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chr1 6220956 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 4 4 amygdala;straight gyrus;substantia nigra;superior temporal gyrus
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chr1 6220965 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 5 5 dentate gyrus;globus pallidus;inferior occipital gyrus;middle temporal gyrus;straight gyrus
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chr1 6220975 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 3 3 dentate gyrus;lateral occipitotemporal gyrus;superior parietal lobule
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chr1 6221035 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 5 5 lateral occipitotemporal gyrus;pons;postcentral gyrus;septum;superior parietal lobule
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chr1 6221078 T C NONREP - ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 2 2 claustrum;dentate gyrus
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chr1 6223025 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 9 8 annectant gyrus;entorhinal cortex;geniculate nucleus;lateral occipitotemporal gyrus;middle temporal gyrus;posterior hypothalamus;spinal cord dorsal;supramarginal gyrus
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chr1 6223037 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 6 6 annectant gyrus;geniculate nucleus;lateral occipitotemporal gyrus;midbrain;spinal cord dorsal;substantia nigra
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chr1 6223064 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 29 24 amygdala;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;lateral occipitotemporal gyrus;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior hippocampus;posterior parahippocampal gyrus;preoptic area;putamen;septum;spinal cord dorsal;spinal cord ventral;subiculum;substantia nigra;thalamus
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chr1 6223119 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 27 24 angular gyrus;anterior cingulate gyrus;anterior hypothalamus;caudate nucleus;claustrum;cuneus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;midbrain;middle temporal gyrus;orbital gyrus;postcentral gyrus;posterior hypothalamus;putamen;septum;spinal cord dorsal;spinal cord ventral;straight gyrus;substantia nigra;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
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chr1 6223160 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 31 26 amygdala;anterior cingulate gyrus;anterior hippocampus;caudate nucleus;claustrum;dentate gyrus;entorhinal cortex;inferior temporal gyrus;lateral occipitotemporal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;posterior hypothalamus;posterior parahippocampal gyrus;preoptic area;putamen;septum;spinal cord dorsal;subiculum;substantia nigra;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
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chr1 6223170 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 29 24 amygdala;anterior cingulate gyrus;anterior hippocampus;caudate nucleus;claustrum;cuneus;entorhinal cortex;globus pallidus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;orbital gyrus;postcentral gyrus;posterior hypothalamus;posterior parahippocampal gyrus;preoptic area;spinal cord dorsal;straight gyrus;subiculum;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;thalamus
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chr1 6223173 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 9 9 inferior temporal gyrus;lateral occipitotemporal gyrus;middle frontal gyrus;precentral gyrus;putamen;septum;superior parietal lobule;superior temporal gyrus;thalamus
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chr1 6223174 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 33 27 amygdala;angular gyrus;anterior cingulate gyrus;caudate nucleus;cerebellum;claustrum;cuneus;dentate gyrus;inferior frontal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;posterior hippocampus;posterior parahippocampal gyrus;precentral gyrus;septum;spinal cord dorsal;straight gyrus;subiculum;substantia nigra;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;thalamus
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chr1 6223182 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 7 6 amygdala;middle temporal gyrus;occipital gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
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chr1 6223195 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 9 7 insular cortex;lateral occipitotemporal gyrus;middle temporal gyrus;orbital gyrus;posterior cingulate gyrus;precentral gyrus;supramarginal gyrus
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chr1 6223196 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 17 16 amygdala;caudate nucleus;cerebellum;claustrum;entorhinal cortex;geniculate nucleus;inferior temporal gyrus;middle temporal gyrus;orbital gyrus;posterior hippocampus;precentral gyrus;putamen;septum;spinal cord ventral;superior colliculus;superior temporal gyrus
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chr1 6223199 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 12 12 caudate nucleus;claustrum;inferior temporal gyrus;midbrain;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;preoptic area;spinal cord dorsal;superior colliculus;thalamus
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chr1 6223200 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 2 2 midbrain;occipital gyrus
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chr1 6223240 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 20 16 anterior hypothalamus;caudate nucleus;cuneus;lateral occipitotemporal gyrus;midbrain;occipital gyrus;pons;posterior hippocampus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;spinal cord dorsal;superior frontal gyrus;superior temporal gyrus;supramarginal gyrus
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chr1 6223255 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 48 33 amygdala;annectant gyrus;anterior cingulate gyrus;anterior hypothalamus;caudate nucleus;cerebellum;claustrum;cuneus;dentate gyrus;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;septum;spinal cord dorsal;straight gyrus;subiculum;substantia nigra;superior frontal gyrus;superior temporal gyrus;supramarginal gyrus;thalamus
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chr1 6223276 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 3 3 septum;spinal cord dorsal;superior parietal lobule
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chr1 6223314 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 4 4 amygdala;middle frontal gyrus;precentral gyrus;spinal cord dorsal
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chr1 6223318 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 3 3 septum;spinal cord dorsal;straight gyrus
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chr1 6223332 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 36 31 amygdala;anterior cingulate gyrus;caudate nucleus;claustrum;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;middle frontal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior hippocampus;posterior hypothalamus;precentral gyrus;putamen;septum;spinal cord dorsal;straight gyrus;subiculum;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
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chr1 6223333 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 13 12 caudate nucleus;claustrum;inferior frontal gyrus;inferior temporal gyrus;lateral occipitotemporal gyrus;medulla;orbital gyrus;pons;posterior hippocampus;precentral gyrus;superior parietal lobule;thalamus
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chr1 6223360 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 2 2 geniculate nucleus;orbital gyrus
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chr1 6223386 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 3 3 amygdala;posterior hypothalamus;superior temporal gyrus
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chr1 6223395 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 9 8 angular gyrus;middle temporal gyrus;orbital gyrus;posterior hypothalamus;precentral gyrus;spinal cord dorsal;straight gyrus;superior frontal gyrus
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chr1 6223410 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 5 5 amygdala;insular cortex;orbital gyrus;pons;spinal cord dorsal
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chr1 6223412 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 10 8 amygdala;caudate nucleus;claustrum;dentate gyrus;posterior parahippocampal gyrus;putamen;spinal cord dorsal;subiculum
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chr1 6223415 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 53 38 amygdala;anterior cingulate gyrus;anterior hypothalamus;caudate nucleus;cerebellum;claustrum;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;preoptic area;putamen;septum;spinal cord dorsal;spinal cord ventral;straight gyrus;subiculum;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
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chr1 6223429 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 3 3 orbital gyrus;precentral gyrus;spinal cord ventral
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chr1 6223449 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 12 11 anterior cingulate gyrus;claustrum;dentate gyrus;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;posterior cingulate gyrus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;putamen
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chr1 6223464 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 27 23 amygdala;anterior hypothalamus;claustrum;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;preoptic area;septum;spinal cord dorsal;straight gyrus;substantia nigra;superior parietal lobule
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chr1 6223507 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 7 7 claustrum;entorhinal cortex;insular cortex;spinal cord dorsal;straight gyrus;subiculum;superior parietal lobule
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chr1 6223513 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 2 2 middle frontal gyrus;preoptic area
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chr1 6225652 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 21 19 claustrum;globus pallidus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;occipital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;precentral gyrus;septum;spinal cord dorsal;spinal cord ventral;subiculum;superior frontal gyrus;superior temporal gyrus;supramarginal gyrus;thalamus
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chr1 6225658 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 2 2 posterior hippocampus;spinal cord dorsal
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chr1 6225711 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 21 19 amygdala;annectant gyrus;claustrum;dentate gyrus;geniculate nucleus;globus pallidus;inferior frontal gyrus;insular cortex;middle temporal gyrus;orbital gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;putamen;septum;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
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chr1 6225728 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 7 7 amygdala;anterior hypothalamus;caudate nucleus;claustrum;insular cortex;postcentral gyrus;subiculum
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chr1 6225739 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 6 6 amygdala;orbital gyrus;spinal cord dorsal;straight gyrus;superior parietal lobule;superior temporal gyrus
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chr1 6225759 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 2 2 claustrum;middle temporal gyrus
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chr1 6226380 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 8 8 amygdala;cuneus;inferior temporal gyrus;insular cortex;middle frontal gyrus;posterior cingulate gyrus;superior frontal gyrus;superior parietal lobule
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chr1 6226418 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 6 6 inferior temporal gyrus;insular cortex;medulla;occipital gyrus;superior parietal lobule;superior temporal gyrus
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chr1 6226444 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 2 2 postcentral gyrus;superior parietal lobule
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chr1 6226470 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 7 7 insular cortex;occipital gyrus;posterior hypothalamus;putamen;spinal cord dorsal;substantia nigra;superior parietal lobule
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chr1 6226501 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 2 2 insular cortex;postcentral gyrus
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chr1 6226514 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 8 8 geniculate nucleus;inferior frontal gyrus;medulla;posterior hypothalamus;posterior parahippocampal gyrus;septum;spinal cord dorsal;substantia nigra
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chr1 6226536 T C ALU SINE/Alu ENSMFAG00000045247:SDCCAG8 SDCCAG8 Intronic - - 4 4 insular cortex;occipital gyrus;posterior hypothalamus;thalamus
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chr1 6234805 A G REP LINE/CR1 ENSMFAG00000002285:CEP170 CEP170 Intronic - - 44 36 amygdala;anterior cingulate gyrus;anterior hypothalamus;caudate nucleus;cerebellum;claustrum;dentate gyrus;entorhinal cortex;geniculate nucleus;inferior frontal gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;preoptic area;putamen;septum;spinal cord dorsal;straight gyrus;subiculum;substantia nigra;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
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chr1 6235004 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 2 2 posterior cingulate gyrus;posterior parahippocampal gyrus
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chr1 6235012 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 19 19 amygdala;anterior cingulate gyrus;entorhinal cortex;globus pallidus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;occipital gyrus;posterior cingulate gyrus;posterior parahippocampal gyrus;precentral gyrus;putamen;septum;straight gyrus;subiculum;substantia nigra;superior parietal lobule;thalamus
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chr1 6235049 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 3 3 orbital gyrus;septum;superior parietal lobule
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chr1 6235129 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 3 3 posterior parahippocampal gyrus;septum;substantia nigra
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chr1 6235779 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 2 2 geniculate nucleus;preoptic area
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chr1 6235843 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 6 6 anterior cingulate gyrus;cerebellum;cuneus;entorhinal cortex;spinal cord dorsal;superior parietal lobule
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chr1 6235862 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 7 7 cerebellum;cuneus;entorhinal cortex;inferior frontal gyrus;posterior parahippocampal gyrus;precentral gyrus;septum
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chr1 6235882 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 7 7 anterior cingulate gyrus;cuneus;entorhinal cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;pons
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chr1 6235888 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 20 20 caudate nucleus;cerebellum;cuneus;dentate gyrus;entorhinal cortex;inferior frontal gyrus;inferior temporal gyrus;lateral occipitotemporal gyrus;middle frontal gyrus;occipital gyrus;postcentral gyrus;precentral gyrus;putamen;septum;spinal cord dorsal;straight gyrus;substantia nigra;superior frontal gyrus;supramarginal gyrus;thalamus
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chr1 6235905 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 8 7 cerebellum;inferior occipital gyrus;middle temporal gyrus;occipital gyrus;precentral gyrus;substantia nigra;superior frontal gyrus
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chr1 6235927 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 3 3 cerebellum;superior parietal lobule;thalamus
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chr1 6237465 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 9 9 amygdala;caudate nucleus;dentate gyrus;entorhinal cortex;inferior temporal gyrus;middle temporal gyrus;preoptic area;septum;substantia nigra
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chr1 6237517 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 12 12 amygdala;caudate nucleus;geniculate nucleus;inferior occipital gyrus;insular cortex;middle frontal gyrus;postcentral gyrus;posterior parahippocampal gyrus;spinal cord dorsal;substantia nigra;superior parietal lobule;superior temporal gyrus
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chr1 6237541 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 3 3 anterior cingulate gyrus;caudate nucleus;postcentral gyrus
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chr1 6237551 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 8 7 claustrum;cuneus;globus pallidus;precentral gyrus;putamen;substantia nigra;superior parietal lobule
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chr1 6237562 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 4 4 dentate gyrus;geniculate nucleus;globus pallidus;posterior hypothalamus
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chr1 6237580 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 3 3 dentate gyrus;inferior occipital gyrus;subiculum
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chr1 6237607 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 8 7 amygdala;cerebellum;middle frontal gyrus;pons;septum;subiculum;superior frontal gyrus
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chr1 6237620 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 6 6 amygdala;inferior occipital gyrus;lateral occipitotemporal gyrus;occipital gyrus;posterior hypothalamus;thalamus
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chr1 6237633 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 4 3 inferior occipital gyrus;septum;straight gyrus
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chr1 6237653 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 9 8 globus pallidus;inferior occipital gyrus;middle temporal gyrus;posterior parahippocampal gyrus;precentral gyrus;preoptic area;septum;straight gyrus
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chr1 6237682 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 2 2 inferior temporal gyrus;superior temporal gyrus
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chr1 6237706 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 3 3 septum;spinal cord dorsal;straight gyrus
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chr1 6238642 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 38 30 amygdala;angular gyrus;annectant gyrus;caudate nucleus;claustrum;entorhinal cortex;geniculate nucleus;inferior frontal gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;preoptic area;septum;spinal cord dorsal;straight gyrus;subiculum;substantia nigra;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
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chr1 6238651 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 4 4 middle temporal gyrus;pons;precentral gyrus;supramarginal gyrus
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chr1 6238686 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 3 3 inferior temporal gyrus;subiculum;substantia nigra
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chr1 6238695 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 3 3 medulla;postcentral gyrus;substantia nigra
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chr1 6238701 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 3 3 inferior temporal gyrus;spinal cord ventral;superior temporal gyrus
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chr1 6238704 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 36 29 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hypothalamus;caudate nucleus;claustrum;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;middle temporal gyrus;orbital gyrus;pons;postcentral gyrus;precentral gyrus;preoptic area;septum;spinal cord dorsal;subiculum;superior colliculus;superior temporal gyrus;supramarginal gyrus;thalamus
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chr1 6238722 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 4 4 insular cortex;septum;superior colliculus;superior temporal gyrus
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chr1 6238724 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 43 32 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;caudate nucleus;cuneus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle temporal gyrus;occipital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;preoptic area;septum;spinal cord dorsal;spinal cord ventral;subiculum;substantia nigra;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus
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chr1 6238730 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 8 8 angular gyrus;cerebellum;cuneus;geniculate nucleus;middle temporal gyrus;spinal cord dorsal;spinal cord ventral;superior colliculus
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chr1 6238731 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 28 27 angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;caudate nucleus;claustrum;entorhinal cortex;geniculate nucleus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;middle frontal gyrus;middle temporal gyrus;occipital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;septum;spinal cord dorsal;superior colliculus;superior temporal gyrus;thalamus
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chr1 6238740 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 2 2 claustrum;superior temporal gyrus
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chr1 6238756 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 4 4 inferior occipital gyrus;middle temporal gyrus;posterior hypothalamus;superior temporal gyrus
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chr1 6238775 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 14 13 claustrum;entorhinal cortex;geniculate nucleus;globus pallidus;inferior temporal gyrus;insular cortex;midbrain;posterior hippocampus;posterior hypothalamus;precentral gyrus;straight gyrus;subiculum;superior parietal lobule
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chr1 6238782 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 12 12 annectant gyrus;caudate nucleus;claustrum;inferior occipital gyrus;lateral occipitotemporal gyrus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;septum;superior parietal lobule;superior temporal gyrus;supramarginal gyrus
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chr1 6238785 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 4 4 entorhinal cortex;posterior hippocampus;spinal cord ventral;subiculum
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chr1 6238791 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 22 22 amygdala;angular gyrus;anterior cingulate gyrus;anterior hypothalamus;caudate nucleus;cerebellum;entorhinal cortex;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;medulla;middle temporal gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;precentral gyrus;septum;superior frontal gyrus;superior parietal lobule;superior temporal gyrus
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chr1 6238800 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 51 39 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hypothalamus;cerebellum;claustrum;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;medulla;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;preoptic area;septum;spinal cord dorsal;spinal cord ventral;straight gyrus;subiculum;substantia nigra;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus
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chr1 6238820 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 4 4 annectant gyrus;anterior cingulate gyrus;inferior occipital gyrus;posterior parahippocampal gyrus
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chr1 6239152 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 2 2 postcentral gyrus;superior parietal lobule
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chr1 6239176 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 37 29 amygdala;annectant gyrus;anterior hippocampus;cerebellum;claustrum;cuneus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior frontal gyrus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;medulla;middle frontal gyrus;middle temporal gyrus;postcentral gyrus;posterior hippocampus;posterior parahippocampal gyrus;precentral gyrus;preoptic area;septum;spinal cord dorsal;subiculum;superior colliculus;superior frontal gyrus;superior parietal lobule;supramarginal gyrus;thalamus
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chr1 6239205 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 59 44 amygdala;angular gyrus;annectant gyrus;anterior cingulate gyrus;anterior hippocampus;anterior hypothalamus;caudate nucleus;cerebellum;claustrum;cuneus;dentate gyrus;entorhinal cortex;geniculate nucleus;globus pallidus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;medulla;midbrain;middle frontal gyrus;middle temporal gyrus;occipital gyrus;orbital gyrus;pons;postcentral gyrus;posterior cingulate gyrus;posterior hippocampus;posterior hypothalamus;posterior parahippocampal gyrus;precentral gyrus;preoptic area;putamen;septum;spinal cord dorsal;spinal cord ventral;straight gyrus;subiculum;substantia nigra;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;supramarginal gyrus;thalamus
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chr1 6239207 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 4 4 claustrum;inferior frontal gyrus;postcentral gyrus;substantia nigra
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chr1 6239214 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 17 15 cerebellum;cuneus;entorhinal cortex;inferior occipital gyrus;medulla;middle frontal gyrus;middle temporal gyrus;postcentral gyrus;posterior cingulate gyrus;posterior hypothalamus;precentral gyrus;septum;substantia nigra;superior parietal lobule;superior temporal gyrus
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chr1 6239273 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 15 15 amygdala;anterior hypothalamus;entorhinal cortex;insular cortex;medulla;midbrain;middle temporal gyrus;occipital gyrus;posterior hypothalamus;posterior parahippocampal gyrus;subiculum;superior colliculus;superior frontal gyrus;superior parietal lobule;superior temporal gyrus
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chr1 6239380 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 12 11 entorhinal cortex;globus pallidus;middle temporal gyrus;postcentral gyrus;posterior hypothalamus;preoptic area;putamen;septum;spinal cord dorsal;subiculum;substantia nigra
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chr1 6239417 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 31 28 anterior cingulate gyrus;anterior hypothalamus;caudate nucleus;cerebellum;claustrum;cuneus;dentate gyrus;entorhinal cortex;globus pallidus;inferior occipital gyrus;inferior temporal gyrus;insular cortex;lateral occipitotemporal gyrus;middle frontal gyrus;middle temporal gyrus;posterior cingulate gyrus;posterior parahippocampal gyrus;preoptic area;putamen;septum;spinal cord dorsal;straight gyrus;subiculum;substantia nigra;superior frontal gyrus;superior parietal lobule;superior temporal gyrus;thalamus
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chr1 6239453 A G ALU SINE/Alu ENSMFAG00000002285:CEP170 CEP170 Intronic - - 6 6 insular cortex;lateral occipitotemporal gyrus;occipital gyrus;pons;posterior hypothalamus;superior parietal lobule
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