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# Licensed under a 3-clause BSD style license - see LICENSE.rst # -*- coding: utf-8 -*- """ =================== prospect.viewer.cds =================== Class containing all bokeh's ColumnDataSource objects needed in viewer.py """ import numpy as np from pkg_resources import resource_filename import bokeh.plotting a...
[ "numpy.median", "numpy.sqrt", "numpy.log10", "numpy.where", "numpy.any", "numpy.zeros", "bokeh.models.ColumnDataSource", "numpy.isnan", "numpy.all" ]
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import logging import time import numpy as np from eda import ma_data, tx_data from sir_fitting_us import seir_experiment, make_csv_from_tx_traj logger = logging.getLogger(__name__) logger.setLevel(logging.INFO) logger.info("Fitting model.") # initial values taken from previous fit, used to seed MH sampler efficie...
[ "logging.getLogger", "numpy.mean", "time.ctime", "sir_fitting_us.make_csv_from_tx_traj", "numpy.array", "sir_fitting_us.seir_experiment" ]
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""" @file @brief Test for :epkg:`cartopy`. """ import numpy import numba @numba.jit(nopython=True, parallel=True) def logistic_regression(Y, X, w, iterations): "Fits a logistic regression." for _ in range(iterations): w -= numpy.dot(((1.0 / (1.0 + numpy.exp(-Y * numpy.dot(X, w))) - 1.0) * Y), X) r...
[ "numpy.dot", "numba.jit", "numpy.random.rand" ]
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import numpy as np from plots import plots_for_predictions as pp from utilss import distinct_colours as dc import matplotlib.pyplot as plt c = dc.get_distinct(4) path = '/Users/luisals/Documents/deep_halos_files/mass_range_13.4/random_20sims_200k/lr5e-5/' p1 = np.load(path + "seed_20/predicted_sim_6_epoch_09.npy") t1...
[ "plots.plots_for_predictions.plot_histogram_predictions", "numpy.load", "matplotlib.pyplot.savefig", "utilss.distinct_colours.get_distinct" ]
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""" ---OK--- """ from collections import OrderedDict import copy import numpy as np from crystalpy.examples.Values import Interval class PlotData1D(object): """ Represents a 1D plot. The graph data together with related information. """ def __init__(self, title, title_x_axis, title_y_axis): ...
[ "collections.OrderedDict", "numpy.unwrap", "numpy.asarray", "numpy.deg2rad", "copy.deepcopy", "crystalpy.examples.Values.Interval", "numpy.rad2deg" ]
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from hytra.pluginsystem import transition_feature_vector_construction_plugin import numpy as np from compiler.ast import flatten class TransitionFeaturesSubtraction( transition_feature_vector_construction_plugin.TransitionFeatureVectorConstructionPlugin ): """ Computes the subtraction of features in the f...
[ "numpy.array" ]
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# -*- coding: utf-8 -*- # Copyright (c) 2021. Distributed under the terms of the MIT License. from phonopy.interface.calculator import read_crystal_structure from phonopy.structure.atoms import PhonopyAtoms from vise.util.phonopy.phonopy_input import structure_to_phonopy_atoms import numpy as np def assert_same_phon...
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import numpy as np import math import logging from termcolor import colored # Check a matrix for: negative eigenvalues, asymmetry and negative diagonal values def positive_definite(M,epsilon = 0.000001,verbose=False): # Symmetrization Mt = np.transpose(M) M = (M + Mt)/2 eigenvalues = np.linalg.eigvals(...
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import warnings from typing import Callable, List, Optional, Union import mpmath import numpy as np import paramak import sympy as sp from paramak import RotateMixedShape, diff_between_angles from paramak.parametric_components.tokamak_plasma_plasmaboundaries import \ PlasmaBoundaries from scipy.interpolate import...
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import torch import torch.nn.functional as F from torch.autograd import Variable import numpy as np import os import math from utils import logger use_cuda = torch.cuda.is_available() # utility def to_var(x, dtype=None): if type(x) is np.ndarray: x = torch.from_numpy(x) elif type(x) is list: ...
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""" Explore raw composites based on indices from predicted testing data and showing all the difference OHC levels for OBSERVATIONS Author : <NAME> Date : 21 September 2021 Version : 2 (mostly for testing) """ ### Import packages import sys import matplotlib.pyplot as plt import numpy as np import calc_Ut...
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import torch import numpy as np import torch.nn.functional as F from torch.nn.utils.clip_grad import clip_grad_norm_ from mpi_utils.mpi_utils import sync_grads def update_entropy(alpha, log_alpha, target_entropy, log_pi, alpha_optim, cfg): if cfg.automatic_entropy_tuning: alpha_loss = -(log_alpha * (log_p...
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##--------------------------------Main file------------------------------------ ## ## Copyright (C) 2020 by <NAME> (<EMAIL>) ## June, 2020 ## <EMAIL> ##----------------------------------------------------------------------------- # Variables aleatorias múltiples # Se consideran dos bases de datos las ...
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# -*- coding:UTF-8 -*- import pandas as pd from minepy import MINE import seaborn as sns import matplotlib.pyplot as plt from sklearn.ensemble import ExtraTreesClassifier import xgboost as xgb import operator from sklearn.utils import shuffle from Common.ModelCommon import ModelCV from sklearn import svm import numpy a...
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import mss import numpy as np from PIL import Image from config import BOARD_HEIGHT, BOARD_WIDTH CELL_SIZE = 22 BOARD_X = 14 BOARD_Y = 111 COLOR_CODES = { (0, 0, 255): 1, (0, 123, 0): 2, (255, 0, 0): 3, (0, 0, 123): 4, (123, 0, 0): 5, (0, 123, 123): 6, (0, 0, 0): 7, (123, 123, 123): 8, (189, 189, 189): 0 #uno...
[ "numpy.insert", "numpy.reshape", "mss.mss", "numpy.full", "PIL.Image.frombytes" ]
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import numpy N,M,P = map(int,input().split()) p_cols1 =numpy.array([input().split() for _ in range(N)],int) p_cols1.shape = (N,P) p_cols2 =numpy.array([input().split() for _ in range(M)],int) p_cols2.shape = (M,P) concatenated = numpy.concatenate((p_cols1, p_cols2), axis = 0) print(concatenated)
[ "numpy.concatenate" ]
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# GCT634 (2018) HW1 # # Mar-18-2018: initial version # # <NAME> # import sys import os import numpy as np import matplotlib.pyplot as plt data_path = './dataset/' mfcc_path = './mfcc/' MFCC_DIM = 20 def mean_mfcc(dataset='train'): f = open(data_path + dataset + '_list.txt','r') if dataset == 'train'...
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import json from typing import Union, Optional, Tuple, List import numpy as np from sklearn.feature_extraction import DictVectorizer from sklearn.feature_extraction.text import TfidfVectorizer, CountVectorizer, TfidfTransformer from sklearn.model_selection import train_test_split from sklearn.preprocessing import Stan...
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# -*- coding: utf-8 -*- import random import numpy as np import scipy import pandas as pd import pandas import numpy import json def resizeFeature(inputData,newSize): # inputX: (temporal_length,feature_dimension) # originalSize=len(inputData) #print originalSize if originalSize==1: inputData=...
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"""Test functions for FOOOF analysis.""" import numpy as np from fooof.analysis import * ################################################################################################### ################################################################################################### def test_get_band_peak_fm(t...
[ "numpy.array", "numpy.empty", "numpy.array_equal" ]
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import numpy as np import unittest import coremltools.models.datatypes as datatypes from coremltools.models import neural_network as neural_network from coremltools.models import MLModel from coremltools.models.neural_network.printer import print_network_spec from coremltools.converters.nnssa.coreml.graph_pass.mlmodel_...
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import time, datetime, argparse import os, sys import numpy as np np.set_printoptions(precision=2) import matplotlib.pyplot as plt import copy as cp import pickle PROJECT_PATH = '/home/nbuckman/Dropbox (MIT)/DRL/2020_01_cooperative_mpc/mpc-multiple-vehicles/' sys.path.append(PROJECT_PATH) import casadi as cas import ...
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import numpy as np # softmax function def softmax(a): exp_a = np.exp(a) sum_a = np.sum(exp_a) return exp_a / sum_a # modified softmax function def modified_softmax(a): maxA = np.max(a) exp_a = np.exp(a - maxA) sum_a = np.sum(exp_a) return exp_a / sum_a
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from itertools import product import struct import pickle import numpy as np from scipy import sparse from scipy import isnan as scipy_isnan import numpy.matlib ASCII_FACET = """facet normal 0 0 0 outer loop vertex {face[0][0]:.4f} {face[0][1]:.4f} {face[0][2]:.4f} vertex {face[1][0]:.4f} {face[1][1]:.4f} {face[1][2]...
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import cv2 import numpy as np import matplotlib.pyplot as plt #from matplotlib import pyplot as plt from tkinter import filedialog from tkinter import * root = Tk() root.withdraw() root.filename = filedialog.askopenfilename(initialdir = "/",title = "Select file",filetypes = (("all files",".*"),("jpg files","...
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import sys from PyQt5.QtWidgets import * from PyQt5.QtCore import * from PyQt5.QtGui import * import qtawesome import matplotlib.pyplot as plt import csv import numpy as np import datetime import os class Stack: def __init__(self): self.items=[] def isEmpty(self): return self.i...
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#! /usr/bin/python # encoding=utf-8 import os import datetime,time from selenium import webdriver import config import threading import numpy as np def writelog(msg,log): nt=datetime.datetime.now().strftime('%Y-%m-%d %H-%M-%S') text="[%s] %s " % (nt,msg) os.system("echo %s >> %s" % (text.encode('utf8'),l...
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import numpy as np import pandas as pd import os import matplotlib.pyplot as plt from sklearn import datasets, linear_model from difflib import SequenceMatcher import seaborn as sns from statistics import mean from ast import literal_eval from scipy import stats from sklearn.linear_model import LinearRegression from s...
[ "matplotlib.pyplot.ylabel", "numpy.array", "pandas.read_excel", "matplotlib.lines.Line2D", "numpy.divide", "numpy.mean", "seaborn.regplot", "matplotlib.pyplot.xlabel", "matplotlib.pyplot.plot", "matplotlib.pyplot.close", "pandas.DataFrame", "seaborn.swarmplot", "matplotlib.pyplot.savefig", ...
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import time from datetime import datetime import numpy as np from matplotlib import pyplot as plt from matplotlib.dates import epoch2num import device_factory if __name__ == '__main__': amount = 50 devices = [] for i in range(amount): device = device_factory.ecopower_4(i, i) ...
[ "datetime.datetime", "numpy.mean", "device_factory.ecopower_4", "numpy.abs", "matplotlib.pyplot.gcf", "matplotlib.pyplot.twinx", "numpy.sum", "numpy.zeros", "matplotlib.pyplot.subplot", "numpy.arange", "matplotlib.pyplot.show" ]
[((1207, 1227), 'numpy.zeros', 'np.zeros', (['sample_dur'], {}), '(sample_dur)\n', (1215, 1227), True, 'import numpy as np\n'), ((2003, 2020), 'numpy.sum', 'np.sum', (['P'], {'axis': '(0)'}), '(P, axis=0)\n', (2009, 2020), True, 'import numpy as np\n'), ((2031, 2049), 'numpy.sum', 'np.sum', (['Th'], {'axis': '(0)'}), '...
""" Tests for the h5py.Datatype class. """ from __future__ import absolute_import from itertools import count import numpy as np import h5py from ..common import ut, TestCase class TestVlen(TestCase): """ Check that storage of vlen strings is carried out correctly. """ def assertVlenArrayEq...
[ "h5py.check_dtype", "numpy.random.rand", "numpy.random.random_integers", "h5py.File", "h5py.h5t.py_create", "numpy.array", "itertools.count", "numpy.empty", "numpy.random.randint", "h5py.special_dtype", "numpy.dtype" ]
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from pathlib import Path import numpy as np import pickle import argparse import errno import sys def file_exists(path): return Path(path).is_file() def dir_exists(path): return Path(path).is_dir() def remove_extension(x): return x.split('.')[0] def print_error(type, file): print(FileNotFoundError(e...
[ "pickle.dump", "argparse.ArgumentParser", "pathlib.Path", "numpy.where", "numpy.asarray", "sys.exit" ]
[((1358, 1499), 'argparse.ArgumentParser', 'argparse.ArgumentParser', ([], {'description': '"""Filter Unicode characters based on a given threshold between 0 and 1 and a similarity matrix"""'}), "(description=\n 'Filter Unicode characters based on a given threshold between 0 and 1 and a similarity matrix'\n )\n",...
#!/usr/bin/python from aos.util.trapezoid_profile import TrapezoidProfile from frc971.control_loops.python import control_loop from frc971.control_loops.python import angular_system from frc971.control_loops.python import controls import copy import numpy import sys from matplotlib import pylab import gflags import gl...
[ "frc971.control_loops.python.control_loop.BAG", "gflags.DEFINE_bool", "frc971.control_loops.python.angular_system.PlotKick", "glog.fatal", "frc971.control_loops.python.angular_system.PlotMotion", "copy.copy", "numpy.matrix", "glog.init", "frc971.control_loops.python.angular_system.WriteAngularSystem...
[((852, 869), 'copy.copy', 'copy.copy', (['kWrist'], {}), '(kWrist)\n', (861, 869), False, 'import copy\n'), ((954, 971), 'copy.copy', 'copy.copy', (['kWrist'], {}), '(kWrist)\n', (963, 971), False, 'import copy\n'), ((1009, 1026), 'copy.copy', 'copy.copy', (['kWrist'], {}), '(kWrist)\n', (1018, 1026), False, 'import c...
#! -*- coding:utf-8 -*- # 语义相似度任务-无监督:训练集为网上pretrain数据, dev集为sts-b from bert4torch.tokenizers import Tokenizer from bert4torch.models import build_transformer_model, BaseModel from bert4torch.snippets import sequence_padding, Callback, ListDataset import torch.nn as nn import torch import torch.optim as optim from to...
[ "torch.ones_like", "torch.nn.CrossEntropyLoss", "sklearn.metrics.pairwise.paired_cosine_distances", "numpy.random.rand", "numpy.random.choice", "torch.max", "random.seed", "bert4torch.tokenizers.Tokenizer", "bert4torch.snippets.sequence_padding", "torch.cuda.is_available", "torch.no_grad", "nu...
[((503, 520), 'random.seed', 'random.seed', (['(2022)'], {}), '(2022)\n', (514, 520), False, 'import random\n'), ((521, 541), 'numpy.random.seed', 'np.random.seed', (['(2002)'], {}), '(2002)\n', (535, 541), True, 'import numpy as np\n'), ((963, 1003), 'bert4torch.tokenizers.Tokenizer', 'Tokenizer', (['dict_path'], {'do...
# @Time : 2020/10/6 # @Author : <NAME> # @Email : <EMAIL> """ recbole.quick_start ######################## """ import logging from logging import getLogger from recbole.config import Config from recbole.data import create_dataset, data_preparation from recbole.utils import init_logger, get_model, get_trainer, init...
[ "logging.getLogger", "recbole.utils.init_seed", "recbole.config.Config", "numpy.save", "seaborn.set", "scipy.linalg.svdvals", "matplotlib.pyplot.plot", "recbole.utils.init_logger", "numpy.dot", "matplotlib.pyplot.scatter", "recbole.utils.get_trainer", "matplotlib.pyplot.ylim", "matplotlib.py...
[((944, 1044), 'recbole.config.Config', 'Config', ([], {'model': 'model', 'dataset': 'dataset', 'config_file_list': 'config_file_list', 'config_dict': 'config_dict'}), '(model=model, dataset=dataset, config_file_list=config_file_list,\n config_dict=config_dict)\n', (950, 1044), False, 'from recbole.config import Con...
import matplotlib.pyplot as plt from matplotlib import collections from matplotlib.lines import Line2D def autosize(fig=None, figsize=None): ## Take current figure if no figure provided if fig is None: fig = plt.gcf() if figsize is None: ## Get size of figure figsize = fig.get_s...
[ "numpy.random.normal", "matplotlib.pyplot.ylabel", "matplotlib.pyplot.gcf", "matplotlib.pyplot.xlabel", "matplotlib.pyplot.figure", "matplotlib.pyplot.tight_layout", "numpy.random.uniform", "matplotlib.pyplot.scatter", "matplotlib.pyplot.title", "plottify.autosize", "matplotlib.pyplot.show" ]
[((1442, 1460), 'matplotlib.pyplot.tight_layout', 'plt.tight_layout', ([], {}), '()\n', (1458, 1460), True, 'import matplotlib.pyplot as plt\n'), ((1603, 1644), 'numpy.random.uniform', 'np.random.uniform', ([], {'low': '(-5)', 'high': '(5)', 'size': 'n'}), '(low=-5, high=5, size=n)\n', (1620, 1644), True, 'import numpy...
import numpy as np from time import time import matplotlib.pyplot as plt measure2index={"y-coordinate":0,"x-coordinate":1,"timestamp":2, "button_status":3,"tilt":4, "elevation":5,"pressure":6} index2measure=list(measure2index.keys()) task2index={"spiral":0,"l":1,"le":2 ,"les":3,"lektorka" :4,"porovnat":5,"nepopadnout...
[ "numpy.identity", "numpy.mean", "matplotlib.pyplot.ylabel", "matplotlib.pyplot.xlabel", "matplotlib.pyplot.plot", "numpy.floor", "numpy.max", "matplotlib.pyplot.subplot", "numpy.array", "matplotlib.pyplot.figure", "numpy.around", "numpy.min", "time.time", "matplotlib.pyplot.legend" ]
[((938, 952), 'numpy.identity', 'np.identity', (['(8)'], {}), '(8)\n', (949, 952), True, 'import numpy as np\n'), ((1071, 1092), 'numpy.array', 'np.array', (['downsampled'], {}), '(downsampled)\n', (1079, 1092), True, 'import numpy as np\n'), ((1295, 1314), 'numpy.array', 'np.array', (['upsampled'], {}), '(upsampled)\n...
import numpy as np import torch from torch_utils import training_stats from torch_utils import misc from torch_utils.ops import conv2d_gradfix import torch.nn.functional as F import torchvision.transforms as T import clip import dnnlib import random #--------------------------------------------------------------------...
[ "numpy.sqrt", "torch.exp", "torch.full_like", "torch.autograd.profiler.record_function", "torch.nn.functional.interpolate", "torch.distributed.get_rank", "torch_utils.training_stats.report", "torch.nn.functional.softmax", "torch.randint", "torch.zeros_like", "torch.randn", "torch.distributed.a...
[((635, 661), 'torch.nn.Linear', 'torch.nn.Linear', (['(512)', '(1024)'], {}), '(512, 1024)\n', (650, 661), False, 'import torch\n'), ((685, 712), 'torch.nn.Linear', 'torch.nn.Linear', (['(1024)', '(1024)'], {}), '(1024, 1024)\n', (700, 712), False, 'import torch\n'), ((736, 763), 'torch.nn.Linear', 'torch.nn.Linear', ...
from sklearn.model_selection import train_test_split from sklearn import metrics from sklearn.metrics import accuracy_score from sklearn.metrics import roc_auc_score import numpy as np import pandas as pd import matplotlib.pyplot as plt def do_ml(merged_df, test_size, ml_model, **kwargs): train_data = merged_df.d...
[ "matplotlib.pyplot.xticks", "matplotlib.pyplot.show", "matplotlib.pyplot.plot", "matplotlib.pyplot.rcParams.update", "matplotlib.pyplot.figure", "numpy.array", "pandas.DataFrame", "numpy.ravel", "sklearn.metrics.accuracy_score", "sklearn.metrics.confusion_matrix" ]
[((992, 1037), 'sklearn.metrics.confusion_matrix', 'metrics.confusion_matrix', (['y_test', 'predictions'], {}), '(y_test, predictions)\n', (1016, 1037), False, 'from sklearn import metrics\n'), ((1059, 1102), 'sklearn.metrics.accuracy_score', 'metrics.accuracy_score', (['y_test', 'predictions'], {}), '(y_test, predicti...
import numpy as np import tensorflow as tf from keras import backend as K from tqdm import tqdm def write_log(callback, names, logs, batch_no): for name, value in zip(names, logs): summary = tf.Summary() summary_value = summary.value.add() summary_value.simple_value = value ...
[ "numpy.array", "tqdm.tqdm", "tensorflow.Summary", "keras.backend.get_value" ]
[((211, 223), 'tensorflow.Summary', 'tf.Summary', ([], {}), '()\n', (221, 223), True, 'import tensorflow as tf\n'), ((730, 822), 'tqdm.tqdm', 'tqdm', ([], {'total': 'epoch_step', 'desc': 'f"""Epoch {epoch + 1}/{Epoch}"""', 'postfix': 'dict', 'mininterval': '(0.3)'}), "(total=epoch_step, desc=f'Epoch {epoch + 1}/{Epoch}...
# -*- coding: utf-8 -*- """ Created on Wed Sep 15 08:32:03 2021 @author: User """ import numpy as np import matplotlib.pyplot as plt a = np.array([[1, 2, 3, 4], [5, 6, 7, 8], [9, 10, 11, 12]]) print(a) print(a[0]) print(a.ndim) #te dice la cantidad de ejes (o dimensiones) del arreglo print(a.shape) #Te va a dar una t...
[ "numpy.random.random", "numpy.array" ]
[((138, 193), 'numpy.array', 'np.array', (['[[1, 2, 3, 4], [5, 6, 7, 8], [9, 10, 11, 12]]'], {}), '([[1, 2, 3, 4], [5, 6, 7, 8], [9, 10, 11, 12]])\n', (146, 193), True, 'import numpy as np\n'), ((577, 596), 'numpy.random.random', 'np.random.random', (['(3)'], {}), '(3)\n', (593, 596), True, 'import numpy as np\n')]
import numpy as np import os, sys os.environ['TF_CPP_MIN_LOG_LEVEL'] = '3' from tensorflow.keras.models import Model import tensorflow as tf from PIL import Image from utils_rtp import ProMP class Predictor: def __init__(self, encoder_model_path, predictor_model_path): self.all_phi = self.promp_train(...
[ "tensorflow.cast", "numpy.transpose", "utils_rtp.ProMP", "numpy.hstack", "numpy.zeros", "tensorflow.keras.models.load_model", "numpy.vstack", "numpy.load", "numpy.save" ]
[((2017, 2067), 'numpy.load', 'np.load', (['"""/home/arshad/catkin_ws/image_xy_rtp.npy"""'], {}), "('/home/arshad/catkin_ws/image_xy_rtp.npy')\n", (2024, 2067), True, 'import numpy as np\n'), ((2175, 2246), 'numpy.save', 'np.save', (['"""/home/arshad/catkin_ws/predicted_joints_values_rtp.npy"""', 'traj'], {}), "('/home...
''' --- I M P O R T S T A T E M E N T S --- ''' import coloredlogs, logging coloredlogs.install() import numpy as np ''' === S T A R T O F C L A S S E V A L M E T R I C === [About] Object class for calculating average values. [Init Args] - name: String for the variable name to calc...
[ "logging.getLogger", "coloredlogs.install", "logging.warning", "numpy.array", "logging.info" ]
[((79, 100), 'coloredlogs.install', 'coloredlogs.install', ([], {}), '()\n', (98, 100), False, 'import coloredlogs, logging\n'), ((9112, 9140), 'logging.info', 'logging.info', (['"""------------"""'], {}), "('------------')\n", (9124, 9140), False, 'import coloredlogs, logging\n'), ((3791, 3828), 'logging.warning', 'lo...
import os,sys import pandas as pd import numpy as np import subprocess from tqdm import tqdm from ras_method import ras_method import warnings warnings.filterwarnings('ignore') def est_trade_value(x,output_new,sector): """ Function to estimate the trade value between two sectors """ if (sector is not ...
[ "pandas.MultiIndex.from_product", "pandas.MultiIndex.from_arrays", "os.path.join", "ras_method.ras_method", "numpy.array", "pandas.DataFrame", "pandas.concat", "warnings.filterwarnings" ]
[((144, 177), 'warnings.filterwarnings', 'warnings.filterwarnings', (['"""ignore"""'], {}), "('ignore')\n", (167, 177), False, 'import warnings\n'), ((986, 1012), 'os.path.join', 'os.path.join', (['""".."""', '"""data"""'], {}), "('..', 'data')\n", (998, 1012), False, 'import os, sys\n'), ((3994, 4163), 'pandas.MultiIn...
import networkx as nx import numpy as np import matplotlib.pyplot as plt def node_match(n1, n2): if n1['op'] == n2['op']: return True else: return False def edge_match(e1, e2): return True def gen_graph(adj, ops): G = nx.DiGraph() for k, op in enumerate(ops): G.add_node(k,...
[ "networkx.DiGraph", "numpy.array", "networkx.graph_edit_distance", "matplotlib.pyplot.subplot", "networkx.draw" ]
[((253, 265), 'networkx.DiGraph', 'nx.DiGraph', ([], {}), '()\n', (263, 265), True, 'import networkx as nx\n'), ((1623, 1723), 'numpy.array', 'np.array', (['[[0, 1, 1, 1, 0], [0, 0, 1, 0, 0], [0, 0, 0, 0, 1], [0, 0, 0, 0, 1], [0, 0,\n 0, 0, 0]]'], {}), '([[0, 1, 1, 1, 0], [0, 0, 1, 0, 0], [0, 0, 0, 0, 1], [0, 0, 0, ...
import os import pickle import numpy as np from PIL import Image import torch from torch.utils.data import Dataset from torchvision import transforms import h5py from transforms import Scale class CLEVR(Dataset): def __init__(self, root, split='train', transform=None): features_path = os.path.join(root, ...
[ "transforms.Scale", "torch.LongTensor", "torch.stack", "os.path.join", "pickle.load", "torch.from_numpy", "torchvision.transforms.RandomCrop", "numpy.zeros", "torchvision.transforms.Normalize", "torchvision.transforms.Pad", "torchvision.transforms.ToTensor" ]
[((1611, 1658), 'numpy.zeros', 'np.zeros', (['(batch_size, max_len)'], {'dtype': 'np.int64'}), '((batch_size, max_len), dtype=np.int64)\n', (1619, 1658), True, 'import numpy as np\n'), ((301, 331), 'os.path.join', 'os.path.join', (['root', '"""features"""'], {}), "(root, 'features')\n", (313, 331), False, 'import os\n'...
import pytest import numpy as np import pandas as pd from xgboost_distribution.distributions import LogNormal @pytest.fixture def lognormal(): return LogNormal() def test_target_validation(lognormal): valid_target = np.array([0.5, 1, 4, 5, 10]) lognormal.check_target(valid_target) @pytest.mark.param...
[ "pandas.Series", "numpy.log", "xgboost_distribution.distributions.LogNormal", "numpy.array", "pytest.raises", "numpy.testing.assert_array_equal" ]
[((158, 169), 'xgboost_distribution.distributions.LogNormal', 'LogNormal', ([], {}), '()\n', (167, 169), False, 'from xgboost_distribution.distributions import LogNormal\n'), ((230, 258), 'numpy.array', 'np.array', (['[0.5, 1, 4, 5, 10]'], {}), '([0.5, 1, 4, 5, 10])\n', (238, 258), True, 'import numpy as np\n'), ((1160...
#!/usr/bin/env python3 """ Main script for workload forecasting. Example usage: - Generate data (runs OLTP benchmark on the built database) and perform training, and save the trained model ./forecaster --gen_data --models=LSTM --model_save_path=model.pickle - Use the trained models (LSTM) to generate predictions. ...
[ "pickle.dump", "argparse.ArgumentParser", "pickle.load", "numpy.array", "json.load", "functools.lru_cache" ]
[((1707, 1767), 'argparse.ArgumentParser', 'argparse.ArgumentParser', ([], {'description': '"""Query Load Forecaster"""'}), "(description='Query Load Forecaster')\n", (1730, 1767), False, 'import argparse\n'), ((8504, 8525), 'functools.lru_cache', 'lru_cache', ([], {'maxsize': '(32)'}), '(maxsize=32)\n', (8513, 8525), ...
import os, sys from distutils.util import strtobool import numpy as np import tensorflow as tf import tensorflow.keras.backend as K from tensorflow.python.util import nest, tf_inspect from tensorflow.python.eager import tape # from tensorflow.python.ops.custom_gradient import graph_mode_decorator # 是否使用重计...
[ "tensorflow.python.eager.tape.stop_recording", "numpy.sqrt", "os.environ.get", "tensorflow.python.util.nest.flatten", "tensorflow.keras.backend.ndim", "tensorflow.python.util.tf_inspect.getfullargspec", "tensorflow.GradientTape", "tensorflow.keras.backend.pow", "tensorflow.keras.backend.dtype", "t...
[((348, 380), 'os.environ.get', 'os.environ.get', (['"""RECOMPUTE"""', '"""0"""'], {}), "('RECOMPUTE', '0')\n", (362, 380), False, 'import os, sys\n'), ((2470, 2480), 'tensorflow.keras.backend.dtype', 'K.dtype', (['x'], {}), '(x)\n', (2477, 2480), True, 'import tensorflow.keras.backend as K\n'), ((6013, 6030), 'doctest...
# utils for working with 3d-protein structures import os import numpy as np import torch from functools import wraps from einops import rearrange, repeat # import torch_sparse # only needed for sparse nth_deg adj calculation # bio from Bio import SeqIO import itertools import string # sidechainnet from sidechainnet...
[ "numpy.random.rand", "torch.sin", "torch.det", "torch.searchsorted", "torch.cdist", "torch.min", "numpy.array", "torch.cos", "numpy.linalg.norm", "numpy.arange", "torch.logical_or", "numpy.mean", "numpy.cross", "torch.mean", "einops.repeat", "torch.logical_not", "functools.wraps", ...
[((641, 660), 'sidechainnet.utils.sequence.ProteinVocabulary', 'ProteinVocabulary', ([], {}), '()\n', (658, 660), False, 'from sidechainnet.utils.sequence import ProteinVocabulary, ONE_TO_THREE_LETTER_MAP\n'), ((842, 898), 'torch.linspace', 'torch.linspace', (['(2)', '(20)'], {'steps': 'constants.DISTOGRAM_BUCKETS'}), ...
import numpy as np import tectosaur.util.gpu as gpu from tectosaur.fmm.c2e import build_c2e import logging logger = logging.getLogger(__name__) def make_tree(m, cfg, max_pts_per_cell): tri_pts = m[0][m[1]] centers = np.mean(tri_pts, axis = 1) pt_dist = tri_pts - centers[:,np.newaxis,:] Rs = np.max(np...
[ "logging.getLogger", "numpy.mean", "tectosaur.fmm.c2e.build_c2e", "tectosaur.util.gpu.to_gpu", "numpy.array", "numpy.empty_like", "numpy.linalg.norm" ]
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import __init__ import os #os.environ['LD_LIBRARY_PATH'] += ':/usr/local/cuda-11.1/bin64:/usr/local/cuda-11.2/bin64' import numpy as np import torch import torch.multiprocessing as mp import torch_geometric.datasets as GeoData from torch_geometric.loader import DenseDataLoader import torch_geometric.transforms as T...
[ "utils.metrics.AverageMeter", "torch.nn.CrossEntropyLoss", "torch.utils.data.distributed.DistributedSampler", "logging.info", "torch.utils.tensorboard.SummaryWriter", "numpy.mean", "config.OptInit", "comm.is_main_process", "comm.get_local_rank", "numpy.isnan", "parallel_wrapper.launch", "utils...
[((799, 832), 'torch.utils.tensorboard.SummaryWriter', 'SummaryWriter', ([], {'log_dir': '"""log/mlp4"""'}), "(log_dir='log/mlp4')\n", (812, 832), False, 'from torch.utils.tensorboard import SummaryWriter\n'), ((2714, 2727), 'numpy.mean', 'np.mean', (['ious'], {}), '(ious)\n', (2721, 2727), True, 'import numpy as np\n'...
import torch import torch.nn as nn from torchvision.datasets.vision import VisionDataset from PIL import Image import os, sys, math import os.path import torch import json import torch.utils.model_zoo as model_zoo from Yolo_v2_pytorch.src.utils import * from Yolo_v2_pytorch.src.yolo_net import Yolo from Yolo_v2_pytorc...
[ "torch.nn.ReLU", "torch.nn.Dropout", "torch.sin", "torch.exp", "math.log", "numpy.array", "torch.cos", "torch.sum", "torch.nn.AvgPool2d", "torch.nn.functional.softmax", "torch.arange", "torch.nn.BatchNorm2d", "Yolo_v2_pytorch.src.yolo_tunning.YoloD", "torch.nn.LayerNorm", "torch.matmul",...
[((1750, 1839), 'torch.nn.Conv2d', 'nn.Conv2d', (['in_planes', 'out_planes'], {'kernel_size': '(3)', 'stride': 'stride', 'padding': '(1)', 'bias': '(False)'}), '(in_planes, out_planes, kernel_size=3, stride=stride, padding=1,\n bias=False)\n', (1759, 1839), True, 'import torch.nn as nn\n'), ((6545, 6631), 'torch.nn....
""" The ARIMA model. """ import torch import numpy as np class ARIMA(torch.nn.Module): """ARIMA [summary] """ def __init__(self, p: int = 0, d: int = 0, q: int = 0) -> None: """__init__ General ARIMA model constructor. Args: ...
[ "numpy.random.normal", "torch.pow", "torch.diff", "torch.no_grad", "torch.zeros", "torch.rand" ]
[((789, 802), 'torch.rand', 'torch.rand', (['p'], {}), '(p)\n', (799, 802), False, 'import torch\n'), ((889, 902), 'torch.rand', 'torch.rand', (['q'], {}), '(q)\n', (899, 902), False, 'import torch\n'), ((989, 1002), 'torch.rand', 'torch.rand', (['d'], {}), '(d)\n', (999, 1002), False, 'import torch\n'), ((1067, 1080),...
import matplotlib.pyplot as plt import numpy as np import math import cv2 kernel = np.ones((3, 3), np.int8) # 去除雜訊 def eraseImage (image): return cv2.erode(image, kernel, iterations = 1) # 模糊圖片 def blurImage (image): return cv2.GaussianBlur(image, (5, 5), 0) # 銳利化圖片 # threshold1,2,較小的值為作為偵測邊界的最小值 def edgedImage...
[ "cv2.rectangle", "numpy.ones", "cv2.resize", "cv2.erode", "matplotlib.pyplot.plot", "cv2.boundingRect", "cv2.imshow", "cv2.waitKey", "cv2.destroyAllWindows", "cv2.findContours", "cv2.dilate", "cv2.Canny", "cv2.imread", "cv2.GaussianBlur", "matplotlib.pyplot.show" ]
[((84, 108), 'numpy.ones', 'np.ones', (['(3, 3)', 'np.int8'], {}), '((3, 3), np.int8)\n', (91, 108), True, 'import numpy as np\n'), ((150, 188), 'cv2.erode', 'cv2.erode', (['image', 'kernel'], {'iterations': '(1)'}), '(image, kernel, iterations=1)\n', (159, 188), False, 'import cv2\n'), ((231, 265), 'cv2.GaussianBlur',...
import numpy as np import tensorflow as tf import sys, os sys.path.extend(['alg/', 'models/']) from visualisation import plot_images from encoder_no_shared import encoder, recon from utils import init_variables, save_params, load_params, load_data from eval_test_ll import construct_eval_func dimZ = 50 dimH = 500 n_cha...
[ "eval_test_ll.construct_eval_func", "generator.construct_gen", "notmnist.load_notmnist", "vae_laplace.init_fisher_accum", "visualisation.plot_images", "vae_si.update_si_reg", "tensorflow.placeholder", "tensorflow.Session", "utils.load_params", "os.path.isdir", "sys.path.extend", "os.mkdir", ...
[((58, 94), 'sys.path.extend', 'sys.path.extend', (["['alg/', 'models/']"], {}), "(['alg/', 'models/'])\n", (73, 94), False, 'import sys, os\n'), ((580, 608), 'config.config', 'config', (['data_name', 'n_channel'], {}), '(data_name, n_channel)\n', (586, 608), False, 'from config import config\n'), ((1757, 1810), 'tenso...
# raise NotImplementedError("Did not check!") """MSCOCO Semantic Segmentation pretraining for VOC.""" import os from tqdm import trange from PIL import Image, ImageOps, ImageFilter import numpy as np import pickle from gluoncv.data.segbase import SegmentationDataset class COCOSegmentation(SegmentationDataset): ...
[ "os.path.exists", "pickle.dump", "os.path.join", "pycocotools.coco.COCO", "pickle.load", "numpy.sum", "numpy.zeros", "os.path.expanduser" ]
[((471, 515), 'os.path.expanduser', 'os.path.expanduser', (['"""~/.mxnet/datasets/coco"""'], {}), "('~/.mxnet/datasets/coco')\n", (489, 515), False, 'import os\n'), ((1266, 1280), 'pycocotools.coco.COCO', 'COCO', (['ann_file'], {}), '(ann_file)\n', (1270, 1280), False, 'from pycocotools.coco import COCO\n'), ((1322, 13...
"""Cell parameter random initializations.""" from typing import Any, Dict import numpy as np from ..parameters import ( Height, NewCellBendLowerLower, NewCellBendLowerUpper, NewCellBendOverallLower, NewCellBendOverallUpper, NewCellBendUpperLower, NewCellBendUpperUpper, NewCellLength1Me...
[ "numpy.sin", "numpy.cos" ]
[((3328, 3341), 'numpy.cos', 'np.cos', (['angle'], {}), '(angle)\n', (3334, 3341), True, 'import numpy as np\n'), ((3397, 3410), 'numpy.sin', 'np.sin', (['angle'], {}), '(angle)\n', (3403, 3410), True, 'import numpy as np\n')]
import qiskit import numpy as np import matplotlib.pyplot as plt import json from graph import * # Random comment P =1 def makeCircuit(inbits, outbits): q = qiskit.QuantumRegister(inbits+outbits) c = qiskit.ClassicalRegister(inbits+outbits) qc = qiskit.QuantumCircuit(q, c) q_input = [q[i] for i in ran...
[ "qiskit.ClassicalRegister", "matplotlib.pyplot.title", "qiskit.execute", "matplotlib.pyplot.ylabel", "matplotlib.pyplot.xlabel", "json.dump", "numpy.binary_repr", "numpy.linspace", "matplotlib.pyplot.errorbar", "json.load", "qiskit.QuantumCircuit", "qiskit.QuantumRegister", "matplotlib.pyplo...
[((162, 202), 'qiskit.QuantumRegister', 'qiskit.QuantumRegister', (['(inbits + outbits)'], {}), '(inbits + outbits)\n', (184, 202), False, 'import qiskit\n'), ((209, 251), 'qiskit.ClassicalRegister', 'qiskit.ClassicalRegister', (['(inbits + outbits)'], {}), '(inbits + outbits)\n', (233, 251), False, 'import qiskit\n'),...
"""Simple code for training an RNN for motion prediction.""" import os import sys import time import numpy as np import torch import torch.optim as optim from torch.autograd import Variable import mtfixb_model import mtfixb_model2 import parseopts def create_model(args, total_num_batches): """Create MT model a...
[ "numpy.sqrt", "torch.from_numpy", "parseopts.parse_args", "torch.exp", "parseopts.initial_arg_transform", "mtfixb_model2.MTGRU_NoBias", "mtfixb_model.MTGRU", "mtfixb_model.DataIterator", "mtfixb_model.OpenLoopGRU", "sys.stdout.flush", "torch.optim.SGD", "mtfixb_model.DynamicsDict", "numpy.in...
[((890, 1307), 'mtfixb_model.MTGRU', 'mtfixb_model.MTGRU', (['args.seq_length_out', 'args.decoder_size', 'args.decoder_size2', 'args.batch_size', 'total_num_batches', 'args.k', 'args.size_psi_hidden', 'args.size_psi_lowrank', 'args.bottleneck'], {'output_dim': 'args.human_size', 'input_dim': 'args.input_size', 'dropout...
import time import numpy as np import vtk from vtk.util import numpy_support from svtk.lib.toolbox.integer import minmax from svtk.lib.toolbox.idarray import IdArray from svtk.lib.toolbox.numpy_helpers import normalize import math as m class VTKAnimationTimerCallback(object): """This class is called every few m...
[ "numpy.tile", "numpy.allclose", "math.ceil", "numpy.cross", "time.clock", "math.floor", "svtk.lib.toolbox.idarray.IdArray", "vtk.util.numpy_support.numpy_to_vtkIdTypeArray", "svtk.lib.toolbox.integer.minmax", "numpy.append", "numpy.array", "numpy.matmul", "vtk.util.numpy_support.numpy_to_vtk...
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import time import numpy as np from tqdm import tqdm from utils import RandomCNOT, RandomCNOTs def SimulatedAnnealing(quantum_count, layer_count, solver, epochs=100, save_path=None, global_best_score=0): #TODO: best_score = 0 cnot = RandomCNOTs(quantum_count, layer_count) sc, model = solver(cnot) ...
[ "utils.RandomCNOTs", "numpy.random.randint", "time.time", "utils.RandomCNOT" ]
[((247, 286), 'utils.RandomCNOTs', 'RandomCNOTs', (['quantum_count', 'layer_count'], {}), '(quantum_count, layer_count)\n', (258, 286), False, 'from utils import RandomCNOT, RandomCNOTs\n'), ((591, 602), 'time.time', 'time.time', ([], {}), '()\n', (600, 602), False, 'import time\n'), ((2114, 2125), 'time.time', 'time.t...
from __future__ import print_function, division import numpy as np from numpy import identity, dot, zeros, zeros_like def rf_den_via_rf0(self, rf0, v): """ Whole matrix of the interacting response via non-interacting response and interaction""" rf = zeros_like(rf0) I = identity(rf0.shape[1]) for ir,r in enume...
[ "numpy.identity", "numpy.dot", "numpy.zeros_like" ]
[((255, 270), 'numpy.zeros_like', 'zeros_like', (['rf0'], {}), '(rf0)\n', (265, 270), False, 'from numpy import identity, dot, zeros, zeros_like\n'), ((278, 300), 'numpy.identity', 'identity', (['rf0.shape[1]'], {}), '(rf0.shape[1])\n', (286, 300), False, 'from numpy import identity, dot, zeros, zeros_like\n'), ((364, ...
import os import logging import numpy as np from typing import Optional import torch from torch.utils.data import DataLoader from ..eval import Metric from .dataset import CHMMBaseDataset from .dataset import collate_fn as default_collate_fn logger = logging.getLogger(__name__) OUT_RECALL = 0.9 OUT_PRECISION = 0.8 ...
[ "logging.getLogger", "torch.load", "os.path.join", "os.path.split", "os.path.isfile", "numpy.random.dirichlet", "torch.save", "torch.utils.data.DataLoader", "torch.zeros" ]
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# -*- coding: utf-8 -*- """ Created on Wed Jun 28 13:03:05 2017 @author: <NAME> """ import cntk as C import _cntk_py import cntk.layers import cntk.initializer import cntk.losses import cntk.metrics import cntk.logging import cntk.io.transforms as xforms import cntk.io import cntk.train import os import numpy as np i...
[ "os.path.exists", "yolo2.Yolo2Metric", "_cntk_py.set_computation_network_trace_level", "cntk.Trainer", "os.path.join", "cntk.learners.momentum_sgd", "yolo2.Yolo2Error", "cntk.io.transforms.color", "cntk.learners.momentum_schedule", "cntk.input_variable", "cntk.io.transforms.scale", "numpy.arra...
[((469, 501), 'os.path.join', 'os.path.join', (['abs_path', '"""Models"""'], {}), "(abs_path, 'Models')\n", (481, 501), False, 'import os\n'), ((429, 454), 'os.path.abspath', 'os.path.abspath', (['__file__'], {}), '(__file__)\n', (444, 454), False, 'import os\n'), ((2267, 2326), 'cntk.input_variable', 'C.input_variable...
# -*- coding: utf-8 -*- """ Created on Thu Aug 13 09:52:47 2015 @author: wirkert """ import unittest import os import numpy as np import msi.msimanipulations as msimani from msi.io.nrrdreader import NrrdReader from msi.io.nrrdwriter import NrrdWriter from msi.test import helpers class TestNrrdWriter(unittest.TestC...
[ "msi.io.nrrdreader.NrrdReader", "os.remove", "os.path.isfile", "numpy.array", "msi.msimanipulations.calculate_mean_spectrum", "msi.test.helpers.getFakeMsi", "msi.io.nrrdwriter.NrrdWriter" ]
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import matplotlib.pyplot as pl import os import numpy as np from ticle.data.dataHandler import normalizeData,load_file from ticle.analysis.analysis import get_phases,normalize_phase pl.rc('xtick', labelsize='x-small') pl.rc('ytick', labelsize='x-small') pl.rc('font', family='serif') pl.rcParams.update({'font.size': 2...
[ "os.makedirs", "matplotlib.pyplot.ylabel", "matplotlib.pyplot.xlabel", "matplotlib.pyplot.plot", "ticle.data.dataHandler.load_file", "os.getcwd", "ticle.data.dataHandler.normalizeData", "matplotlib.pyplot.rcParams.update", "matplotlib.pyplot.figure", "ticle.analysis.analysis.get_phases", "numpy....
[((184, 219), 'matplotlib.pyplot.rc', 'pl.rc', (['"""xtick"""'], {'labelsize': '"""x-small"""'}), "('xtick', labelsize='x-small')\n", (189, 219), True, 'import matplotlib.pyplot as pl\n'), ((220, 255), 'matplotlib.pyplot.rc', 'pl.rc', (['"""ytick"""'], {'labelsize': '"""x-small"""'}), "('ytick', labelsize='x-small')\n"...
# -------------------------------------------------------- # Fast R-CNN # Copyright (c) 2015 Microsoft # Licensed under The MIT License [see LICENSE for details] # Written by <NAME> # Extended by <NAME> # -------------------------------------------------------- import os import cv2 import numpy as np import torch impor...
[ "os.path.exists", "xml.etree.ElementTree.parse", "cv2.flip", "numpy.random.rand", "numpy.where", "os.path.join", "numpy.array", "cv2.imread" ]
[((3434, 3493), 'os.path.join', 'os.path.join', (['self.data_path', '"""Annotations"""', "(index + '.xml')"], {}), "(self.data_path, 'Annotations', index + '.xml')\n", (3446, 3493), False, 'import os\n'), ((3509, 3527), 'xml.etree.ElementTree.parse', 'ET.parse', (['filename'], {}), '(filename)\n', (3517, 3527), True, '...
# Machine Learning Online Class - Exercise 2: Logistic Regression # # Instructions # ------------ # # This file contains code that helps you get started on the logistic # regression exercise. You will need to complete the following functions # in this exericse: # # sigmoid.py # costFunction.py # predic...
[ "numpy.mean", "predict.predict", "numpy.ones", "matplotlib.pyplot.ylabel", "scipy.optimize.fmin_bfgs", "matplotlib.pyplot.xlabel", "plotDecisionBoundary.plot_decision_boundary", "numpy.array", "numpy.zeros", "costFunction.cost_function", "matplotlib.pyplot.ion", "matplotlib.pyplot.axis", "nu...
[((696, 705), 'matplotlib.pyplot.ion', 'plt.ion', ([], {}), '()\n', (703, 705), True, 'import matplotlib.pyplot as plt\n'), ((814, 855), 'numpy.loadtxt', 'np.loadtxt', (['"""ex2data1.txt"""'], {'delimiter': '""","""'}), "('ex2data1.txt', delimiter=',')\n", (824, 855), True, 'import numpy as np\n'), ((1827, 1855), 'matp...
#poly_gauss_coil model #conversion of Poly_GaussCoil.py #converted by <NAME>, Mar 2016 r""" This empirical model describes the scattering from *polydisperse* polymer chains in theta solvents or polymer melts, assuming a Schulz-Zimm type molecular weight distribution. To describe the scattering from *monodisperse* poly...
[ "numpy.expm1", "numpy.polyval", "numpy.power", "numpy.random.uniform" ]
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import os from itertools import product from concurrent import futures from contextlib import closing from datetime import datetime import numpy as np from . import _z5py from .file import File, S3File from .dataset import Dataset from .shape_utils import normalize_slices def product1d(inrange): for ii in inrang...
[ "urllib2.urlopen", "zipfile.ZipFile", "datetime.datetime.utcnow", "concurrent.futures.ThreadPoolExecutor", "itertools.product", "os.path.join", "imageio.volread", "numpy.sum" ]
[((11994, 12022), 'imageio.volread', 'volread', (['"""imageio:stent.npz"""'], {}), "('imageio:stent.npz')\n", (12001, 12022), False, 'from imageio import volread\n'), ((2191, 2207), 'itertools.product', 'product', (['*ranges'], {}), '(*ranges)\n', (2198, 2207), False, 'from itertools import product\n'), ((7395, 7444), ...
""" Data creation: Load the data, normalize it, and split into train and test. """ ''' Added the capability of loading pre-separated UCI train/test data function LoadData_Splitted_UCI ''' import numpy as np import os import pandas as pd import tensorflow as tf DATA_PATH = "../UCI_Datasets" class DataGenerator:...
[ "numpy.random.normal", "tensorflow.random.normal", "numpy.mean", "tensorflow.reduce_sum", "os.path.join", "numpy.random.seed", "numpy.std", "tensorflow.convert_to_tensor", "numpy.loadtxt", "numpy.load", "tensorflow.compat.v1.Session", "numpy.random.permutation" ]
[((714, 752), 'tensorflow.random.normal', 'tf.random.normal', ([], {'shape': '(Ntrain, Npar)'}), '(shape=(Ntrain, Npar))\n', (730, 752), True, 'import tensorflow as tf\n'), ((1174, 1220), 'tensorflow.convert_to_tensor', 'tf.convert_to_tensor', (['x_test'], {'dtype': 'tf.float32'}), '(x_test, dtype=tf.float32)\n', (1194...
from __future__ import print_function import emcee from multiprocessing import Pool import numpy as np import corner import matplotlib.pyplot as plt import sys import scipy.optimize as op from rbvfit.rb_vfit import rb_veldiff as rb_veldiff from rbvfit import rb_setline as rb import pdb def plot_model(wave_obs,fnorm,e...
[ "numpy.log", "emcee.EnsembleSampler", "numpy.array", "numpy.isfinite", "rbvfit.rb_vfit.rb_veldiff", "corner.corner", "numpy.diff", "numpy.concatenate", "numpy.round", "numpy.tile", "scipy.optimize.minimize", "IPython.display.Math", "numpy.shape", "numpy.random.randn", "matplotlib.pyplot....
[((1731, 1832), 'matplotlib.pyplot.subplots', 'plt.subplots', (['ntransition'], {'sharex': '(True)', 'sharey': '(False)', 'figsize': '(12, 18)', 'gridspec_kw': "{'hspace': 0}"}), "(ntransition, sharex=True, sharey=False, figsize=(12, 18),\n gridspec_kw={'hspace': 0})\n", (1743, 1832), True, 'import matplotlib.pyplot...
from numpy import logspace from sys import path as sysPath sysPath.append('../../src') #load the module from interfacePy import Cosmo cosmo=Cosmo('../../src/data/eos2020.dat',0,1e5) for T in logspace(-5,5,50): print( 'T=',T,'GeV\t', 'H=',cosmo.Hubble(T),'GeV\t', 'h_eff=',cosmo.heff(T),...
[ "matplotlib.pyplot.figure", "numpy.logspace", "sys.path.append", "interfacePy.Cosmo" ]
[((61, 88), 'sys.path.append', 'sysPath.append', (['"""../../src"""'], {}), "('../../src')\n", (75, 88), True, 'from sys import path as sysPath\n'), ((145, 193), 'interfacePy.Cosmo', 'Cosmo', (['"""../../src/data/eos2020.dat"""', '(0)', '(100000.0)'], {}), "('../../src/data/eos2020.dat', 0, 100000.0)\n", (150, 193), Fa...
import numpy as np from pyquil.gate_matrices import X, Y, Z, H from forest.benchmarking.operator_tools.superoperator_transformations import * # Test philosophy: # Using the by hand calculations found in the docs we check conversion # between one qubit channels with one Kraus operator (Hadamard) and two # Kraus operat...
[ "numpy.abs", "numpy.eye", "numpy.allclose", "numpy.sqrt", "numpy.random.rand", "numpy.asarray", "numpy.diag", "numpy.kron", "numpy.array", "numpy.zeros", "numpy.matmul" ]
[((3245, 3310), 'numpy.diag', 'np.diag', (['[1, -1, 1, -1, -1, 1, -1, 1, 1, -1, 1, -1, -1, 1, -1, 1]'], {}), '([1, -1, 1, -1, -1, 1, -1, 1, 1, -1, 1, -1, -1, 1, -1, 1])\n', (3252, 3310), True, 'import numpy as np\n'), ((3365, 3393), 'numpy.asarray', 'np.asarray', (['[[0, 0], [0, 1]]'], {}), '([[0, 0], [0, 1]])\n', (337...
import numpy as np import imageio from PoissonTemperature import FiniteDifferenceMatrixConstruction def ind_sub_conversion(img, ind2sub_fn, sub2ind_fn): rows, cols = img.shape[:2] num = rows*cols arange = np.arange(rows*cols, dtype=np.int32) ind2sub = np.empty((num, 2), dtype=np.int32) ind2sub[:, ...
[ "numpy.arange", "imageio.imwrite", "numpy.floor", "PoissonTemperature.FiniteDifferenceMatrixConstruction", "numpy.remainder", "numpy.empty", "imageio.imread", "numpy.save" ]
[((219, 257), 'numpy.arange', 'np.arange', (['(rows * cols)'], {'dtype': 'np.int32'}), '(rows * cols, dtype=np.int32)\n', (228, 257), True, 'import numpy as np\n'), ((270, 304), 'numpy.empty', 'np.empty', (['(num, 2)'], {'dtype': 'np.int32'}), '((num, 2), dtype=np.int32)\n', (278, 304), True, 'import numpy as np\n'), (...
import numpy as np import pandas as pd from sklearn.linear_model import LinearRegression def convert_to_sqft(str): tokens = str.split(' - ') if len(tokens) == 2: return (float(tokens[0]) + float(tokens[1])) / 2 try: return float(tokens[0]) except Exception: return np.NAN def co...
[ "pandas.get_dummies", "numpy.where", "sklearn.linear_model.LinearRegression", "pandas.read_csv" ]
[((441, 459), 'sklearn.linear_model.LinearRegression', 'LinearRegression', ([], {}), '()\n', (457, 459), False, 'from sklearn.linear_model import LinearRegression\n'), ((549, 590), 'pandas.read_csv', 'pd.read_csv', (['"""./Bengaluru_House_Data.csv"""'], {}), "('./Bengaluru_House_Data.csv')\n", (560, 590), True, 'import...
import numpy as np import numpy.testing as npt import slippy import slippy.core as core """ If you add a material you need to add the properties that it will be tested with to the material_parameters dict, the key should be the name of the class (what ever it is declared as after the class key word). The value should ...
[ "slippy.asnumpy", "slippy.core.Elastic", "numpy.random.rand", "numpy.random.seed" ]
[((2428, 2484), 'slippy.core.Elastic', 'core.Elastic', (['"""steel_6"""', "{'E': 200000000000.0, 'v': 0.3}"], {}), "('steel_6', {'E': 200000000000.0, 'v': 0.3})\n", (2440, 2484), True, 'import slippy.core as core\n'), ((2480, 2497), 'numpy.random.seed', 'np.random.seed', (['(0)'], {}), '(0)\n', (2494, 2497), True, 'imp...
# Copyright 2020-2021 OpenDR European Project # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agree...
[ "pyglet.gl.glGetDoublev", "numpy.asarray", "numpy.argsort", "numpy.sum", "numpy.zeros", "pyglet.gl.glGetIntegerv", "numpy.linalg.norm", "numpy.transpose", "pyglet.gl.GLdouble", "pyglet.gl.gluUnProject" ]
[((1131, 1191), 'pyglet.gl.glGetDoublev', 'pyglet.gl.glGetDoublev', (['pyglet.gl.GL_MODELVIEW_MATRIX', 'mvmat'], {}), '(pyglet.gl.GL_MODELVIEW_MATRIX, mvmat)\n', (1153, 1191), False, 'import pyglet\n'), ((1200, 1260), 'pyglet.gl.glGetDoublev', 'pyglet.gl.glGetDoublev', (['pyglet.gl.GL_PROJECTION_MATRIX', 'pmat'], {}), ...
from tensorflow.keras.models import Model import tensorflow as tf from tensorflow import keras import matplotlib.pyplot as plt import matplotlib.cm as cm import numpy as np import cv2 import numpy as np import pandas as pd from tensorflow.keras.models import load_model import tensorflow as tf import os #--------------...
[ "numpy.uint8", "os.path.join", "tensorflow.keras.preprocessing.image.array_to_img", "tensorflow.GradientTape", "tensorflow.squeeze", "tensorflow.math.reduce_max", "tensorflow.maximum", "tensorflow.reduce_mean", "tensorflow.keras.preprocessing.image.img_to_array", "tensorflow.cast", "matplotlib.c...
[((3903, 3940), 'tensorflow.reduce_mean', 'tf.reduce_mean', (['grads'], {'axis': '(0, 1, 2)'}), '(grads, axis=(0, 1, 2))\n', (3917, 3940), True, 'import tensorflow as tf\n'), ((4296, 4315), 'tensorflow.squeeze', 'tf.squeeze', (['heatmap'], {}), '(heatmap)\n', (4306, 4315), True, 'import tensorflow as tf\n'), ((4888, 49...
#!/usr/bin/env python3 # -*- coding: utf-8 -*- """ Common utility functions Created on Sun May 27 16:37:42 2018 @author: chen """ import math import cv2 import os from imutils import paths import numpy as np import scipy.ndimage def rotate_cooridinate(cooridinate_og,rotate_angle,rotate_center): """ calculat...
[ "numpy.sqrt", "math.cos", "numpy.array", "imutils.paths.list_images", "math.exp", "os.path.exists", "numpy.max", "numpy.exp", "numpy.concatenate", "numpy.min", "numpy.maximum", "numpy.round", "numpy.random.choice", "numpy.int", "cv2.imread", "numpy.minimum", "os.makedirs", "numpy.p...
[((774, 806), 'numpy.array', 'np.array', (['[rotated_x, rotated_y]'], {}), '([rotated_x, rotated_y])\n', (782, 806), True, 'import numpy as np\n'), ((988, 1008), 'os.path.exists', 'os.path.exists', (['path'], {}), '(path)\n', (1002, 1008), False, 'import os\n'), ((2068, 2209), 'numpy.array', 'np.array', (['[box[0][::-1...
from typing import Dict, Any, Optional, List import gym import numpy as np from collections import defaultdict from flatland.core.grid.grid4_utils import get_new_position from flatland.envs.agent_utils import EnvAgent, RailAgentStatus from flatland.envs.rail_env import RailEnv, RailEnvActions from envs.flatland.obse...
[ "gym.spaces.Discrete", "envs.flatland.observations.segment_graph.Graph.get_virtual_position", "gym.spaces.Box", "numpy.count_nonzero", "numpy.argmax", "collections.defaultdict", "envs.flatland.utils.gym_env.StepOutput", "flatland.utils.rendertools.RenderTool", "flatland.core.grid.grid4_utils.get_new...
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import numpy as np import cv2 as cv img = cv.imread('1.jpeg',cv.IMREAD_COLOR) #for polygon we need to have set of points so we create a numpy array. and pts is an object. pts = np.array([[20,33],[300,120], [67,79], [123,111], [144,134]], np.int32) #the method polylines will actully draws a polygon by taking differe...
[ "cv2.polylines", "cv2.imshow", "numpy.array", "cv2.destroyAllWindows", "cv2.waitKey", "cv2.imread" ]
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import scipy, numpy, typing, numbers from tequila.objective import Objective from tequila.objective.objective import assign_variable, Variable, format_variable_dictionary, format_variable_list from .optimizer_base import Optimizer from ._containers import _EvalContainer, _GradContainer, _HessContainer, _QngContainer fr...
[ "collections.namedtuple", "tequila.objective.objective.format_variable_dictionary", "tequila.tools.qng.get_qng_combos", "scipy.optimize.minimize", "numpy.array", "tequila.utils.exceptions.TequilaException", "tequila.objective.objective.assign_variable" ]
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# # This file is part of the chi repository # (https://github.com/DavAug/chi/) which is released under the # BSD 3-clause license. See accompanying LICENSE.md for copyright notice and # full license details. # import copy import myokit import myokit.formats.sbml as sbml import numpy as np class MechanisticModel(obj...
[ "numpy.alltrue", "myokit.formats.sbml.SBMLImporter", "myokit.pacing.blocktrain", "myokit.Simulation", "numpy.argsort", "numpy.array", "numpy.zeros", "numpy.sum", "numpy.empty", "copy.deepcopy", "copy.copy", "myokit.Name" ]
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import bpy import bmesh import numpy from random import randint import time # pointsToVoxels() has been modified from the function generate_blocks() in https://github.com/cagcoach/BlenderPlot/blob/master/blendplot.py # Some changes to accomodate Blender 2.8's API changes were made, # and the function has been made m...
[ "numpy.tile", "numpy.reshape", "numpy.unique", "bmesh.update_edit_mesh", "bpy.data.objects.new", "bpy.data.meshes.new", "bpy.context.collection.objects.link", "bmesh.new", "numpy.array", "time.time", "bpy.ops.mesh.primitive_cube_add" ]
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import unittest from hashlib import sha1 import pickle import numpy as np from datasketch.lsh import MinHashLSH from datasketch.minhash import MinHash from datasketch.weighted_minhash import WeightedMinHashGenerator class TestMinHashLSH(unittest.TestCase): def test_init(self): lsh = MinHashLSH(threshold=...
[ "datasketch.lsh.MinHashLSH", "datasketch.weighted_minhash.WeightedMinHashGenerator", "pickle.dumps", "datasketch.minhash.MinHash", "numpy.random.uniform", "unittest.main" ]
[((5700, 5715), 'unittest.main', 'unittest.main', ([], {}), '()\n', (5713, 5715), False, 'import unittest\n'), ((299, 324), 'datasketch.lsh.MinHashLSH', 'MinHashLSH', ([], {'threshold': '(0.8)'}), '(threshold=0.8)\n', (309, 324), False, 'from datasketch.lsh import MinHashLSH\n'), ((409, 454), 'datasketch.lsh.MinHashLSH...
import logging from typing import Callable from typing import List import numpy as np import torch.utils.data from .video_dataset import VideoDataset from .video_dataset import VideoRecord LOG = logging.getLogger(__name__) # line_profiler injects a "profile" into __builtins__. When not running under # line_profile...
[ "logging.getLogger", "numpy.zeros", "numpy.random.randint" ]
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# The MIT License (MIT) # # Copyright © 2021 <NAME>, <NAME>, <NAME> # # Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated # documentation files (the “Software”), to deal in the Software without restriction, including without limitation the # rights to use, copy...
[ "matplotlib.pyplot.grid", "numpy.linalg.pinv", "sklearn.linear_model.Lasso", "matplotlib.pyplot.ylabel", "matplotlib.pyplot.fill_between", "numpy.arange", "numpy.mean", "matplotlib.pyplot.xlabel", "matplotlib.pyplot.plot", "numpy.exp", "numpy.linspace", "numpy.matmul", "pandas.DataFrame", ...
[((1979, 2005), 'matplotlib.pyplot.figure', 'plt.figure', ([], {'figsize': '(8, 7)'}), '(figsize=(8, 7))\n', (1989, 2005), True, 'import matplotlib.pyplot as plt\n'), ((2500, 2516), 'matplotlib.pyplot.title', 'plt.title', (['title'], {}), '(title)\n', (2509, 2516), True, 'import matplotlib.pyplot as plt\n'), ((2521, 25...
import numpy as np import pandas as pd import os.path as path import abydos.distance as abd import abydos.phonetic as abp import pytest from scipy.sparse import csc_matrix from sklearn.feature_extraction.text import TfidfVectorizer import name_matching.name_matcher as nm @pytest.fixture def name_match(): package...
[ "abydos.distance.Overlap", "abydos.phonetic.RefinedSoundex", "numpy.array", "abydos.distance.Levenshtein", "abydos.distance.KuhnsIII", "abydos.distance.BaulieuXIII", "name_matching.name_matcher.NameMatcher", "pandas.testing.assert_frame_equal", "abydos.distance.WeightedJaccard", "abydos.phonetic.D...
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import numpy as np import math import ROOT import sys class DistrReader: def __init__(self, dataset): self.stat_error = 0 self.sys_error = 0 self.plambda = 0 self.dataset = str(dataset) self.hist = ROOT.TH1D('','', 100, -0.2, 0.2) self.distr = ROOT.TH1D('','', 64, 0,...
[ "numpy.sqrt", "ROOT.TH1D", "numpy.power", "ROOT.TMath.Log", "ROOT.TFile" ]
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# Copyright (c) Facebook, Inc. and its affiliates. # This source code is licensed under the MIT license found in the # LICENSE file in the root directory of this source tree. import torch from lottery.branch import base import models.registry from pruning.mask import Mask from pruning.pruned_model import PrunedModel...
[ "utils.tensor_utils.erank", "pruning.pruned_model.PrunedModel.to_mask_name", "matplotlib.use", "pruning.mask.Mask.load", "pruning.mask.Mask.ones_like", "os.path.join", "numpy.argmax", "seaborn.set_style", "pruning.mask.Mask", "seaborn.lineplot", "torch.svd", "copy.deepcopy", "platforms.platf...
[((689, 710), 'matplotlib.use', 'matplotlib.use', (['"""pdf"""'], {}), "('pdf')\n", (703, 710), False, 'import matplotlib\n'), ((909, 935), 'seaborn.set_style', 'sns.set_style', (['"""whitegrid"""'], {}), "('whitegrid')\n", (922, 935), True, 'import seaborn as sns\n'), ((1281, 1307), 'pruning.mask.Mask.load', 'Mask.loa...
""" ============== GLVQ Benchmark ============== This example shows the differences between the 4 different GLVQ implementations and LMNN. The Image Segmentation dataset is used for training and test. Each plot shows the projection and classification from each implementation. Because Glvq can't project the data on its ...
[ "sklearn_lvq.GmlvqModel", "sklearn_lvq.LgmlvqModel", "sklearn.decomposition.PCA", "numpy.asarray", "sklearn_lvq.utils._to_tango_colors", "numpy.array", "metric_learn.LMNN", "sklearn_lvq.utils._tango_color", "sklearn_lvq.GlvqModel", "matplotlib.pyplot.subplot", "sklearn_lvq.GrlvqModel", "matplo...
[((1441, 1471), 'numpy.asarray', 'np.asarray', (['x'], {'dtype': '"""float64"""'}), "(x, dtype='float64')\n", (1451, 1471), True, 'import numpy as np\n'), ((1476, 1489), 'numpy.asarray', 'np.asarray', (['y'], {}), '(y)\n', (1486, 1489), True, 'import numpy as np\n'), ((1498, 1525), 'metric_learn.LMNN', 'LMNN', ([], {'k...
import pytest import re import unittest import metric_learn import numpy as np from sklearn import clone from test.test_utils import ids_metric_learners, metric_learners, remove_y from metric_learn.sklearn_shims import set_random_state, SKLEARN_AT_LEAST_0_22 def remove_spaces(s): return re.sub(r'\s+', '', s) def ...
[ "metric_learn.SDML", "metric_learn.sklearn_shims.set_random_state", "numpy.array", "sklearn.clone", "numpy.sin", "unittest.main", "metric_learn.MMC", "metric_learn.MMC_Supervised", "metric_learn.MLKR", "metric_learn.NCA", "test.test_utils.remove_y", "metric_learn.SDML_Supervised", "metric_le...
[((7493, 7591), 'pytest.mark.parametrize', 'pytest.mark.parametrize', (['"""estimator, build_dataset"""', 'metric_learners'], {'ids': 'ids_metric_learners'}), "('estimator, build_dataset', metric_learners, ids=\n ids_metric_learners)\n", (7516, 7591), False, 'import pytest\n'), ((8409, 8507), 'pytest.mark.parametriz...
import numpy as np import pandas as pd import scipy as sc from scipy.stats import randint, norm, multivariate_normal, ortho_group from scipy import linalg from scipy.linalg import subspace_angles, orth from scipy.optimize import fmin import math from statistics import mean import seaborn as sns from sklearn.cluster imp...
[ "sklearn.cluster.KMeans", "statistics.mean", "numpy.trace", "scipy.optimize.bisect", "numpy.random.rand", "cluster.selfrepresentation.ElasticNetSubspaceClustering", "numpy.ones", "sklearn.decomposition.PCA", "math.degrees", "seaborn.heatmap", "numpy.array", "numpy.random.randint", "numpy.zer...
[((2804, 2824), 'sklearn.cluster.KMeans', 'KMeans', ([], {'n_clusters': 'k'}), '(n_clusters=k)\n', (2810, 2824), False, 'from sklearn.cluster import KMeans\n'), ((2842, 2857), 'pandas.DataFrame', 'pd.DataFrame', (['X'], {}), '(X)\n', (2854, 2857), True, 'import pandas as pd\n'), ((6547, 6561), 'pandas.DataFrame', 'pd.D...
# LinearRegression.py # March 2018 # # This script builds a Linear regression class to analyse data. # It supports a continuous response and several continuous features. # The class has a constructor building and fitting the model, and # a plotting method for residuals. # # Dependencies: # # Usage: # from pythia.Li...
[ "matplotlib.pyplot.ylabel", "numpy.polyfit", "numpy.array", "numpy.poly1d", "matplotlib.pyplot.xlabel", "matplotlib.pyplot.plot", "numpy.asarray", "matplotlib.pyplot.axhline", "numpy.dot", "matplotlib.pyplot.scatter", "numpy.abs", "numpy.ones", "matplotlib.use", "matplotlib.pyplot.title", ...
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#!python3 # # Copyright (C) 2014-2015 <NAME>. All rights reserved. # Use of this source code is governed by a BSD-style # license that can be found in the LICENSE file. """ PYPOWER-Dynamics Functions for standard blocks (solves a step) """ import numpy as np # Gain block # yo = p * yi # p is a scalar gain coefficie...
[ "numpy.prod" ]
[((1560, 1571), 'numpy.prod', 'np.prod', (['yi'], {}), '(yi)\n', (1567, 1571), True, 'import numpy as np\n')]
# -*- coding: utf-8 -*- """Supports F10.7 index values. Downloads data from LASP and the SWPC. Properties ---------- platform 'sw' name 'f107' tag - 'historic' LASP F10.7 data (downloads by month, loads by day) - 'prelim' Preliminary SWPC daily solar indices - 'daily' Daily SWPC solar indices (cont...
[ "pysat.Files.from_os", "datetime.timedelta", "pysatSpaceWeather.instruments.methods.f107.rewrite_daily_file", "pandas.date_range", "os.remove", "datetime.datetime", "ftplib.FTP", "numpy.where", "pandas.DataFrame.from_dict", "os.path.split", "pandas.DataFrame", "sys.stdout.flush", "json.loads...
[((3004, 3024), 'datetime.datetime.utcnow', 'dt.datetime.utcnow', ([], {}), '()\n', (3022, 3024), True, 'import datetime as dt\n'), ((3033, 3074), 'datetime.datetime', 'dt.datetime', (['now.year', 'now.month', 'now.day'], {}), '(now.year, now.month, now.day)\n', (3044, 3074), True, 'import datetime as dt\n'), ((3178, 3...
#!/usr/bin/env python3 # -*- coding: utf-8 -*- """Usage: %(scriptName) <bug_report_file> <data_prefix> """ import json from timeit import default_timer import datetime import numpy as np import pickle import sys from multiprocessing import Pool from operator import itemgetter from scipy import sparse from sklearn.fe...
[ "sklearn.feature_extraction.text.TfidfTransformer", "unqlite.UnQLite", "timeit.default_timer", "scipy.sparse.load_npz", "tqdm.tqdm", "operator.itemgetter", "json.load", "numpy.sum", "datetime.datetime.now", "numpy.zeros", "multiprocessing.Pool", "pickle.loads", "scipy.sparse.save_npz", "sc...
[((543, 558), 'timeit.default_timer', 'default_timer', ([], {}), '()\n', (556, 558), False, 'from timeit import default_timer\n'), ((846, 861), 'timeit.default_timer', 'default_timer', ([], {}), '()\n', (859, 861), False, 'from timeit import default_timer\n'), ((2114, 2147), 'pickle.loads', 'pickle.loads', (['types[var...
import PIL import numpy as np def to_grayscale(img): return np.dot(img, [0.299, 0.587, 0.144]) def zero_center(img): return img - 127.0 def crop(img, bottom=12, left=6, right=6): height, width = img.shape return img[0: height - bottom, left: width - right] def save(img, path): pil_img = PIL....
[ "numpy.dot", "PIL.Image.fromarray" ]
[((66, 100), 'numpy.dot', 'np.dot', (['img', '[0.299, 0.587, 0.144]'], {}), '(img, [0.299, 0.587, 0.144])\n', (72, 100), True, 'import numpy as np\n'), ((316, 340), 'PIL.Image.fromarray', 'PIL.Image.fromarray', (['img'], {}), '(img)\n', (335, 340), False, 'import PIL\n')]
""" S3AIO Class Array access to a single S3 object """ from __future__ import absolute_import import SharedArray as sa import zstd from itertools import repeat, product import numpy as np from pathos.multiprocessing import ProcessingPool from six.moves import zip try: from StringIO import StringIO except Impor...
[ "SharedArray.create", "numpy.ravel_multi_index", "itertools.product", "zstd.ZstdDecompressor", "SharedArray.delete", "numpy.empty", "numpy.unravel_index", "numpy.frombuffer", "numpy.dtype", "SharedArray.attach", "six.moves.zip", "pathos.multiprocessing.ProcessingPool", "itertools.repeat" ]
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