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from typing import List def _ne(t1: 'Tensor', t2: 'Tensor', isnew: bool) -> 'Tensor': """ Also see ------- :param t1: :param t2: :param isnew: :return: """ data = t1.data != t2.data requires_grad = t1.requires_grad or t2.requires_grad depends_on: List[Dependency] = [] ...
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def edit_distance(list1, list2): # To compute the Levenshtein distance between two entries, # say entries 92 and 94, # try this in interactive mode after running this script: # edit_distance(results_list[92].split(',')[1:], results_list[94].split(',')[1:]) """Ref: https://bit.ly/2Pf4a6Z""" #p...
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import math def normStdevMask(img,mask): """ normalize an image with mean = 0 and stddev = 1.0 only inside a mask """ n1 = mask.sum() if n1 == 0: return img sum1 = (img*mask).sum() sumsq1 = (img*img*mask).sum() avg1 = sum1/n1 std1 = math.sqrt((sumsq1 - sum1*sum1/n1)/(n1-1)) std2 = img.std() retu...
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def embed_metadata(fp, meta): # type: (str, iss.IsccMeta) -> Optional[str] """ Embed metadata into a copy of the media file and return path to updated file. :param str fp: Filepath to source media file :param IsccMeta meta: Metadata to embed into media file :return: Filepath to the new media fi...
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def return_title(video_ID): """ - Returns the title of the video with the corresponding video ID. """ if request.method == 'GET': return db.get_video_title(video_ID)
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def evaluate_number(st): """ Returns evaluated number Errors out if invalid """ m = get_number(st) if m: data = m.groupdict() if data["float"]: return float(data["float"]) elif data["integer"]: return int(data["integer"]) return None else: error()
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def sg_add_ingress(pub_ip, sg): """Add ingress rule for SSH TCP/22 to the designated SG""" response = EC2_CLIENT.authorize_security_group_ingress( GroupId=sg, IpProtocol='tcp', FromPort=22, ToPort=22, CidrIp=pub_ip ) return response
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def u_ang_mom_cons(lats, max_lat, rot_rate=ROT_RATE_EARTH, radius=RAD_EARTH): """Angular momentum conserving zonal wind.""" coslat = cosdeg(lats) return rot_rate*radius*coslat*((cosdeg(max_lat) / coslat)**2 - 1)
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def getRandomArmors(numArmors): """Returns a random list of armor of numArmors size. Armors will not overlap protected locations. """ armor = [] filter_base = {"random_count": 1} for aIdx in range(0, numArmors): filter = getArmorFilter(armor) filter.update(filter_base) r...
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from django.contrib.auth.views import redirect_to_login from django.core.xheaders import populate_xheaders def render_flatpage(request, f): """ Internal interface to the flat page view. """ # If registration is required for accessing this page, and the user isn't # logged in, redirect to the login...
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from typing import Iterator def equal_lines(expected: Iterator[str], actual: Iterator[str]) -> bool: """Compares each line of expected input against the actual input, where the inputs may differ in their type (i.e., opposite); returns true if and only if the sequences have the same number of elements ...
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import pkg_resources def get_gene_id_mapping_df(): """ Get dataframe representing the id mapping for genes. The function cache the results to prevent unnecessary calculations. Returns: pd.DataFrame: dataframe for id mapping. """ filepath = pkg_resources.resource_filename( 'ipc...
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from typing import Optional from typing import List from typing import Dict from typing import Any def get_state_change_with_balance_proof_by_locksroot( storage: SerializedSQLiteStorage, canonical_identifier: CanonicalIdentifier, locksroot: Locksroot, sender: Address, ) -> Optional[StateChangeRecord]:...
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def smtp_recipient_remove(handle, email): """ Clears the smtp recipient with given email address Args: handle (ImcHandle) email (int): SMTP recipient email address Returns: MailRecipient object Raises: ImcOperationError Example: smtp_recipient_remove(h...
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from typing import Any def knob(name:str, value:Any=None, getType:int=None, getClass:str=None): """ knob(name, value, getType, getClass) -> None @brief Returns or sets the entire state of a knob. Each individual control on a control panel is called a 'knob'. A knob's name is a dot-separated list...
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def generate_checker(value): """Generate state checker for given value.""" @property @wraps(can_be_) def checker(self): return self.can_be_(value) return checker
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def read_piis(piis): """Return texts extracted from articles with given PIIs. Parameters ---------- piis : list[str] A list of PIIs to extract texts from. Returns ------- texts : dict A dictionary representing PIIs as keys and extracted texts as values. """ texts = ...
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from apysc._html import html_util from apysc._jslib import jslib_util from typing import List def _append_head_to_html_str( *, html_str: str, js_lib_dir_path: str, embed_js_libs: bool) -> str: """ Append head tag section to specified html string. Parameters ---------- html_str : s...
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def l2(a, b): """L2 norm""" return np.sqrt((abs(a - b) ** 2).sum() / (abs(a) ** 2).sum())
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from typing import Dict import json def get_player_clubs(username: str) -> Dict: """Public method that returns list of clubs the player is a member of. Parameters: username -- username of the player """ r = _internal.do_get_request(f"/player/{username}/clubs") return json.loads(r.data...
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from typing import Dict from datetime import datetime def inject_now() -> Dict: """Inject current datetime into request context.""" return dict(request_datetime=datetime.now())
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def pretty_picks_info(picks): """Formats a detailed overview of the current live scores for a team in a Gameweek""" fields = ["Gameweek score", "Automatic subs", "Active chip", "Average Gameweek score", "Highest Gameweek score", "Game updated", "Gameweek finished"] table = PrettyTable(field_na...
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def _make_eof_producer(producer): """ Send a special EOF byte sequence to terminate the request. Args: producer (Callable[[str, socket.socket], None]): Request producer. Returns: Callable[[str, socket.socket], None]: Request producer that sends 'END-OF-FILE' at ...
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def process_structure(): """ Process a structure (uploaded from POST request) """ if flask.request.method == "POST": # check if the post request has the file part if "structurefile" not in flask.request.files: return flask.redirect(flask.url_for("input_data")) structu...
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import math def rotation_matrix_to_euler_angles(R): """ calculates rotation matrix to euler angles referred from https://www.learnopencv.com/rotation-matrix-to-euler-angles """ assert(is_rotation_matrix(R)) sy = math.sqrt(R[0, 0] * R[0, 0] + R[1, 0] * R[1, 0]) singular = sy < 1e-6 if ...
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def get_instructor_schedule_by_term(request, term=None, summer_term=None): """ :return: the instructor's class schedule (uw_sws.models.ClassSchedule) of the given quarter/term and corresponding summer term. :param Term term: None uses current term related to the given request :param str summer_term:...
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import time import functools import asyncio def duration(func): """ decorator that can take either coroutine or normal function I cannot get this to work w/ FastAPI async methods """ @contextmanager def wrapping_logic(): start_ts = time.time() yield dur = time.time() - sta...
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def in_key_rd_dicts( key_rd_dict, key_rd_dicts ): """Return True if key_rd_dict is contained in the list of key_rd_dicts.""" k = key_rd_dict.keys()[ 0 ] v = key_rd_dict[ k ] for key_rd_dict in key_rd_dicts: for key, val in key_rd_dict.items(): if key == k and val == v: ...
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def compute_audio_features_with_phonemes(audio, n_fft=2048, sample_rate=16000, frame_rate=250): """Compute features from audio.""" audio_feats = {'audio': audio} audio = squeeze(audio) audio_feats['loudness_db'] = ddsp.spectral_op...
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from typing import Tuple from typing import Union from typing import Optional from typing import Callable from typing import Any import warnings import ctypes def alloc_array(shape: Tuple[int, ...], dtype: Union[str, np.dtype], layout: Tuple[int, ...], alignment: int = ...
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def sequence_predicting(model, tokenizer, text, labels): """ Sequence-prediction for tasks like text classification, ... """ text = cleanize(text) inputs = tokenizer.encode(text, return_tensors="tf", max_length=128) logits = model(inputs)[0] outputs = tf.keras.backend.softmax(logits) prediction...
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import requests def archive_whatsapp_conversation(org, wa_id, message_id, reason): """ Archives the whatsapp conversation Args: org (Organization): The organisation that this request belongs to wa_id (str): The ID of the user to archive the conversation for message_id (str): the I...
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def get_bprop_correction_mul(self): """Generate bprop for CorrectionMul for Ascend and GPU""" grad_dx = Q.CorrectionMulGrad(self.channel_axis) grad_d_batch_std = Q.CorrectionMulGradReduce(self.channel_axis) def bprop(x, batch_std, running_std, out, dout): dx, d_batch_std = grad_dx(dout, x, batc...
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from typing import List def get_rules() -> List[BaseRule]: """Get plugin rules.""" return [Rule_Comments_L001]
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def delete_file(collection_name: str, file_name: str): """ Delete a file given its collection and file name. :param collection_name: The name of the collection containing the file. :param file_name: The name of the file to be deleted. """ try: fs.collection_manager(collection_name).delet...
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def ZIPConstraint(Params): """Constraint for ZIP modeling. Ensure "fractions" add up to one. a1, b1 = Z%cos(thetaZ), Z%sin(thetaZ) a2, b2 = I%cos(thetaI), I%sin(thetaI) a3, b3 = P%cos(thetaP), P%sin(thetaP) """ # Extract parameters from tuple. # a1, a2, a3, b1, b2, b3 = Params # De...
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from datetime import datetime def otp_open(request): """开启两步认证""" user = request.user user_otp = models.UserOTP.get_user_otp(user) if user_otp.is_bind: raise exceptions.PermissionDenied context = dict(request=request) serializer = serializers.UserOTPChangeSerializer( data=re...
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def getFoodDistList(data): """ getFoodDistList returns None (no food) or a list of tuples ((x, y), dist) where (x,y) are the coords of the food, and dist is distance """ head = getHead(data) listFood = listDictToTuple(data['board']['food']) if not listFood: return None tree =...
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import types async def _resolve_entities(message: str, entities: list) -> dict: """Don't even bother trying to figure this mess out""" messages = [] while entities: end = 100 if len(entities) >= 100 else len(entities) if len(message) > MAXLIM: end, _ = min(enumerate(entities[:e...
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def medical_covered_by_1(responses, derived): """ Return whether the children are covered under Claimant 1's plan """ if responses.get('medical_coverage_available', 'NO') == 'YES': return 'My plan' in responses.get('whose_plan_is_coverage_under', '') return False
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import re def split_text(text, pattern=r";|。|;|,|,"): """split text by pattern Args: text (str): text pattern (regexp, optional): expression. Defaults to r";|。|;|,|,". Returns: str: text split by pattern Examples: >>> s = String() >>> text = "收快递的时候最怕收不到货,所以购...
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def basename(p): """Returns the final component of a pathname""" return split(p)[1]
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def mixedomatic(cls): """ Mixed-in class decorator. """ classinit = cls.__dict__.get('__init__') # Possibly None. # Define an __init__ function for the class. def __init__(self, *args, **kwargs): # Call the __init__ functions of all the bases. for base in cls.__bases__: bas...
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def _make_xml_object(root_name, **attributes): """ Create a new xml root object with a given root name, and attributes Parameters ---------- root_name - str The name of the xml root. attributes - dict Dictionary of attributes and values (as strings) for the xml file Returns...
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def verifier_update(verifier_id, **properties): """Update a verifier record. :param verifier_id: verifier name or UUID :param properties: a dict with new properties to update verifier record :raises ResourceNotFound: if verifier does not exist :returns: the updated dict with verifier data """ ...
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def user_is_full_member(self): """ user is full member of CommonSpaces if has a complete profile and is member of a Community (Project membership is not enough """ if self.is_superuser: return True profile = self.get_profile() if not profile: return False if not profile.get_compl...
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def expanded_indexer(key, ndim): """Given a key for indexing an ndarray, return an equivalent key which is a tuple with length equal to the number of dimensions. The expansion is done by replacing all `Ellipsis` items with the right number of full slices and then padding the key with full slices so tha...
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def sphere_sre(solution): """ Variant of the sphere function. Dimensions except the first 10 ones have limited impact on the function value. """ a = 0 bias = 0.2 x = solution.get_x() x1 = x[:10] x2 = x[10:] value1 = sum([(i-bias)*(i-bias) for i in x1]) value2 = 1/len(x) * sum([(i...
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from typing import Union import pytz from datetime import datetime def localnow(tz: Union[pytz.BaseTzInfo, str] = "US/Central") -> datetime: """ Get the current datetime as a localized datetime object with timezone information Keyword Arguments: tz {Union[pytz.timezone, str]} -- localize datetime to ...
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def mapped(headers): """S3到COS参数的一个映射""" _headers = dict() for i in headers: if i in maplist: if i == 'Metadata': for meta in headers[i]: _headers[meta] = headers[i][meta] else: _headers[maplist[i]] = headers[i] else...
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def get_increment(msg_list): """ :param msg_list: list of on/off midi signals :return: minimum time of all signals """ result = float('inf') for msg in msg_list: if msg.time != 0.0 and msg.time < result: result = msg.time return result
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import timeit def tic(): """ Default timer Example: t = tic() ... code elapsed = toc(t) print( '{0}: {1:.4f}ms'.format(message, elapsed) ) """ global lastticstamp t = timeit.default_timer() lastticstamp = t return t
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def env(key=None): """function for accessing the globally shared and mutable 'env' dictionary. When called without a `key` it returns the whole dictionary.""" _env = api(fab_api.env, threadbare.state.ENV) return _env[key] if key is not None else _env
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def add_node_index(node: StrDict, n: int = 0) -> int: """ Add an index to the node and all its children """ node["index"] = n for child in node.get("children", []): n += 1 n = add_node_index(child, n) return n
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from typing import List import torch from typing import Tuple def collate_fn(batch: List[torch.Tensor]) -> Tuple[Tuple[torch.Tensor]]: """[summary] Args: batch (List[torch.Tensor]): [description] Returns: Tuple[Tuple[torch.Tensor]]: [description] """ return tuple(zip(*batch))
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def ts_gsmooth_line(ax,df,obsvar,modvar,start_date,end_date,L=50,region='',station='',sepvar='',sepvals=([]),lname='',sepunits='', ocols=('blue','darkviolet','teal','green','deepskyblue'), mcols=('fuchsia','firebrick','orange','darkgoldenrod','maroon'),labels=''): """ Plots the daily avera...
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from datetime import datetime def get_current_timestamp(): """ Get current datetime as formatted string @return: """ now = datetime.now() return now.strftime("%d-%m-%Y %H:%M:%S")
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def add(x, y): """Add Function""" return x + y
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def getServices(): """Return a list of service names from cuebot.""" return [service.name() for service in opencue.api.getDefaultServices()]
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def _build_biosample_embedded_list(): """ Helper function intended to be used to create the embedded list for biosample. All types should implement a function like this going forward. """ modification_embeds = DependencyEmbedder.embed_defaults_for_type(base_path='modifications', ...
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def permute_optimize_keys(fixed_letters, fixed_letter_indices, open_letter_indices, all_letters, keys, data_matrix, bigrams, bigram_frequencies, min_score=0, verbose=False): """ Find all permutations of letters, optimize layout, and generate output. """ ...
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def _get_upsampling_layer(upsampling_factor): """Creates layer for 2-D upsampling. :param upsampling_factor: Upsampling factor (integer >= 1). :return: layer_object: Instance of `keras.layers.Upsampling2D`. """ try: return keras.layers.UpSampling2D( size=(upsampling_factor, ups...
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def vizMatches(params1,angles1,params2,angles2,row_ind,col_ind,device): """ Method used to visualize matches from the assignment algorithm""" def vizWavelet(wavelet,mode): if mode =='fourier': x = np.fft.fftshift(wavelet.squeeze().cpu().detach().numpy()).real elif mode == 'real': ...
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def save_k8s_local_template_definition_as_metadata( client, catalog_name, catalog_item_name, template_definition, org_resource=None, org_name=None): """Save definitions of a templates in a catalog as metadata on the item. :param pyvcloud.vcd.Client client: A sys admin client to be used to ...
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import aiohttp async def get_board_dates( session: aiohttp.ClientSession, board: str = DEFAULT_BOARD, market: str = DEFAULT_MARKET, engine: str = DEFAULT_ENGINE, ) -> client.Table: """Получить интервал дат, доступных в истории для рынка по заданному режиму торгов. Описание запроса - https://i...
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def main(): """First function to be called""" # Clear the screen by using module function. clear_screen_module.clear_screen() # Print purpose of the script. print("This script will print * multiple times in single line.\n") print("The pattern is as below,\n") # Need to take upper limit as 6 ...
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def matrix_to_nt(seq_matrix): """converts back a matrix of integers into a list of nucleotide sequences.""" seq_list = [] for line in seq_matrix: seq_list.append("".join([num_to_nt[x] for x in line])) return seq_list
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def rs_direct_interpolation_pass2(*args): """ rs_direct_interpolation_pass2(int n_nodes, int Ap, int Aj, float Ax, int Sp, int Sj, float Sx, int splitting, int Bp, int Bj, float Bx) rs_direct_interpolation_pass2(int n_nodes, int Ap, int Aj, double Ax, int Sp, int Sj, double Sx, int ...
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def does_resource_exist(resource): """Use boto3 to check if a resource exists.""" try: resource.load() return True except botocore.exceptions.ClientError as e: if e.response['Error']['Code'] == 'ValidationError': return False else: raise e
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def get_fee_interactive(source_address, keys, destinations, redeem_script, input_txs): """ Returns a recommended transaction fee, given market fee data provided by the user interactively Because fees tend to be a function of transaction size, we build the transaction in order to recomend a fee. retu...
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def get_AUC_list(df_list, set): """ """ auc_list = [] for df in df_list: set_list = df.set.values scores = df.ad_score.values[set_list == set] labels = df.abnormal_XR.values[set_list == set] body_part = df.body_part.values[set_list == set] auc_list_tmp = [roc_auc...
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import torch def threshold_mask(weights, threshold): """Create a threshold mask for the provided parameter tensor using magnitude thresholding. Arguments: weights: a parameter tensor which should be pruned. threshold: the pruning threshold. Returns: prune_mask: The pruning mas...
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from typing import Union def get_object_from_hit(hit: Hit) -> Union[Chapter, Heading, SubHeading, Commodity]: """Returns the commodity object related to a hit.""" alias = get_alias_from_hit(hit) model_class = INDEX_TO_MODEL_CLASS_MAP[alias] try: model = model_class.objects.get( go...
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from typing import Tuple def indices(local_shape: Tuple): """ Returns arrays of shape local_shape storing the respctive column and row indices of each local matrix element within the mathematical matrix. Args: local_shape: Shape of the matrix block on each processor. Returns: rows, cols: The mathema...
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def sigmoid(attrs, in_xlayers): """ Return sigmoid registration information (shape) """ assert len(in_xlayers) == 1 shape = in_xlayers[0].shapes[:] return {'shape': shape}
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def getFlags(*args): """getFlags(ea_t ea) -> flags_t""" return _idaapi.getFlags(*args)
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def batch_rodrigues(theta): """computes rotation matrix for given angle (x, y, z) see equation 2 of SPML (http://files.is.tue.mpg.de/black/papers/SMPL2015.pdf) for more information about this implementation see (https://en.wikipedia.org/wiki/Rotation_matrix#Rotation_matrix_from_axis_and_angl...
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def cuboid() -> PointGroup: """Symmetry group of a cuboid with edges aligned with the Cartesian axes.""" return Dh(2)
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def search(request, query): """ search for a reference """ if request.method == "POST": query = request.POST.get('q') return redirect('/references/search/' + str(query)) refs = References.objects.filter(title__icontains=query).values_list('id', 'title').order_by('title') return render(r...
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def classify(dataset,classifier,feat_mask=None): """ Performs a standard classification test with the given classifier. Parameters ---------- dataset : TextDataset TextDataset with train/val/test splits. classifier : object Classifier must have fit(X,y) & predict(X) methods. ...
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async def async_unload_entry(hass: HomeAssistantType, config_entry: config_entries.ConfigEntry) -> bool: """Unload Mosenergosbyt entry""" log_prefix = _make_log_prefix(config_entry, 'setup') entry_id = config_entry.entry_id unload_ok = await hass.config_entries.async_forward_entry_unload( confi...
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import torch def roc_auc_score(y_pred, y_true): """ Computes the area under the ROC curve. Parameters ---------- y_pred: torch.FloatTensor [N] The (binary) predictions made by the model. y_true: torch.LongTensor [N] The actual classes. Returns ------- torch.FloatT...
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from uroborosqlfmt.sql import MergeUpdateInsertClause def is_mergeupdateinsertclause(token): """ MERGEの内のDML判定 """ return isinstance(token, MergeUpdateInsertClause)
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import tqdm def filterCellBCs(moleculetable, outputdir, umiCountThresh = 10, verbose=True): """ Filter out cell barcodes thmt have too few UMIs :param moleculetable: allele table :param outputdir: file pmth to output directory :return: filtered allele table, cellBC to number umis mapping """ ...
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def sampled_places(block_size, length): """returns randomly sampled positions with block_size to make a new vector with length """ # Main condition is to identify when a draw would run off end, we want to # draw from beginning num_seg, remainder = divmod(length, block_size) vector = range(le...
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def is_too_large(usr_file: str) -> bool: """ Return True is the file is higher than the max allowed, False otherwise. :param usr_file: (str) path of user file :return: (bool) """ if usr_file.file_size >= MAX_FILESIZE_DOWNLOAD: return True else: return False
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from typing import Union def gamerule(self: Client, rule: str, value: Union[bool, int] = None) -> str: """Sets or queries a game rule value.""" return self.run('gamerule', rule, value)
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def get_answer(file_answer): """ """ with open(file_answer, 'r') as f: return [x.split(';')[0].rstrip() for x in f.readlines()]
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def feature_selection_chi2(vectorizer, X_train, y_train, X_test, k=5000): """feature selection based on chi2 """ feature_names = vectorizer.get_feature_names() # Feature reduction with Kbest features based on chi2 score ch2 = SelectKBest(chi2, k=k) X_train = ch2.fit_transform(X_train, y_train) ...
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def effectivepotential_plus(S, J, r, q, chi1, chi2): """ Upper effective potential. Call ---- chieff = effectivepotential_plus(S,J,r,q,chi1,chi2) Parameters ---------- S: float Magnitude of the total spin. J: float Magnitude of the total angular momentum. r: flo...
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def atom_to_move(o, p): """ Return the coordinates xyz of an atom just above acceptor/donor atom o """ # It will not work if there is just one dimension p = np.atleast_2d(p) return o + normalize(-1. * vector(o, np.mean(p, axis=0)))
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def string_is_yes(string, default=None): """ Mapping of a given string to a boolean. If it is empty or None (evaluates to False), and `default` is set, `default` is returned. If the lowercase of the string is any of ['y', '1', 'yes', 'true', 'ja'], it will return `True`. Else it will return `False`...
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def bi_count_helper(df, i, j): """ tools for multy thread bi_count """ df['bicount_{}_{}'.format(i,j)] = df.groupby([i,j])[i].transform('count') return df[['bicount_{}_{}'.format(i,j)]].fillna(-99999).astype(np.int32)
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from typing import Counter def ld0230(coord: np.ndarray, weights: np.ndarray, count: Counter): """Get 230 point angular Lebedev-Laikov grid.""" v = -0.5522639919727325e-1 genOh1(count, coord, weights, v) v = 0.4450274607445226e-2 genOh3(count, coord, weights, v) a = 0.4492044687397611e0 v...
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import json def get_target_assays(identifier, identifier_type, attempts=10): """ Get assay ids and name for a given target Parameters ---------- identifier : str Identifier of the target. Can be GI, Gene ID, or gene symbol. identifer_type : {"genesymbol", "geneid", "g...
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def new_show_result_21(img, result, class_names, score_thr=0.3, mask_index = 5): """Visualize the detection results on the image. Args: img (str or np.ndarray): Image filename or loaded image. result (tuple[list] or list): The detection result, can be either (bbox, segm) or just bbo...
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def default_cards_encoding() -> Feature: """ Default encoder for the card-level features. Encodes a `Player`. """ return CombinedFeature([ ListOfFeatures( lambda player: [LocatedCard(card, CardLocation.STORE) for card in player.store], default_card_encoding(), MAX_EN...
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def look_and_say(string): """ Expand a string of digits according to look-and-say process in the problem. Keyword arguments: string --- a string to be processed """ result = "" last = "" count = 0 for digit in string: if digit != last: if(count): result += str(count) + last l...
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def patchDefaultDelim(st:str): """ :param s: - if not None, returns self - else returns the default delimiter in :attr:`~k1lib.settings`""" return settings.defaultDelim if st is None else st
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def check_random_transform_ops(method): """Wrapper method to check the parameters of RandomChoice, RandomApply and Compose.""" @wraps(method) def new_method(self, *args, **kwargs): arg_list, _ = parse_user_args(method, *args, **kwargs) type_check(arg_list[0], (list,), "op_list") if ...
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