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from typing import Optional def get_table(id: Optional[str] = None, opts: Optional[pulumi.InvokeOptions] = None) -> AwaitableGetTableResult: """ Resource Type definition for AWS::DynamoDB::Table """ __args__ = dict() __args__['id'] = id if opts is None: opts = pulumi.Invo...
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def load_perezfornos2012(shuffle=False, subjects=None, figures=None, random_state=0): """Load data from [PerezFornos2012]_ Load the brightness associated with joystick position data described in [PerezFornos2012]_. Datapoints were extracted from Figures 3-7 of the paper. ...
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def setup_Component_with_parameters(): """ Sets up a Component with parameters and all options used. """ comp = setup_Component_all_keywords() comp._unfreeze() # Need to set up attribute parameters comp.new_par1 = 1.5 comp.new_par2 = 3 comp.new_par3 = None comp.this_par = "test...
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def dpuSetTaskPriority(task, priority): """ Set the priority of one DPU task. Priority range is 0 to 15, 0 has the highest priority. The priority of the task when it was created defaults to 15. """ return pyc_libn2cube.pyc_dpuSetTaskPriority(task, c_int(priority))
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def find_std(arr): """ This function determines the standard deviation of the given array. Args: arr = numpy array for which the standard deviation and means are to be determined Returns: std = standard deviation of the given array mean = mean value of the given array Usage...
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import math def process(frame: np.ndarray, mask: np.ndarray = None, hsv: np.ndarray = None, *, lower=(20, 100, 100), upper=(35, 255, 255), min_area_prop=1/64, focal_length=208.5): """Find cubes using our vision algorithm. Args ---- frame: the image to process mask: optiona...
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def required_daemons(instance): """ Return which daemon types are required by the instance """ daemons = [DaemonType.SENSOR] if isinstance(instance.scheduler, DagsterDaemonScheduler): daemons.append(DaemonType.SCHEDULER) if isinstance(instance.run_coordinator, QueuedRunCoordinator): ...
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import six def SplitDictOfTensors(t_dict, num_splits): """Splits tensors in `t_dict` evenly into `num_splits` along the 1st dimenion. Args: t_dict: A dictionary of tensors. Each tensor's 1st dimension is the same size. num_splits: A python integer. Returns: A list of dictionaries of tensors,...
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def add_gradient_noise(t, stddev=1e-3, name=None): """ Adds gradient noise as described in http://arxiv.org/abs/1511.06807 [2]. The input Tensor `t` should be a gradient. The output will be `t` + gaussian noise. 0.001 was said to be a good fixed value for memory networks [2]. """ with tf.name_scope(values...
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from typing import Any def find_entering_variable( tableau: npt.NDArray, pivot_row_index: int, non_basic_variables: set ) -> Any: """ Finds the non-basic variable which becomes basic after pivoting Parameters ---------- tableau : array A tableau corresponding to a vertex of a Polytope...
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def activity_final(self): """Find or create a final node in a Activity Note that while UML allows multiple final nodes, use of this routine assumes a single is sufficient. :return: FinalNode for Activity """ final = [a for a in self.nodes if isinstance(a, FinalNode)] if not final: self....
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def contar_caracteres(s): """ FUNÇÃO QUE CONTA OS CARACTERES DE UMA STRING :param s: string a ser contada """ num_of_caracteres = {} for caracter in s: num_of_caracteres[caracter] = (num_of_caracteres.get(caracter, 0) + 1) return num_of_caracteres
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def parse_symmetric_morlet_single_scale_parameters( parameter_map ): """ Parses parameters for the single scale, symmetric Morlet wavelet generator. Takes a dictionary of (key, string value)'s and casts the values to the types expected by get_symmetric_morlet_single_scale_transform(). The following...
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from typing import Union from typing import Iterator from typing import Optional from typing import List def keep_protein_class(data: Union[pd.DataFrame, PandasTextFileReader, Iterator], protein_data: pd.DataFrame, classes: Optional[Union[dict, List[dict]]] = [{'l2': 'Kinase'}, {'l5': 'Adenosin...
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import types def load_embeddings(env_config): """Attempt to loads user and movie embeddings from a json or pickle file. Args: env_config: `EnvConfig` class from movie_lens_simulator.py Returns: embedding_dict containing embeddings for movies and users """ path = env_config.embeddings_path embedd...
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def find_one_file(directory, pattern): """ Use :func:`find_files()` to find a file and make sure a single file is matched. :param directory: The pathname of the directory to be searched (a string). :param pattern: The filename pattern to match (a string). :returns: The matched pathname (a string). ...
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def image_hosting(): """ 图床 """ # from app.util import file_list_qiniu # imgs = file_list_qiniu() page = request.args.get('page',1, type=int) imgs = Picture.query.order_by(Picture.id.desc()). \ paginate(page, per_page=20, error_out=False) return render_template('admin/image_hosti...
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def get_domain_ip(domain): """ Get the IP for the domain. Any IP that responded is good enough. """ if domain.canonical.ip is not None: return domain.canonical.ip if domain.https.ip is not None: return domain.https.ip if domain.httpswww.ip is not None: return domain.http...
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def create_frame(i): """Helper function to create snapshot objects.""" snap = gsd.hoomd.Snapshot() snap.configuration.step = i + 1 return snap
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import torch def BPR_Loss(positive : torch.Tensor, negative : torch.Tensor) -> torch.Tensor: """ Given postive and negative examples, compute Bayesian Personalized ranking loss """ distances = positive - negative loss = - torch.sum(torch.log(torch.sigmoid(distances)), 0, keepdim=True) return ...
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def gen_segment(curr_img, curr_predictor, try_bools = [False, False], out_trk = None): """Apply different methods (see try_bools) iteratively to try to segment a single shot (non-ALC) image. Because image source is not a mosaic, extent jittering (zooming in and out) is ...
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import urllib def query(url): """Send the query url and return the DOM Exception is raised if there is errors""" u = urllib.FancyURLopener(HTTP_PROXY) usock = u.open(url) dom = minidom.parse(usock) usock.close() errors = dom.getElementsByTagName('Error') if errors: e = buildException(errors) raise e r...
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def reshape_img(image): """ Reshape an image into the form (height, width, channels). :param image (np.array): Loaded image :return: reshaped (np.array): Reshaped image """ img = [] for i in range(3): img_c = np.reshape(image[channel * i:channel * (i + 1)], (image_size, image_size)...
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def set_levels(lst_all, lst_chiln, lng_level): """Top down recursive setting of nesting levels""" lng_next = lng_level + 1 for id_child in lst_chiln: dct_child = lst_all[id_child] dct_child[ATT_LEVEL] = lng_level lst_next = dct_child[ATT_CHILN] if lst_next: set_levels(lst_all, lst_next, lng_next) return...
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from tests.test_plugins.threads_plugin import ThreadPlugin def ThreadPlugin(): """ :return: thread plugin class """ return ThreadPlugin
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import math def get_distance(pos_1, pos_2): """Get the distance between two point Args: pos_1, pos_2: Coordinate tuples for both points. """ x1, y1 = pos_1 x2, y2 = pos_2 dx = x1 - x2 dy = y1 - y2 return math.hypot(dx, dy)
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import re def jsonContentCategories(): """ Parses the Google Cloud content categories from a local txt file and returns a nested dictionary (ugly, but effective). Returns: Dictionary -- Nested dictionary of content categories. """ f = open("google_content_categories.txt", "r") catArr...
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def makeFigure(): """ Makes figure 5. """ # Get list of axis objects ax, f = getSetup((10, 10), (4, 3)) figureMaker(ax, *commonAnalyze(list_of_populations, 2), num_lineages=num_lineages) subplotLabel(ax) return f
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def gauss2D_FIT(xy, x0, y0, sigma_x, sigma_y): """Version of gauss2D used for fitting (1 x_data input (xy) and flattened output). Returns the value of a gaussian at a 2D set of points for the given standard deviation with maximum normalized to 1. The Gaussian axes are assumed to be 90 degrees from each ...
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def insert_many(sql, *args): """ 执行SQL语句 :param sql: insert的SQL语句,可含? :param args: insert的SQL语句所对应的值 :return: 最后插入行的主键ID """ return _insert(sql, True, *args)
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def _sub_matches_cl(subs, state_expr, state): """ Checks whether any of the substitutions in subs will be applied to state_expr Arguments: subs: substitutions in tuple format state_expr: target symbolic expressions in which substitutions will be applied state: target symboli...
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def find_fxn(tu, fxn, call_graph): """ Looks up the dictionary associated with the function. :param tu: The translation unit in which to look for locals functions :param fxn: The function name :param call_graph: a object used to store information about each function :return: the dictionary for t...
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def _prepare_embeddings(h, m): """ Combine FCN outputs with segmentation masks to build a batch of mask-pooled hidden vectors. Represents the calculation of h_{m} in the first equation in Henaff et al's paper :h: batch of embeddings; (N,w,h,d) :m: batch of NORMALIZED segmentation tensors; ...
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def estimate_mode_width(distribution): """Estimate mode and width-at-half-maximum for a 1D distribution. Parameters ---------- distribution : array of int or float The input distribution. ``plt.plot(distribution)`` should look like a histogram. Returns ------- mode : int ...
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def agent_hostname_by_id(agent_id): """Given a agent_id provides the agent ip""" for agent in __get_all_agents(): if agent['id'] == agent_id: return agent['hostname'] return None
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def parse_tile_name(name: str): """ Parse the tile """ match = reTILE.match(name) if match is None: return None groups = match.groupdict() # type: Dict[str, Any] groups['tile'] = int(groups['tile']) return groups
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import urllib3 import re import urllib import json import time def query_object_elasticsearch(query_string, item_type="tor"): """Return a dict of Elasticsearch results.""" # make an http request to elasticsearch #pool = urllib3.HTTPSConnectionPool(settings.ELASTICSEARCH_HOST, # settings.ELASTIC...
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from typing import List def article_to_frequency(article: str) -> List[int]: """Convert an article or article description to a list of numbers. :param article: The article or article description :return: A list of numbers corresponding to the words """ numbers: List[int] = [0] * len(common_words)...
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def Date(default=None, validator=None, repr=False, eq=True, order=True, # NOQA converter=None, label=None, help=None,): # NOQA """ A date attribute. It always serializes to an ISO date string. Behavior is TBD and for now this is exactly a string. """ return String( default=defau...
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def jsonify_item(category_id, item_id): """Return an item information of a category in JSON""" try: item = db.session.query(Item).filter_by( category_id=category_id, id=item_id).one() return jsonify(Item=item.serialize) except Exception as e: abort(404)
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from typing import Union from typing import Tuple def parse(source: Union[str, bytes], fnam: str = None, errors: Errors = None, pyversion: Tuple[int, int] = defaults.PYTHON3_VERSION, custom_typing_module: str = None) -> MypyFile: """Parse a source file, without doing any semantic analysis. ...
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def encode_multipart_formdata(fields, files): #http://code.activestate.com/recipes/146306/ """ fields is a sequence of (name, value) elements for regular form fields. files is a sequence of (name, filename, value) elements for data to be uploaded as files Return (content_type, body) ready for httplib.HTTP instance...
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import re def ParseMaxRevision(revision_list): """Returns the max revision from a list of url@revision string.""" revision_re = re.compile(r'.*@(\d+)') def RevisionKey(revision): return revision_re.match(revision).group(1) max_revision = max(revision_list.split(), key=RevisionKey) return max_revision....
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from typing import List def get_resolv_conf_namservers() -> List[str]: """Return list of namserver IPs in /etc/resolv.conf.""" result = [] with open("/etc/resolv.conf") as f: for line in f: parts = line.lower().split() if len(parts) >= 2 and parts[0] == 'nameserver': ...
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import csv import codecs def import_gloss_csv(request): """ Check which objects exist and which not. Then show the user a list of glosses that will be added if user confirms. Store the glosses to be added into sessions. """ glosses_new = [] glosses_exists = [] # Make sure that the session ...
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import numpy def vis_timeslices(vis: Visibility, timeslice='auto') -> int: """ Calculate number of time slices in a visibility :param vis: Visibility :param timeslice: 'auto' or float (seconds) :return: Number of slices """ assert isinstance(vis, Visibility) or isinstance(vis, BlockVisibility...
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import torch def alexnet_metapoison(widths=[16, 32, 32, 64, 64], in_channels=3, num_classes=10, batchnorm=False): """AlexNet variant as used in MetaPoison.""" def convblock(width_in, width_out): if batchnorm: bn = torch.nn.BatchNorm2d(width_out) else: bn = torch.nn.Iden...
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def checksum(message): """ Calculate the GDB server protocol checksum of the message. The GDB server protocol uses a simple modulo 256 sum. """ check = 0 for c in message: check += ord(c) return check % 256
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import torch def sds_bmm_torch(s_t1, d_t2): """ bmm (Batch Matrix Matrix) for sparse x dense -> sparse. This function doesn't support gradient. And sparse tensors cannot accept gradient due to the limitation of torch implementation. with s_t1.shape = (b, x, s), d_t2.shape = (b, s, y), the output shape...
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def parse_report_filter_values(request, reports): """Given a dictionary of GET query parameters, return a dictionary mapping report names to a dictionary of filter values. Report filter parameters contain a | in the name. For example, request.GET might be { "crash_report|operating_...
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def generate_jwt(payload): """Encode given payload to jwt, return encoded jwt, private key, public key Args: payload (dict): the payload to be encoded in the jwt Returns: Encoded jwt(json), private key (str) used to encode the payload, public key(str) used to encode the payload """ ...
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def advantage_returns(rewards, values, gamma, lam): """Compute the advantage and returns from rewards and values.""" # GAE-Lambda advantage calculation. deltas = rewards[:-1] + gamma * values[1:] - values[:-1] advantages = discount(deltas, gamma * lam) # Compute rewards-to-go (targets for the value ...
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import itertools def iter_extend(iterable, length, obj=None): """Ensure that iterable is the specified length by extending with obj""" return itertools.islice(itertools.chain(iterable, itertools.repeat(obj)), length)
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def _ldap_search(cnx, filter_str, attributes, non_unique='raise'): """Helper function to perform the actual LDAP search @param cnx: The LDAP connection object @param filter_str: The LDAP filter string @param attributes: The LDAP attributes to fetch. This *must* include self.ldap_username @param non...
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import yaml def read_yaml(filename:str) -> dict: """ Return dic from yaml. Args: filename: Output file name. Returns: dict: Dictionary object. """ with open(filename, 'r') as f: dic = yaml.load(f, Loader=Loader) return dic
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import hashlib def download(id): """Serve the pickle file""" passwd = hashlib.sha256(ID.encode()).hexdigest() if id == passwd: return send_file("model.pickle", as_attachment=True)
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def get_common_prefix(string_1, string_2): """Find the largest common prefix of two strings. Args: string_1: A string. string_2: Another string. Returns: The longest common prefix of string_1 and string_2. """ # If either string_1 or string_2 is the empty string, the common ...
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def get_user_limit(session: Session, group: Group, modifier: int) -> bool: """ Comparing number of free seats and number of users in group and subgroups with parent groups. :return: False if space is exhausted. """ max_seats = get_num_seats(session, group) num_users = get_num_users(session,...
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def test_get_annotations_no_data( pandas_series, coordination_args, monkeypatch ): """Test coordination of annotation retrieval when no data retrieved for a given protein.""" def mock_get_anno(*args, **kwargs): protein_data = [] return protein_data monkeypatch.setattr(get_genbank_annot...
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import test def AddDeviceTest() -> bool: """Test of adding Devices to a DeviceGraph.""" t = test('AddDeviceTest') graph = DeviceGraph() ltd = LibraryTestDevice('ltd') sub1 = LibraryTestDevice('sub1') sub2 = LibraryTestDevice('sub2') sub11 = LibraryTestDevice('sub11') sub1.add_submodul...
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def get_name(scoring): """Get name of score. """ if not isinstance(scoring, str): scoring = get_scorer(scoring)._score_func.__name__.replace('_score', '') return scoring.replace('neg_', '').replace('maximum_', 'max_')
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def community_portal_policies_page_data(): """ This function pulls and returns all data required for the community portal stories page and returns a json of this information """ return json_loader('./database/raw_data/portal/policiesPageData.json')
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def retrieve_redcap_events(url, token, max_time=30): """Read the list of events from the REDCap instance using the API""" data = redcap_api_call(url, token, content='event', fields={}, max_time=max_time) # print("events: {}".format(data)) return data
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import torch from typing import Optional def global_to_local_space( points: torch.Tensor, cam_pose: torch.Tensor, device: Optional[torch.device] = None, _validate_args: bool = True ) -> torch.Tensor: """Transform points from global space to local space Args: points (torch.tensor): points in shape (b,...
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def quantization_model_or_class_factory(args, *, model=None, cls=None): """Return either converted model for quantization or a quantized version of the class passed""" if model is not None and cls is not None: raise AttributeError( "Pass either model or class to be converted for quantization...
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def get_user(user_id): """Get user by ID""" app.logger.info( 'Starting show user id: {} of request: {}'.format(user_id, g.request_id) ) response = user_schema.dump(UserService().find_or_404(user_id)) app.logger.info( 'Response of show user id: {} with response: {} of request: {}'.f...
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import numpy def check_type_force_float(x, name): """ If an int is passed, convert it to a float. If some other type is passed, raise an exception. """ if type(x) is int: return float(x) elif type(x) is not float and type(x) is not numpy.float64: raise TypeError("%r should be a...
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def platform2str(platform: str) -> str: """ get full platform name """ if platform == "amd": return "AMD Tahiti 7970" elif platform == "nvidia": return "NVIDIA GTX 970" else: raise LookupError
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def pdf_single_grid(request: HttpRequest, calendar_id: int): """A PDF grid from start date to end date with a given style and size""" cal = get_object_or_404(models.Calendar, pk=calendar_id) try: style_index = int(request.GET.get('style_index', 0)) size_index = int(request.GET.get('layout_...
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def enable_tpoint_group(client, name): """Enable trace on a specific tpoint group. Args: name: trace group name we want to enable in tpoint_group_mask. (for example "bdev"). """ params = {'name': name} return client.call('enable_tpoint_group', params)
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def tags_for_talks(conference=None, status=None): """ Return the used tags by talks, filtered by conferences and state of the talk """ talks = models.Talk.objects.all().values('id') if conference: talks = talks.filter(conference=conference) if status: talks = talks.filter(sta...
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from pydeconz import DeconzSession from unittest.mock import Mock from unittest.mock import patch async def setup_gateway(hass, data): """Load the deCONZ switch platform.""" loop = Mock() session = Mock() config_entry = config_entries.ConfigEntry( 1, deconz.DOMAIN, 'Mock Title', ENTRY_CONFIG,...
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def ldl_fft(G): """Compute the LDL decomposition of G. Args: G: a Gram matrix Format: FFT Corresponds to algorithm 8 (LDL) of Falcon's documentation. """ deg = len(G[0][0]) dim = len(G) L = [[[0 for k in range(deg)] for j in range(dim)] for i in range(dim)] D = [[[0 for k ...
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def get_time_step_data(data_in, time_step): """ Sparses data file for time steps specified by user. Parameters ---------- data_in : Density Data to be condensed into time steps time_step : float Time steps requested. Returns ------- data_out : Density Data in sp...
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def handle_command(command, event): """ Executes bot command if the command is known """ # Finds and executes the given command, filling in response for cmd, callback in command_mapping.items(): if command.lower().startswith(cmd): # command cleanup command = command.r...
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def select_from_context(context: TreeContext, criterion: CriteriaType, reverse: bool=False): """Yields all nodes from context which fulfill the criterion.""" return select_from_context_if(context, create_match_function(criterion), reverse)
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def combat_batch_correction(data, batch_col, index_cols): """ This function corrects processed data for batch effects. For more information visit: https://pypi.org/project/pycombat/ :param data: pandas dataframe with samples as rows and protein identifiers as columns. :param batch_col: column with the b...
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def keyfunc(line): """Return the key from a TAB-delimited key-value pair.""" return line.partition("\t")[0]
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from typing import List from typing import Optional import logging def calculate_average_face_encoding( face_encodings: List[List[np.ndarray]], ) -> Optional[np.ndarray]: """ Calculates the average face encodings with numpy.mean() method. :param face_encodings: List of image face encodings """ ...
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def make_error_extraction_tests(get_messages): """ Create a test case class for testing extraction of fields from exceptions. @param get_messages: Callable that takes an exception instance, returns all message dictionaries generated by logging it. @return: ``TestCase`` subclass. """ c...
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def lambda_handler(event, context): """ Lambda Handler (webhook via api gateway) """ update = telebot.types.Update.de_json(event["body"]) bot.process_new_updates([update]) return { "body": "ok", "statusCode": 200, "headers": {"Content-Type": "application/json"}, }
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def html_wrap(html_string): """Add an html-head-body wrapper around an html string.""" html_prefix="""<html> <head> <title>HTML CSS TESTS</title> <link rel="stylesheet" type="text/css" href="tests/manual html-css tests/html-css.css"> </head> <body>""" html_pos...
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import collections import time import tqdm def onpolicy_trainer(policy, train_collector, test_collector, max_epoch, step_per_epoch, collect_per_step, repeat_per_collect, e...
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def split(ary, n): """Given an array, and an integer, split the array into n parts""" result = [] for i in range(0, len(ary), n): result.append(ary[i: i + n]) return result
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def get_blog_name(url: str) -> str: """get the name of the blog""" path = urlparse(url).path if path.endswith("/"): return path.split("/")[-2] + ".md" else: return path.split("/")[-1] + ".md"
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def fget_preds(subdict, limit_date=False, lcompdate=None, ucompdate=None): """ stack predictions over ensemble runs get predictions and targets from runs shape: (90, 20729, 3) (n_ensemble_runs, n_windows, H) limit_date to crop for comparison with cls, esa etc. """ # shorter lookbacks have m...
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def entity_is_available(hass: HomeAssistant, entity: str): """evaluate whether an entity is ready for targeting""" state = hass.states.get(entity) if state is None: return False elif state.state == STATE_UNAVAILABLE: return False elif state.state != STATE_UNKNOWN: return True...
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def preview_model(request, content_app, content_class, content_id, preview_mode='default', load_dynamic_element=False): """ preview_model """ model_class = apps.get_model(content_app, content_class) form_class = modelform_factory( model_class, fields=[field.name for field in model_...
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def is_valid_word_array(words_to_check): """ --------------------------------------------------------------------- DESCRIPTION Checks if the words in the word (string) array are part of the dictionary. --------------------------------------------------------------------- PARAMETERS words...
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from operator import invert def _polydetrend_get_trend(da, *, dim, degree, preserve_mean, kind): """Polydetrend, atomic func on 1 group.""" if len(dim) > 1: da = da.mean(dim[1:]) dim = dim[0] pfc = da.polyfit(dim=dim, deg=degree) trend = xr.polyval(coord=da[dim], coeffs=pfc.polyfit_coeffic...
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def image_function(f='sin(x)*cos(y)', xmin=-1, xmax=1, ymin=-1, ymax=1, xsteps=100, ysteps=100, p="x,y", g=None, **kwargs): """ Plots a 2-d function over the specified range f takes two inputs and returns one value. Can also be a string function such as sin...
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def manager(manager_maker): """ return an uninitialized AccountManager instance. """ return manager_maker(addid=False)
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def tcp_to_udp_data(d): """ Trim TCP packet to send it over UDP. :param d: (bytes) TCP DNS response :return: (bytes) UDP ready DNS response """ d = d[2:] return d
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import types from typing import Tuple def coda_duration( tr: obspy.Trace, noise: float, ptype: str, cfg: types.ModuleType = config ) -> Tuple[float, float]: """Measure duration and associate quality control Args: tr: time series noise: noise level ptype: plo...
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def list_smc_files(path): """Lists all SMC files in a directory""" files = util.list_files(path, ".smc.gz") files.sort(key=get_smc_sample_iter) return files
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import math def encMethodSave5(file, picture): """Save an picture to a file.""" file.writeBytes(bit32.rshift(picture[0], 8), bit32.band(picture[1], 0xff)) for i in range(2, len(picture), 4): file.writeBytes(color.to8Bit(picture[i]), color.to8Bit(picture[i+1]), math.floor(p...
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import json def get_settings(lang, mode): """Get the makefile settings.""" schema_json = make_schema(lang, mode) error = None try: settings = json.loads(request.values.get('settings', '{}')) except: log.exception("Error in json parsing the settings variable") error = escap...
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import typing def vectorFactorization(vec: np.ndarray) -> typing.Tuple[np.ndarray, np.ndarray]: """I have probably reinvented a wheel. I have searched the Internet and haven't found this kind of factorization. Factors a vector vec into the product of an "upper-triangular-like" (mostly upper triangular, but with hol...
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def random_funfact(): """Returns random funfact or None.""" if FunFact.objects.published().count(): return FunFact.objects.random() return None
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def combine_results(results_list): """ Given different metrics based on the result lists provided. Inputs: results_list: dictionary containing the lists of all the results Returns: results_overall: dictionary containing the lists of all the results now with additional perfo...
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