content
stringlengths
35
762k
sha1
stringlengths
40
40
id
int64
0
3.66M
def locations(): """Fetches and displays the locations in Delhi""" status, body = api.locations(city='Delhi') return str(body['results'])
17a02bad20b0c4ab3d86f5b726f0bc800c7897fe
63,068
import numpy import scipy def _golbub_welsch(orders, coeff1, coeff2): """Recurrence coefficients to abscisas and weights.""" abscisas, weights = [], [] for dim, order in enumerate(orders): if order: bands = numpy.empty((2, order)) bands[0] = coeff1[dim, :order] ...
7edd7918c33482b3d33b49e9c90dfeab4f73fc6d
63,069
import array def solve(self): """Compute the parameters dict for the equivalent electrical circuit cf "Advanced Electrical Drives, analysis, modeling, control" Rik de doncker, Duco W.J. Pulle, Andre Veltman, Springer edition <--- ---> -----R-----wsLqIq-...
c24cb121508e0ef1b079d59192c2876712c4b11a
63,070
def register(request): """A view that manages the registration form""" if request.method == 'POST': user_form = UserRegistrationForm(request.POST) if user_form.is_valid(): user_form.save() user = auth.authenticate(email=request.POST.get('email'), ...
44f61c8ff8b55e11a544eec098ad93fcbea6a2b2
63,071
from typing import Union def reference(context: RuntimeContext, x: Union[ObjectRow, str]): """YAML-embeddable function to Reference another object.""" if hasattr(x, "id"): # reference to an object with an id target = x elif isinstance(x, str): # name of an object obj = context.field_vars...
fc5dd50caf998cf351f89627db9551dff444d64c
63,072
def merge_coordinate_molecular(coor, lattice, wyckoffs, w_symm_all, tol, orientations, PBC=[1,2,3]): """ Given a list of fractional coordinates, merges them within a given tolerance, and checks if the merged coordinates satisfy a Wyckoff position. Used for merging general Wyckoff positions into special ...
1c21fd7f2dbe1ddc6acb0d70790cf67d1d4fce53
63,073
def _validate_perf_config(config_contents, required_parameters): """Validates the perf config file contents. This is used when we're doing a perf try job, the config file is called run-perf-test.cfg by default. The parameters checked are the required parameters; any additional optional parameters won't be c...
052244699de20ea18453efccb0c4ae01080d7678
63,074
def insert(root: Node, value: int) -> Node: """ Insert element Split current tree with a value into left, right, Insert new node into the middle Merge left, node, right into root """ node = Node(value) left, right = split(root, value) return merge(merge(left, node), right)
529ffce8f107a40cd161f10b6a77a65c0ed363ba
63,075
def get_thickness_stats_for_both_hemispheres(subjects_dir, subject_id, mask_file): """ This function.. :param subject_id: :param subjects_dir: :param mask_file: :return: """ stats = dict() lh_thickness, rh_thickness = get_thickness_files_for_both_hemispheres( subjects_dir, s...
d82c9bb9af3e9a505097e652ff95598998d17cbb
63,076
from typing import Iterable from typing import Callable from typing import Tuple from typing import List def segment(iterable: Iterable[P], filter: Callable[[P], bool]) -> Tuple[List[P], List[P]]: """ :param iterable An iterable bunch of data to be split into two :param filter A filter to run over each el...
89daed0cdf3577f10afd12b740bd37cdd271bf12
63,077
def uridefrag(uristring): """Remove an existing fragment component from a URI string.""" parts = uristring.partition('#') return DefragResult(parts[0], parts[2] if parts[1] else None)
dd211bac44834a481a3f8bbc018992df36fd8e8b
63,078
from re import L def _miso_op(data_list, func, *args, **kwargs): """Create multi input and single output Caffe op""" n = caffe.NetSpec() if not isinstance(data_list, (tuple, list)): raise TypeError("Need tuple or list but get {}".format(type(data_list))) input_list = list() for idx, data i...
02cdd3c38c3ff027a5ef748eeb5fddd55f735fff
63,081
def autodl_auc(solution, prediction, valid_columns_only=True): """Compute normarlized Area under ROC curve (AUC). Return Gini index = 2*AUC-1 for binary classification problems. Should work for a vector of binary 0/1 (or -1/1)"solution" and any discriminant values for the predictions. If solution and predict...
f1a810fd5bce751bfdcea4021444a55a2eb7618c
63,082
def dectobin(x): """Convert Decimal to Binary. Input is a positive integer and output is a string.""" ans = '' while x > 1: tmp = x % 2 ans = str(tmp) + ans x = x // 2 ans = str(x) + ans return ans
21a6c0c161088f1e73afe87707503667b4651c87
63,083
def normalize_signals(signals) -> np.ndarray: """ Normalizes the data based on the variance Args: signals: (U x T) data streams Returns: Normalized (U x T) data streams """ signals = signals - np.min(signals, axis=1).reshape(signals.shape[0], 1) return signals / (3 * np.std(s...
412d3213e5d84d227f949f3d04fd7c9915784c6c
63,085
def muscovite(): """ Elastic constants of muscovite mineral (GPa) from Vaughan and Guggenheim (1986), in Voigt notation - Abbreviation: ``'ms'`` Returns: (tuple): tuple containing: * C (np.ndarray): Elastic stiffness matrix (shape ``(6, 6)``) * rho (float): Density ...
c16439359688042114460e6fb70b64c4fc740f1b
63,086
def fftshift(x, axes=None): """ Shift the zero-frequency component to the center of the spectrum. This function swaps half-spaces for all axes listed (defaults to all). Note that ``y[0]`` is the Nyquist component only if ``len(x)`` is even. Parameters ---------- x : array_like, Tensor ...
1fc2d602ef282ed9897967904a37098b018049e1
63,087
import hmac import base64 import hashlib def gen_signature(url: str, signed_nonce: str, nonce: str, data: str) -> str: """Request signature based on url, signed_nonce, nonce and data.""" sign = '&'.join([url, signed_nonce, nonce, 'data=' + data]) signature = hmac.new(key=base64.b64decode(signed_nonce), ...
e5ae94aa83711bec555eb4adec5b8d9e4985c3bc
63,088
def get_comment_url_xml(content_object, parent=None): """ Wraps ``get_comment_url_ajax`` with ``ajax_type='xml'`` """ try: return get_comment_url_ajax(content_object, parent, ajax_type="xml") except template.TemplateSyntaxError: raise template.TemplateSyntaxError, "get_comment_url_xm...
2810edb8f2f94c4acad2b8d5da901ea34f81762f
63,089
def create_connection_from_config(): """ Returns Google API client for Compute. It detects credentials for Service accounts and User accounts. """ credentials = ServiceAccountCredentials.get_application_default() return googleapiclient.discovery.build( 'compute', 'v1', credentials=credentials)
90228f9214952db05e7bfb09826fd7bb56b14f12
63,090
def getrevstofix(ui, repo, opts): """Returns the set of revision numbers that should be fixed""" if opts[b'all']: revs = repo.revs(b'(not public() and not obsolete()) or wdir()') elif opts[b'source']: source_revs = scmutil.revrange(repo, opts[b'source']) revs = set(repo.revs(b'(%ld::...
5cad3f34b2665eb12f01cce824589ad33af1963e
63,091
def mpin_server_1(mpin_id, date): """Calculate HID and HTOD.""" HID = mpin.ffi.new("octet*") HIDval = mpin.ffi.new("char []", mpin.G1) HID[0].val = HIDval HID[0].max = mpin.G1 HID[0].len = mpin.G1 # H(T|H(ID)) HTID = mpin.ffi.new("octet*") HTIDval = mpin.ffi.new("char []", mpin.G1) ...
a7be876896683f397bf1e002cdb06a2adbcf99d9
63,092
def plot_curve_metric(x, y, auc, curve_type, title=None, labels=None): """ Plot ROC or PRC curves per output channel. Args: - x (dict) - Dict of numpy arrays for values to plot on x axis. - y (dict) - Dict of numpy arrays for values to plot on x axis. - auc (dict) - Dict of numpy arrays for...
587cfe2d7298e0e726fd02078a8ec1416e2f82e3
63,093
def get_coordinate_dimensions(geometry): """Returns the dimensionality of the coordinates in a geometry (2 or 3). Returns -1 for not-a-geometry values. Parameters ---------- geometry : Geometry or array_like Examples -------- >>> get_coordinate_dimensions(Geometry("POINT (0 0)")) ...
12daf75dd668f57c332349ba7b19d15e0f6c4f95
63,094
def task_name(task): """ Compute the task name for an Eliot task. If we can't find a ``message_type`` or an ``action_type`` field to use to derive the name, then return ``None``. """ if task is None: raise ValueError('Cannot compute task name', task) level = u','.join(map(unicode, t...
9183e91dd898ae71c66a7d2c3bd44d8c7ef5f775
63,095
def getTestSuite(select="unit"): """ Get test suite select is one of the following: "unit" return suite of unit tests only "component" return suite of unit and component tests "all" return suite of unit, component and integration tests "pending" ...
5bf4561d16a50965fc32fe19df71e7072f24e551
63,096
def get_backend(project_type = None, project = None, logger = None): """ project_type is a string, like 'svn' project is a Project """ if project_type is None: project_type = project.project_type pass klass = backend_registry.get(proj...
18a2c2f5843616a50523706fff1f6e57a0d844ac
63,097
def create_entity(entity_name): """Add an entry to an array-type entity .. :quickref: Model; Add an entry to an array-type entity :param entity_name: Name of the entity """ model = read_model() new_entity = request.get_json() key_field = get_key_field(new_entity) entities = model['inp...
56695fd0996f5a2c8ea09d7b52376211bbabff0e
63,098
def abbreviate(s): """ Given a sentence replace middle of long words with a char count of the omitted :param s: String :return: String """ r = s for word in split_words(s): r = r.replace(word, abbreviate_word(word)) return r
3e0c94d4cf593dbc717a5140f45eb9f3b4e6ebf6
63,100
import json def block_hash(PARAMETER=None): """ Returns the block hash at a specific height. [PARAMETER] is optional, should be a block hash or height. [DEFAULT] equals to last block. """ if not PARAMETER: d = urllib2.urlopen(blockexplorer('block')) return json.loads(d.read()) else: d = urllib2.urlopen(...
271922dec0a1f62fc0dc705f5e047b8d2a7ba211
63,101
def get_mate_unmate_factor(n_cycles: float) -> float: """Retrieve the mating/unmating factor (piK). :param n_cycles: the average number of mate/unmate cycles expected per hour of operation. :return: _pi_k; the mate_unmate_factor. :rtype: float """ if n_cycles <= 0.05: return PI_...
e5229dd3a89846e633837d1bfe8c100e6c1a1322
63,102
import io def xml_marshal_bucket_constraint(region): """ Marshal's bucket constraint based on *region*. :param region: Region name of a given bucket. :return: Marshalled XML data. """ root = s3_xml.Element('CreateBucketConfiguration', {'xmlns': _S3_NAMESPACE}) location_constraint = s3_xml...
3fead9ea92ed8062ae43390e5aa25b2295b3aec6
63,104
def create_user( email, **fields ): """ Create a user: * must be given user_cert_bin as a keyword, which must be an ms_user_cert * the cert must be signed by the admin it identifies * the user must not exist * an existing admin must have signed the user cert * said admin has to have been the one t...
9766d053e0c5fe885a0253476a3a19e641f24b31
63,105
def drop_field(expr, field, *fields): """Drop a field or fields from a tabular expression. Parameters ---------- expr : Expr A tabular expression to drop columns from. *fields The names of the fields to drop. Returns ------- dropped : Expr The new tabular expressi...
3007a46d3a0a44f47e10ead1eb0ab3a0ff5be44c
63,106
def async_get_pickup_type_names( entry: ConfigEntry, pickup_types: list[PickupType] ) -> list[str]: """Return proper pickup type names from their associated objects.""" return [ t.friendly_name if entry.options.get(CONF_FRIENDLY_NAME) and t.friendly_name else t.name for t in ...
94f804dd3507612a1632bd300ebb3deada0109ff
63,107
from typing import Sequence from typing import Any def parse_beta(elems: Sequence[Any]) -> dist.Beta: """ Parse a list definition as a beta distribution. Examples: >>> u = parse_beta([2.31, 0.627]) >>> u.a FloatConst(2.31) >>> u.b FloatConst(0.627) >>> parse_beta(["one", 2]) Tr...
81fb83d0d52db9aaa29780b57207979069b32926
63,108
def BRepApprox_SurfaceTool_Value(*args): """ :param S: :type S: BRepAdaptor_Surface & :param u: :type u: float :param v: :type v: float :rtype: gp_Pnt """ return _BRepApprox.BRepApprox_SurfaceTool_Value(*args)
0a965be94ff7b789a7dc0c35f1debb95bae92b02
63,109
from typing import Counter def calc_mode(nums): """Calculate the number of number list.""" c = Counter(nums) nums_freq = c.most_common() max_count = nums_freq[0][1] modes = [] for num in nums_freq: if num[1] == max_count: modes.append(num[0]) return modes
dc35c0b792473f00f5e3eb841409959a0bf4ed18
63,111
def get_random_abstract(random_button_n_clicks): """ Get a random abstract for the random button. Args: random_button_n_clicks (int): The number of clicks of the random button. Returns: (str): The text of a random abstract. """ return el.get_random_abstract(random_button_n_clic...
04cbd05c690bf61630606cc43392c45e93b7503d
63,112
def wikilink_simple_url_formatter(text): """ A wikilink function that uses the simple URL formatter. :param str text: the text to format. """ return wikilink(text, simple_url_formatter)
c9a0f1b8f1920bca14ac26170b7084b5849c1b90
63,113
def getProperties(Id,propertyName): """ Get the properties for the associated group/contract combination """ property_parameters = { "contractId":Id['contract'], "groupId":Id['group'] } property_result = getResult('/papi/v0/properties', property_parameters) property_items = property_result['properties']['items'] ...
c538ac876c88da02c0f4bdc8fa61d8e884f3a85c
63,114
def chains_tot_proxy1_rule(M, w, t, k, i, j): """ Coordinate shift and tour type day shift variables. :param M: Model :param w: week :param t: tour type :param k: shift length :param i: window :param j: day :return: Constraint rule """ return M.Shift[i, j, w, k, t] == M.Tou...
ab80506304e2fc9a5b48ebde9a155e4a0028c830
63,116
def __pickle_method__(m): """ Pickling override for using pickle with instance methods. """ if m.im_self is None: return getattr, (m.im_class, m.im_func.func_name) else: return getattr, (m.im_self, m.im_func.func_name)
89e8da97d0c0c8efaef05a4531903ed43c66f62a
63,117
def keepCanvas() : """Keep the current canvas >>> with keepCanvas() : ... do something here """ return KeepCanvas()
702c719d9c25ba8df3cbb5747b76070076630b57
63,118
def conv_temperature_unit(value, unit): """ """ if type(value) is str and value.upper() in ["C", "F"]: raise TypeError("the type of paramter unit must be string.") if unit.upper() == "C": pass elif unit.upper() == "F": value = value * 1.8 + 32 else: raise ValueError("not supported temperatu...
af81cc1da519c76fab7679cec3e6f81dbb7e4beb
63,119
def colorize_label_map(label): """Colorizes a label map. Args: label: A 2D array with integer type, storing the segmentation label. Returns: result: A 2D array with floating type. The element of the array is the color indexed by the corresponding element in the input label to the color map. ...
420addaaf514c65532acbcb1e2b54eecfaa4b881
63,120
def get_table1(data_cwhsa, data_cwhsb): """ Create Table 1 of the paper. Parameters ---------- data_cwhsa : pd.DataFrame CWHS data until 1978. data_cwhsb : pd.DataFrame CWHS data from 1978 on. Returns ------- table_1 : dictionairy The dict holds the keys "wh...
bd3556a5736486e81e08a677b6a0d05d4e653b7f
63,122
import torch def collate_fn_lm(samples): """ Creates a batch out of samples """ x = torch.LongTensor(samples) return x[:, :-1], x[:, 1:].contiguous(), None
fbaa043dca5898f2df5a9f7367b654c1eedd6c0f
63,123
def AdvRebaseStream(filehandle): """Class for iteration over entries in a Rebase bairoch format file""" return EntryStream(filehandle, 'TY', 'ER')
6b487c23c05c2af62002d707f57e5b627934f45c
63,124
def deletions_number(s): """ :type s: str :rtype: int """ char_list = list(s) c, del_count = char_list[0], 0 for next_c in char_list[1:]: if next_c == c: del_count += 1 else: c = next_c return del_count
b63b304510e58ad2191829138c5050e0e661adc5
63,126
def get_omero_dataset_id(conn, openbis_project_id, openbis_sample_id): """ Prints all IDs of the data objects(Projects, Datasets, Images) associated with the logged in user on the OMERO server Args: conn: Established Connection to the OMERO Server via a BlitzGateway ...
ce96afe5c7a6825b2c1b258b9335e0edb145e491
63,127
import glob import torch def model_pos_preparation(args, device): # def model_pos_preparation(args, device): """ return a posenet Model: with Bx16x2 --> posenet --> Bx16x3 """ # Create model num_joints = 16 # num_joints = 16 print('create model: {}'.format(args.posenet_name)) if args....
73b0e4f94d5c37bec7765178db51a68df21a34e7
63,128
from typing import Any from typing import Type def get_object_type_as_json_exportable(object: Any) -> Type: """Get object type to be json exportable. It appends to_json method to an object type dynamically. """ object_type = object if isinstance(object, type) else type(object) if not getattr(obje...
41af74797b19fa76cef58ebbfa00487e359b6e69
63,129
def _construct_tensor_list(types, shapes, batch_expand_num=1): """ Construct list of tensors with types and shapes, used to initialize the network. Args: types: List or Tuple. The output types of element in dataset. shapes: List or Tuple. The output shapes of element in dataset. bat...
d37d8e2aa188e223aa4c90526f2e8c28a7f0c21d
63,130
def _process_exp(data_dir, exp_accession, metadata, assembly, criteria): """Process one experiment from the metadata table. Parameters ---------- data_dir : str path to the directory with bedfiles exp_accession : str ENCODE Experiment Accession ID from the metadata table metadat...
6b0bcae187f217cfdbda30cc18fe73fc8a2b3eed
63,131
def rem_member_from_db(member_id): """Remove member from database. Used for removing members from database in certain cases (Ignoring in shipping and etc.) **Noteworthy:** This makes sense until the bot reboots. In future there are plans for adding ignore list for shipping and other commands ...
c6757ce28fd9a87af5d18b5b64ba5bc5119ee379
63,132
from typing import List def all_grams_from_tokens(tokens: List[Token]) -> List[NGram]: """make all the 1, 2, 3, and skip-3 grams from some tokens""" return (ngrams(1, tokens) + ngrams(2, tokens) + ngrams(3, tokens) + ngrams(3, tokens, skip=True))
dfaf9abe27c8d2a5773c239a3b018061d065958b
63,133
def linear_interpolation_spherical(y_initial, y_final, n, pins=None): """ This function returns a (n, len(y_initial)) array, where every row is an interpolation of the coordinates in y_initial to y_final. The interpolation is made in spherical coordinates ARGUMENTS: y_initial, y_final ::...
75dbf5804397d388d0f561e8df95c6b7cfad3435
63,134
def calc_depreciation(scenario, lights, avg_photoperiod, years): """Calculate Depreciation Function to Compute Total Farm Depreciation each Year Typically accounts for 21 production costs Args: scenario (object): The farm scenario lights (object): The lights used on the farm avg_ph...
ee4d8c4c5612d6cd95bdd2da257351c994984405
63,135
def diff_dictionaries(old_dict, new_dict): """Calculate the diff two single dimension dictionaries. Args: old_dict(Dict[Any, Any]): Old dictionary. new_dict(Dict[Any, Any]): New dictionary. Returns: Tuple[int, List[:class:`DictValue`]]: Number of changed records and the :cl...
e7d9156bf82bdf27f2692417c3a054b31726aa21
63,137
def is_anagram(word1, word2): """Checks whether two words are anagrams word1: string or list word2: string or list returns: boolean """ return sorted(word1) == sorted(word2)
7a7184f3e9cbe5d1232f0c2750eebde2b9679dc7
63,138
from typing import Optional def sql(code: str, *, class_: Optional[str] = None, **kwargs: PropertyValue) -> pre: """ Highlighter method for SQL code. Keyword arguments not listed in the arguments section are turned into element attributes on the created `pre` element. Arguments: code: Th...
27c79def1dde2aa170719d48b380a8f2518f9518
63,140
def aggregate_mean_std_matrix(mu, sigma, n): """Given a matrix of mu, sigma, n return the aggregated array mu, sigma, n (remove the first matrix axis) """ mu = np.array(mu) sigma = np.array(sigma) n = np.array(n) nrow, ncol = mu.shape mu_agg_all = [] sigma_agg_all = [] n_...
810e189d1e93054d011a9cb2af763c6cb10ffa15
63,141
import six from six import StringIO def config_from_str(input_str): """Return a ConfigObj from a string. Values will be in Unicode.""" # This is a bit of a hack. We want to return a ConfigObj with unicode values. Under Python 2, # ConfigObj v5 requires a unicode input string, but earlier versions require ...
52c82e6ff42fc910695afd249f3d5f618ffc2882
63,142
def PyTuple_GetSlice(space, w_obj, low, high): """Take a slice of the tuple pointed to by p from low to high and return it as a new tuple. """ return space.getslice(w_obj, space.newint(low), space.newint(high))
d42ffc16a55deaa858648f2c23b7be14694402ce
63,143
def build_url_dict(sports=SPORTS): """ returns dictionary of { sport (str) : url (str) } """ urls = {} for sport in sports: urls[sport] = [BOV_URL + sport + suffix for suffix in SUFFIXES] return urls
792301e9d556257a457c30310497b51cf856f351
63,144
def check_index_in_list(name_list, index): """ Returns whether or not given index exists in a list of names For example: name_list: ['a', 'b'] 0 exists, 'a', so we return True 1 exists, 'b', so we return True -1 exists, 'b', so we return True 2 does not exists, we ...
efedd7511377e29cc28ea4212271a4b6b59cb3b2
63,145
def electron_distribution_width_old(gamma, **params): """ Calculate the energy-dependent width of the electron distribution Parameters ---------- gamma: array-like gamma values params: dict dict with parameters Returns ------- Width of electron distribution as a fu...
e9892a7151e5333c0b0dae589d68fe45983f1e10
63,146
def pade6(vec, h): """ 6th Order compact finite difference scheme (non-periodic BC). Lele, S. K. - Compact finite difference schemes with spectral-like resolution. Journal of Computational Physics 103 (1992) 16-42 """ n = len(vec) rhs = np.zeros(n) a = 14.0 / 18.0 b = 1.0 / 36.0 ...
0eed51b808370e453598019965da8596fda887dd
63,147
def tile_pil_image( image: Image.Image, tile_factor: int = 0, shade: bool = True ) -> Image.Image: """ Tile PIL Image. :param image: PIL Image object :param tile_factor: number of tiles, if tile_factor=0, this function returns a copy of the input image :param shade: make non-central til...
936ea55aaf70a66d74c79e1d55189aa47cb0a707
63,148
def get_cell_area_ha(raster_file): """Get grid cell area (ha) of raster file, without loading it into memory""" units = get_prj_units(raster_file) if units == 'm': x_res, y_res = get_xy_res(raster_file) area_ha = x_res * y_res * 1e-4 return area_ha else: print('Error: CRS units are {} (must be meters).'.for...
214fafa7f211c6b0a9eb8600c8e407d3e56d8bda
63,149
def _normalize_sexpr(text): """ Normalize s-expr by making sure each toplevel expr is on a new line, and sub-expressions are always indented. Starts of block comments are also alwats indented. As a result, the text can now be split on "\n(" to get all expressions. """ # You probably dont wa...
4e3b35f5021ad7cdb857ac8516876b88bf7281c3
63,150
from typing import Dict def parse_teams(elem, known_teams: Dict[str, Team]) -> Dict[str, Team]: """Returns the teams involved in the match""" cell = elem.select('tr')[1:2][0] away_name: str = cell.contents[1].select('font')[0].contents[0].contents[0].strip() try: away: Team = known_teams[away_...
f17f7b1aa9e57e1600a73a95972c346013fc9df7
63,152
def delconj(lam, ur, ur_inv, dups): """ Delete one eigenvalue/eigenvector from of each pair of complex conjugates. Parameters ---------- lam : 1d ndarray The vector of complex eigenvalues ur : 2d ndarray Normalized complex right eigenvectors ur_inv : 2d ndarray I...
7adc71774a30a640c2baddd64f726ab4b3456e48
63,153
import random import json def generate_random_password(field, **kwargs): """ Generate a random string password or a random encryption method. Args: field: The field object. Keyword Arguments: only_required: The argument to generate only required fields. fulldate: A boolen to d...
16424ed90753508bdc2824d49b859c098756e3d3
63,154
def put_something(): """ Put something --- responses: 200: description: Success """ return "I put something", 200
e5464c86acc852d68c8a78bde3558b0673656636
63,155
from typing import Optional from typing import Sequence def cell_co_occurrence( data: AnnData, groupby: Optional[Array] = None, agg: str = "sum", selected_types: Optional[Sequence] = None, use: str = "dot", # dot, heatmap key: Optional[str] = None, **kwargs, ): """Visualization for ce...
37a999fde747ea39c472bfd03f5026b1c97d959c
63,156
def is_link_array(value): """Checks if value is an array of links. :param value: any object. :return: Boolean :rtype: bool Usage: >>> is_link_array('foo') False >>> is_link_array([1, 2, 3]) False >>> is_link([{'sys': {'type': 'Link', 'id': 'foobar'}}]) ...
00140bd454c0c10578664da7ae3ba507386a4fe7
63,157
def robust_topological_sort(graph): """ First identify strongly connected components, then perform a topological sort on these components. @param graph graph to be ordered """ components = strongly_connected_components(graph) node_component = { } for component in components: f...
64791a530f70d31dbb2df878aa4d2f8d7652a098
63,158
import shlex def execute(cmd, args): """ Just a simple wrapper for executing commands. args is expected to be a sequence or a basestring, a basestring will be executed with shell=True. """ if isinstance(args, basestring): args = smart_str(args) args = shlex.split(args) else: ...
8cf7e54c88c41ce6e7a27dfe3465078e79070d5e
63,160
def sql_get_columns_for_table(table_schema: str, table_name: str) -> list: """Generate an SQL command that returns the list of column of a specific table. Compatible with MySQL/ MariaDB/ Postgres and Snowflake table_schema and table_name can be lowercase and uppercase strings. It's using the IN clause ...
8c5fb78a6a1ff242b333d750cb659b67eb15c52d
63,161
from typing import Tuple from typing import List def override_module_args(args: Namespace) -> Tuple[List[str], List[str]]: """use the field in args to overrides those in cfg""" overrides = [] deletes = [] if args is not None: assert ( hasattr(args, "task") and hasattr(...
9501338b4649cf020f4b99f70649e92bbb31fc1f
63,163
import enum def pascal_case(value): """Convert strings or enums to PascalCase""" if isinstance(value, enum.Enum): value = value.name return value.title().replace('_', '')
6e994650755968a3f73b345e1f3e040f0f211aa9
63,164
import math def computeSNQ(DW2,N): """ Takes the exponent for the Debye Waller factor `DW2` = 2W, and an integer N indicating a term in the phonon expansion and returns the intensity of the N-phonon incoherent scattering S_N(Q) Parameters ---------- N:integer a term in the phonon e...
6f48baaffb647a97f9662b44f0916443f3338003
63,165
def format_timedelta(td): """ Format a timedelta object with the format {hours}h {minutes}m. """ if td is None: return '0h 0m' seconds = td.total_seconds() hours, seconds = divmod(seconds, 3600) minutes = seconds / 60 return f'{int(hours)}h {int(minutes)}m'
e0b30250eef25db9b905e9e6d6c82a41b742112b
63,166
def get_file_mode_for_reading(context_tar): """Get file mode for reading from tar['format']. This should return r:*, r:gz, r:bz2 or r:xz. If user specified something wacky in tar.Format, that's their business. In theory r:* will auto-deduce the correct format. """ format = context_tar.get('for...
05908234027070c1479e5159fc16eda267228042
63,167
def apply_broadening(ipres, x_seg, y_seg, type="gauss", sme=None): """ Broaden a spectrum by instrument resolution, with a given broadening type Parameters ---------- ipres : float instrument resolution x_seg : array (npoints,) x values (wavelength) of the spectrum to broaden ...
3b3d09ef0c995efb87c75a6e79b00a1969dea57d
63,168
def iterate_ranges(range_tuples, nums): """ Yields all points of N-dimensional regular rectangular grid. :param range_tuples: List of :math:`(a_i, b_i)` tuples, where :math`i` is the number of grid dimensions. :param nums: List of number of points for grid's :math:`i`-th dimens...
4d2d3affaa286f56926cdba815b1376d24effe48
63,169
def touch_files(path): """ This function creates all necessary files for to be used with Arbiter or FFTB. """ touch = ['parse', 'edge', 'run', 'analysis', 'decision', 'fold', 'item-phenomenon', 'item-set', ...
5a6fe27eecfeee834aa0de8977c3f1acb1558623
63,170
def GaussBeam(w0, Fin, n=0, m=0, xshift=0, yshift=0, tx=0, ty=0, doughnut=False, LG=False): """ Fout=GaussBeam(w0, Fin, n=0, m=0, xshift=0, yshift=0, tx=0, ty=0, doughnut=False, LG=False): Creates a Gaussian beam in its waist. Args:: required: w0: size of the Gauss waist ...
125ca4f0edc71f6badfac46fc7fd9696cf2c34dc
63,171
def checkKey(key): """Return True if key is valid. Otherwise return False.""" keyList = list(key) lettersList = list(LETTERS) keyList.sort() lettersList.sort() if keyList != lettersList: print('There is an error in the key or symbol set.') return False return True
c3a58eb2716dad8415b78123eaeee1e3a39abd7b
63,172
def _to_seq_array(x): """ Converts a list of sequences from a generator to a DataFrame of sequences """ seq_series = pd.Series({s.metadata['id']: str(s) for s in x}) return seq_series.apply(lambda x: pd.Series(list(x)))
ab04c36fefd7775c9a62e0850a8b6d77e5c2fa41
63,173
def update(isamAppliance, name, uuid, aclEventsAllocation, ipsEventsAllocation, sysEventsAllocation, objType='logdb', comment='', check_mode=False, force=False): """ Update a specific logdb object """ if force is True or ( _exists(isamAppliance, uuid) is True and _check(isamApplia...
3d9624041c69af4cfb1872c2e76081c7bf9e243e
63,174
def handle_429(e): """捕获abort(429)频率限制错误""" rsp = { 'msg': 'Too Many Requests', 'err': 30 } err_info = { 'msg': 'Too many requests', 'ip': request.remote_addr, 'url': request.url, 'method': request.method, } logger.api_logger.error(err_info) re...
3716438b2c81e78da4138a3dabea81677eec6f69
63,175
def default_smooth_aperpar_bkg(newx_lst, ypara, fitmask, group_lst, npoints): """Smooth *bkg* of the four 2D profile parameters (*A*, *k*, *c*, *bkg*) of the fiber flat-fielding. Args: newx_lst (:class:`numpy.ndarray`): Sampling pixels of the 2D profile. ypara (:class:`numpy.ndarray`): Arra...
48a737d4e3f4e10f6ec88c236687902dece87736
63,176
from typing import Union from typing import Optional from typing import List def format_helper( df: Union[pd.DataFrame, Styler], int_cols: Optional[List[str]] = None, pct_cols: Optional[List[str]] = None, delta_cols: Optional[List[str]] = None, monospace: bool = True, hide_index: bool = True, ...
8f41410b7e735fa7c618718cefc7790a6be39cb3
63,177
def buildFeatureTableSubstitutionRecord(featureIndex, lookupListIndices): """Build a FeatureTableSubstitutionRecord.""" ftsr = ot.FeatureTableSubstitutionRecord() ftsr.FeatureIndex = featureIndex ftsr.Feature = ot.Feature() ftsr.Feature.LookupListIndex = lookupListIndices return ftsr
22a64da7f9192b3117ec002bff997f4e6c3976db
63,178
from typing import Union from typing import List from typing import Tuple def get_go_interface_instance(background: Union[List[int], List[Tuple[int, float]]] = ()) -> \ GeneOntologyInterface: """ Generates a Matrix_Knowledge_DB interface for the use in the spawner. If :return: a GO_interface obje...
107036f160d5e9c5e885bc205a883a8eb80e44b5
63,179
import re def StripComments(line): """Strips comments from a line and return None if the line is empty or else the contents of line with leading and trailing spaces removed and all other whitespace collapsed""" commentIndex = line.find('//') if commentIndex is -1: commentIndex = len(line) line = re....
06a01a01889d7f6c169acb3090eadf2c6e07d219
63,180
import itertools def final_vowel_substitution_transducer(add_meta_arc=True): """Substitute final vowels (optionally).""" t = pt.Transducer() for l in pt.abc.ALL_SYMS: t.add_arc(0, 0, l, l) t.add_arc(0, 1, l, l) max_node = 1 for s_ar, s_sw, subst_cost in pt.abc.AR_SW_FINAL_VOWELS: prev_node = 0 ...
a19e1ffc306e77788b0df7dfc4e60af2654d2727
63,181