content
stringlengths
35
762k
sha1
stringlengths
40
40
id
int64
0
3.66M
def rankhist(X_f, X_o, X_min=None, normalize=True): """Compute a rank histogram counts and optionally normalize the histogram. Parameters ---------- X_f: array-like Array of shape (k,m,n,...) containing the values from an ensemble forecast of k members with shape (m,n,...). X_o: arr...
91c60cdcd6b046a43fca6502ae83d8bba90e6569
37,950
def build_data_sampler(config, dataset): """Returns a data sampler object of :class:`colossalai.nn.data.sampler.BaseSampler` constructed from `config`. Args: config (dict or :class:`colossalai.context.Config`): A python dict or a :class:`colossalai.context.Config` object containing info...
1afcf7dc176eba096dda3ca998f1cc075269e321
37,951
def to_kwargs(triangles): """ Convert a list of triangles to the kwargs for the Trimesh constructor. Parameters --------- triangles: (n,3,3) float, triangles in space Returns --------- kwargs: dict, with keys: 'vertices' : (n,3) float 'faces' : ...
067afee9f1d848893198c94a9caef93a2667978a
37,952
def get_model_field(model, name): """ Gets a field from a Django model. :param model: A Django model, this should be the class itself. :param name: A Django model's field. :return: The field from the model, a subclass of django.db.models.Model """ return model._meta.get_field(name)
e0f692aff82c20c7817d7de5d1fbeec1b69d3a3d
37,953
from scipy.stats.mstats import trimmed_mean, trimmed_std def get_clean_sample_mask(log_mah_fit, logmp_sample, it_min, lim=0.01, z_cut=3): """Calculate mask to remove halos with outlier MAH behavior. Parameters ---------- log_mah_fit : ndarray of shape (n_halos, n_times) logmp_sample : float ...
d1c2e530c0e0feb14061a71c7cf71dcb8d1724d7
37,954
def inert_masses(m_1, H, z_m, E_1): """First stage inert masses. Arguments: m_1 (scalar): First stage wet mass [units: kilogram]. H (scalar): Fraction of the recovery vehicle dry mass which is added recovery hardware [units: dimensionless]. z_m (scalar): Fraction of baseline...
5698fcb36ef1f532cc8bc1dc0c86a25adc5bcab8
37,956
def _grid_mapping(pollon, pollat, mapping_name=None): """creates a grid mapping DataArray object""" if mapping_name is None: mapping_name = cf.DEFAULT_MAPPING_NCVAR da = xr.DataArray(np.zeros((), dtype=np.int32)) attrs = cf.mapping.copy() attrs["grid_north_pole_longitude"] = pollon attrs...
4a7478ee0ca612158b4eb3e5b83de511acf3b978
37,957
def retrieve_employees(page=1): """ Handle requests to the /employees/<int:page> route - @roles_required(xxx) Retrieve all employee from the DB ordered by the First Name with the pagination support Filter employees based on specified start date and end date """ employees_per_page = 7 employ...
62cead2fcd605c8d884771ac0681e574db25b4b7
37,958
def __virtual__(): """ Confine this module to yum based systems """ if __opts__.get("yum_provider") == "yumpkg_api": return (False, "Module yumpkg: yumpkg_api provider not available") try: os_grain = __grains__["os"].lower() os_family = __grains__["os_family"].lower() exc...
67daa8e6afdd95d6c2ffa0589579b22494869c94
37,959
def get_update_message(new_version, info_url): """Return a string suitable for notifying users about the status of their update check. NEW_VERSION and INFO_URL generally come directly from a call to update_check().""" if new_version is None: return (f'You are running the latest version ({__ver...
cfe8010e02d1a0f770e17c4615b737a42a98530f
37,960
def str_url_encode(text): """ Encode package before send to Telegram API. :param text: string. :return: string. """ return quote(text)
4c195f7df7830119277dfd6d5bb00ad9ffebdc6a
37,961
from typing import Any def block(func: AnyCallable, *args: Any, **kwargs: Any) -> Any: """ Run a function in a blocking manner, whether the function is async or blocking. Args: func - the function (async or blocking) to run args - the args to run the function with kwargs - the kwa...
dce4632e64f45106b66206bb7c5eca5ccdfc8335
37,962
def input(msg="", default="", title="Lackey Input", hidden=False): """ Creates an input dialog with the specified message and default text. If `hidden`, creates a password dialog instead. Returns the entered value. """ root = tk.Tk() input_text = tk.StringVar() input_text.set(default) PopupInpu...
25570f21f266a92b9e2291d7c6d8338e0a242e66
37,963
def commnets(milestone): """Filtrira milestone tako da nadje samo broj komentara za svaki pojedinacni""" comments = milestone.event_set.filter(event_kind="K") size = comments.count() return size
9c3654911fe993c359bc593433b6fde1c467a504
37,964
import six def finish_login(request): """Complete OpenID Login Process""" response = _finish_verification(request) if not response: # Verification failed, redirect to login page. return redirect(request, 'mediagoblin.plugins.openid.login') # Verification was successfull query = O...
e3ceefa6ae768f8aba2e26970a39b2daf037a5c9
37,965
import re def check_tweet_emphasis(tweet): """ Performs check whether words in a tweet have 3 or more repeating characters. If the word has 3 or more repeating characters, word will be replaced by one that matches the original word as close as possible repeated twice, otherwise original wor...
fa14474733f684767bb52c66a0d7da3ffcd0d010
37,966
def buildList(pdList, matrix): """Takes a list of primary datasets (PDs) and the AlCaRecoMatrix (a dictinary) and returns a string with all the AlCaRecos for the selected PDs separated by the '+' character without duplicates.""" alCaRecoList = [] for pd in pdList: alCaRecoList.extend(matrix[pd].spli...
7e9351f115aac1064068e16f12276ed5506217e4
37,967
import random def random_wish(rankings): """ Select a wish randomly with exponential decay :param rankings: ordered [(pitch, role)] :return: i the index of the chosen wish in the rankings """ cum_weights = exp_cum(len(rankings)) total = cum_weights[-1] hi = len(cum_weights) - 1 ret...
9f229d9478655dedc7f8c63a39e0140f3a6884a8
37,968
def serialize_to_database(obj): """JSON serializer for objects not serializable by default json code""" if isinstance(obj, date): return str(obj.isoformat()) if isinstance(obj, (DateRange, DateTimeRange)): return f"[{obj.lower}, {obj.upper}]" return obj
a537ac8096e6d7955608887c7c7c08ece9467092
37,969
def _flatten_dict_into_array(dictionary, dtype=np.float32): """ Flatten the given dictionary into an array of scalars, and return the beginning index of each sequence of values. Parameters ---------- dictionary : dict Some dictionary containing scalars or array of scalars as each of its key...
e4390204b1a64adac8b0788f9d5f3ec646cf1850
37,970
def DecoderBlock(d_model, d_ff, n_heads, dropout, mode, ff_activation): """Returns a list of layers that implements a Transformer decoder block. The input is an activation tensor. Args: d_model (int): depth of embedding. d_ff (int): depth of feed-forward layer. n_...
9b5b4678ac988714e1d3af96c0dfb9ff43847c03
37,971
def get_gradient(pixels,processing = 'normalize'): """returns the gradient of an image, and does basic preprocessing""" horgradient = ndimage.sobel(pixels, axis = 1) vergradient = ndimage.sobel(pixels, axis = 0) gradient = np.array((vergradient,horgradient)) if processing == 'normalize': "...
d05f562b54fb2800fa1eb1a97d6373912906e40c
37,972
def get_roommates(): """Endpoint to get all rooms for the given search conditions.""" LOGGER.info(' Inside /api/getRoommates') roommates_list = userscontroller.get_all_roommates("") return roommates_list
35c9ade000f2bd07dddc78cd0d9f0c24ea3516cb
37,973
def log_mean_temp_diff(T_A_one, T_A_two, T_B_one, T_B_two): """ Calculate the logarithmic mean temperature difference (LMTD) of two fluid streams `one` and `two` of a heat exchanger with two ends `A` and `B`. Parameters: ----------- T_A_one : float, int, np.array Fluid temperature of st...
63e683186ba0644222c5406807c605be662cfc40
37,974
from typing import Dict from typing import Any from typing import Optional def trade_from_coinbase(raw_trade: Dict[str, Any]) -> Optional[Trade]: """Turns a coinbase transaction into a rotkehlchen Trade. https://developers.coinbase.com/api/v2?python#buys If the coinbase transaction is not a trade related...
930db004948e3f73fb423a6920c4e7c87ccf1988
37,975
def infected(): """ Real Name: b'Infected' Original Eqn: b'INTEG ( Infection Rate-recovery rate, 1)' Units: b'Person' Limits: (None, None) Type: component b'' """ return _integ_infected()
5bab3a7b2be75fca2e1ef8dc15b1dc0ef681aee3
37,977
from typing import Optional def get_dataproc_cluster(cluster_id: Optional[str] = None, name: Optional[str] = None, opts: Optional[pulumi.InvokeOptions] = None) -> AwaitableGetDataprocClusterResult: """ Get information about a Yandex Data Proc cluster. For more...
a43b7db12fd88315ad28adb412dd18b915c9864d
37,978
import ctypes def GetNumberPreAmpGains(LR: ctypes, error: Error=default) -> tuple: """ Returns tuple(MsgError type, number) """ if not error['status']: n = ctypes.c_int32(0) number= ctypes.pointer(n) executed = LR.GetNumberPreAmpGains(number) return errorcodehandler(ex...
5e30aa344860eb89d6ed112a1a283aa5f439eec0
37,979
from typing import List def ele2json(data: list) -> List[str]: """把元素为dict类型的list数据,转为,元素为json字符串的list数据 Args: data: list类型的数据,元素为dict类型 Returns: 转换后的list数据 """ return [dict2json(item) for item in data]
2fc4b1d6328fd1101f89a8fbc6e177e177f51207
37,981
def remove_small_components(mesh, min_volume=5e-05): """Removes all components with volume below the specified threshold.""" if mesh.is_empty: return mesh out = [m for m in mesh.split(only_watertight=False) if m.volume > min_volume] if not out: return mesh return trimesh.util.concatenate(out)
b2ec1f367a28aee505c569900edc035ded3e8331
37,982
def is_retriable(exception): """Returns True if this exception is retriable.""" errs = list(range(500, 505)) + [429] errs += [str(e) for e in errs] if isinstance(exception, HttpError): return exception.code in errs # https://cloud.google.com/storage/docs/key-terms#immutability if isinsta...
27d556924e521f970124e751144b5e2675d623f1
37,983
def parse_styles(cssfiles): """ Parse CSS files. This parse some CSS files and build a map of each attribute with these values. It's very useful to inline some CSS propety to html objects. :param cssfiles: A list of CSS files :type cssfiles: list :return: A map of C...
5193b3c672de6c434cc4475a4508ab2160aa4202
37,985
def sgld_gradient_update(step_size_fn, seed): """Optix implementation of the SGLD optimizer""" def init_fn(_): return OptixSGLDState(count=jnp.zeros([], jnp.int32), rng_key=jax.random.PRNGKey(seed)) def update_fn(updates, state, params=None): del params lr = step_size_fn(...
3b4c448027f0267082fd0d747e7280cbf348b79d
37,986
import re def _get_ip_addr_num(file_path): """Get the next IPADDR index num to use for adding an ip addr to an ifcfg file. """ num = '' with open(file_path, 'r') as f: data = f.read() data = data.splitlines() for line in data: found = re.search(r'IPADDR(\d?)=', line) ...
09dfd6bc8a9da240d3044bd6f5b974c69cbebf76
37,987
def subsample(X, subsample=1, seed=0): """Subsample a fraction of 1/subsample samples from the rows of X. Parameters ---------- X : np.ndarray Data array. subsample : int 1/subsample is the fraction of data sampled, n = X.shape[0]/subsample. seed : int Seed for sampling....
2ce66b67b771bb5f7ab60d8b318cff732c292a66
37,988
def norm(collection: str, country_code: str, name: str, lang: str = DEFAULT_LANG) -> str: """Normalize the name with respect to a collection and country code. >>> norm(CITY, 'RU', 'leningrad') 'Saint Petersburg' >>> norm(CITY, 'RU', 'peterburg') 'Saint Petersburg' >>> norm(CITY, 'RU', 'peterbur...
925e8993dea77d88180c13ce3af42e90c80b49cb
37,989
def createFeatureDF(pairs, classes, knownDrugDisease, drugDFs, diseaseDFs): """Create the features dataframes. :param pairs: Generated pairs :param classes: Classes corresponding to the pairs :param knownDrugDisease: Known drug-disease associations :param drugDFs: Drug dataframes :param disease...
bf36f8cc23d50d553d00e419b781fa0d55bca029
37,990
def getBigram(words, join_string): """ Input: a list of words, e.g., ['I', 'am', 'Denny'] Output: a list of bigram, e.g., ['I_am', 'am_Denny'] I use _ as join_string for this example. """ assert type(words) == list L = len(words) if L > 1: lst = [] for i in range(L-1): ...
07c0c421b6d5530059fc06e49b338f1984a445f8
37,991
def get_xqueue_callback_url_prefix(request): """ Calculates default prefix based on request, but allows override via settings This is separated from get_module_for_descriptor so that it can be called by the LMS before submitting background tasks to run. The xqueue callbacks should go back to the L...
b4301e623eb3886d76430289473aea3288511241
37,992
def abi_extensions(): """List with all the ABINIT extensions that are registered.""" return list(_EXT2VARS.keys())[:]
41b47b2c96e65c3af3ab15a7ad4cddb3213c3a1c
37,993
import glob def load_csvs(): """Returns dataframe containing all CSV files from directory 'cache' and returns a list of the filepaths. """ path = 'cache' csv_list = glob.glob(path + "/*.csv") # collect all filepaths df = pd.concat((pd.read_csv(f, index_col=0) for f in csv_list)) # concatenate all...
648e0819ed696024f2dd2dd9f7bbd05faf0c25f9
37,994
def merge_networks_from_tags(shape, props, fid, zoom): """ Take the network and ref tags from the feature and, if they both exist, add them to the mz_networks list. This is to make handling of networks and refs more consistent across elements. """ network = props.get('network') ref = props....
f8d4f764f885c8db7c920169d65126a783f6c1ee
37,995
def tabs(text: str) -> str: """Remove tabs. If you want to replace tabs with a single space, use `normalize.whitespace()` instead. Args: text (str): The text from which tabs will be removed. Returns: The stripped text. """ return resources.RE_TAB.sub("", text)
494216fa8ad5570604a69c8c37e94797b268381a
37,996
from numpy import nan def tobool(value): """Convert value to boolean or Not a Number if not possible""" if value is None: value = nan else: value = bool(value) return value
9517d817381111c55e73e03256d516ccbbd940a2
37,997
import json import collections def load_synonyms(synonym_filepath=None): """Loads synonym dictionary. Returns as defaultdict(list).""" with tf.gfile.Open(synonym_filepath) as f: synonyms = json.load(f) synonyms_ = collections.defaultdict(list) synonyms_.update(synonyms) return synonyms_
2d98df5edf7b116a7807851db234dfa322da9a99
37,998
def get_table_code(sol, table_name, unused_options): """ Gets the table code of a given parameter. For example, the DISPLACMENT(PLOT,POST)=ALL makes an OUGV1 table and stores the displacement. This has an OP2 table code of 1, unless you're running a modal solution, in which case it makes an OUGV1 ...
d9840f55260b92f704160906cfb65baa678881ff
37,999
def wfFormIndex(text, lang, lowercase = True, contract = True, stopWords = False): """Returns the Formality Score of a text. This function returns a value based on the weight that each kind of word (adjective, noun, pronoun, etc.) has within the text. """ diffWords = stats.wordClass(text,...
400cf83f5ea7eec82a9db8dd7ddfb6d9c35c23d8
38,000
def showtables(hcaturi, dbname='default', username='hdfs'): """ hcat.showtables Args: hcaturi (str): uri for webhcat host, eg hive.myorg.com:50111 dbname (Optional[str]): database name, defaults to 'default' username (Optional[str]): user name defaults to hdfs Returns: list: list of available tables for t...
c5c577068882813fb4b7ff7f32da3dab4cbad6a9
38,002
def fourier_gaussian(input, sigma, n = -1, axis = -1, output = None): """Multi-dimensional Gaussian fourier filter. The array is multiplied with the fourier transform of a Gaussian kernel. If the parameter n is negative, then the input is assumed to be the result of a complex fft. If n is larger or eq...
c71f7ede1be4a36b4ef17ce2744eff3b28ebbb67
38,004
def amplitude_kurtosis(data): """ (list) -> float pass in an array or list and return the kurtosis value of data. Using Pearson's definition >signal_skewness([3,7,8,9,1]) 1.4904 """ return stats.kurtosis(data, fisher=False)
d2db4844a5af8f16ea185a77d6de2e9c4a3e96d9
38,005
import numba def mh_sample( logtarget, x0, sigma=None, discrete=None, args=(), n_burn=1000, n_steps=1000, tune_interval=100, variable_names=None, return_acceptance_rate=False, ): """ Parameters ---------- logtarget : function The function to compute the ...
2d17487960f8fd54f387044fb4ca4e652bf6faa5
38,006
from io import StringIO def load(data): """loads the given byte-string representation to an object""" stream = StringIO(data) return _load(stream)
0858e4ed8fd8631afbdb346e6733281b7893ce1b
38,007
import torch def drop_path(x, drop_prob: float = 0., training: bool = False): """ Obtained from: github.com:rwightman/pytorch-image-models Drop paths (Stochastic Depth) per sample (when applied in main path of residual blocks). This is the same as the Dro...
20c9321efd7763f8f6aa25b1e69c6db48dbf8a70
38,008
import json def get_db_object(db_name) -> object: """ :type db_name: object :return: pymongo client object """ db_handle = db_cache.get_db_cache(db_name) if not __is_empty(db_handle): __logger.info("sending db object from cache!") return db_handle else: __logger....
32fe6cd2577553e593eda6727913fcd324b5e89f
38,009
import torch def test_value_network(): """ Test if the CartPole value network is invariant """ network = BasisCartpoleNetworkWrapper(1, [64, 64]) layer = BasisCartpoleLayer(64, 1, out="invariant") representations = get_cartpole_state_group_representations() p_m2 = representations[1].deta...
dd9093ab1669ce82cc6cbbd3aa1718d50868f08b
38,010
def tokenize(obj, tokenizer, max_seq_len): """Recursively convert to tokens.""" if isinstance(obj, str): toks = tokenizer.convert_tokens_to_ids(tokenizer.tokenize(obj)[:max_seq_len]) assert all( [t < len(tokenizer.encoder) for t in toks] ) # all(toks < len(tokenizer.encoder)...
9e8ae8a4c1af0df29d95afcef183851792af2b43
38,011
def manifest_to_file_list(manifest_fn): """ Open a manifest file and read it into a list. Entries in the list are relative, i.e. no leading slash. manifest_fn -- the manifest file to read """ image_manifest_list = [] with open(manifest_fn) as image: image_manifest_list = [x[1:] ...
982f02e0b00fad20af8d50d44673d65d9bba5a37
38,013
import warnings def perform_climatology_esp( model_name, forecast_date, forecast_duration, workdir=None, **kwds ): """ This function takes the model setup and name as well as forecast data and duration and returns an ESP forecast netcdf. The data comes from the climatology data and thus there is a mec...
29a91ef8867fe361a5a640a648b5a0737fd5cc88
38,014
def get_fp(list_of_smi): """ Function to get fingerprint from a list of SMILES""" fingerprints = [] mols = [Chem.MolFromSmiles(x) for x in list_of_smi] # if rdkit can't compute the fingerprint on a SMILES # we remove that SMILES idx_to_remove = [] for idx,mol in enumerate(mols): try:...
1ff1541f7e50b01a1ab2332dca9fd6af8d7c6ddc
38,016
def intersect (sequence_a, sequence_b): """Return true if the two sequences contain items in common If sequence_a is a non-sequence then return false. """ try: for item in sequence_a: if item in sequence_b: return 1 except TypeError: return 0 return 0
f28c3b6258584fdc1821c65867b4d89a1c33373a
38,017
def compileOverlapData(uniA,uniB,sigA,sigB,chrList): """ Piles-up the overlap coverage data for the fisher exact test. :param uniA: Interval Universe A :param uniB: Interval Universe B :param sigA: Interval Significant A :param sigB: Interval Significant B :param chrList: List of chromosome...
10aade88348682e31ebffc3d435eb92db943eeb0
38,019
def get_location_dictionary(deployment): """ Construct location dictionary from ui deployment information. """ try: have_location_dict = False latitude = None longitude = None location = None depth = None orbitRadius = None if 'depth' in deployment: ...
3c2b00c97c681d89628ca8c6708545b73bf84649
38,020
def __insert_color(txt,s,c): """insert HTML span style into txt. The span will change the color of the text located between s[0] and s[1]: txt: txt to be modified s: span of where to insert tag c: color to set the span to""" return txt[:s[0]]+'<span style="color: {0};">'.format(c)+\ t...
013c011737f9b763aa8682a945883c934c99b5cd
38,021
def legacy_do_linear_gst(dataFilenameOrSet, targetModelFilenameOrObj, prepStrsListOrFilename, effectStrsListOrFilename, gaugeOptParams=None, advancedOptions=None, comm=None, memLimit=None, output_pkl=None, verbosity=2): """ Perform Linea...
cfedd3db88329a815ed1fb0ea5ab4a7de99f8931
38,022
def StopAddHeaders(builder, headers): """This method is deprecated. Please switch to AddHeaders.""" return AddHeaders(builder, headers)
b849725aae10132d5b41f316643cdc75a35c2d70
38,023
from typing import List def select_dominoes(dominoes: List[str], order: int, num_players: int) -> str: """Randonly generate a set of dominoes for a player - If the number of players is 3, each player gets 9 dominoes, plus a 10th dominoe that is to be played first (all players will get it) - If the num...
c96d1a5b54e3623807ca57a3684f63fa3ff6737c
38,024
def fspecial_average(hsize=3): """Smoothing filter""" return np.ones((hsize, hsize))/hsize**2
ba095b58c994a1b12646093ebc05cd49b2854143
38,025
from typing import Union from typing import List from typing import Optional async def getTwitchChannelUsers(cls:"PhaazebotTwitch", **search) -> Union[List[TwitchUserStats], int]: """ Get channel levels and stats. Returns a list of TwitchUserStats(). Optional 'search' keywords: --------------------------- * `u...
cf4c1e3ac2c8b3399ac64a41dcfc52cceb187067
38,026
def normalize_times(times, events): """Given a list of times and event ids, normalize the times (i.e. calculate the time since the start of each event). :param times: list of times :type times: list :param events: list of event ids :type events: list :return: list of normalized times :...
97a65dcd3fffcb8f9d686649e31a579ff104eb64
38,027
import hashlib import hmac def salted_hmac(key_salt, value, secret): """ Return the HMAC-SHA1 of 'value', using a key generated from key_salt and a secret. A different key_salt should be passed in for every application of HMAC. """ assert secret, f"secret must be provided." key_salt = bytes(...
6b8a3cb4998f2c00d25ae1cee3f88bd39fabe6fe
38,028
import dis def _opcode(name): """Return the opcode by name from the dis module.""" return dis.opmap[name]
d2c8612138c94da68adcc1b8979395987090157c
38,029
def validate_compare_input(message): """ validate input for function that compare two songs :param message: message received by microservice :type message: `dict` :return: tuple with status and error message :rtype: `tuple` """ input_schema = { "type": "object", "require...
117fcbe275b795bacb82232c7a5ae10110b213a8
38,030
def _gcp_agent_singleton(**kwargs): """Manage singleton of agents to particular apis. This treates the agent instances as singletons based on their configuration. The reason for this is simply to reduce logging noise on the creation. This is possible since agents are stateless. Args: kargs: [kwarg...
1ec653d4de200070f2bf0b11d97b6ae713991e82
38,032
def get_media_playlist_uris(master_playlist, target_qualities): """From a master playlist, extract URIs of media playlists of interest. Returns {stream name: uri}. Note this is not a general method for all HLS streams, and makes twitch-specific assumptions, though we try to check and emit warnings if these assumpti...
1cb7302eb14c5b980e77a8a5907edb9cbcddb279
38,033
def layer_stack_from_hparams(hparams, prefix): """Create a layer stack based on the hyperparameter values.""" layers = hparams.get(prefix + "layers") return transformer.LayerStack( [layers_registry[l](hparams, prefix) for l in layers], dropout_rate=hparams.layer_prepostprocess_dropout, norm_epsi...
220d4f71a4e270985d6d7560719f7c7f83e99781
38,035
def resample_profile(profile, periods): """ Resamples a profile to have the number of periods defined by periods. Uses the mean of the period. The end point of the period is used as the index. Parameters ---------- profile : np.Array, pd.Series or pd.DataFrame An array like object ...
7cd49aeec0cf43b49c1e884483830fd9485d5202
38,036
def rs_compose_add(p1, p2): """ compute the composed sum ``prod(p2(x - beta) for beta root of p1)`` Examples ======== >>> from sympy.polys.domains import QQ >>> from sympy.polys.rings import ring >>> from sympy.polys.ring_series import rs_compose_add >>> R, x = ring('x', QQ) >>> f ...
c82c3c19087fea7230f20f0da14b4facce4b4a49
38,037
import re def remove_citation(paragraph: str) -> str: """Remove all citations (numbers in side square brackets) in paragraph""" return re.sub(r'\[\d+\]', '', paragraph)
dc88606e69187143d767215ddc098affdbd185d5
38,039
def parse_proxy(line): """Parses proxies from a string. Args: contents: The string that should be parsed. Returns: The parsed proxy. """ proxy = None if not (line.strip().startswith('#') or line.strip().startswith('//')): tokens = line.replace('\n', '').split(' ') try: ...
1a5583c689a6cd655265c308d3cfc9b84783f7aa
38,040
import ctypes def sg_get_pdt_str(pdt): """ Yield string associated with peripheral device type (pdt). Returns 'buff'. If 'pdt' out of range yields "bad pdt" string. """ buff = _get_buffer(48) libsgutils2.sg_get_pdt_str(pdt, 48, ctypes.byref(buff)) return buff.value.decode('utf-8')
4b1a45d43c3a848dfd814d18ade300712b081b28
38,041
def simulation_positions(simulation): """ Return atomic coordinates. Parameters ---------- simulation : Simulation or Context object. Returns ------- ndarray """ state = simulation_state(simulation, 'positions') return state.getPositions(asNumpy=True)
f83e042010b65bd9bfab150b90b5821c66b555e6
38,043
def regex(value, regexflags=None): """OpenEmbedded 'regex' type Acts as a regular expression, returning the pre-compiled regular expression pattern object. To use this type, set the variable type flag to 'regex', and optionally, set the 'regexflags' type to a space separated list of the flags to c...
18eea0ed097dc530f98fddd88816e133e8ef5e54
38,044
import torch def normalized_distance(x, y): """Distance between two vectors normalized by the number of elements and the norm of the first vector""" return distance(x, y) / torch.sqrt(norm(x) * norm(y))
846d176a5c536d93ef164a63b582fa541d304686
38,045
def lv_encode(data: bytes) -> bytes: """Encodes data as length-value""" return serialize_length(len(data)) + data
1858d3165c7fb714877be2c3448fe162678ceaa4
38,047
def get_model_field(model): """ get the verbose_name of all fields in the model """ field_dict = dict() for field in model._fields: attr = getattr(model, field) if hasattr(attr, 'verbose_name'): verbose_name = attr.verbose_name if verbose_name: field_d...
8ec9a4f9b571483c13d5a23330e98691279c12ad
38,049
from typing import Callable def _get_create_str_fn(opt: str) -> Callable: """ A tool function to create either a str or bytes from a 8-bit string. """ def _create_str_bytes(name: bytes) -> bytes: return name def _create_str_str(name: bytes) -> str: return name.decode("latin-1") if op...
fab4e8065cfc450eda5bcccdce1888941f2f7f25
38,050
def admin_required(func): """ This is a decorator that can be applied to a Controller method that needs to allow request to process only if checks are successful. It checks: - if the user is logged in (And) - if the user is an admin The current object is fetched using the Controller in...
a8d25f7c9b515c10b3fc71bd1b1819dbc2f37a8d
38,051
def get_expected_tetranuc_freq(tetranuc, trinuc_freqs, dinuc_freqs): """ Returns the expected frequency for the given tetranucleotide. Args: tetranuc: trinuc_freqs: dinuc_freqs: Returns: """ # get prefix of len 3 of tetranucleotide (n1n2n3) first3bases = tetranuc[:3] ...
35c99fa43e771bb5744aa0dd0f2877bcacc7e478
38,052
import math def computeLengthsAndAngles(periodicBoxVectors): """Convert periodic box vectors to lengths and angles. Lengths are returned in nanometers and angles in radians. """ if is_quantity(periodicBoxVectors): (a, b, c) = periodicBoxVectors.value_in_unit(nanometers) else: a, b...
a18601a111b1ef624e828e87dd4b0ddb1fa44e76
38,053
def compute_info( image ): """ Compute information on resampled and original images """ old_size, old_spac, old_orig = image.GetSize(), image.GetSpacing(), \ image.GetOrigin() new_size, new_spac, new_orig = [], [], old_orig for i in range(len(old_size)): new_size.append( int(np.ceil( 1...
3989149b2bbeb89ffea62ec13161f10c00b285d5
38,054
def macro_EmbedObject(macro, target=wikiutil.required_arg(unicode), pagename=None, width=wikiutil.UnitArgument(None, float, ['px', 'em', 'pt', 'in', 'mm', '%'], defaultunit='px'), height=wikiutil.UnitArgument(None, float, ['px', 'em', 'pt', 'in', 'mm', '%'], defaultunit='px')...
0c69842efcd1cb9240053fca9c291be0fa5eeaa5
38,055
def lnprior(theta, y, lower_t_bound, upper_t_bound, transit_params, skip_priors): """ Log prior for `emcee` runs. Parameters ---------- theta : list Fitting parameters y : `numpy.ndarray` Fluxes lower_t_bound : float Earliest in-transit time [JD] uppe...
5a35211e8a0138757ad490fa77f31e515ec69181
38,056
def job_metadata_filename(metadata): """Construct relative filename to job metadata.""" return "data/{metadata}".format(metadata=metadata)
bb5e8dc6c0ec50fed6801b9c67f8234d9115372a
38,057
def get_db_cols(cur, table_name, schema='public', type_map=True): """ Gets the column names of a given table if type_map is true, returns also a dictionary mapping each column name to the corresponding postgres column type """ db_cols_sql = """SELECT column_name, data_type FROM in...
936952ea0bbc0c165f089e700828ea876d30ec16
38,058
def wrap_elemwise(func, **kwargs): """ Wrap up numpy function into dask.array """ f = partial(elemwise, func, **kwargs) f.__doc__ = func.__doc__ f.__name__ = func.__name__ return f
ae480423fba7e1c01a41de5e4b61c629439dd1e5
38,059
def parse_player_node(player_node): """Parses a player XML node Parameters ---------- player_node : lxml node The player node to parse Returns ------- A Player database object """ db_player = Player(player_id=player_node.get('id'), first=player_node.g...
e69dd475cdfc9ff4017a0c76b0387a959f25a590
38,060
import six def is_fits(input, **kwargs): """ Determine whether input is in FITS format """ if isinstance(input, six.string_types): if input.lower().endswith(('.fits', '.fits.gz', '.fit', '.fit.gz', '.fits.Z', '.fit.Z')): ...
e504fac14f3fe4d470bd84a600e622abc17da609
38,061
def calc_moverscore(gold_references, model_generations, n_gram=2, batch_size=16): """ Calculate MoverScore :param gold_references: list of target sections :param model_generations: list of generated sections :param n_gram: unigram-based MoverScore (n-gram=1), bigram-based MoverScore (n-gram=2) ...
b4deaaf8a0a1c79dee00c5c920b0d832e7f2545a
38,062
def base62_encode(raw_bytes): """ Encodes raw bytes into base-62 representation. URL-safe and human safe. Encode your Unicode strings to a byte encoding before base-62-encoding them. Convenience wrapper for consistency. :param raw_bytes: Bytes to encode. :returns: Base-62 encoded bytes. "...
020a0746088902d87a217b0771096e9e41c89dbf
38,063
import torch def cmc_score_count( distances: torch.Tensor, conformity_matrix: torch.Tensor, topk: int = 1, ) -> float: """ Function to count CMC from distance matrix and conformity matrix. Args: distances: distance matrix shape of (n_embeddings_x, n_embeddings_y) conformity_matrix: bi...
14519d349a55f3b5ea6f87f830af183441b86573
38,064