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chr1 9946559 T C REP LTR/ERVL-MaLR - - Intergenic - - 4 4 anterior hypothalamus;occipital gyrus;orbital gyrus;postcentral gyrus
chr1 9946560 T C REP LTR/ERVL-MaLR - - Intergenic - - 3 3 cuneus;occipital gyrus;postcentral gyrus
chr1 9948530 T C ALU SINE/Alu - - Intergenic - - 4 4 middle frontal gyrus;posterior parahippocampal gyrus;precentral gyrus;superior frontal gyrus
chr1 9948557 T C ALU SINE/Alu - - Intergenic - - 4 4 entorhinal cortex;lateral occipitotemporal gyrus;postcentral gyrus;posterior parahippocampal gyrus
chr1 9948646 T C ALU SINE/Alu - - Intergenic - - 3 3 straight gyrus;subiculum;superior parietal lobule
chr1 9953604 T C NONREP - - - Intergenic - - 2 2 inferior temporal gyrus;pons
chr1 9955709 T C ALU SINE/Alu - - Intergenic - - 59 36 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;caudate nucleus;claustrum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;spinal cord dorsal;straight gyrus;subiculum;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 9955727 T C ALU SINE/Alu - - Intergenic - - 3 3 globus pallidus;inferior temporal gyrus;orbital gyrus
chr1 9955739 T C ALU SINE/Alu - - Intergenic - - 9 9 annectant gyrus;caudate nucleus;inferior frontal gyrus;inferior occipital gyrus;insular cortex;orbital gyrus;posterior parahippocampal gyrus;superior frontal gyrus;thalamus
chr1 9955747 T C ALU SINE/Alu - - Intergenic - - 68 37 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;caudate nucleus;claustrum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;spinal cord dorsal;straight gyrus;subiculum;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 9955752 T C ALU SINE/Alu - - Intergenic - - 69 40 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;caudate nucleus;claustrum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;straight gyrus;subiculum;substantia nigra;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 9955776 T C ALU SINE/Alu - - Intergenic - - 6 6 angular gyrus;anterior cingulate gyrus;middle temporal gyrus;postcentral gyrus;posterior hippocampus;putamen
chr1 9955777 T C ALU SINE/Alu - - Intergenic - - 24 19 amygdala;angular gyrus;anterior cingulate gyrus;anterior hippocampus;inferior frontal gyrus;inferior occipital gyrus;insular cortex;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;straight gyrus
chr1 9955780 T C ALU SINE/Alu - - Intergenic - - 45 32 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;claustrum;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;straight gyrus;subiculum;substantia nigra;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 9955820 T C ALU SINE/Alu - - Intergenic - - 59 35 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;caudate nucleus;claustrum;cuneus;dentate gyrus;entorhinal cortex;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;spinal cord dorsal;straight gyrus;subiculum;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 9955823 T C ALU SINE/Alu - - Intergenic - - 2 2 anterior cingulate gyrus;supramarginal gyrus
chr1 9955830 T C ALU SINE/Alu - - Intergenic - - 66 39 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;caudate nucleus;claustrum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;spinal cord dorsal;straight gyrus;subiculum;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 9955842 T C ALU SINE/Alu - - Intergenic - - 14 14 anterior cingulate gyrus;claustrum;inferior occipital gyrus;insular cortex;middle frontal gyrus;pons;precentral gyrus;septum;straight gyrus;subiculum;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 9955858 T C ALU SINE/Alu - - Intergenic - - 2 2 postcentral gyrus;posterior cingulate gyrus
chr1 9955859 T C ALU SINE/Alu - - Intergenic - - 51 33 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;claustrum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;straight gyrus;subiculum;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 9955860 T C ALU SINE/Alu - - Intergenic - - 3 3 lateral occipitotemporal gyrus;occipital gyrus;precentral gyrus
chr1 9955879 T C ALU SINE/Alu - - Intergenic - - 3 2 posterior cingulate gyrus;precentral gyrus
chr1 9955903 T C ALU SINE/Alu - - Intergenic - - 72 42 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;anterior hypothalamus;caudate nucleus;claustrum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;spinal cord dorsal;straight gyrus;subiculum;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 9955915 T C ALU SINE/Alu - - Intergenic - - 29 26 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;claustrum;cuneus;entorhinal cortex;geniculate nucleus;inferior frontal gyrus;inferior temporal gyrus;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;posterior hippocampus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;straight gyrus;subiculum;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 9956485 T C ALU SINE/Alu - - Intergenic - - 7 7 amygdala;claustrum;inferior frontal gyrus;lateral occipitotemporal gyrus;middle frontal gyrus;orbital gyrus;supramarginal gyrus
chr1 9956510 T C ALU SINE/Alu - - Intergenic - - 24 19 amygdala;anterior cingulate gyrus;cuneus;dentate gyrus;entorhinal cortex;inferior frontal gyrus;inferior occipital gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;precentral gyrus;putamen;septum;superior parietal lobule
chr1 9956530 T C ALU SINE/Alu - - Intergenic - - 3 3 caudate nucleus;insular cortex;postcentral gyrus
chr1 9956540 T C ALU SINE/Alu - - Intergenic - - 20 18 annectant gyrus;anterior cingulate gyrus;cuneus;entorhinal cortex;inferior frontal gyrus;inferior occipital gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;posterior parahippocampal gyrus;putamen;straight gyrus;subiculum;superior frontal gyrus;superior temporal gyrus
chr1 9956547 T C ALU SINE/Alu - - Intergenic - - 53 35 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;caudate nucleus;claustrum;cuneus;entorhinal cortex;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;straight gyrus;subiculum;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 9956551 T C ALU SINE/Alu - - Intergenic - - 36 28 amygdala;annectant gyrus;anterior cingulate gyrus;caudate nucleus;claustrum;cuneus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior parahippocampal gyrus;precentral gyrus;putamen;straight gyrus;subiculum;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 9956556 T C ALU SINE/Alu - - Intergenic - - 5 5 insular cortex;middle temporal gyrus;straight gyrus;superior temporal gyrus;supramarginal gyrus
chr1 9956557 T C ALU SINE/Alu - - Intergenic - - 5 5 inferior occipital gyrus;insular cortex;middle temporal gyrus;posterior parahippocampal gyrus;supramarginal gyrus
chr1 9956583 T C ALU SINE/Alu - - Intergenic - - 10 9 annectant gyrus;claustrum;inferior occipital gyrus;middle temporal gyrus;postcentral gyrus;posterior cingulate gyrus;precentral gyrus;superior parietal lobule;supramarginal gyrus
chr1 9956613 T C ALU SINE/Alu - - Intergenic - - 40 30 angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hypothalamus;claustrum;cuneus;dentate gyrus;geniculate nucleus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;straight gyrus;subiculum;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 9956614 T C ALU SINE/Alu - - Intergenic - - 2 2 inferior occipital gyrus;straight gyrus
chr1 9956633 T C ALU SINE/Alu - - Intergenic - - 10 10 annectant gyrus;claustrum;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;middle frontal gyrus;occipital gyrus;putamen;straight gyrus;superior temporal gyrus
chr1 9956638 T C ALU SINE/Alu - - Intergenic - - 4 4 middle frontal gyrus;precentral gyrus;superior parietal lobule;supramarginal gyrus
chr1 9956647 T C ALU SINE/Alu - - Intergenic - - 43 30 angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hypothalamus;caudate nucleus;claustrum;cuneus;dentate gyrus;entorhinal cortex;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior parahippocampal gyrus;precentral gyrus;putamen;straight gyrus;subiculum;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 9956669 T C ALU SINE/Alu - - Intergenic - - 8 8 claustrum;entorhinal cortex;middle temporal gyrus;precentral gyrus;putamen;subiculum;superior frontal gyrus;thalamus
chr1 9956670 T C ALU SINE/Alu - - Intergenic - - 2 2 middle temporal gyrus;precentral gyrus
chr1 9956671 T C ALU SINE/Alu - - Intergenic - - 10 10 amygdala;angular gyrus;caudate nucleus;middle temporal gyrus;postcentral gyrus;posterior cingulate gyrus;precentral gyrus;putamen;subiculum;supramarginal gyrus
chr1 9971078 T C REP LINE/L1 - - Intergenic - - 2 2 orbital gyrus;pons
chr1 9971227 T C REP LINE/L1 - - Intergenic - - 6 6 dentate gyrus;globus pallidus;middle temporal gyrus;pons;posterior cingulate gyrus;thalamus
chr1 9974377 T C REP Simple_repeat - - Intergenic - - 2 2 claustrum;lateral occipitotemporal gyrus
chr1 9974986 T C ALU SINE/Alu - - Intergenic - - 2 2 posterior parahippocampal gyrus;precentral gyrus
chr1 9975048 T C ALU SINE/Alu - - Intergenic - - 4 4 inferior frontal gyrus;occipital gyrus;postcentral gyrus;superior temporal gyrus
chr1 9975130 T C ALU SINE/Alu - - Intergenic - - 9 9 anterior cingulate gyrus;caudate nucleus;cuneus;middle temporal gyrus;orbital gyrus;posterior parahippocampal gyrus;substantia nigra;superior parietal lobule;superior temporal gyrus
chr1 9975140 T C ALU SINE/Alu - - Intergenic - - 5 4 anterior cingulate gyrus;precentral gyrus;straight gyrus;subiculum
chr1 9975143 T C ALU SINE/Alu - - Intergenic - - 39 31 angular gyrus;annectant gyrus;caudate nucleus;claustrum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior parahippocampal gyrus;precentral gyrus;putamen;spinal cord dorsal;straight gyrus;subiculum;superior frontal gyrus;superior parietal lobule;superior temporal gyrus
chr1 9975144 T C ALU SINE/Alu - - Intergenic - - 61 39 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hypothalamus;caudate nucleus;claustrum;cuneus;dentate gyrus;entorhinal cortex;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;spinal cord dorsal;straight gyrus;subiculum;substantia nigra;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 9975152 T C ALU SINE/Alu - - Intergenic - - 3 3 inferior occipital gyrus;precentral gyrus;superior frontal gyrus
chr1 9975157 T C ALU SINE/Alu - - Intergenic - - 14 14 caudate nucleus;cuneus;dentate gyrus;inferior occipital gyrus;inferior temporal gyrus;lateral occipitotemporal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;posterior parahippocampal gyrus;precentral gyrus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus
chr1 9975194 T C ALU SINE/Alu - - Intergenic - - 4 3 claustrum;pons;putamen
chr1 9975196 T C ALU SINE/Alu - - Intergenic - - 2 2 inferior temporal gyrus;postcentral gyrus
chr1 9975232 T C ALU SINE/Alu - - Intergenic - - 34 23 anterior cingulate gyrus;claustrum;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;postcentral gyrus;posterior cingulate gyrus;posterior parahippocampal gyrus;precentral gyrus;putamen;straight gyrus;subiculum;substantia nigra;superior frontal gyrus;superior parietal lobule;superior temporal gyrus
chr1 9975240 T C ALU SINE/Alu - - Intergenic - - 2 2 lateral occipitotemporal gyrus;putamen
chr1 9975299 T C ALU SINE/Alu - - Intergenic - - 4 4 claustrum;middle temporal gyrus;putamen;superior colliculus
chr1 9975303 T C ALU SINE/Alu - - Intergenic - - 39 30 angular gyrus;annectant gyrus;anterior cingulate gyrus;caudate nucleus;claustrum;cuneus;dentate gyrus;entorhinal cortex;inferior frontal gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;orbital gyrus;pons;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;straight gyrus;subiculum;substantia nigra;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;thalamus
chr1 9975319 T C ALU SINE/Alu - - Intergenic - - 26 20 caudate nucleus;claustrum;entorhinal cortex;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle temporal gyrus;orbital gyrus;pons;posterior cingulate gyrus;precentral gyrus;putamen;septum;straight gyrus;subiculum;superior colliculus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 9975331 T C ALU SINE/Alu - - Intergenic - - 2 2 claustrum;subiculum
chr1 9975421 T C ALU SINE/Alu - - Intergenic - - 19 15 amygdala;angular gyrus;geniculate nucleus;inferior occipital gyrus;insular cortex;middle frontal gyrus;occipital gyrus;posterior cingulate gyrus;precentral gyrus;putamen;straight gyrus;subiculum;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 9975554 T C REP LINE/L2 - - Intergenic - - 27 23 anterior hippocampus;claustrum;entorhinal cortex;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior hypothalamus;precentral gyrus;putamen;septum;straight gyrus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 9976647 T C ALU SINE/Alu - - Intergenic - - 10 9 caudate nucleus;claustrum;inferior frontal gyrus;inferior occipital gyrus;middle frontal gyrus;middle temporal gyrus;spinal cord dorsal;superior frontal gyrus;superior parietal lobule
chr1 9976657 T C ALU SINE/Alu - - Intergenic - - 29 24 amygdala;anterior cingulate gyrus;cuneus;dentate gyrus;geniculate nucleus;inferior frontal gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior parahippocampal gyrus;putamen;septum;spinal cord dorsal;straight gyrus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus
chr1 9976662 T C ALU SINE/Alu - - Intergenic - - 2 2 posterior cingulate gyrus;precentral gyrus
chr1 9976667 T C ALU SINE/Alu - - Intergenic - - 2 2 orbital gyrus;postcentral gyrus
chr1 9976680 T C ALU SINE/Alu - - Intergenic - - 11 11 anterior cingulate gyrus;caudate nucleus;claustrum;entorhinal cortex;insular cortex;lateral occipitotemporal gyrus;occipital gyrus;posterior parahippocampal gyrus;putamen;superior frontal gyrus;superior temporal gyrus
chr1 9976691 T C ALU SINE/Alu - - Intergenic - - 8 8 claustrum;insular cortex;lateral occipitotemporal gyrus;orbital gyrus;posterior parahippocampal gyrus;precentral gyrus;straight gyrus;superior temporal gyrus
chr1 9976719 T C ALU SINE/Alu - - Intergenic - - 3 3 lateral occipitotemporal gyrus;occipital gyrus;posterior parahippocampal gyrus
chr1 9976732 T C ALU SINE/Alu - - Intergenic - - 18 17 amygdala;angular gyrus;anterior cingulate gyrus;entorhinal cortex;inferior frontal gyrus;lateral occipitotemporal gyrus;middle frontal gyrus;occipital gyrus;postcentral gyrus;posterior parahippocampal gyrus;precentral gyrus;putamen;straight gyrus;subiculum;superior frontal gyrus;superior parietal lobule;supramarginal gyrus
chr1 9976733 T C ALU SINE/Alu - - Intergenic - - 7 6 lateral occipitotemporal gyrus;middle frontal gyrus;orbital gyrus;precentral gyrus;putamen;superior temporal gyrus
chr1 9976854 T C ALU SINE/Alu - - Intergenic - - 3 3 claustrum;postcentral gyrus;putamen
chr1 9977533 T C NONREP - - - Intergenic - - 4 4 insular cortex;pons;straight gyrus;thalamus
chr1 9978057 T C ALU SINE/Alu - - Intergenic - - 3 3 inferior temporal gyrus;middle temporal gyrus;precentral gyrus
chr1 9980617 T C ALU SINE/Alu - - Intergenic - - 3 3 middle frontal gyrus;straight gyrus;thalamus
chr1 9980712 T C ALU SINE/Alu - - Intergenic - - 64 39 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;anterior hypothalamus;caudate nucleus;claustrum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;spinal cord dorsal;straight gyrus;subiculum;substantia nigra;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 9980729 T C ALU SINE/Alu - - Intergenic - - 4 4 insular cortex;middle frontal gyrus;postcentral gyrus;straight gyrus
chr1 9980762 T C ALU SINE/Alu - - Intergenic - - 74 43 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;anterior hypothalamus;caudate nucleus;claustrum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;preoptic area;putamen;septum;spinal cord dorsal;straight gyrus;subiculum;substantia nigra;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 9981422 T C ALU SINE/Alu - - Intergenic - - 5 5 cuneus;middle frontal gyrus;pons;spinal cord dorsal;superior parietal lobule
chr1 9981424 T C ALU SINE/Alu - - Intergenic - - 2 2 pons;thalamus
chr1 9981439 T C ALU SINE/Alu - - Intergenic - - 49 35 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;caudate nucleus;claustrum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;lateral occipitotemporal gyrus;medulla;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;precentral gyrus;spinal cord ventral;straight gyrus;subiculum;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 9981463 T C ALU SINE/Alu - - Intergenic - - 20 17 annectant gyrus;anterior cingulate gyrus;caudate nucleus;entorhinal cortex;globus pallidus;inferior frontal gyrus;inferior temporal gyrus;lateral occipitotemporal gyrus;middle frontal gyrus;postcentral gyrus;posterior cingulate gyrus;precentral gyrus;subiculum;substantia nigra;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 9981470 T C ALU SINE/Alu - - Intergenic - - 22 18 annectant gyrus;anterior cingulate gyrus;cuneus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior parahippocampal gyrus;subiculum;superior parietal lobule;superior temporal gyrus
chr1 9981489 T C ALU SINE/Alu - - Intergenic - - 75 42 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hypothalamus;caudate nucleus;claustrum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;preoptic area;putamen;septum;spinal cord dorsal;straight gyrus;subiculum;substantia nigra;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
chr1 9981538 T C ALU SINE/Alu - - Intergenic - - 18 15 anterior cingulate gyrus;anterior hippocampus;inferior frontal gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;pons;posterior cingulate gyrus;straight gyrus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
chr1 9986037 T C REP DNA/TcMar-Tigger - - Intergenic - - 4 4 dentate gyrus;geniculate nucleus;putamen;thalamus
chr1 9986248 T C REP DNA/TcMar-Tigger - - Intergenic - - 4 4 middle temporal gyrus;septum;straight gyrus;superior temporal gyrus
chr1 9986699 T C ALU SINE/Alu - - Intergenic - - 5 5 anterior cingulate gyrus;entorhinal cortex;inferior frontal gyrus;postcentral gyrus;subiculum
chr1 9986700 T C ALU SINE/Alu - - Intergenic - - 4 4 anterior cingulate gyrus;insular cortex;middle frontal gyrus;subiculum
chr1 9986714 T C ALU SINE/Alu - - Intergenic - - 6 6 annectant gyrus;inferior frontal gyrus;precentral gyrus;putamen;septum;subiculum
chr1 9986724 T C ALU SINE/Alu - - Intergenic - - 6 6 annectant gyrus;cuneus;posterior cingulate gyrus;spinal cord dorsal;subiculum;superior parietal lobule
chr1 9986788 T C ALU SINE/Alu - - Intergenic - - 2 2 caudate nucleus;superior frontal gyrus
chr1 9986795 T C ALU SINE/Alu - - Intergenic - - 2 2 claustrum;superior temporal gyrus
chr1 9986874 T C ALU SINE/Alu - - Intergenic - - 8 8 claustrum;entorhinal cortex;orbital gyrus;postcentral gyrus;putamen;superior frontal gyrus;superior parietal lobule;supramarginal gyrus
chr1 9986898 T C ALU SINE/Alu - - Intergenic - - 2 2 inferior frontal gyrus;lateral occipitotemporal gyrus
chr1 9989426 T C ALU SINE/Alu - - Intergenic - - 2 2 inferior temporal gyrus;posterior cingulate gyrus
chr1 9989582 T C ALU SINE/Alu - - Intergenic - - 2 2 claustrum;superior temporal gyrus
chr1 9993131 T C REP LINE/L1 - - Intergenic - - 31 29 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;caudate nucleus;claustrum;cuneus;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;subiculum;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus
chr1 9993185 T C REP LINE/L1 - - Intergenic - - 2 2 inferior temporal gyrus;posterior parahippocampal gyrus
chr1 9993343 T C REP LINE/L1 - - Intergenic - - 3 3 globus pallidus;septum;thalamus