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from typing import AnyStr from typing import List from typing import Dict def get_node_namespace_total_rating(node: AnyStr, namespace: AnyStr, start: AnyStr, end: AnyStr, ten...
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async def messages(request: web.Request): """ Sends a message in the specified guild and channel Needs to be called with a json payload: { "message": Optional[str], "embed_title": Optional[str], "embed_description": Optional[str], "guilds": [ { ...
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def getPCModule(moduleName, moduleDir=None): """ @type moduleName: str @param moduleDir: if specified, the directory where the module can be loaded from; allows discerning between modules with the same name in a different directory. Note...
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def white(ntaps): """Compute impulse response for white noise. :param ntaps: Length of impulse response. :returns: Impulse response of length `ntaps`. """ ir = np.zeros(ntaps) ir[0] = 1 return np.fft.ifftshift(ir)
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def sort_by_absolute_val(df, column): """Sort df column by descending order in terms of the absolute value.""" df = df.reindex(df[column] .abs() .sort_values(ascending=False) .index) return df
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def gluon_resnet50_v1d(pretrained=False, num_classes=1000, in_chans=3, **kwargs): """Constructs a ResNet-50 model. """ default_cfg = default_cfgs['gluon_resnet50_v1d'] model = GluonResNet(BottleneckGl, [3, 4, 6, 3], num_classes=num_classes, in_chans=in_chans, stem_width=32, deep_...
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def GetTableIncrValue(tablename): """ """ database = dbpool.config.get('db') sql = """SELECT AUTO_INCREMENT FROM information_schema.`TABLES` \ WHERE TABLE_SCHEMA='%s' AND TABLE_NAME='%s';"""%(database,tablename) conn = dbpool.connection() cursor = conn.cursor() cursor.execute(sql) re...
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def IndexFramesWithCrashedGroup(stacktrace, crashed_group_factory, dependencies): """Index frames in stacktrace by dep_path and crashed_groups. Args: stacktrace (Stacktrace): The stacktrace to parse. crashed_group_factory (callable): A callable to factory crashed_group. ...
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import optparse def process_cmd_line(): """Set up and parse command line options""" usage = "Usage: %prog [options] <file>" parser = optparse.OptionParser(usage) parser.add_option("-b", "--batchmode", action="store_true", dest="batchmode", help="Does not interact with user (no windows etc.)",...
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from .project.project import list_projects from .project.project import get_project from .project.project import create_project from .project.project import delete_project def project(): """ methods=='GET':获取指定项目id的信息 Args: 'id'(str, optional):项目id,可选,如果存在就返回项目id对应项目的信息 Return: ...
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def tokenise_stream(stream): """Process stream to an array of tokens.""" return [token for token in stream]
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from typing import Mapping from typing import List from typing import Any def read_capabilities(capabilities) -> Mapping[str, List[Any]]: """ Reads the capabilities from the relevant section of the config of a building's blueprint :param capabilities: the config section :return: a mapping of capabilit...
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def get_ness(log_weights, dx): """Normalized ESS (ESS / N)""" xvals, yvals = get_ess(log_weights, dx=dx) return xvals, yvals / xvals
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def post_message(*args, **kwargs): """ Post a message to Slack. """ return client().chat_postMessage(*args, **kwargs)
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def exprClausesToIndexClauses(clauses, symbol_dict): """ Convert each Expr in a list of clauses (CNF) into its corresponding index in the symbol_dict (see mapSymbolAndIndices) """ clauses_int = [] for c in clauses: c_disj = disjuncts(c) c_int = [] for lit in...
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def dvr_response_default_status(): """ Helper to get/set the default status for response records @return: the default status_id """ s3db = current.s3db rtable = s3db.dvr_response_action field = rtable.status_id default = field.default if not default: stable = s3d...
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def __compute_percentiles(img, mask, cutoff): """ Create the list of percentile values to be used as landmarks for the linear fitting. :param img: Image on which to determine the percentiles :param mask: Mask to use over the image to constraint to the relevant information :param cutoff: Val...
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def pawn_collision(offsets): """ Return True if the pawn, after moving with the given offsets, will be on the same cell as another pawn. Otherwise, return False. """ current_pawn, others_pawns = split_pawns() for p in others_pawns.values(): if p == [current_pawn[0] + offsets[0], current_pawn...
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from numpy import isnan,maximum,seterr def VPC_dict(N,Dvar,Imean,Ivar): """Generates VPC and VPCvar from Imean and Ivar data given N and Dvar. It is assumed the background offset (Dmean) has been subtracted from Imean. VPC corresponds to variance per count; when mulitplied by counts, this scale factor...
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import math def area_of_pixel_km2(pixel_size, center_lat): """Calculate km^2 area of a wgs84 square pixel. Adapted from: https://gis.stackexchange.com/a/127327/2397 Parameters: pixel_size (float): length of side of pixel in degrees. center_lat (float): latitude of the center of the pixel...
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def get_topic_tele_will(config: ConfigType) -> str: """Get topic for tele will.""" return _get_topic_tele(config) + "LWT"
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def get_timetuples_since_event(timing_grid: list, target_labels: list, start_label: str, end_label: str=None, convert_clk_to_ns: bool=False) ->list: """ Searches for target labels in a timing grid and returns the time between the the events and t...
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def zplane(b, a, filename=None, fignum=1): """Plot the complex z-plane given a transfer function. """ # get a figure/plot plt.figure(fignum) ax = plt.subplot(111) # create the unit circle uc = patches.Circle((0, 0), radius=1, fill=False, color='black', ls='dashed') ...
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def pishop(pishop_url : str) -> dict: """Scrape product information from pishop.us Keyword arguments: pishop_url -- a product url from pishop.us """ pishop_product = _pishop._pishop(pishop_url) return pishop_product
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def to_label(row): """Convert a Region or (chrom, start, end) tuple to a region label.""" return "{}:{}-{}".format(row.chromosome, row.start + 1, row.end)
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def bool_check(arg, config, default): """Return bool from `arg` or `config` str, or `default` bool. Arguments from the parser and configuration file are represented as strings. Arguments that represent boolean values need string compares, and then return the actual boolean object. Args: ar...
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def wraps(func): """ Nearly identical to functools.wraps, except that it also maintains the ``__wraps__`` attribute, which will always be the origin function. """ def wrapped(wrapper): actual = getattr(func, "__wraps__", func) for attr in ("__module__", "__name__", "__doc__"): if hasattr(actual...
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def glVertexAttribPointerARB( baseOperation, index, size, type, normalized, stride, pointer, ): """Set an attribute pointer for a given shader (index) index -- the index of the generic vertex to bind, see glGetAttribLocation for retrieval of the value, note that index is a global variable, not per-shader s...
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from typing import List from typing import Set def _reconstruct(vals: List[float], weights: List[int], budget: int, cap: int, dp: List[List[List[float]]]) -> Set[int]: """ Private helper function to reconstruct the included items according to the optimal solution using backtracking. :...
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def cosine_similarity(a: carla.Vector3D, b: carla.Vector3D) -> float: """-1: opposite vectors (pointing in the opposite direction), 0: orthogonal, 1: exactly the same (pointing in the same direction) """ return dot_product(a, b) / (vector_norm(a) * vector_norm(b))
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from pathlib import Path def pytest_collect_file( file_path: Path, parent: pytest.File ) -> pytest.Collector | None: """ This hook is called when collecting test files, and can be used to modify the file or test selection logic by returning a list of ``pytest.Item`` objects which the ``pytest`` co...
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def compute_component_suffstats(x, mean, S, N, p_mu, p_k, p_nu, p_L): """ Update mean, covariance, number of samples and maximum a posteriori for mean and covariance. Arguments: :np.ndarray x: sample to add :np.ndarray mean: mean of samples already in the cluster :np.ndarray ...
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def advisors(request): """ Renders the advisors page template """ return render(request, "advisors.html", {})
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def to_unbounded_array(args:list, cursor:int) -> (bool, int, list): """Consume any number of values until either reaching the end of args, or until finding a value starting with '-', denoting the beginning of a new argument. Return success, the cursor, and the list of values. Currently this can't actual...
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def _cap_str_to_mln_float(cap): """If cap = 'n/a' return 0, else: - strip off leading '$', - if 'M' in cap value, strip it off and return value as float, - if 'B', strip it off and multiple by 1,000 and return value as float""" if cap == 'n/a': return 0 mult = 1 if ...
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def make_cylinder_with_tags(outer_radius, inner_radius, insert_angles, tag_widths): """Creates a wire outline of a cylinder with inserts to a smaller cylinder for part of the radius. Args: outer_radius (float): Radius main cylinder. inner_radius (float): Radius of the inner surface of th...
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def _add_secondary_index(dataframe, system): """ Get a 2-indices dataframe from a dataframe with a DateTimeIndex index with (dataframe.DateTimeIndex, system) as the new index """ # Add a secondary index based in the value of `system` in order to avoid # breaking cluster statistics, i.e. data com...
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def is_palindrome_permutation_solution(input_string): """Same goal as is_palindrome_permutation, but using more efficient solution from book, using a bit vector. """ bit_vector = create_bit_vector(input_string) # bit_vector must be all 0s, or just have 1 bit set (to 1) return bit_vector == 0 or ...
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def is_fragment_compatible(sequence): """check fragment for compatibility """ # attach fwd primer and cut site, and confirm cut sites fragment_extended = MPRA_PARAMS.FWD_PCR_PRIMER + sequence + MPRA_PARAMS.RS_XHOI if fragment_extended.count(MPRA_PARAMS.RS_ECORI) != 0: return False if fragment_ex...
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def convert_vds_schema_string_to_annotate_variants_expr( top_level_fields="", info_fields="", other_source_fields="", other_source_root="", root="", split_multi=True): """Takes a string representation of the VDS variant_schema and generates a string expression tha...
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def get_public_key(key, passphrase=None, asObj=False): """ Returns a string containing the public key in PEM format. key: A path or PEM encoded string containing a CSR, Certificate or Private Key from which a public key can be retrieved. CLI Example: .. code-block:: bash ...
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import json def authenticate(user, api, version): """Returns google service""" with open('/code/client_secret.json', 'r') as file: client_secret_file = json.load(file) try: credentials = client.OAuth2Credentials( access_token=None, client_id=client_secret_file['web...
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def ensure_enum(value, cls): """确保返回值是对应的 class 对象""" if type(value) == cls: return value return cls(value)
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def vit_deit_tiny_patch16_224(cfg): """ DeiT-tiny model @ 224x224 from paper (https://arxiv.org/abs/2012.12877). ImageNet-1k weights from https://github.com/facebookresearch/deit. """ model = VisionTransformer(patch_size=cfg.CONFIG.MODEL.PATCH_SIZE, embed_dim=192, ...
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def create_saveable_object(factory, name, call_with_mapped_captures): """Creates a SaveableObject while potentially in a different graph. When creating the frozen saver for SavedModel, the save and restore ops are placed in a separate graph. Since RestoredSaveableObject uses tf.functions to save and restore, t...
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def temperate_seasons(year=0): """Temperate seasons. Parameters ---------- year : int, optional (dummy value). Returns ------- out : dict integers as keys, temperate seasons as values. Notes ----- Appropriate for use as 'year_cycles' function in :class:`Calenda...
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import glob def folderCount(path, wildcard= "*",position = "m"): """ retuns the count of folders or files in a folder >>>folderCount(fillpath, wildcard= "*",position = "m") fullpath --> path to the folder wildcard --> if not set, it will use '*' as default position --> to sp...
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def manual_stepping(global_step, boundaries, rates): """Manually stepped learning rate schedule. This function provides fine grained control over learning rates. One must specify a sequence of learning rates as well as a set of integer steps at which the current learning rate must transition to the next. For...
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def create_look_ahead_mask(size): """ decoder里的遮盖机制 mask """ mask = 1 - tf.linalg.band_part(input=tf.ones((size, size)), num_lower=-1, num_upper=0) return mask
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def is_boolean(M): """ @brief Test if a matrix M is a boolean matrix. """ for i in M: for j in i: if j != 0 and j != 1: return False return True
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def DateWidget(*args, **kw): """ DateWidget to pick datetime type, if bounds but no default is defined default to min. """ if kw.get('value') is None and 'min' in kw: kw['value'] = kw['min'] return DatePicker(*args, **kw)
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def find_clique_embedding(k, m=None, target_graph=None): """Find an embedding of a k-sized clique on a Pegasus graph (target_graph). This clique is found by transforming the Pegasus graph into a K2,2 Chimera graph and then applying a Chimera clique finding algorithm. The results are then converted back in ...
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def get_week_day(integer): """ Getting weekday given an integer """ if integer == 0: return "Monday" if integer == 1: return "Tuesday" if integer == 2: return "Wednesday" if integer == 3: return "Thursday" if integer == 4: return "Friday" if in...
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def syscmd(cmd, encoding=''): """ Execute Shell Command Args: cmd: str, cmd command encoding: str, encoding Returns: Output on Success or Returncode in Failure """ p = Popen(cmd, shell=True, stdin=PIPE, stdout=PIPE, stderr=STDOUT, close_fds=True) p.wai...
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def get_chatt(user): """ This function returns all the branches ID's for a user, If the user does not exist then False is returned. """ chatt_object = Chatt.query.filter_by(user_id=user).first() if chatt_object is not None: return [x.id for x in chatt_object.branch] else: re...
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import base64 import six def deserialize(obj): """Deserialize the given object :param obj: string representation of the encoded object :return: decoded object (its type is unicode string) """ result = base64.urlsafe_b64decode(obj) # this workaround is needed because in case of python 3 the ...
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def _pt_to_axes_units(ax, x, y): """Convert (x, y) from point units to axes units on axes `ax`.""" t = ax.transAxes.inverted() return t.transform((x, y)) - t.transform((0, 0))
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def write_encrypted_file(filename, content, password): """ Writes the given content to the specified file and encrypts it with the specified password. :param str filename: File to which the content should be written. :param str content: Content to be written. :param str password: Password to encrypt...
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import yaml def ydump(data, *args, sort_keys=False, **kwargs): """ Create YAML output string for data object. If data is an OrderedDict, original key ordering is preserved in internal call to yaml.dump(). :param data: :type data: dict or Bunch :param args: Additional args passed on to yaml.d...
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import pandas as pd def shareseq_palette_df(): """Defines the dataframe for colors pertaining to the celltypes of the SHARE-seq dataset.""" d = { "celltypes": [ "alpha-high-CD34+ Bulge", "alpha-low-CD34+ Bulge", "Isthmus", "K6+ Bulge/Companion Layer",...
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def html_parts( input_string, source_path=None, destination_path=None, input_encoding="unicode", doctitle=True, initial_header_level=1, ): """ Given an input string, returns a dictionary of HTML document parts. Dictionary keys are the names of parts, and values are Unicode strings; ...
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import base64 import hashlib def x5t_calculation(cert): """ base64url-encoded SHA-1 thumbprint (a.k.a. digest) of the DER encoding of an X.509 certificate. :param cert: DER encoded X.509 certificate :return: x5t value """ if isinstance(cert, str): der_cert = base64.b64decode(cert....
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def binom_coeff_all(N, MAX = None): """ Sum all all binomial coefficients up to MAX. """ B = generatebinary(N, MAX) s = np.sum(B, axis=1) c = np.zeros(N+1, dtype=np.int64) for i in range(N+1): c[i] = np.sum(s == i) return c
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import requests import re def get_cse_tickers_df() -> pd.DataFrame: """Grab cse dataframe from exported xlsx sheet Returns: clean_df Dataframe with with randomly selected values. Data columns are as follows: ========== ==================================================================...
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import requests def push(command: str, f: str = "root", a: str = "cyberlab"): """ Push command to repo :param command : command for push on repository :param f: folder for push (default : root ) :param a: author of command (default: cyberlab) :return: Message of success or error ...
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def tf_slim_with_softmax(inp): """ Function for returning tf slim model ending in softmax """ net = slim.conv2d(inp, 32, [3, 3]) net = slim.batch_norm(net, decay=.7, epsilon=.65, is_training=False) net = slim.conv2d(net, 16, [2, 2]) net = slim.batch_norm(net, decay=.6, epsilon=.25, is_training=False...
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import torch def compute_pairwise_distance(data_x, data_y=None, device=None): """ Args: data_x: numpy.ndarray([N, feature_dim], dtype=np.float32) data_y: numpy.ndarray([N, feature_dim], dtype=np.float32) Returns: numpy.ndarray([N, N], dtype=np.float32) of pairwise distances. ""...
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def tell(inp, *, user, message): """ Send messages to other users. Saves the message and delivers them to the target next time they're in the same channel with the bot. """ db.Tell.create( recipient=user, sender=inp.user, text=message, time=arrow.utcnow().timesta...
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def make_table_from_exploded_df(exploded_df: pd.DataFrame, row_heading_cols, column_heading_cols, dfs_dict=None, value_col: str = "text", concat_with: str = " | ", convert_numeric_items=False, sort_headers=True) -> pd.DataFrame: """ takes in the ex...
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from typing import Tuple def _calc_antihub_occurrence(k_occurrence: np.ndarray) -> Tuple[np.ndarray, float]: """Proportion of antihubs in data set. Antihubs are objects that are never among the nearest neighbors of other objects. Parameters ---------- k_occurrence: ndarray Reverse ne...
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def serv_gets(tn) -> str: """ Reads a string from the server. Keeps on reading with elabora_input() until it receives a non-command string. """ while command_queue.qsize() == 0: elabora_input(tn) #print('serv_gets', command_queue.qsize()) line = command_queue.get() #print('serv_...
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def simple_image_collection(im_glob, load_func=skimage.io.imread, conserve_memory=True, **load_func_kwargs): """ Load a collection of images. Parameters ---------- load_pattern : string or list If string, uses glob to generate list of files containing ima...
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def simmat_g(info, covmat, sub_id, chrinterest, save=False, stdsim=False, progress=False): """ Compute similarity matrices using gametic approach. Parameters ---------- info : class object A class object created using the function "datacheck" covmat : A list of pop cov matr...
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from datetime import datetime def dosdate(dosdate, dostime): """ `dosdate`: 2 bytes, little endian. `dostime`: 2 bytes, little endian. returns: datetime.datetime or datetime.datetime.min on error """ try: t = ord(dosdate[1]) << 8 t |= ord(dosdate[0]) day = t & 0b0000000...
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import logging def prepare_go_environ(): """Returns dict with environment variables to set to use Go toolset. Installs or updates the toolset if necessary. """ bootstrap(LAYOUT, logging.INFO) return get_go_environ(LAYOUT)
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def svn_wc_revert3(*args): """ svn_wc_revert3(char path, svn_wc_adm_access_t parent_access, svn_depth_t depth, svn_boolean_t use_commit_times, apr_array_header_t changelists, svn_cancel_func_t cancel_func, svn_wc_notify_func2_t notify_func, apr_pool_t pool) -> svn_error_t "...
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from urllib.parse import urlparse def get_domain(url: str) -> str: """ get domain from url by given Args: str type Return: str type, return domain if can get """ parsed_uri = urlparse(url) domain = '{uri.netloc}'.format(uri=parsed_uri) return domain
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def get_random_string(length): """Create a random string that is length-chars long comprised of upper, lower, and digits. """ char_pool = [c for c in ascii_letters + digits] char_list = [choice(char_pool) for _ in range(length)] return ''.join(char_list)
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def ScheduledGradOptimizer(loss, baseLearningRate, momentum=0.9, decaySteps=1000, decayRate=0.5): """ Given the network loss, constructs the training op needed to train the network using exponential learning rate decay and Nesterov Accelerated Gradient Descent with momentum. Returns: the operat...
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def _get_global_gloo_group(): """ Return a process group based on gloo backend, containing all the ranks The result is cached. Returns: (group): pytorch dist group. """ return dist.group.WORLD
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def desired_caps(apk_path, apk_name, platform_version='4.4', device_name='Nexus_5X_API_19'): """Return capabilities related to emulator.""" return { 'platformName': 'Android', 'newCommandTimeout': 3000, 'autoGrantPermissions': 'True', 'platformVe...
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def filename_with_size(media, size): """Returns the filename with size, e.g. IMG1234.jpg, IMG1234-small.jpg""" # Strip any non-ascii characters. filename = media.filename.encode("utf-8").decode("ascii", "ignore") if size == 'original': return filename return ("-%s." % size).join(filename.rsp...
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from sympy.ntheory.modular import crt def _decipher_rsa_crt(i, d, factors): """Decipher RSA using chinese remainder theorem from the information of the relatively-prime factors of the modulus. Parameters ========== i : integer Ciphertext d : integer The exponent component ...
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def circles(circle_1, circle_2): """ vvvv YOUR CODE STARTS HERE vvvv """ """ ^^^^ YOUR CODE ENDS HERE ^^^^ """ return message_out, overlap_out
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def test_defaults(): """ Test the default values for the @event decorator """ @event def f(): return "data" ce = f() assert ce["type"] == "parliament.response" assert ce["source"] == "/parliament/function" assert ce.data == "data"
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from typing import Any import dataclasses from enum import Enum def recurse_jsonify(d: Any) -> Any: """ Makes bytes objects and unhashable types into strings with 0x, and makes large ints into strings. """ if dataclasses.is_dataclass(d): new_dict = {} for field in dataclasses.field...
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def expand_node(node): """Returns a list of expanded nodes""" expanded_nodes = [] if(node.position=='L'): expanded_nodes.append(create_node(move_right(node.state,0,1), node, [0,1], node.depth + 1,'R')) expanded_nodes.append(create_node(move_right(node.state,0,2), node, [0,2], node.depth + 1,...
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def get_item(dictionary, key): """Return value from dictionary. Args: dictionary (dict): Dictionary to retrieve value from. key (str): Key to perform lookup. Returns: Value of key in dictionary. """ return dictionary.get(key)
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def trunc(x, out=None, where=True, dtype=None): """ Returns the truncated value of the input, element-wise. The truncated value of the scalar `x` is the nearest integer `i` which is closer to zero than `x` is. In short, the fractional part of the signed number `x` is discarded. Note: Numpy...
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from typing import Optional from typing import Mapping from typing import Any from typing import Collection import tqdm def upload_word2vec_embedding_file( path: str, *, package_name: str, package_version: str, extras: Optional[Mapping[str, Any]] = None, session: Option...
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def _convert_featuregroup_version_dict(featuregroups_version_dict): """ Converts a featuregroup->version dict into a list of {name: name, version: version} Args: :featuregroups_version_dict: Returns: a list of {featuregroup_name: name, version: version} """ parsed_featuregroup...
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import time import getpass def intro(objectlist, name): """setting up the introduction of the file and reporting the statements to the attribute list""" nid = 0 header = u"<?xml version=\"1.0\" encoding=\"UTF-8\"?>\n<gexf xmlns=\"http://www.gexf.net/1.2draft\" version=\"1.2\">\n" date = u" <meta lastmodifiedd...
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from typing import OrderedDict def index_schema_builder(table): """ Returns a dictionary loaded with all of the indexes available in the table. ``table`` must be an instance of TableSchema. .. note:: This function is automatically called for you and set to ``schema.databases[name].tables[...
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from typing import Tuple def rsa_keypair() -> Tuple[str, str]: """ Generate an RSA keypair with a key size of 2048 bits and an exponent of 65537. Serialize the public key in the the X.509 SubjectPublicKeyInfo/OpenSSL PEM public key format (RFC 5280). Serialize the private key in the PKCS#8 (RFC 34...
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def parse_proj(scores, gold=None): # pylint: disable=too-many-locals """ Parse using Eisner's algorithm. """ nr, nc = np.shape(scores) if nr != nc: raise ValueError("scores must be a squared matrix with nw+1 rows") N = nr - 1 # Number of words (excluding root). # Initialize CK...
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def root_block_fn_for_beta_variant(net): """Gets root_block_fn for beta variant. ResNet-v1 beta variant modifies the first original 7x7 convolution to three 3x3 convolutions. Args: net: A tensor of size [batch, height, width, channels], input to the model. Returns: A tensor after three 3x3 convolut...
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def get_layout_size(layout: qc3const.PyCapsule = PANGO_LAYOUT) -> tp.Tuple[int, int]: """Returns text layout size :param layout: (PyCapsule) Pango source layout :return: (tuple) text layout size """ return _libpango.get_layout_pixel_size(layout)
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import io def markdown_table(headings, records, fields=None, alignment=None, file=None): """Generate a Doxygen-flavor Markdown table from records. See https://stackoverflow.com/questions/13394140/generate-markdown-tables file -- Any object with a 'write' method that takes a single string para...
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import functools def as_points(f): """Decorator utility to help coerce arguments as points """ @functools.wraps(f) def wrapper(*ps): return f(*(coerce_to_point(p) for p in ps)) return wrapper
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def _should_save_report_msg(msg): """Returns True if the given ForwardMsg should be serialized into a shared report. We serialize report & session metadata and deltas, but not transient events such as upload progress. """ msg_type = msg.WhichOneof("type") return msg_type == "initialize" o...
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