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def _get_rnn_cell(mode, num_layers, input_size, hidden_size, dropout, weight_dropout, var_drop_in, var_drop_state, var_drop_out, skip_connection, proj_size=None, cell_clip=None, proj_clip=None): """create rnn cell given specs Parameters ---------- m...
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def parametrize_tir(cashflows, days_to_flows, day_count_base=365): """ Return the function for a net present value with a discount rate as the only variable for a set of time-determined cashflows. Defines a function using a particular trick found at stackov...
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def fn_init(Kernel, Ker_weights, range, device): """ this function simply set the args for our main 'fn' function. """ def fn_with_specified_args(inputs, val): return rkhs_fn(inputs, val, Kernel, Ker_weights, range, device) return fn_with_specified_args
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def show(tr: TraceLike, fix_width=False): """show a trace""" get_value = lambda v: v if isinstance(v, Tensor) else v.value ten_show = lambda v: tensor_utils.show(get_value(v), fix_width=fix_width) return "{" + "; ".join([f"'{k}'-➢{ten_show(v)}" for k, v in tr.items()]) + "}"
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def describeTreeProductions(tree, links, offset=0): """ Write out the PCFG node productions """ s = "%s ->" % tree.node for ch in tree: s += " %s" % ch.node return s
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def orlib_load_instance(instance_name, reader, formulation): """ Parameters ---------- instance_name: str Name of instance file reader: function (file) -> params: tuple Takes a file-like object and returns the read parameters formulation: function (params: tuple) -> scip.model ...
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from re import T def correlation(i, kn=4, kp=4): """Feature selection based on pairwise correlation Args: i (int): index of the country we are modeling tao (float): critical value (default = 0.4) Returns: JH (array): An array with the regressors (incl. self) """ corr_i = ...
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def bumped(repo, subset, x): """``bumped()`` Mutable changesets marked as successors of public changesets. Only non-public and non-obsolete changesets can be `bumped`. """ # i18n: "bumped" is a keyword getargs(x, 0, 0, _("bumped takes no arguments")) bumped = obsmod.getrevs(repo, 'bumped') ...
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def discovery_info_from_headers_and_request( info_with_req: CaseInsensitiveDict, ) -> dict[str, str]: """Convert headers and description to discovery_info.""" info = {DISCOVERY_MAPPING.get(k.lower(), k): v for k, v in info_with_req.items()} if ATTR_UPNP_UDN not in info and ATTR_SSDP_USN in info: ...
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def findH(g_h, cs, Q, S, rh): """ Calculates discharge difference for a given height of water. The minimum of this function is the height of water with a prescribed discharge. Parameters ---------- g_h : guess height [m] cs : cross-section Q : discharge [m^3/s] S : slope rh : roughness height (z_0) [m] Re...
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def nextditem(s): """Tries to guess the next item on the sequence 's' by using a table of divisions. This method will fail if the sequence doesn't provide enough information, and will assume that the latest sequence should remain constant""" ds = getdivs(s) r = ds[-1][-1] for i in r...
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import os import shutil def import_petab_problem( petab_problem: petab.Problem, model_output_dir: str = None, model_name: str = None, force_compile: bool = False, **kwargs) -> 'amici.Model': """ Import model from petab problem. :param petab_problem: A petab...
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import subprocess import os def determineRevision(dir_path): """ Determine the revision of the given directory in a version control system. """ # Check for SVN repository try: svnProcess = subprocess.Popen( ["svnversion", "--committed", dir_path], env={"LANG": "C"},...
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from typing import Optional import itertools def ensure_sequence_of_iterables(obj, length: Optional[int] = None): """Ensure that ``obj`` behaves like a (nested) sequence of iterables. If length is provided and the object is already a sequence of iterables, a ValueError will be raised if ``len(obj) != len...
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def eval_shift_distance(shift, reg_matches): """ Compute the distance in characters a match has been shifted over. "reg_matches" is the set of regular matches as returned by find_regular_matches(). The distance is defined as the number of characters between the shifted match and the closest regula...
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import unittest def require_tf(test_case): """ Decorator marking a test that requires TensorFlow, graphviz and pydot. These tests are skipped when TensorFlow, graphviz and pydot are installed. """ if not is_tf_available() or not is_pydot_available() or not is_graphviz_available(): return...
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from re import DEBUG import time import os def write_line(raw_line, inverter_addr, discovery): """Parse the values returned by the inverter and write them to file""" # Find the start token start_index = raw_line.find('*') if start_index == -1: if DEBUG: print("Could not find the st...
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def get_common_basename(paths): """ Return common "basename" (or "suffix"; is the last component of path) in list "paths". Or return None if all elements in paths do not share a common last component. Generate an error if any path ends with a slash.""" if len(paths) == 0: return None # get...
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def get_recent_safe_block(time, sta, chan, margin_seconds=10, preferred_len_seconds=120, min_len_seconds=60, arrival_window_seconds=1200): """ Get a block of time preceding the specified time, and ending at least margin_seconds before that time, for which waveform data exists, and during which there are no recorded...
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def f_punct(w_list): """ :param w_list: word list to be processed :return: w_list with punct and number filter out """ return [word for word in w_list if word.isalpha()]
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from typing import Optional from typing import Union from typing import Tuple import torch def max_mpc( x: MPCTensor, dim: Optional[Union[int, Tuple[int]]] = None, keepdim=False, ) -> Union[MPCTensor, Tuple[MPCTensor, MPCTensor]]: """Compute the maximum value for an MPCTensor. Args: x (MP...
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def even(n: int) -> bool: """ Check that given number is even. >>> [(n, even(n)) for n in range(5)] [(0, True), (1, False), (2, True), (3, False), (4, True)] """ return n % 2 == 0
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def is_owner(org): """ Function for checking if a user's org has ownership rights SINCE WE ARE KEEPING ACCESS CONTROL SIMPLE, WE ARE DEFAULTING THIS TO TRUE :param str org: An organization :return bool: whether the organization matches the current user or the group of admins """ return True ...
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import sys import logging import traceback def main(): """ Entry point for command 'impact-vastart'. """ args = parser.parse_args(sys.argv[2:]) if args.verbosity == 1: logging.getLogger().setLevel(logging.INFO) elif args.verbosity > 1: logging.getLogger().setLevel(logging.DEBU...
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import argparse def set_args(): """设置训练模型所需参数""" parser = argparse.ArgumentParser() parser.add_argument('--device', default='0', type=str, help='') parser.add_argument('--train_file_path', default='task_data/train_defect_diagnosis.json', type=str, help='') parser.add_argument('--dev_file_path', de...
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def linear_model_loss_regularized_dx_lp(w, x, y, reg_coeff, norm_type): """Penalize by ||dL/dx||.""" loss_and_dloss_dx_f = jax.value_and_grad(linear_model_loss, argnums=1) loss, dloss_dx = loss_and_dloss_dx_f(w, x, y) reg = norm_f(dloss_dx, norm_type) return loss + reg_coeff * reg
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def cross_covariance(y, ym, z, zm, b): """ Computes the cross-covariance matrix between the rows of matrix `y` with those of matrix `z`. The method of Overlap Batch Mean (OBM) is employed with blocks of size `b`. """ Sy = _SumOfDeviationsPerBlock(y, ym, b) Sz = _SumOfDeviationsPerBlock(z, zm, b...
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import requests def get_facilities_from_ridb(latitude: float, longitude: float, radius: int): """ Calls RIDB API with a location and search radius, and returns campground names and RDIB facility ID strings. :param latitude: Latitude of coordinate to center the search around :param longitude: Long...
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def api_get_logs(log_type, num_lines): """API to return the logs of appropriate type and logging window based on user selection. Args: log_type (str): Log type attribute name pointing to the log file location. Defined in the constants file. num_lines (int): Number...
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import sys import re def collect_local_modules(module_name, hooks_module='.hooks'): """collect_local_modules.""" if getattr(sys, 'frozen', False) or not IS_DEBUG: return def is_invaild_module_name(name): return not is_string(name) or \ re.match(r'^(\.[a-zA-Z0-9_-]{1,}){1,}$',...
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import random def sample_contact_points(contact_points, num_samples, get_idx=False): """Sampling contact points for the specified number Parameters ---------- contact_points : list[list[list[float], list[float]]] num_samples : int Returns ------- contact_points : list[list[list[float...
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import logging def get_messages_from_folder(folder, message_id, **kwargs): """Return list of messages matching message id in the given folder.""" _logger = kwargs.get("logger") or logging message_id = check_message_id_format(message_id) # We want to use filter WITHOUT conditional QuerySet queries... ...
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def IsUUID(uuid: str) -> bool: """Verifies a string has the following valid RFC UUID format: 'xxxxxxxx-xxxx-xxxx-xxxx-xxxxxxxxxxxx'. Args: uuid (str): value that needs to be verified. Return: (boolean): true or false to if the value is valid. """ if len(uuid) ...
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from astropy.io import fits def ref_from_image(input_image, reffile_lookup): """ Return a list of reference filenames, as defined in the primary header of the given input image, necessary for calibration. Parameters ---------- input_image : str FITS image to extract info from. re...
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def shufflelr(x, width, dataset='mpii'): """ flip coords """ if dataset == 'mpii': matchedParts = ( [0,5], [1,4], [2,3], [10,15], [11,14], [12,13] ) elif dataset == 'h36m': matchedParts = ( [1,4], [2,5], [3,6], [11,14], ...
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def _compute_hal9000_md5(observable: Observable) -> str: """Given an Observable, return the hexdigest of the MD5 computation used for hal9000.""" md5_hasher = md5() md5_hasher.update(observable.type.encode('utf-8', errors='ignore')) md5_hasher.update(observable.value.encode('utf-8', errors='ignore')) ...
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import json def get_context(): """ Retreive the URL parameters from the current request context """ args = request.args int_or_none = lambda x: int(x) if x is not None else None dict_or_none = lambda x: json.loads(x) if x is not None else None try: context = RequestContext( i...
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def log_decoding_CanonLog3( clog3: FloatingOrArrayLike, bit_depth: Integer = 10, in_normalised_code_value: Boolean = True, out_reflection: Boolean = True, ) -> FloatingOrNDArray: """ Defines the *Canon Log 3* log decoding curve / electro-optical transfer function. Parameters -------...
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def line_intersection(A, B, C, D): """Assumes line segments AB vs. CD actually cross (must determine this separately), where points A - D have fields 'x' and 'y' e.g. a Point2D object. Uses algorithm from: http://www.bryceboe.com/2006/10/23/line-segment-intersection-algorithm/ and http://pa...
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def get_project_list_from_layout(request, layout_id): """ Return project ids, names and get-branch-list url """ if request.method != 'GET': return res.get_only_get_allowed({}) layout = BluesteelLayoutEntry.objects.filter(id=layout_id).first() if layout is None: return res.get_response(4...
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def percent_yield(actual_yield, theoretical_yield): """Finds theoretical_yield\n actual_yield:\n\tThe yield given in the equation\n theoretical_yield:\n\tThis yield can be calculated with the theoretical_yield() function""" yielded = (actual_yield / theoretical_yield) * 100 return yielded
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def name_propagation_inside_basic_block(ctx: FrozenBuildContext, instructions: list[Instruction]) -> tuple[list[Instruction], bool]: """ ``` x = L.message1 M.print_flush(y) ``` ⇓ ``` M.print_flush(L.message1) ``` """ basic_blocks, _cfg = _make_control_flow_graph(instructions)...
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def is_na(value): """ Return True if value is None or NaN """ return value is None or is_nan(value)
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def url_auth_split(url): """extract authentication information from the given URL >>> url_auth_split('/path/to.git') == ('file:///path/to.git', None, None) True >>> result = ('ssh://git.example.com:2222/path/to.git', None, None) >>> url_auth_split('ssh://git.example.com:2222/path/to.git') == result...
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def read_block(f, offset, length, delimiter=None): """ Read a block of bytes from a file Parameters ---------- fn: string Path to filename on HDFS offset: int Byte offset to start read length: int Number of bytes to read delimiter: bytes (optional) Ensure rea...
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from typing import Union import os from pathlib import Path def make_db_path(in_path: Union[str, os.PathLike, Path]) -> str: """ Returns the provided path resolved and as a String so APSW can understand it. Peewee (or APSW) seems to not follow the `os.PathLike`-Protocol. Args: in_path (Union...
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import subprocess def subprocess_cmd(cmd): """execute a subprocess @param cmd: command to be executed @type cmd: string @return: result of the command @rtype : string @raise e: None """ try: process = subprocess.Popen(cmd, stdout=subprocess.PIPE, shell=True) pr...
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def iou_from_mask(pred, gt): """ Compute intersection over the union. Args: pred: Predicted mask gt: Ground truth mask """ pred = pred.astype(np.bool) gt = gt.astype(np.bool) true_negatives = np.count_nonzero(np.logical_and(np.logical_not(gt), np.logical_not(pred))) fals...
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def md5file(filename): """ Re-implementation of md5sum in python. Return the hex digest of a file without loading it all into memory. By Nick Craig-Wood <nick@craig-wood.com> """ fh = open(filename) digest = md5.new() while 1: buf = fh.read(4096) if buf == "": ...
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def contains_all_required_firewalls(firewall, topology): """ Check that the list of firewall settings contains all necessary firewall settings """ for src, row in enumerate(topology): for dest, col in enumerate(row): if src == dest: continue if col == 1 an...
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def truncation(parent_population, child_population, parents_scores, children_scores, elitism_rate): """Selects next generation using elitism truncation selection for single objective. This function implements truncation selection while ensuring elitism to select a specific number of memb...
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def locations__search(request): """ Renders the locations page, after a search has been made. Behaviour will vary, depending on the number of results, if there are errors... """ context = {'from_search': True, 'geolocation': request.session.get('geolocation'), 'location_error'...
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def latest_object_or_none(model_class, field_name=None): """Identical to Model.latest, except instead of throwing exceptions, this returns None. """ try: return model_class.objects.latest(field_name) except (model_class.DoesNotExist, model_class.MultipleObjectsReturned): return None
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def _get_upload_headers(first_byte, file_size, chunk_size): """Prepare the string for the POST request's headers.""" content_range = 'bytes ' + \ str(first_byte) + \ '-' + \ str(first_byte + chunk_size - 1) + \ '/' + \ str(file_size) return {'Content-Range': content...
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from typing import List def get_timers_matching_utterance( utterance: str, timers: List[CountdownTimer], regex_path: str ) -> List[CountdownTimer]: """Match timers to an utterance that matched a timer intent.""" matcher = TimerMatcher(utterance, timers, regex_path) matcher.match() return matcher....
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import logging import uuid def load_data(): """ read mnist data from file x (60000, 28, 28) y (60000,) split each record into leader_part and follower_part and allocate example_id for each record """ logging.info("Load mnist_x.npy and mnist_y.npy") x = np.load('mnist_x.npy') y...
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def dict_equal(dictionary, other_dictionary): """Compare two dict with :class:`numpy.ndarray` value handling. Comparison is made in two parts: * We first check that both dict have the same keys. * If they do we then compare each value pair and lazily return ``False`` if any comparison fails. Note:...
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def get_Wiener(ase_obj): """ Example crystal structure descriptor: https://en.wikipedia.org/wiki/Wiener_index defined per a unit cell """ return np.sum(ase_obj.get_all_distances()) * 0.5
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import copy def init_param_cont(args): """ init_param_cont(args) Initializes parameter containers. Returns args: - in the following nametuples: analyspar, sesspar, stimpar, autocorr, permpar, quantpar, roigrppar, tcurvpar - in the following dic...
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from typing import Optional def _box_as_indexlike( dt_array: ArrayLike, utc: Optional[bool] = None, name: Label = None ) -> Index: """ Properly boxes the ndarray of datetimes to DatetimeIndex if it is possible or to generic Index instead Parameters ---------- dt_array: 1-d array A...
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from typing import Iterable import pandas import numpy def categorical_encode_series_to_sparse_csc_matrix( series: Iterable, reduced_rank: bool = False ) -> spsparse.csc_matrix: """ Categorically encode (via dummy encoding) a `series` as a sparse matrix. Args: series: The iterable which shoul...
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def setup_arg_parser(): """ Sets up argument parser for python scripts. Returns: arg_parser (ArgumentParser): Argument parser updated with probabilistic detectron args. """ arg_parser = default_argument_parser() arg_parser.add_argument( "--dataset-dir", type=str, ...
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def SegmentConst_get_decorator_type_name(): """SegmentConst_get_decorator_type_name() -> std::string""" return _RMF.SegmentConst_get_decorator_type_name()
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def write(sec): """Write MT section for MF5 Parameters ---------- sec : `sandy.utils.Section` dictionary with MT section for MF5 Returns ------- `str` section content in a single string """ text = write_cont(sec["ZA"], sec["AWR"], 0, 0, len(sec["PDISTR"]), 0...
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def emissions(run_start_year, run_end_year, dt, rcp, add_start = 0, add_end = 0, c_add = 0, ch4_add = 0, n2o_add = 0): """ Take annual emissions from a RCP scenario and return emissions by specified start date, end date, and time step """ run_years = run_end_year - run_start_year + 1 ...
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def cv2_fn_wrapper(cv2_fn, mat, *args, **kwargs): """" A wrapper for cv2 functions Data in channel first format are adjusted to channel last format for cv2 functions """ mat_shape = mat.shape x_size = mat_shape[-2] y_size = mat_shape[-1] _mat = mat.reshape((-1, x_size, y_size)...
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import os def build_ipc_uri(service_id: str) -> str: """Build ipc uri for the given service.""" return f"ipc://{os.path.join(user_cache_dir('npc-engine'), service_id)}"
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def initial_time(): """ Real Name: INITIAL TIME Original Eqn: 0 Units: Day Limits: (None, None) Type: constant Subs: None The initial time for the simulation. """ return 0
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import shutil def slay_the_weaker(dic, key, value): """Delete the less-up-to-date directory by the same name, if any. Parameters: dic -- Dictionary of absolute paths minus version numbers to version numbers key -- String representing the absolute path minus version number ...
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def render_template(filename, **context): """ Render mail template. Returns rendered text """ return jinja_env.get_template(filename).render(**context)
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from typing import Union from operator import is_ def has_text(expected: Union[Matcher, str]): """ Test if ``WebElement`` instance has text. :param expected: expected text :return: ``Matcher`` instance """ return HasText(is_(expected))
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def plot_hate_speech( df: pd.DataFrame, title: str = None, height: int = 300, label_col: str = "label" ) -> Figure: """ Show the percentage of estimated hate speech sentences. Args: df (pd.DataFrame): Dataframe with the outputs of a hate speech model. title (str): ...
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from typing import OrderedDict def clean_weights(weights: OrderedDict, portfolio, first_prices, latest_prices): """Remove low weights as not significant contributors to portfolio performance""" sum_of_weights = sum(map(lambda t: t[1], weights.items())) assert sum_of_weights - 1.0 < 1e-6 cw = OrderedDi...
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import matplotlib.pyplot as plt import numpy import os def run_convergence(setup, ref_list, do_export=False, save_plot=False, **options): """Runs test for a list of refinements and computes error convergence rate""" l2_err = [] for r in ref_list: l2_err.append(run(setup, r, do_export=do_export, **...
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import matplotlib.pyplot as plt def showContactMap(enm, *args, **kwargs): """Show Kirchhoff matrix using :func:`~matplotlib.pyplot.spy`.""" if not isinstance(enm, GNMBase): raise TypeError('model argument must be an ENM instance') kirchhoff = enm.getKirchhoff() if kirchhoff is None: L...
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def helper_find_anagrams(s, n, anagrams_list): """ :param s: stands for the input word :param n: n is a counter for the number of anagrams :param anagrams_list: to collect all anagrams we want :return: n, anagrams_list """ # first to get the list of each characters of the input word 's' ...
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def get_metadata_values( file, metadata ): """ Gets metadata values from a file path. :param file: The file path to search. :param metadata: Metadata from the file name is turned into MultiIndex columns. + If list, use standard keywords to include in index [ 'sample' ] + If Dictionary, ...
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def posECIfromECEF(posECEF_, second): """ Args: posECEF_ (np.array 3x1) : position in ECEF coordinate [m, m, m] second (double) : time from reference time [s] Return: (np.array 3x1) : position in ECI coordinate [m, m, m] """ return np.matmul(dcmECEF2ECI(second), posECEF_)
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def get_prediction(url,topics_count=10): """ Send an url to xplr and gets the result of the prediction as labelled topics, extracted content and words) :param url: the url to be predicted :param topics_count: number of topics expected :returns: a tuple (title, topics) where title is extracted b...
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def startup(name): """ Start Traffic Server on the local node. .. code-block:: yaml startup_ats: trafficserver.startup """ ret = {"name": name, "changes": {}, "result": None, "comment": ""} if __opts__["test"]: ret["comment"] = "Starting up local node" return...
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def calc_ma(datas, ma_list): """ 根据 ma_list 计算 ma 数值 calc :param datas: dataframe :param ma_list: string list :return: """ try: for ma in ma_list: datas['ma%d' % ma] = ta.SMA(datas['close'].values, ma) except Exception as e: print(e) return datas
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def split_args(arguments): """ ","구분자로 split 리턴: list """ try: return arguments.split(",") except UserDefinedException as e: raise UserDefinedException(f"[-] split_args Error split: {e}")
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def Data(Objectid): """ Parameters ---------- Objectid : String, ZTF ID Takes in ZTF object id and makes a dataframe of it's lightcurve data Returns ------- DataFrame with lightcurve data """ Supernovadf = pd.DataFrame(columns = ["mjd", "band", "magnitude", "error", ...
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def init_line_complex(p): """ initialize 1D complex on the line Input: p - number of 0-simplices Will add (p-1) 1-simplices """ f = d.Filtration() for i in range(p-1): c = d.closure([d.Simplex([i, i+1])], 1) for j in c: f.append(j) return f
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from datetime import datetime def prettify_time(time_string: str) -> str: """Fix timestamps to a better format.""" if time_string: parsed = datetime.strptime(time_string, "%Y-%m-%dT%H:%M:%S.%fZ") return datetime.strftime(parsed, "%Y-%m-%d %H:%M:%S") else: return 'N/A'
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def format_uptime(uptime_in_seconds): """Format number of seconds into human-readable string. :param uptime_in_seconds: The server uptime in seconds. :returns: A human-readable string representing the uptime. >>> uptime = format_uptime('56892') >>> print(uptime) 15 hours 48 min 12 sec """ ...
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def load_lines(file_name, fields=["lineID", "characterID", "movieID", "character", "text"], delimiter=" +++$+++ "): """ Args: file_name (str): file to load fields (set<str>): fields to extract delimiter (str): delimiter string Return: dict<dict<s...
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def string_camelcase(string): """ Convert a word to its CamelCase version and remove invalid chars >>> string_camelcase('lost-pound') 'LostPound' >>> string_camelcase('missing_images') 'MissingImages' """ return CAMELCASE_INVALID_CHARS.sub('', string.title())
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from nltk.tokenize import word_tokenize from typing import DefaultDict import torch from typing import Optional from typing import Tuple from typing import List def prepare_untagged_data( data_path: str, word_to_ix: DefaultDict[str, int], device: torch.device, tokenizer: Optional[BertT...
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def chunker(arrays, chunk_size): """Split the arrays into equally sized chunks :param arrays: (N * L np.array) arrays of sentences :param chunk_size: (int) size of the chunks :return chunks: (list) list of the chunks, numpy arrays""" chunks = [] # sentence length sent_len = len(arrays[0])...
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from typing import Optional def standardization(data: Optional[list or np.array], decimals: None or int = None): """ 对一系列数据进行标准化处理,常用的方法是z-score标准化,处理后数据均值为0,标准差为1。 Args: data (list or np.array): 需要被标准化的数据。 decimals (None or int): 归一化后,数值保留的精度(小数位数),默认为None,不开启 Returns: np.ar...
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def scale(img): """ scaling """ img = (img - np.array([123.68, 116.779, 103.939])) / np.array([58.393, 57.12, 57.375]) # img = (img - tf.constant([123.68, 116.779, 103.939])) / tf.constant([58.393, 57.12, 57.375]) return img
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def set_pos(g, gtype='bipartite', **kwargs): """ Sets the position of nodes for plots in resultdisp.graph using a graphical tool. Note: make sure matplotlib is set to plot in an external window (e.g using '%matplotlib qt) Parameters ---------- g : networkx graph or model or function nor...
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def fuzzy_replace( words_list, query_list, threshold=81, return_string=True, scorer=fuzz.QRatio, whitelist=False): """ Function to perform fuzzy replacing based on `words_list` (vocabulary) and similarity `threshold`. Args: words_list (list): ...
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def get_type_lists(frame, rejects=['Id', 'ID','id'],frame_type='h2o'): """Creates lists of numeric and categorical variables. :param frame: The frame from which to determine types. :param rejects: Variable names not to be included in returned lists. :param frame_type: The type of frame being used. Acc...
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def calc_CTheatload(BldgDemand, BldgToCTs, CT_catalog, t_from=None, t_to=None): """Calculates the CT heat load to be passed to simulate_CT() by allocating the total heat load to all the CTs by their capacity (i.e. no smart scheduling of CTs accdg. to load). PARAMETERS: BldgDemand DataFrame...
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def dmi(sst, frequency='monthly', apply_filter=False, base_period=None, area_weight=False, lat_name=None, lon_name=None, time_name=None): """Calculate dipole mode index. The DMI introduced by Saji et al is defined as the difference in SST anomalies between the western and south-eastern tropical...
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from typing import Optional from typing import Tuple def ptr_to_fresh(c : Contract, ty : LLVMType, name : Optional[str] = None) -> Tuple[FreshVar, SetupVal]: """Add to``Contract`` ``c`` an allocation of a pointer of type ``ty`` initialized to an unknown fresh value. :returns A fresh variable bound to the...
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import signal def fit_continuum(wav, spec, func='polynomial', order=3, nit=5, rej_low=2.0, rej_high=2.5, grow=1, med_filt=0, percentile_low=0.0, percentile_high=100.0, min_points=10, verbose=False): """ Continuum fitting re-implemented from IRAF's 'continu...
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def select_reads_from_bam(input_bam_fofn_fn, rawread_to_contigs_fn, rawread_ids_fn, sam_dir): """Write ctg.sam files into cwd, for each 'ctg' read in input BAMs. """ read_partition = {} read_to_ctgs = {} print "rawread_ids_fn:", repr(rawread_ids_fn) print "rawread_to_contigs_fn:", repr(rawr...
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