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def get_add_many_columns_function(row_function, data_types): """Returns a function which adds several columns to a row based on given row function""" def add_many_columns(row): result = row_function(row) data = [] for i, data_type in enumerate(data_types): try: ...
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import torch def sumlike_wrap(fun_name): """Handle torch.sum and torch.mean""" # Define appropriate torch function, the rest of the logic is the same assert fun_name in ['sum', 'mean'] torch_fun = getattr(torch, fun_name) @wraps(torch_fun) def sumlike_fun(input, dim=None, keepdim=False): ...
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def __crossover(n: int, g: np.matrix, m_list: np.array, f_list: np.array) -> np.matrix: """ :param n: half of g.shape[0] :param g: bin mat of genes :param m_list: male nums :param f_list: female nums :return: crossed-over bin mat of genes """ cros = np.random.randint(low=0, high=g.shape[1], size=n) g_cros = n...
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def setup_system(): """ Galacitic center potential and Arches cluster position from Kruijssen 2014 """ potential = static_potentials.Galactic_Center_Potential_Kruijssen() cluster = Particle() # At time 2.05 in KDL15 cluster.position = [-17.55767, -53.26560, -9.39921] | units.par...
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from typing import Iterable from typing import List def collect_dynamic_libs(name: str, dest: str = ".", dependencies: bool = True, excludes: Iterable[str] = None) -> List: """ Collect DLLs for distribution **name**. Arguments: name: The distribution's project...
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import pickle def make_agreements(file) -> pd.DataFrame: """In some of the human conditions, we hold out questions. Each randomly generated agent is given our test and then asked it's opinion on every hold out question. agreements.pkl is a Dict[Experiment, Tuple(ndarray, ndarray)] where each array elemen...
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def column_as_html(column, table): """Return column as an HTML row.""" markup = "<tr>" markup += "<td class='field'>{0}</td>".format(column.name, column.comment) markup += "<td>{0}</td>".format(column.formattedType) # Check for Primary Key if table.isPrimaryKeyColumn(column): markup += ...
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def covariation(x, y): """ Covariation of X and Y. :param list or tuple x: 1st array. :param list or tuple y: 2nd array. :return: covariation. :rtype: float :raise ValueError: when x or y is empty """ if x and y: m_x = mean(x) m_y = mean(y) dev_x = [i - m_x f...
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def stripped_spaces_around(converter): """Make converter that strippes leading and trailing spaces. ``converter`` is called to further convert non-``None`` values. """ def stripped_text_converter(value): if value is None: return None return converter(value.strip()) ret...
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from typing import Union from typing import Literal from typing import Any def ootf_inverse( value: FloatingOrArrayLike, function: Union[ Literal["ITU-R BT.2100 HLG", "ITU-R BT.2100 PQ"], str ] = "ITU-R BT.2100 PQ", **kwargs: Any ) -> FloatingOrNDArray: """ Maps relative display linear...
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def modified_query(benchmark, model_spec, run_index: int, epochs=108, stop_halfway=False): """ NOTE: Copied from https://github.com/google-research/nasbench/blob/b94247037ee470418a3e56dcb83814e9be83f3a8/nasbench/api.py#L204-L263 # noqa We changed the function in such a way that we now can specified the...
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def gauss(x, mu=0, sigma=1): """ Unnormalized Gaussian distribution. Parameters ---------- Returns ------- y : type(x) Gaussian evaluated at x. Notes ----- Some people use alpha (1/e point) instead of the sigma (standard deviation) to define the width of the Gaussian. They are r...
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def GetSpd(ea): """ Get current delta for the stack pointer @param ea: end address of the instruction i.e.the last address of the instruction+1 @return: The difference between the original SP upon entering the function and SP for the specified address """ func = ida...
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def is_fugashi_ipadic_available(): """ Check if the library is available. This function checks if sentencepiece is available in your environment and returns the result as a bool value. Returns ------- _fugashi_ipadic_available : bool If True, fugashi wiht ipadic is available in you...
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import torch def pad_to_sidelength(schematic, labels=None, nothing_id=0, sidelength=32): """Add padding to schematics to sidelength""" szs = list(schematic.size()) szs = np.add(szs, -sidelength) pad = [] # this is all backwards bc pytorch pad semantics :( for s in szs: if s >= 0: ...
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def segmentation_gaussian_measurement_batch( y_true, y_pred, gaussian_sigma=3, measurement=segmentation_losses.binary_crossentropy): """ Apply metric or loss measurement to a batch of data incorporating a 2D gaussian. Only works with batch size 1. Loop and call this ...
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def save_image(img: Image, img_format=None, quality=85): """ Сохранить картинку из потока в переменную для дальнейшей отправки по сети """ if img_format is None: img_format = img.format output_stream = BytesIO() output_stream.name = 'image.jpeg' # на Ubuntu почему-то нет jpg, но есть jpe...
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def check_input(args: dict) -> dict: """ Check if user entries latitude and longitude are well formated. If ok, retruns a dict with lat and lng converted as flaots - args: dict. request.args """ lat = args.get("lat") lng = args.get("lng") if lat is None: abort(400, "Latitude...
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def adjust_learning_rate(epoch, total_epochs, only_ce_epochs, learning_rate, optimizer): """Adjust learning rate during training. Parameters ---------- epoch: Current training epoch. total_epochs: Total number of epochs for training. only_ce_epochs: Number of epochs for ...
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def dummy_nullgeod(): """ Equatorial Geodesic """ return Nulllike( metric="Kerr", metric_params=(0.5,), position=[4., np.pi / 2, 0.], momentum=[0., 0., 2.], steps=50, delta=0.5, return_cartesian=False, suppress_warnings=True, )
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def flatten(tensor): """Flattens a given tensor such that the channel axis is first. The shapes are transformed as follows: (N, C, D, H, W) -> (C, N * D * H * W) """ C = tensor.size(1) # new axis order axis_order = (1, 0) + tuple(range(2, tensor.dim())) # Transpose: (N, C, D, H, W) ->...
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from chiesa_correction import align_gvectors def compare_scalar_grids(gvecs0, nkm0, gvecs1, nkm1, atol=1e-6): """Compare two scalar fields sampled on regular grids Args: gvecs0 (np.array): first grid, (npt0, ndim) nkm0 (np.array): values, (npt0,) gvecs1 (np.array): second grid, (npt1, ndim), expect n...
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def a_dot(t): """ Derivative of a, the scale factor :param t: :return: """ return H0 * ((3 / 2) * H0 * t) ** (-1 / 3)
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def frame(x, frame_length, hop_length, axis=-1, name=None): """ Slice the N-dimensional (where N >= 1) input into (overlapping) frames. Args: x (Tensor): The input data which is a N-dimensional (where N >= 1) Tensor with shape `[..., seq_length]` or `[seq_length, ...]`. frame_le...
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import functools def wrapped_partial(func: callable, *args, **kwargs) -> callable: """Wrap a function with partial args and kwargs. Args: func (callable): The function to be wrapped. *args (type): Args to be wrapped. **kwargs (type): Kwargs to be wrapped. Returns: callabl...
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import typing def with_sfw_check( command: typing.Optional[CommandT] = None, /, *, error_message: typing.Optional[str] = "Command can only be used in SFW channels", halt_execution: bool = False, ) -> CallbackReturnT[CommandT]: """Only let a command run in a channel that's marked as sfw. P...
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def algorithm_id_to_generation_class(algorithm_id): """ Returns the Generation class corresponding to the provided algorithm ID (as defined in settings). """ return _algorithm_id_to_class_data(algorithm_id)[1]
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def search(session, **kwargs): """ Searches the Discogs API for a release object Arguments: session (requests.Session) - API session object **kwargs (dict) - All kwargs are added as query parameters in the search call Returns: dict - The first result returned in the search Raises: ...
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def _conv_general_precision_config_proto(precision): """Convert an integer to an XLA.PrecisionConfig.""" if precision is None: return None proto = xla_data_pb2.PrecisionConfig() proto.operand_precision.append(int(precision)) return proto
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def list_in_list(a, l): """Checks if a list is in a list and returns its index if it is (otherwise returns -1). Parameters ---------- a : list() List to search for. l : list() List to search through. """ return next((i for i, elem in enumerate(l) if elem == a), -1)
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def sent_to_idx(sent, word2idx, sequence_len): """ convert sentence to index array """ unknown_id = word2idx.get("UNKNOWN", 0) sent2idx = [word2idx.get(word, unknown_id) for word in sent.split("_")[:sequence_len]] return sent2idx
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from re import T def expand_sqs_results(settings: Settings, sqs_results: T.Iterable[SQSResult], timings: T.Optional[TimingDictionary] = None, include=('configuration',), inplace: bool = False) -> Settings: """ Serializes a list of :py:class:`sqsgenerator.public.SQ...
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def test_files_atlas(test_files): """ATLAS files""" # ssbio/test/test_files/atlas return op.join(test_files, 'atlas')
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from modefit.basics import get_polyfit def _get_xaxis_polynomial_(xyv, degree=DEGREE, legendre=LEGENDRE, xmodel=None, clipping = [5,5]): """ """ x,y,v = xyv flagin = ((np.nanmean(y) - clipping[0] * np.nanstd(y)) < y) * (y< (np.nanmean(y) + clipping[1] * np.nanstd(y))) co...
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def generateKey(): """ Method to generate a encryption key """ try: key = Fernet.generate_key() updateClipboard(f"export LVMANAGER_PW={str(key)[2:-1]}") print(f"Key: {key}") print("Export command copied to clipboard. Save this value!") return True except Excep...
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def _zpkbilinear(z, p, k, fs): """ Return a digital filter from an analog one using a bilinear transform """ z = np.atleast_1d(z) p = np.atleast_1d(p) degree = _relative_degree(z, p) fs2 = 2.0 * fs # Bilinear transform the poles and zeros z_z = (fs2 + z) / (fs2 - z) p_z = (fs2 + p) / (fs...
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def so3exp(w): """ Maps so(3) --> SO(3) group with closed form expression. """ theta = np.linalg.norm(w) if theta < _EPS * 3: return np.eye(3) else: w_hat = S03_hat_operator(w) R = np.eye(3) + (np.sin(theta) / theta) * w_hat + ((1 - np.cos(theta)) / theta**2) * np.dot...
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def bin2ppm(nproc_old, model_tags, region, npts, nproc, old_mesh_dir, old_model_dir, output_dir): """ convert the bin files to the ppm model. """ result = "" julia_path = get_julia("specfem_gll.jl/src/program/get_ppm_model.jl") latnproc, lonnproc = map(int, nproc.split("/")) npro...
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def st_sdata(obs, cols): """return string data in given observation numbers as a list of lists, one sub-list for each row; obs should be int or iterable of int; cols should be a single str or int or iterable of str or int """ obs, cols, _ = _parseObsColsVals(obs, cols) if not all(st_i...
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def list_data(args, data): """List all servers and files associated with this project.""" if len(data["remotes"]) > 0: print("Servers:") for server in data["remotes"]: if server["name"] == server["location"]: print(server["user"] + "@" + server["location"]) ...
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def vecInt(xx, vv, p, interpolation = 'weighted'): """ Interpolates the field around this position. call signature: vecInt(xx, vv, p, interpolation = 'weighted') Keyword arguments: *xx*: Position vector around which will be interpolated. *vv*: Vector ...
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def anchor_inside_flags(flat_anchors, valid_flags, img_shape, allowed_border=0, device='cuda'): """Anchor inside flags. :param flat_anchors: flat anchors :param valid_flags: valid flags :param img_shape: image meta info :param allowed_border: if allow border :return: ins...
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def notinLRG_mask(primary=None, rflux=None, zflux=None, w1flux=None, rflux_snr=None, zflux_snr=None, w1flux_snr=None): """See :func:`~desitarget.sv1.sv1_cuts.isLRG` for details. Returns ------- :class:`array_like` ``True`` if and only if the object is NOT masked for poor quali...
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def get_theta_def(pos_balle:tuple, cote:str): """ Retourne les deux angles theta (voir les explications) pour que le goal soit aligné avec la balle. Ceux-ci sont calculés en fonction des deux poteaux pour avoir les deux "extrémités" pour être correctement alignées. Paramètres: - pos_balle : tuple - conti...
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def public_doc(): """Documentation for this api.""" return auto.html(groups=['public'], title='Ocean App Web Service Public Documentation')
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def getAllTeams(): """ returns the entire list of teams """ return Team.objects.order_by('name').all()
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def parse_lamp_flags(flags): """Parses flags and returns a dict that represents the lamp states.""" # flags: [0123]{8} values = _swap_key_and_value(_LAMP_STATES) # {value: state} states = dict([ (color, values[flags[digit]]) for color, digit in _LAMP_DIGITS.items() ]) return {'lamps': s...
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def user_owns_item(function): """ Decorator that checks that the item was created by current user. """ @wraps(function) def wrapper(category_name, item_name, *args, **kwargs): category = db_session.query(Category ).filter_by(name=category_name).one() user_...
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def generate_bit_byte_overview(inputstring, number_of_indent_spaces=4, show_reverse_bitnumbering=False): """Generate a nice overview of a CAN frame. Args: inputstring (str): String that should be printed. Should be 64 characters long. number_of_indent_spaces (int): Size of indentation ...
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def return_list_of_file_paths(folder_path): """Returns a list of file paths Args: folder_path: The folder path were the files are in Returns: file_info: List of full file paths """ file_info = [] list_of_file_names = [fileName for fileName in listdir(folder_path) if isfile(joi...
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import numpy def artificial_signal( frequencys, sampling_frequency=16000, duration=0.025 ): """ Concatonates a sequence of sinusoids of frequency f in frequencies """ sins = map( lambda f : sinusoid(f, sampling_frequency, duration), frequencys) return numpy.concatenate( tuple(sins) )
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def _sources(): """Return the subdir name and extension of each of the contact prediction types. :return: Contact prediction types and location. :rtype: dict [list [str]] """ sources = _sourcenames() confiledir = ["deepmetapsicov", "deepmetapsicov", "deepmetapsicov"] confilesuffix = ["psic...
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def pdns_forward(hostname): """Get the IP addresses to which the given host has resolved.""" response = get(BASE_API_URL + "pdns/forward/{}".format(hostname)) return response
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def make_conv(in_channels, out_channels, conv_type="normal", kernel_size=3, mask_activation=None, version=2, mask_init_bias=0, depth_multiplier=1, **kwargs): """Create a convolution layer. Options: deformable, separable, or normal convolution """ assert conv_type in ("deformable", "separable", "normal") ...
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import requests from selenium import webdriver from time import sleep from typing import Callable def url_to_html_func(kind="requests") -> Callable: """Get a url_to_html function of a given kind.""" url_to_html = None if kind == "requests": def url_to_html(url): r = requests.get(url) ...
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def head(filename, format=None, **kwargs): """ Returns the header of a file. Reads the information about the content of the file without actually loading the data. Returns either an Header class or an Archive accordingly if the file contains a single object or it is an archive, respectively. Parame...
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def uncomment_magic( source, language="python", global_escape_flag=True, explicitly_code=True ): """Unescape Jupyter magics""" parser = StringParser(language) next_is_magic = False for pos, line in enumerate(source): if not parser.is_quoted() and ( next_is_magic or is...
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from re import T import logging def clean_nice_ionice_parameters(value): """Verify that the passed parameters are not exploits""" if value: parser = ErrorCatchingArgumentParser() # Nice parameters parser.add_argument("-n", "--adjustment", type=int) # Ionice parameters, not su...
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def rand_alnum(length=0): """ Create a random string with random length :return: A random string of with length > 10 and length < 30. """ jibber = ''.join([letters, digits]) return ''.join(choice(jibber) for _ in xrange(length or randint(10, 30)))
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def _GenerateGstorageLink(c, p, b): """Generate Google storage link given channel, platform, and build.""" return 'gs://chromeos-releases/%s-channel/%s/%s/' % (c, p, b)
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def parse_decl(inputtype, flags): """ Parse type declaration @param inputtype: file name or C declarations (depending on the flags) @param flags: combination of PT_... constants or 0 @return: None on failure or (name, type, fields) tuple """ if len(inputtype) != 0 and inputtype[-1] != ';':...
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def post_attention(h, attn_vec, d_model, n_head, d_head, dropout, is_training, kernel_initializer, residual=True): """Post-attention processing.""" monitor_dict = {} # post-attention projection (back to `d_model`) proj_o = tf.get_variable("o/kernel", [d_model, n_head, d_head], ...
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def get_recursively(in_dict, search_pattern): """ Takes a dict with nested lists and dicts, and searches all dicts for a key of the field provided. """ fields_found = [] for key, value in in_dict.items(): if key == search_pattern: fields_found.append(value) elif ...
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def neals_funnel(ndims = 10, name = 'neals_funnel'): """Creates a funnel-shaped distribution. This distribution was first described in [1]. The distribution is constructed by transforming a N-D gaussian with scale [3, 1, ...] by scaling all but the first dimensions by `exp(x0 / 2)` where `x0`...
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def _has_desired_permit(permits, acategory, astatus): """ return True if permits has one whose category_code and status_code match with the given ones """ if permits is None: return False for permit in permits: if permit.category_code == acategory and\ permit.status_co...
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def colon(mac): """ aa:aa:aa:aa:aa:aa """ return _reformat(mac, separator=':', digit_grouping=2)
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import requests from bs4 import BeautifulSoup import re def create_strings_from_wikipedia(minimum_length, count, lang): """ Create all string by randomly picking Wikipedia articles and taking sentences from them. """ sentences = [] while len(sentences) < count: # We fetch a random pag...
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def computeHashCheck(ringInputString, ringSize): """Calculate the knot hash check. Args: ringInputString (str): The list of ints to be hashed as a comma-separated list. ringSize (int): The size of the ring to be \"knotted\". Returns: int: Value of the hash check. """ ringI...
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from masci_tools.util.xml.xml_setters_basic import xml_delete_tag from masci_tools.util.xml.common_functions import check_complex_xpath from typing import Union from typing import Iterable from typing import Any def delete_tag(xmltree: Union[etree._Element, etree._ElementTree], schema_dict: 'fleur_sche...
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def cart2pol_vectorised(x, y): """ A vectorised version of the cartesian to polar conversion. :param x: :param y: :return: """ r = np.sqrt(np.add(np.power(x, 2), np.power(y, 2))) th = np.arctan2(y, x) return r, th
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def encryption(text): """ encryption function for saving ideas :param text: :return: """ return AES.new(cipher_key, AES.MODE_CBC, cipher_IV456).encrypt(text * 16)
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def _concat(to_stack): """ function to stack (or concatentate) depending on dimensions """ if np.asarray(to_stack[0]).ndim >= 2: return np.concatenate(to_stack) else: return np.hstack(to_stack)
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import math def make_orthonormal_matrix(n): """ Makes a square matrix which is orthonormal by concatenating random Householder transformations Note: May not distribute uniformly in the O(n) manifold. Note: Naively using ortho_group, special_ortho_group in scipy will result in unbearable computin...
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from typing import Dict from typing import Tuple def build_synthetic_dataset_cae(window_size:int, **kwargs:Dict)->Tuple[SingleGapWindowsSequence, SingleGapWindowsSequence]: """Return SingleGapWindowsSequence for training and testing. Parameters -------------------------- window_size: int, Win...
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import random def montecarlo_2048(game, simulations_per_move, steps, count_zeros=False, print_averages=True, return_scores=False): """ Test each possible move, run montecarlo simulations and return a dictionary of average scores, one score for each possible move """ # Retrieve game score at the c...
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def getAggregation(name, local=False, minOnly=False, maxOnly=False): """ Get aggregation. """ toReturn = STATISTICS[name].getStatistic() if local: return STATISTICS[name].getLocalValue() elif minOnly and "min" in toReturn: return toReturn["min"] elif maxOnly and "max" in toRe...
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def get_gene_symbol(row): """Extracts gene name from annotation Args: row (pandas.Series): annotation info (str) at 'annotation' index Returns: gene_symbol (str): gene name(s) """ pd.options.mode.chained_assignment = None lst = row["annotation"].split(",") genes = [token.sp...
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from datetime import datetime def session_login(): """ Session login :return: """ print("Session Login") # Get the ID token sent by the client # id_token = request.headers.get('csfToken') id_token = request.values.get('idToken') # Set session expiration to 5 days. expires_in = ...
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from django.core.cache import get_cache def get_cache_factory(cache_type): """ Helper to only return a single instance of a cache As of django 1.7, may not be needed. """ if cache_type is None: cache_type = 'default' if not cache_type in cache_factory: cache_factory[c...
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import six import pickle def ruleset_from_pickle(file): """ Read a pickled ruleset from disk This can be either pickled Rules or Ryu Rules. file: The readable binary file-like object, or the name of the input file return: A ruleset, a list of Rules """ if six.PY3: ruleset...
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def delayed_read_band_data(fpar_dataset_name, qc_dataset_name): """Read band data from a HDF4 file. Assumes the first dimensions have a size 1. FparLai_QC. Bit no. 5-7 3-4 2 1 0 Acceptable values: 000 00 0 0 0 001 01 0 0 0 Unacceptable mask: 110 10 1 1...
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def _aggregate_pop_simplified_comix( pop: pd.Series, target: pd.DataFrame ) -> pd.DataFrame: """ Aggregates the population matrix based on the CoMix table. :param pop: 1-year based population :param target: target dataframe we will want to multiply or divide with :return: Retuns a dataframe tha...
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def authenticate(): """ Uses HTTP basic authentication to generate an authentication token. Any resource that requires authentication can use either basic auth or this token. """ token = serialize_token(basic_auth.current_user()) response = {'token': token.decode('ascii')} return jsonify(response)
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import torch def split_image(image, N): """ image: (B, C, W, H) """ batches = [] for i in list(torch.split(image, N, dim=2)): batches.extend(list(torch.split(i, N, dim=3))) return batches
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def _upsample_add(x, y): """Upsample and add two feature maps. Args: x: (Variable) top feature map to be upsampled. y: (Variable) lateral feature map. Returns: (Variable) added feature map. Note in PyTorch, when input size is odd, the upsampled feature map with `F.upsample(..., sca...
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def get_eta_and_mu(alpha): """Get the value of eta and mu. See (4.46) of the PhD thesis of J.-M. Battini. Parameters ---------- alpha: float the angle of the rotation. Returns ------- The first coefficient eta: float. The second coefficient mu: float. """ if alpha == 0...
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def load_data(city, month, day): """ Loads data for the specified city and filters by month and day if applicable. Args: (str) city - name of the city to analyze (str) month - name of the month to filter by, or "all" to apply no month filter (str) day - name of the day of week to fi...
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def write_error_row(rowNum, errInfo): """Google Sheets API Code. Writes all team news link data from RSS feed to the NFL Team Articles speadsheet. https://docs.google.com/spreadsheets/d/1XiOZWw3S__3l20Fo0LzpMmnro9NYDulJtMko09KsZJQ/edit#gid=0 """ credentials = get_credentials() http = credential...
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import json def get_last_transaction(): """ return last transaction form blockchain """ try: transaction = w3.eth.get_transaction_by_block(w3.eth.blockNumber, 0) tx_dict = dict(transaction) tx_json = json.dumps(tx_dict, cls=HexJsonEncoder) return tx_json except Exception as...
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def get_tp_model() -> TargetPlatformModel: """ A method that generates a default target platform model, with base 8-bit quantization configuration and 8, 4, 2 bits configuration list for mixed-precision quantization. NOTE: in order to generate a target platform model with different configurations but wi...
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from typing import Optional def check_sparv_version() -> Optional[bool]: """Check if the Sparv data dir is outdated. Returns: True if up to date, False if outdated, None if version file is missing. """ data_dir = paths.get_data_path() version_file = (data_dir / VERSION_FILE) if versio...
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def grav_n(expt_name, num_samples, num_particles, T_max, dt, srate, noise_std, seed): """2-body gravitational problem""" ##### ENERGY ##### def potential_energy(state): '''U=sum_i,j>i G m_i m_j / r_ij''' tot_energy = np.zeros((1, 1, state.shape[2])) for i in range(state.shape[0]): ...
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def fit_spline_linear_extrapolation(cumul_observations, smoothing_fun=simple_mirroring, smoothed_dat=[], plotf=False, smoothep=True, smooth=0.5, ns=3, H=7): """ Linear extrapolation by splines on log daily cases Input: cumul_observations: cumulative observations, ...
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def compute_dl_target(location): """ When the location is empty, set the location path to /usr/sys/inst.images return: return code : 0 - OK 1 - if error dl_target value or msg in case of error """ if not location or not location.strip(): loc = "...
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def hz_to_angstrom(frequency): """Convert a frequency in Hz to a wavelength in Angstroms. Parameters ---------- frequency: float The frequency in Hz. Returns ------- The wavelength in Angstroms. """ return C / frequency / ANGSTROM
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from re import T def is_literal(token): """ リテラル判定(文字列・数値) """ return token.ttype in T.Literal
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def PutObject(*, session, bucket, key, content, type_="application/octet-stream"): """Saves data to S3 under specified filename and bucketname :param session: The session to use for AWS connection :type session: boto3.session.Session :param bucket: Name of bucket :type bucket: str :param key: Name of file ...
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from io import StringIO def insert_sequences_into_tree(aln, moltype, params={}, write_log=True): """Returns a tree from Alignment object aln. aln: an xxx.Alignment object, or data that can be used to build one. moltype: cogent.core.moltype.MolType object p...
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from azure.cli.core.azclierror import CLIInternalError def billing_invoice_download(client, account_name=None, invoice_name=None, download_token=None, download_urls=None): """ Get URL to downloa...
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import re def find_classes(text): """ find line that contains a top-level open brace then look for class { in that line """ nest_level = 0 brace_re = re.compile("[\{\}]") classname_re = "[\w\<\>\:]+" class_re = re.compile( "(?:class|struct)\s*(\w+)\s*(?:\:\s*public\s*" ...
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