text stringlengths 5 22M | id stringlengths 12 177 | metadata dict | __index_level_0__ int64 0 1.37k |
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# coding=utf-8
# Copyright 2020-present, AllenAI Authors, University of Illinois Urbana-Champaign,
# Intel Nervana Systems and the HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the ... | AdaMix/examples/research_projects/movement-pruning/emmental/modules/binarizer.py/0 | {
"file_path": "AdaMix/examples/research_projects/movement-pruning/emmental/modules/binarizer.py",
"repo_id": "AdaMix",
"token_count": 2366
} | 38 |
#! /usr/bin/env python3
# coding=utf-8
# Copyright (c) 2019 Uber Technologies, Inc.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless ... | AdaMix/examples/research_projects/pplm/run_pplm.py/0 | {
"file_path": "AdaMix/examples/research_projects/pplm/run_pplm.py",
"repo_id": "AdaMix",
"token_count": 13228
} | 39 |
# the proper usage is documented in the README, you need to specify data_dir, output_dir and model_name_or_path
# run ./finetune.sh --help to see all the possible options
python finetune.py \
--learning_rate=3e-5 \
--fp16 \
--gpus 1 \
--do_train \
--do_predict \
--n_val 1000 \
--val_check_in... | AdaMix/examples/research_projects/seq2seq-distillation/finetune.sh/0 | {
"file_path": "AdaMix/examples/research_projects/seq2seq-distillation/finetune.sh",
"repo_id": "AdaMix",
"token_count": 138
} | 40 |
#!/usr/bin/env bash
python run_asr.py \
--output_dir="./wav2vec2-large-lv60-100h" \
--num_train_epochs="30" \
--per_device_train_batch_size="16" \
--per_device_eval_batch_size="16" \
--evaluation_strategy="steps" \
--save_total_limit="3" \
--save_steps="500" \
--eval_steps="100" \
--logging_steps="50" \
--learning_rate... | AdaMix/examples/research_projects/wav2vec2/finetune_large_lv60_100.sh/0 | {
"file_path": "AdaMix/examples/research_projects/wav2vec2/finetune_large_lv60_100.sh",
"repo_id": "AdaMix",
"token_count": 255
} | 41 |
# Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicabl... | AdaMix/examples/tests/trainer/test_trainer_ext.py/0 | {
"file_path": "AdaMix/examples/tests/trainer/test_trainer_ext.py",
"repo_id": "AdaMix",
"token_count": 3774
} | 42 |
<jupyter_start><jupyter_text>**How to benchmark models with Transformers**With ever-larger language models, it is no longer enough to just compare models on their performance on a specific task. One should always be aware of the computational cost that is attached to a specific model. For a given computation environmen... | AdaMix/notebooks/05-benchmark.ipynb/0 | {
"file_path": "AdaMix/notebooks/05-benchmark.ipynb",
"repo_id": "AdaMix",
"token_count": 11981
} | 43 |
# this is the process of uploading the updated models to s3. As I can't upload them directly to the correct orgs, this script shows how this is done
# Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in comp... | AdaMix/scripts/fsmt/s3-move.sh/0 | {
"file_path": "AdaMix/scripts/fsmt/s3-move.sh",
"repo_id": "AdaMix",
"token_count": 2133
} | 44 |
# This file is adapted from the AllenNLP library at https://github.com/allenai/allennlp
# Copyright 2020 The HuggingFace Team and the AllenNLP authors. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may o... | AdaMix/src/transformers/benchmark/benchmark_utils.py/0 | {
"file_path": "AdaMix/src/transformers/benchmark/benchmark_utils.py",
"repo_id": "AdaMix",
"token_count": 16379
} | 45 |
# coding=utf-8
# Copyright 2018 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable... | AdaMix/src/transformers/convert_slow_tokenizers_checkpoints_to_fast.py/0 | {
"file_path": "AdaMix/src/transformers/convert_slow_tokenizers_checkpoints_to_fast.py",
"repo_id": "AdaMix",
"token_count": 2078
} | 46 |
# coding=utf-8
# Copyright 2018 The Google AI Language Team Authors and The HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a cop... | AdaMix/src/transformers/generation_tf_utils.py/0 | {
"file_path": "AdaMix/src/transformers/generation_tf_utils.py",
"repo_id": "AdaMix",
"token_count": 26353
} | 47 |
from torch import nn
from transformers.activations import get_activation
class Adapter(nn.Module):
def __init__(self, dim, r, act):
super().__init__()
self.adapter_A = nn.Linear(dim, r)
self.act = get_activation(act)
self.adapter_B = nn.Linear(r, dim)
def forward(self, x, resi... | AdaMix/src/transformers/models/adapter.py/0 | {
"file_path": "AdaMix/src/transformers/models/adapter.py",
"repo_id": "AdaMix",
"token_count": 204
} | 48 |
# coding=utf-8
# Copyright 2021 The Fairseq Authors and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/... | AdaMix/src/transformers/models/bart/modeling_tf_bart.py/0 | {
"file_path": "AdaMix/src/transformers/models/bart/modeling_tf_bart.py",
"repo_id": "AdaMix",
"token_count": 30206
} | 49 |
# Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicabl... | AdaMix/src/transformers/models/bert/convert_bert_original_tf2_checkpoint_to_pytorch.py/0 | {
"file_path": "AdaMix/src/transformers/models/bert/convert_bert_original_tf2_checkpoint_to_pytorch.py",
"repo_id": "AdaMix",
"token_count": 4716
} | 50 |
# coding=utf-8
# Copyright 2021 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless r... | AdaMix/src/transformers/models/convbert/modeling_convbert.py/0 | {
"file_path": "AdaMix/src/transformers/models/convbert/modeling_convbert.py",
"repo_id": "AdaMix",
"token_count": 23815
} | 51 |
# coding=utf-8
# Copyright 2019 The Google AI Language Team Authors and The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICEN... | AdaMix/src/transformers/models/electra/modeling_tf_electra.py/0 | {
"file_path": "AdaMix/src/transformers/models/electra/modeling_tf_electra.py",
"repo_id": "AdaMix",
"token_count": 26929
} | 52 |
# coding=utf-8
# Copyright 2019-present CNRS, Facebook Inc. and the HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#... | AdaMix/src/transformers/models/flaubert/modeling_flaubert.py/0 | {
"file_path": "AdaMix/src/transformers/models/flaubert/modeling_flaubert.py",
"repo_id": "AdaMix",
"token_count": 7202
} | 53 |
# coding=utf-8
# Copyright 2018 The OpenAI Team Authors and HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License... | AdaMix/src/transformers/models/gpt2/modeling_gpt2.py/0 | {
"file_path": "AdaMix/src/transformers/models/gpt2/modeling_gpt2.py",
"repo_id": "AdaMix",
"token_count": 24860
} | 54 |
# coding=utf-8
# Copyright 2021 The I-BERT Authors (Sehoon Kim, Amir Gholami, Zhewei Yao,
# Michael Mahoney, Kurt Keutzer - UC Berkeley) and The HuggingFace Inc. team.
# Copyright (c) 20121, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use t... | AdaMix/src/transformers/models/ibert/modeling_ibert.py/0 | {
"file_path": "AdaMix/src/transformers/models/ibert/modeling_ibert.py",
"repo_id": "AdaMix",
"token_count": 24187
} | 55 |
# coding=utf-8
# Copyright 2020 The Allen Institute for AI team and The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2... | AdaMix/src/transformers/models/longformer/modeling_tf_longformer.py/0 | {
"file_path": "AdaMix/src/transformers/models/longformer/modeling_tf_longformer.py",
"repo_id": "AdaMix",
"token_count": 54705
} | 56 |
# coding=utf-8
# Copyright 2021 The Facebook AI Research Team Authors and The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LIC... | AdaMix/src/transformers/models/mbart/tokenization_mbart50.py/0 | {
"file_path": "AdaMix/src/transformers/models/mbart/tokenization_mbart50.py",
"repo_id": "AdaMix",
"token_count": 6259
} | 57 |
# coding=utf-8
# Copyright 2018 The Google AI Language Team Authors and The HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a cop... | AdaMix/src/transformers/models/mobilebert/modeling_tf_mobilebert.py/0 | {
"file_path": "AdaMix/src/transformers/models/mobilebert/modeling_tf_mobilebert.py",
"repo_id": "AdaMix",
"token_count": 32803
} | 58 |
# coding=utf-8
# Copyright 2018 The Open AI Team Authors and The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# ... | AdaMix/src/transformers/models/openai/tokenization_openai_fast.py/0 | {
"file_path": "AdaMix/src/transformers/models/openai/tokenization_openai_fast.py",
"repo_id": "AdaMix",
"token_count": 1111
} | 59 |
# coding=utf-8
# Copyright (c) 2020, VinAI Research and the HuggingFace Inc. team.
# Copyright 2018 The Open AI Team Authors and The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of th... | AdaMix/src/transformers/models/phobert/tokenization_phobert.py/0 | {
"file_path": "AdaMix/src/transformers/models/phobert/tokenization_phobert.py",
"repo_id": "AdaMix",
"token_count": 6318
} | 60 |
# coding=utf-8
# Copyright 2020, The RAG Authors and The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless r... | AdaMix/src/transformers/models/rag/configuration_rag.py/0 | {
"file_path": "AdaMix/src/transformers/models/rag/configuration_rag.py",
"repo_id": "AdaMix",
"token_count": 3771
} | 61 |
# coding=utf-8
# Copyright 2018 The Google AI Language Team Authors and The HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a cop... | AdaMix/src/transformers/models/roberta/configuration_roberta.py/0 | {
"file_path": "AdaMix/src/transformers/models/roberta/configuration_roberta.py",
"repo_id": "AdaMix",
"token_count": 953
} | 62 |
# coding=utf-8
# Copyright 2021 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable... | AdaMix/src/transformers/models/speech_to_text/processing_speech_to_text.py/0 | {
"file_path": "AdaMix/src/transformers/models/speech_to_text/processing_speech_to_text.py",
"repo_id": "AdaMix",
"token_count": 2597
} | 63 |
# coding=utf-8
# Copyright 2020 Google Research and The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless re... | AdaMix/src/transformers/models/tapas/tokenization_tapas.py/0 | {
"file_path": "AdaMix/src/transformers/models/tapas/tokenization_tapas.py",
"repo_id": "AdaMix",
"token_count": 53002
} | 64 |
# coding=utf-8
# Copyright 2019-present, Facebook, Inc and the HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Un... | AdaMix/src/transformers/models/xlm/modeling_tf_xlm.py/0 | {
"file_path": "AdaMix/src/transformers/models/xlm/modeling_tf_xlm.py",
"repo_id": "AdaMix",
"token_count": 26560
} | 65 |
#!/usr/bin/env python
# coding=utf-8
# Copyright 2021 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LI... | AdaMix/src/transformers/utils/__init__.py/0 | {
"file_path": "AdaMix/src/transformers/utils/__init__.py",
"repo_id": "AdaMix",
"token_count": 540
} | 66 |
# THIS FILE HAS BEEN AUTOGENERATED. To update:
# 1. modify: models/auto/modeling_auto.py
# 2. run: python utils/class_mapping_update.py
from collections import OrderedDict
MODEL_FOR_QUESTION_ANSWERING_MAPPING_NAMES = OrderedDict(
[
("ConvBertConfig", "ConvBertForQuestionAnswering"),
("LEDConfig", ... | AdaMix/src/transformers/utils/modeling_auto_mapping.py/0 | {
"file_path": "AdaMix/src/transformers/utils/modeling_auto_mapping.py",
"repo_id": "AdaMix",
"token_count": 659
} | 67 |
## Copyright 2020 The HuggingFace Team. All rights reserved.
##
## Licensed under the Apache License, Version 2.0 (the "License");
## you may not use this file except in compliance with the License.
## You may obtain a copy of the License at
##
## http://www.apache.org/licenses/LICENSE-2.0
##
## Unless required by ... | AdaMix/templates/adding_a_new_model/cookiecutter-template-{{cookiecutter.modelname}}/to_replace_{{cookiecutter.lowercase_modelname}}.py/0 | {
"file_path": "AdaMix/templates/adding_a_new_model/cookiecutter-template-{{cookiecutter.modelname}}/to_replace_{{cookiecutter.lowercase_modelname}}.py",
"repo_id": "AdaMix",
"token_count": 6383
} | 68 |
# coding=utf-8
# Copyright 2021 HuggingFace Inc.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or ag... | AdaMix/tests/test_feature_extraction_speech_to_text.py/0 | {
"file_path": "AdaMix/tests/test_feature_extraction_speech_to_text.py",
"repo_id": "AdaMix",
"token_count": 2436
} | 69 |
# coding=utf-8
# Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless requir... | AdaMix/tests/test_modeling_bert.py/0 | {
"file_path": "AdaMix/tests/test_modeling_bert.py",
"repo_id": "AdaMix",
"token_count": 10939
} | 70 |
# Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicabl... | AdaMix/tests/test_modeling_flax_bert.py/0 | {
"file_path": "AdaMix/tests/test_modeling_flax_bert.py",
"repo_id": "AdaMix",
"token_count": 1942
} | 71 |
# Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicabl... | AdaMix/tests/test_modeling_mt5.py/0 | {
"file_path": "AdaMix/tests/test_modeling_mt5.py",
"repo_id": "AdaMix",
"token_count": 817
} | 72 |
# coding=utf-8
# Copyright 2021 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless r... | AdaMix/tests/test_modeling_tf_mbart.py/0 | {
"file_path": "AdaMix/tests/test_modeling_tf_mbart.py",
"repo_id": "AdaMix",
"token_count": 6424
} | 73 |
# coding=utf-8
# Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless requir... | AdaMix/tests/test_modeling_xlm.py/0 | {
"file_path": "AdaMix/tests/test_modeling_xlm.py",
"repo_id": "AdaMix",
"token_count": 8258
} | 74 |
# Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicabl... | AdaMix/tests/test_pipelines_table_question_answering.py/0 | {
"file_path": "AdaMix/tests/test_pipelines_table_question_answering.py",
"repo_id": "AdaMix",
"token_count": 5496
} | 75 |
# coding=utf-8
# Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless requir... | AdaMix/tests/test_tokenization_bert_japanese.py/0 | {
"file_path": "AdaMix/tests/test_tokenization_bert_japanese.py",
"repo_id": "AdaMix",
"token_count": 5199
} | 76 |
# Copyright 2021 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicabl... | AdaMix/tests/test_tokenization_m2m_100.py/0 | {
"file_path": "AdaMix/tests/test_tokenization_m2m_100.py",
"repo_id": "AdaMix",
"token_count": 3428
} | 77 |
# coding=utf-8
# Copyright 2020 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable... | AdaMix/utils/check_copies.py/0 | {
"file_path": "AdaMix/utils/check_copies.py",
"repo_id": "AdaMix",
"token_count": 5181
} | 78 |
from __future__ import absolute_import, division, print_function, unicode_literals
import numpy as np
import os
import sys
import airsimdroneracingvae
# imports
curr_dir = os.path.dirname(os.path.abspath(__file__))
import_path = os.path.join(curr_dir, '..')
sys.path.insert(0, import_path)
import racing_models
import ... | AirSim-Drone-Racing-VAE-Imitation/imitation_learning/vel_regressor.py/0 | {
"file_path": "AirSim-Drone-Racing-VAE-Imitation/imitation_learning/vel_regressor.py",
"repo_id": "AirSim-Drone-Racing-VAE-Imitation",
"token_count": 1119
} | 79 |
from scipy.interpolate import CubicSpline, CubicHermiteSpline
import airsimneurips as airsim
import cvxpy as cp
import numpy as np
import time
gate_dimensions = [1.6, 1.6]
gate_facing_vector = airsim.Vector3r(x_val=0, y_val=1, z_val=0)
def rotate_vector(q, v):
v_quat = v.to_Quaternionr()
v_rotated_ = q * v_qu... | AirSim-NeurIPS2019-Drone-Racing/baselines/gtp.py/0 | {
"file_path": "AirSim-NeurIPS2019-Drone-Racing/baselines/gtp.py",
"repo_id": "AirSim-NeurIPS2019-Drone-Racing",
"token_count": 7424
} | 80 |
[settings]
include_trailing_comma=True
force_grid_wrap=0
use_parentheses=True
line_length=79
profile=black
; 3 stands for Vertical Hanging Indent, e.g.
; from third_party import (
; lib1,
; lib2,
; lib3,
; )
; docs: https://github.com/timothycrosley/isort#multi-line-output-modes
multi_line_output=3
skip=ta... | ApplicationInsights-Python/.isort.cfg/0 | {
"file_path": "ApplicationInsights-Python/.isort.cfg",
"repo_id": "ApplicationInsights-Python",
"token_count": 214
} | 81 |
# Azure Trusted Research Environment
**Azure TRE documentation site**: <https://microsoft.github.io/AzureTRE/>
## Background
<img align="right" src="./docs/assets/azure-tre-logo.svg" width="33%" />
Across the health industry, be it a pharmaceutical company interrogating clinical trial results, or a public health pro... | AzureTRE/README.md/0 | {
"file_path": "AzureTRE/README.md",
"repo_id": "AzureTRE",
"token_count": 1468
} | 82 |
class NoFilesInRequestException(Exception):
pass
class TooManyFilesInRequestException(Exception):
pass
| AzureTRE/airlock_processor/exceptions/__init__.py/0 | {
"file_path": "AzureTRE/airlock_processor/exceptions/__init__.py",
"repo_id": "AzureTRE",
"token_count": 32
} | 83 |
import asyncio
from fastapi import APIRouter, Request
from core import credentials
from models.schemas.status import HealthCheck, ServiceStatus, StatusEnum
from resources import strings
from services.health_checker import create_resource_processor_status, create_state_store_status, create_service_bus_status
from servic... | AzureTRE/api_app/api/routes/health.py/0 | {
"file_path": "AzureTRE/api_app/api/routes/health.py",
"repo_id": "AzureTRE",
"token_count": 622
} | 84 |
class EntityDoesNotExist(Exception):
"""Raised when entity was not found in database."""
class DuplicateEntity(Exception):
"""Raised when we have an unexpected duplicate (ex. two currents)"""
class EntityVersionExist(Exception):
"""Raised when entity was not found in database."""
class UnableToAccessD... | AzureTRE/api_app/db/errors.py/0 | {
"file_path": "AzureTRE/api_app/db/errors.py",
"repo_id": "AzureTRE",
"token_count": 297
} | 85 |
import uuid
from typing import List, Tuple
from pydantic import parse_obj_as
from db.repositories.resources_history import ResourceHistoryRepository
from models.domain.resource_template import ResourceTemplate
from models.domain.authentication import User
from core import config
from db.errors import EntityDoesNotExi... | AzureTRE/api_app/db/repositories/workspaces.py/0 | {
"file_path": "AzureTRE/api_app/db/repositories/workspaces.py",
"repo_id": "AzureTRE",
"token_count": 3198
} | 86 |
from enum import Enum
from typing import Optional, Union, List
from pydantic import BaseModel, Field, validator
from models.domain.azuretremodel import AzureTREModel
from models.domain.request_action import RequestAction
from resources import strings
class ResourceType(str, Enum):
"""
Type of resource to depl... | AzureTRE/api_app/models/domain/resource.py/0 | {
"file_path": "AzureTRE/api_app/models/domain/resource.py",
"repo_id": "AzureTRE",
"token_count": 1208
} | 87 |
from typing import List, Optional
from pydantic import BaseModel, Field, Extra
from models.domain.resource import ResourceHistoryItem
class ResourcePatch(BaseModel):
isEnabled: Optional[bool]
properties: Optional[dict]
templateVersion: Optional[str]
class Config:
extra = Extra.forbid
... | AzureTRE/api_app/models/schemas/resource.py/0 | {
"file_path": "AzureTRE/api_app/models/schemas/resource.py",
"repo_id": "AzureTRE",
"token_count": 796
} | 88 |
PONG = "pong"
# API Descriptions
API_GET_HEALTH_STATUS = "Get health status"
API_GET_PING = "Simple endpoint to test calling the API"
API_GET_METADATA = "Get public API metadata (e.g. to support the UI and CLI)"
API_MIGRATE_DATABASE = "Migrate documents in the database"
API_GET_MY_OPERATIONS = "Get Operations that th... | AzureTRE/api_app/resources/strings.py/0 | {
"file_path": "AzureTRE/api_app/resources/strings.py",
"repo_id": "AzureTRE",
"token_count": 4629
} | 89 |
from datetime import datetime, timedelta
from services.logging import logger
from azure.storage.blob import generate_container_sas, ContainerSasPermissions, BlobServiceClient
from fastapi import HTTPException, status
from core import config, credentials
from models.domain.airlock_request import AirlockRequest, Airlock... | AzureTRE/api_app/services/airlock.py/0 | {
"file_path": "AzureTRE/api_app/services/airlock.py",
"repo_id": "AzureTRE",
"token_count": 10431
} | 90 |
import pytest
from httpx import AsyncClient
from starlette.status import HTTP_404_NOT_FOUND
pytestmark = pytest.mark.asyncio
async def test_frw_validation_error_format(app):
async with AsyncClient(base_url="http://testserver", app=app) as client:
response = await client.get("/wrong_path/asd")
asser... | AzureTRE/api_app/tests_ma/test_api/test_errors/test_error.py/0 | {
"file_path": "AzureTRE/api_app/tests_ma/test_api/test_errors/test_error.py",
"repo_id": "AzureTRE",
"token_count": 142
} | 91 |
### Get all workspaces (Workspace Owner or Researcher -- Get own Workspaces)
GET {{baseUrl}}/workspaces
Accept: {{contentType}}
Authorization: Bearer {{token}}
### Get workspace (Workspace Owner or Researcher -- Get own Workspace)
GET {{baseUrl}}/workspaces/{{workspaceId}}
Accept: {{contentType}}
Authorization: Bearer... | AzureTRE/api_http_requests/API Resource GET Endpoints.http/0 | {
"file_path": "AzureTRE/api_http_requests/API Resource GET Endpoints.http",
"repo_id": "AzureTRE",
"token_count": 355
} | 92 |
import asyncio
from logging import Logger
import msal
from azure.identity.aio import ClientSecretCredential
from azure.cli.core import cloud
from urllib.parse import urlparse
from msal.authority import AuthorityBuilder
def get_auth_token_client_credentials(
log: Logger,
client_id: str,
client_secret: str,... | AzureTRE/cli/tre/authentication.py/0 | {
"file_path": "AzureTRE/cli/tre/authentication.py",
"repo_id": "AzureTRE",
"token_count": 570
} | 93 |
import logging
import click
from tre.commands.operation import operations_list
from tre.output import output_option, query_option
from .contexts import SharedServiceContext, pass_shared_service_context
@click.group(name="operations", help="List operations ")
def shared_service_operations():
pass
@click.command... | AzureTRE/cli/tre/commands/shared_services/operations.py/0 | {
"file_path": "AzureTRE/cli/tre/commands/shared_services/operations.py",
"repo_id": "AzureTRE",
"token_count": 287
} | 94 |
import json
import logging
import click
from tre.api_client import ApiClient
from tre.commands.operation import default_operation_table_query_single, operation_show
from tre.output import output, output_option, query_option
from .contexts import UserResourceContext, pass_user_resource_context
from .operation import us... | AzureTRE/cli/tre/commands/workspaces/workspace_services/user_resources/user_resource.py/0 | {
"file_path": "AzureTRE/cli/tre/commands/workspaces/workspace_services/user_resources/user_resource.py",
"repo_id": "AzureTRE",
"token_count": 4962
} | 95 |
# Utilize the existing service bus - add new queue
resource "azurerm_servicebus_queue" "step_result" {
name = local.step_result_queue_name
namespace_id = var.airlock_servicebus.id
enable_partitioning = false
}
resource "azurerm_servicebus_queue" "status_changed" {
name = local.status_changed_q... | AzureTRE/core/terraform/airlock/service_bus.tf/0 | {
"file_path": "AzureTRE/core/terraform/airlock/service_bus.tf",
"repo_id": "AzureTRE",
"token_count": 447
} | 96 |
output "app_insights_connection_string" {
value = azurerm_application_insights.core.connection_string
}
output "log_analytics_workspace_id" {
value = azurerm_log_analytics_workspace.core.id
}
output "log_analytics_workspace_name" {
value = azurerm_log_analytics_workspace.core.name
}
| AzureTRE/core/terraform/azure-monitor/outputs.tf/0 | {
"file_path": "AzureTRE/core/terraform/azure-monitor/outputs.tf",
"repo_id": "AzureTRE",
"token_count": 105
} | 97 |
# admin jumpbox
moved {
from = module.jumpbox.azurerm_network_interface.jumpbox_nic
to = azurerm_network_interface.jumpbox_nic
}
moved {
from = module.jumpbox.random_string.username
to = random_string.username
}
moved {
from = module.jumpbox.random_password.password
to = random_password.password
}
... | AzureTRE/core/terraform/modules_move_definitions.tf/0 | {
"file_path": "AzureTRE/core/terraform/modules_move_definitions.tf",
"repo_id": "AzureTRE",
"token_count": 3477
} | 98 |
#!/bin/bash
| AzureTRE/core/terraform/scripts/cleanup-hook.sh/0 | {
"file_path": "AzureTRE/core/terraform/scripts/cleanup-hook.sh",
"repo_id": "AzureTRE",
"token_count": 6
} | 99 |
#!/bin/bash
# This script is designed to be `source`d to create reusable helper functions
# Utility function that retrieves all of the 'requiredResourceAccess' from an application,
# it then removes any access for a given `resourceAppId`, merges in a new element into the
# array and then posts it back to AAD.
functio... | AzureTRE/devops/scripts/aad/update_resource_access.sh/0 | {
"file_path": "AzureTRE/devops/scripts/aad/update_resource_access.sh",
"repo_id": "AzureTRE",
"token_count": 483
} | 100 |
#!/bin/bash
set -o errexit
set -o pipefail
set -o nounset
# set -o xtrace
#
# Usage:
# env_to_yaml_config.sh <.env file>
#
cp config.sample.yaml config.yaml
# Loop over the relevant lines in the file specified in $1 (passed in after the loop)
# The loop source filters the lines in the source file to those that shou... | AzureTRE/devops/scripts/env_to_yaml_config.sh/0 | {
"file_path": "AzureTRE/devops/scripts/env_to_yaml_config.sh",
"repo_id": "AzureTRE",
"token_count": 687
} | 101 |
#!/bin/bash
set -o errexit
set -o pipefail
set -o nounset
# Uncomment this line to see each command for debugging (careful: this will show secrets!)
# set -o xtrace
if [[ -z ${STORAGE_ACCOUNT:-} ]]; then
echo "STORAGE_ACCOUNT not set"
exit 1
fi
# The storage account is protected by network rules
echo "Enabling pu... | AzureTRE/devops/scripts/upload_static_web.sh/0 | {
"file_path": "AzureTRE/devops/scripts/upload_static_web.sh",
"repo_id": "AzureTRE",
"token_count": 286
} | 102 |
# TRE Automation Admin Application
## Name
The Automation Application is typically called `<TRE_ID> Automation Admin` within the Microsoft Entra ID Portal.
## Purpose
This application is used to authorize end-to-end test scenarios.
!!! note
- This app registration is only needed and used for **testing**
## Ap... | AzureTRE/docs/tre-admins/identities/test-account.md/0 | {
"file_path": "AzureTRE/docs/tre-admins/identities/test-account.md",
"repo_id": "AzureTRE",
"token_count": 1193
} | 103 |
# Installing workspace service and user resource
## Publish and register a workspace service template
We will use the [Guacamole workspace service bundle](../../tre-templates/workspace-services/guacamole.md) for the purposes of this tutorial; a template that provides Virtual Desktop functionality allowing the deploym... | AzureTRE/docs/tre-admins/setup-instructions/ui-install-ws-and-ur.md/0 | {
"file_path": "AzureTRE/docs/tre-admins/setup-instructions/ui-install-ws-and-ur.md",
"repo_id": "AzureTRE",
"token_count": 710
} | 104 |
# Troubleshooting cloud-init
Cloud-init is used to configure a number of virtual machines within the Azure TRE project at first boot. This methood is used as we are unable to distribute pre built images with third part dependancies. In a production environment you may choose to create your own VM images to avoid the n... | AzureTRE/docs/troubleshooting-faq/cloud-init.md/0 | {
"file_path": "AzureTRE/docs/troubleshooting-faq/cloud-init.md",
"repo_id": "AzureTRE",
"token_count": 254
} | 105 |
import asyncio
import json
import base64
import logging
from urllib.parse import urlparse
from resources.helpers import get_installation_id
from shared.logging import logger, shell_output_logger
def azure_login_command(config):
set_cloud_command = f"az cloud set --name {config['azure_environment']} >/dev/null "
... | AzureTRE/resource_processor/resources/commands.py/0 | {
"file_path": "AzureTRE/resource_processor/resources/commands.py",
"repo_id": "AzureTRE",
"token_count": 2746
} | 106 |
data "azurerm_subnet" "shared" {
resource_group_name = local.core_resource_group_name
virtual_network_name = local.core_vnet
name = "SharedSubnet"
}
data "azurerm_key_vault" "keyvault" {
name = local.keyvault_name
resource_group_name = local.core_resource_group_name
}
data "az... | AzureTRE/templates/shared_services/admin-vm/terraform/data.tf/0 | {
"file_path": "AzureTRE/templates/shared_services/admin-vm/terraform/data.tf",
"repo_id": "AzureTRE",
"token_count": 168
} | 107 |
# This file is maintained automatically by "terraform init".
# Manual edits may be lost in future updates.
provider "registry.terraform.io/hashicorp/azurerm" {
version = "3.57.0"
constraints = "3.57.0"
hashes = [
"h1:SOBKU/ioGnpuQpAx6dgaD0EzfAM2W+uS9e6p59viSxs=",
"zh:028202b0ae01f1262dac076b383cb68b5... | AzureTRE/templates/shared_services/airlock_notifier/terraform/.terraform.lock.hcl/0 | {
"file_path": "AzureTRE/templates/shared_services/airlock_notifier/terraform/.terraform.lock.hcl",
"repo_id": "AzureTRE",
"token_count": 1351
} | 108 |
#!/bin/bash
| AzureTRE/templates/shared_services/certs/scripts/cleanup-hook.sh/0 | {
"file_path": "AzureTRE/templates/shared_services/certs/scripts/cleanup-hook.sh",
"repo_id": "AzureTRE",
"token_count": 6
} | 109 |
{
"$schema": "http://json-schema.org/draft-07/schema",
"$id": "https://github.com/microsoft/AzureTRE/templates/workspace_services/guacamole/user_resources/guacamole-azure-linuxvm/template_schema.json",
"type": "object",
"title": "Azure CycleCloud",
"description": "Azure CycleCloud is an enterprise-friendly to... | AzureTRE/templates/shared_services/cyclecloud/template_schema.json/0 | {
"file_path": "AzureTRE/templates/shared_services/cyclecloud/template_schema.json",
"repo_id": "AzureTRE",
"token_count": 150
} | 110 |
data "azurerm_resource_group" "rg" {
name = local.core_resource_group_name
}
data "azurerm_virtual_network" "core" {
name = local.core_virtual_network_name
resource_group_name = data.azurerm_resource_group.rg.name
}
data "azurerm_subnet" "services" {
name = "SharedSubnet"
virt... | AzureTRE/templates/shared_services/databricks-auth/terraform/data.tf/0 | {
"file_path": "AzureTRE/templates/shared_services/databricks-auth/terraform/data.tf",
"repo_id": "AzureTRE",
"token_count": 276
} | 111 |
resource "azurerm_public_ip" "fwtransit" {
name = "pip-fw-${var.tre_id}"
resource_group_name = local.core_resource_group_name
location = data.azurerm_resource_group.rg.location
allocation_method = "Static"
sku = "Standard"
tags = local.tre_shared_se... | AzureTRE/templates/shared_services/firewall/terraform/firewall.tf/0 | {
"file_path": "AzureTRE/templates/shared_services/firewall/terraform/firewall.tf",
"repo_id": "AzureTRE",
"token_count": 1314
} | 112 |
# This file is maintained automatically by "terraform init".
# Manual edits may be lost in future updates.
provider "registry.terraform.io/hashicorp/azurerm" {
version = "3.33.0"
constraints = "3.33.0"
hashes = [
"h1:pXB6SKE4NKdf+LepsQjrLcBnVTL5ejeKvx/kyojai6c=",
"zh:136d9c642746d8d84e62ecd8ab0c7dc01... | AzureTRE/templates/shared_services/gitea/terraform/.terraform.lock.hcl/0 | {
"file_path": "AzureTRE/templates/shared_services/gitea/terraform/.terraform.lock.hcl",
"repo_id": "AzureTRE",
"token_count": 2045
} | 113 |
#!/bin/bash
# Configure Nexus to use certificate to serve proxies over https
set -o errexit
set -o pipefail
set -o nounset
# set -o xtrace
echo "Setting up Nexus SSL..."
# Import ssl cert to keystore within Nexus volume
keystore_timeout=60
echo 'Checking for nexus-data/keystores directory...'
while [ ! -d /etc/nexu... | AzureTRE/templates/shared_services/sonatype-nexus-vm/scripts/configure_nexus_ssl.sh/0 | {
"file_path": "AzureTRE/templates/shared_services/sonatype-nexus-vm/scripts/configure_nexus_ssl.sh",
"repo_id": "AzureTRE",
"token_count": 1156
} | 114 |
{
"schemaType": "ParameterSet",
"schemaVersion": "1.0.1",
"namespace": "",
"name": "tre-service-azureml",
"parameters": [
{
"name": "workspace_id",
"source": {
"env": "WORKSPACE_ID"
}
},
{
"name": "id",
"source": {
"env": "ID"
}
},
{
... | AzureTRE/templates/workspace_services/azureml/parameters.json/0 | {
"file_path": "AzureTRE/templates/workspace_services/azureml/parameters.json",
"repo_id": "AzureTRE",
"token_count": 738
} | 115 |
variable "workspace_id" {
type = string
}
variable "tre_id" {
type = string
}
variable "tre_resource_id" {
type = string
}
variable "display_name" {
type = string
}
variable "description" {
type = string
}
variable "is_exposed_externally" {
type = bool
}
variable "address_space" {
type = string
}
variable... | AzureTRE/templates/workspace_services/azureml/terraform/variables.tf/0 | {
"file_path": "AzureTRE/templates/workspace_services/azureml/terraform/variables.tf",
"repo_id": "AzureTRE",
"token_count": 304
} | 116 |
# syntax=docker/dockerfile-upstream:1.4.0
FROM --platform=linux/amd64 debian:bullseye-slim
# PORTER_INIT
RUN rm -f /etc/apt/apt.conf.d/docker-clean; echo 'Binary::apt::APT::Keep-Downloaded-Packages "true";' > /etc/apt/apt.conf.d/keep-cache
# Install git - required for https://registry.terraform.io/modules/claranet/r... | AzureTRE/templates/workspace_services/databricks/Dockerfile.tmpl/0 | {
"file_path": "AzureTRE/templates/workspace_services/databricks/Dockerfile.tmpl",
"repo_id": "AzureTRE",
"token_count": 233
} | 117 |
ID="__CHANGE_ME__"
WORKSPACE_ID="__CHANGE_ME__"
MGMT_ACR_NAME="__CHANGE_ME__"
| AzureTRE/templates/workspace_services/gitea/.env.sample/0 | {
"file_path": "AzureTRE/templates/workspace_services/gitea/.env.sample",
"repo_id": "AzureTRE",
"token_count": 40
} | 118 |
resource "random_password" "password" {
length = 20
min_upper = 2
min_lower = 2
min_numeric = 2
min_special = 2
}
resource "azurerm_mysql_flexible_server" "gitea" {
name = "mysql-${local.service_resource_name_suffix}"
resource_group_name = data.azurerm_resource_g... | AzureTRE/templates/workspace_services/gitea/terraform/mysql.tf/0 | {
"file_path": "AzureTRE/templates/workspace_services/gitea/terraform/mysql.tf",
"repo_id": "AzureTRE",
"token_count": 1166
} | 119 |
#!/usr/bin/with-contenv sh
set -x
echo >&2 "starting oauth2-proxy"
cookiesecret=$(dd if=/dev/urandom bs=32 count=1 2>/dev/null | base64 | tr -d -- '\n' | tr -- '+/' '-_'; echo)
"${OAUTH2_PROXY_HOME}"/oauth2-proxy \
--provider oidc \
--skip-provider-button \
--cookie-secret "${cookiesecret}" \
--oidc-issuer-url "${OAU... | AzureTRE/templates/workspace_services/guacamole/guacamole-server/docker/services/oauth/run/0 | {
"file_path": "AzureTRE/templates/workspace_services/guacamole/guacamole-server/docker/services/oauth/run",
"repo_id": "AzureTRE",
"token_count": 405
} | 120 |
/*
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you ... | AzureTRE/templates/workspace_services/guacamole/guacamole-server/guacamole-auth-azure/src/main/java/org/apache/guacamole/auth/azuretre/user/AzureTREAuthenticatedUser.java/0 | {
"file_path": "AzureTRE/templates/workspace_services/guacamole/guacamole-server/guacamole-auth-azure/src/main/java/org/apache/guacamole/auth/azuretre/user/AzureTREAuthenticatedUser.java",
"repo_id": "AzureTRE",
"token_count": 727
} | 121 |
{
"$schema": "http://json-schema.org/draft-07/schema",
"$id": "https://github.com/microsoft/AzureTRE/templates/workspace_services/guacamole/user_resources/guacamole-azure-export-reviewvm/template_schema.json",
"type": "object",
"title": "Export review Virtual Machine",
"description": "Windows virtua... | AzureTRE/templates/workspace_services/guacamole/user_resources/guacamole-azure-export-reviewvm/template_schema.json/0 | {
"file_path": "AzureTRE/templates/workspace_services/guacamole/user_resources/guacamole-azure-export-reviewvm/template_schema.json",
"repo_id": "AzureTRE",
"token_count": 568
} | 122 |
#!/bin/bash
set -o errexit
set -o pipefail
# set -o nounset
# Uncomment this line to see each command for debugging (careful: this will show secrets!)
# set -o xtrace
# Remove apt sources not included in sources.list file
sudo rm -f /etc/apt/sources.list.d/*
# Update apt packages from configured Nexus sources
sudo a... | AzureTRE/templates/workspace_services/guacamole/user_resources/guacamole-azure-linuxvm/terraform/vm_config.sh/0 | {
"file_path": "AzureTRE/templates/workspace_services/guacamole/user_resources/guacamole-azure-linuxvm/terraform/vm_config.sh",
"repo_id": "AzureTRE",
"token_count": 1262
} | 123 |
Remove-Item -LiteralPath "C:\AzureData" -Force -Recurse
$ErrorActionPreference = "Stop"
if( ${SharedStorageAccess} -eq 1 )
{
$Command = "net use z: \\${StorageAccountFileHost}\${FileShareName} /u:AZURE\${StorageAccountName} ${StorageAccountKey}"
$Command | Out-File "C:\ProgramData\Start Menu\Programs\StartUp\atta... | AzureTRE/templates/workspace_services/guacamole/user_resources/guacamole-azure-windowsvm/terraform/vm_config.ps1/0 | {
"file_path": "AzureTRE/templates/workspace_services/guacamole/user_resources/guacamole-azure-windowsvm/terraform/vm_config.ps1",
"repo_id": "AzureTRE",
"token_count": 877
} | 124 |
{
"$schema": "https://schema.management.azure.com/schemas/2019-04-01/deploymentTemplate.json#",
"contentVersion": "1.0.0.0",
"parameters": {
"vnet_name": {
"type": "String"
},
"location": {
"type": "String",
"metadata": {
"descripti... | AzureTRE/templates/workspace_services/innereye/terraform/nopipcompute/deploypl_compute_cluster.json/0 | {
"file_path": "AzureTRE/templates/workspace_services/innereye/terraform/nopipcompute/deploypl_compute_cluster.json",
"repo_id": "AzureTRE",
"token_count": 1562
} | 125 |
{
"$schema": "http://json-schema.org/draft-07/schema",
"$id": "https://github.com/microsoft/AzureTRE/templates/workspace_services/mlflow/template_schema.json",
"type": "object",
"title": "MLflow",
"description": "MLflow server to manage machine learning lifecycle.",
"required": [],
"properties": {
"di... | AzureTRE/templates/workspace_services/mlflow/template_schema.json/0 | {
"file_path": "AzureTRE/templates/workspace_services/mlflow/template_schema.json",
"repo_id": "AzureTRE",
"token_count": 595
} | 126 |
{
"$schema": "http://json-schema.org/draft-07/schema",
"$id": "https://github.com/microsoft/AzureTRE/templates/workspace_services/sql/template_schema.json",
"type": "object",
"title": "MySQL Workspace Service",
"description": "Provides MySQL within the workspace",
"required": [],
"properties": {
"sql_... | AzureTRE/templates/workspace_services/mysql/template_schema.json/0 | {
"file_path": "AzureTRE/templates/workspace_services/mysql/template_schema.json",
"repo_id": "AzureTRE",
"token_count": 465
} | 127 |
#!/bin/bash
set -o errexit
set -o pipefail
set -o nounset
link_name="core"
result=$(az network private-dns link vnet list --resource-group "${RESOURCE_GROUP}" -z "${DNS_ZONE_NAME}" --query "[?name=='${link_name}'] | length(@)")
if [[ "${result}" == 0 ]];
then
az network private-dns link vnet create \
--name $... | AzureTRE/templates/workspace_services/ohdsi/scripts/postgres_dns_link.sh/0 | {
"file_path": "AzureTRE/templates/workspace_services/ohdsi/scripts/postgres_dns_link.sh",
"repo_id": "AzureTRE",
"token_count": 186
} | 128 |
variable "location" {
type = string
}
variable "tre_id" {
type = string
}
variable "ws_resource_group_name" {
type = string
}
variable "enable_local_debugging" {
type = bool
}
variable "services_subnet_id" {
type = string
}
variable "airlock_processor_subnet_id" {
type = string
}
variable "short_workspace_i... | AzureTRE/templates/workspaces/base/terraform/airlock/variables.tf/0 | {
"file_path": "AzureTRE/templates/workspaces/base/terraform/airlock/variables.tf",
"repo_id": "AzureTRE",
"token_count": 157
} | 129 |
output "vnet_id" {
value = azurerm_virtual_network.ws.id
}
output "services_subnet_id" {
value = azurerm_subnet.services.id
}
output "vaultcore_zone_id" {
value = data.azurerm_private_dns_zone.vaultcore.id
}
output "filecore_zone_id" {
value = data.azurerm_private_dns_zone.filecore.id
}
output "blobcore_zon... | AzureTRE/templates/workspaces/base/terraform/network/outputs.tf/0 | {
"file_path": "AzureTRE/templates/workspaces/base/terraform/network/outputs.tf",
"repo_id": "AzureTRE",
"token_count": 423
} | 130 |
import React, { useContext } from 'react';
import { Nav, INavLinkGroup } from '@fluentui/react/lib/Nav';
import { useNavigate } from 'react-router-dom';
import { AppRolesContext } from '../../contexts/AppRolesContext';
import { RoleName } from '../../models/roleNames';
export const LeftNav: React.FunctionComponent = (... | AzureTRE/ui/app/src/components/root/LeftNav.tsx/0 | {
"file_path": "AzureTRE/ui/app/src/components/root/LeftNav.tsx",
"repo_id": "AzureTRE",
"token_count": 461
} | 131 |
import React, { } from 'react';
import { IStackStyles, IStackTokens, Stack, Text } from '@fluentui/react';
import { ResourceCard } from '../shared/ResourceCard';
import { Resource } from '../../models/resource';
interface ResourceCardListProps {
resources: Array<Resource>,
selectResource?: (resource: Resource) =... | AzureTRE/ui/app/src/components/shared/ResourceCardList.tsx/0 | {
"file_path": "AzureTRE/ui/app/src/components/shared/ResourceCardList.tsx",
"repo_id": "AzureTRE",
"token_count": 855
} | 132 |
import React, { useCallback, useContext, useEffect, useState } from 'react';
import { ColumnActionsMode, CommandBar, CommandBarButton, ContextualMenu, DirectionalHint, getTheme, IColumn, ICommandBarItemProps, Icon, IContextualMenuItem, IContextualMenuProps, Persona, PersonaSize, SelectionMode, ShimmeredDetailsList, Sta... | AzureTRE/ui/app/src/components/shared/airlock/Airlock.tsx/0 | {
"file_path": "AzureTRE/ui/app/src/components/shared/airlock/Airlock.tsx",
"repo_id": "AzureTRE",
"token_count": 5547
} | 133 |
import { getTheme, Icon, mergeStyles, Stack } from '@fluentui/react';
import React, { useContext } from 'react';
import { WorkspaceContext } from '../../contexts/WorkspaceContext';
export const WorkspaceHeader: React.FunctionComponent = () => {
const workspaceCtx = useContext(WorkspaceContext);
return (
<>
... | AzureTRE/ui/app/src/components/workspaces/WorkspaceHeader.tsx/0 | {
"file_path": "AzureTRE/ui/app/src/components/workspaces/WorkspaceHeader.tsx",
"repo_id": "AzureTRE",
"token_count": 371
} | 134 |
export enum ApiEndpoint {
Workspaces = 'workspaces',
WorkspaceServices = 'workspace-services',
UserResources = 'user-resources',
SharedServices = 'shared-services',
AirlockRequests = 'requests',
AirlockLink = 'link',
AirlockSubmit = 'submit',
AirlockCancel = 'cancel',
AirlockReview =... | AzureTRE/ui/app/src/models/apiEndpoints.ts/0 | {
"file_path": "AzureTRE/ui/app/src/models/apiEndpoints.ts",
"repo_id": "AzureTRE",
"token_count": 265
} | 135 |
import { ReportHandler } from 'web-vitals';
const reportWebVitals = (onPerfEntry?: ReportHandler) => {
if (onPerfEntry && onPerfEntry instanceof Function) {
import('web-vitals').then(({ getCLS, getFID, getFCP, getLCP, getTTFB }) => {
getCLS(onPerfEntry);
getFID(onPerfEntry);
getFCP(onPerfEntry)... | AzureTRE/ui/app/src/reportWebVitals.ts/0 | {
"file_path": "AzureTRE/ui/app/src/reportWebVitals.ts",
"repo_id": "AzureTRE",
"token_count": 182
} | 136 |
# Support
Welcome to the BitBLAS support page! BitBLAS is a cutting-edge framework designed for generating high-performance CUDA/HIP code for BLAS operators. Whether you're working on projects like BitNet, GPTQ, or similar, BitBLAS is here to accelerate your development with its robust features.
## How to File Issues... | BitBLAS/SUPPORT.md/0 | {
"file_path": "BitBLAS/SUPPORT.md",
"repo_id": "BitBLAS",
"token_count": 473
} | 137 |
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