus;subiculum;thalamus
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chr1 2377649 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 57 40 amygdala;angular gyrus;annectant gyrus;anterior hippocampus;anterior hypothalamus;caudate nucleus;cerebellum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;straight gyrus;subiculum;substantia nigra;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
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chr1 2377686 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 7 7 anterior hypothalamus;dentate gyrus;geniculate nucleus;pons;septum;subiculum;supramarginal gyrus
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chr1 2380730 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 2 2 cerebellum;substantia nigra
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chr1 2380740 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 2 2 inferior temporal gyrus;spinal cord dorsal
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chr1 2383734 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 2 2 medulla;substantia nigra
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chr1 2383740 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 2 2 middle frontal gyrus;putamen
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chr1 2383758 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 3 3 straight gyrus;substantia nigra;superior temporal gyrus
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chr1 2383801 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 4 4 caudate nucleus;cerebellum;subiculum;thalamus
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chr1 2383847 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 2 2 geniculate nucleus;inferior frontal gyrus
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chr1 2383891 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 10 9 cerebellum;inferior occipital gyrus;middle frontal gyrus;occipital gyrus;precentral gyrus;spinal cord ventral;substantia nigra;superior temporal gyrus;thalamus
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chr1 2383916 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 46 34 amygdala;anterior hippocampus;cerebellum;cuneus;dentate gyrus;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;midbrain;middle frontal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior parahippocampal gyrus;precentral gyrus;preoptic area;putamen;septum;spinal cord dorsal;spinal cord ventral;straight gyrus;subiculum;substantia nigra;superior frontal gyrus;superior temporal gyrus;supramarginal gyrus;thalamus
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chr1 2383922 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 2 2 inferior frontal gyrus;superior temporal gyrus
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chr1 2391277 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 6 6 anterior cingulate gyrus;geniculate nucleus;lateral occipitotemporal gyrus;occipital gyrus;postcentral gyrus;superior parietal lobule
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chr1 2391352 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 9 9 anterior cingulate gyrus;claustrum;dentate gyrus;geniculate nucleus;inferior occipital gyrus;inferior temporal gyrus;lateral occipitotemporal gyrus;precentral gyrus;thalamus
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chr1 2392380 T C NONREP - ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 23 23 caudate nucleus;cerebellum;claustrum;cuneus;dentate gyrus;globus pallidus;inferior temporal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;precentral gyrus;preoptic area;septum;spinal cord dorsal;subiculum;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
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chr1 2396319 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 4 4 globus pallidus;medulla;putamen;septum
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chr1 2396331 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 2 2 dentate gyrus;globus pallidus
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chr1 2396375 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 5 5 annectant gyrus;caudate nucleus;inferior occipital gyrus;putamen;septum
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chr1 2396378 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 10 10 amygdala;annectant gyrus;anterior hippocampus;anterior hypothalamus;cuneus;inferior occipital gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;postcentral gyrus
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chr1 2396397 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 5 5 precentral gyrus;spinal cord dorsal;superior temporal gyrus;supramarginal gyrus;thalamus
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chr1 2396406 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 3 3 anterior hippocampus;cerebellum;substantia nigra
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chr1 2396711 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 8 8 amygdala;cerebellum;entorhinal cortex;geniculate nucleus;insular cortex;postcentral gyrus;septum;supramarginal gyrus
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chr1 2396713 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 9 9 amygdala;anterior hypothalamus;cerebellum;dentate gyrus;lateral occipitotemporal gyrus;middle frontal gyrus;postcentral gyrus;posterior cingulate gyrus;septum
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chr1 2396717 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 2 2 cerebellum;cuneus
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chr1 2396733 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 2 2 insular cortex;superior frontal gyrus
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chr1 2396769 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 2 2 anterior cingulate gyrus;posterior parahippocampal gyrus
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chr1 2396774 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 2 2 geniculate nucleus;posterior parahippocampal gyrus
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chr1 2396781 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 2 2 midbrain;postcentral gyrus
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chr1 2396786 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 29 27 amygdala;anterior cingulate gyrus;cerebellum;cuneus;dentate gyrus;entorhinal cortex;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;lateral occipitotemporal gyrus;medulla;midbrain;middle frontal gyrus;middle temporal gyrus;postcentral gyrus;posterior hippocampus;posterior parahippocampal gyrus;putamen;septum;spinal cord dorsal;straight gyrus;subiculum;substantia nigra;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
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chr1 2396807 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 2 2 amygdala;precentral gyrus
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chr1 2398180 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 3 3 insular cortex;posterior hippocampus;posterior hypothalamus
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chr1 2398202 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 23 20 amygdala;angular gyrus;anterior hypothalamus;cerebellum;claustrum;cuneus;dentate gyrus;inferior occipital gyrus;lateral occipitotemporal gyrus;postcentral gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;putamen;spinal cord dorsal;subiculum;substantia nigra;superior frontal gyrus;superior parietal lobule;thalamus
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chr1 2398248 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 2 2 precentral gyrus;thalamus
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chr1 2398334 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 13 11 angular gyrus;claustrum;cuneus;insular cortex;occipital gyrus;posterior parahippocampal gyrus;precentral gyrus;septum;substantia nigra;superior frontal gyrus;thalamus
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chr1 2398375 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 14 13 anterior hippocampus;cerebellum;claustrum;insular cortex;orbital gyrus;postcentral gyrus;precentral gyrus;putamen;spinal cord ventral;straight gyrus;superior frontal gyrus;superior temporal gyrus;thalamus
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chr1 2398433 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 13 12 amygdala;annectant gyrus;cerebellum;inferior occipital gyrus;postcentral gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;septum;straight gyrus;subiculum;substantia nigra
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chr1 2398522 A G ALU SINE/Alu ENSMFAG00000045763:AHCTF1 AHCTF1 Intronic - - 5 5 cerebellum;geniculate nucleus;middle temporal gyrus;pons;superior colliculus
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