code
stringlengths
31
1.05M
apis
list
extract_api
stringlengths
97
1.91M
from rsqsim_api.fault.multifault import RsqSimMultiFault, RsqSimSegment import multiprocessing as mp from typing import Union import h5py import netCDF4 as nc import numpy as np import random sentinel = None def multiprocess_gf_to_hdf(fault: Union[RsqSimSegment, RsqSimMultiFault], x_range: np.ndarray, y_range: np.nda...
[ "random.shuffle", "multiprocessing.Process", "netCDF4.Dataset", "multiprocessing.cpu_count", "h5py.File", "numpy.array", "numpy.zeros", "numpy.meshgrid", "multiprocessing.Queue" ]
[((2635, 2681), 'random.shuffle', 'random.shuffle', (['all_patches_with_write_indices'], {}), '(all_patches_with_write_indices)\n', (2649, 2681), False, 'import random\n'), ((3354, 3364), 'multiprocessing.Queue', 'mp.Queue', ([], {}), '()\n', (3362, 3364), True, 'import multiprocessing as mp\n'), ((4152, 4179), 'h5py.F...
import numpy as np import pandas as pd import pytest import tabmat as tm @pytest.fixture() def X(): df = pd.read_pickle("tests/real_matrix.pkl") X_split = tm.from_pandas(df, np.float64) wts = np.ones(df.shape[0]) / df.shape[0] X_std = X_split.standardize(wts, True, True)[0] return X_std def tes...
[ "pandas.read_pickle", "numpy.random.rand", "numpy.ones", "numpy.testing.assert_almost_equal", "tabmat.from_pandas", "pytest.fixture", "numpy.arange" ]
[((77, 93), 'pytest.fixture', 'pytest.fixture', ([], {}), '()\n', (91, 93), False, 'import pytest\n'), ((112, 151), 'pandas.read_pickle', 'pd.read_pickle', (['"""tests/real_matrix.pkl"""'], {}), "('tests/real_matrix.pkl')\n", (126, 151), True, 'import pandas as pd\n'), ((166, 196), 'tabmat.from_pandas', 'tm.from_pandas...
import gym import gym.spaces import json import numpy as np import os import socket gym_version = tuple(int(x) for x in gym.__version__.split('.')) class Channel: def __init__(self): self.sock = None self.dirty = False self._value = None self.annotations = {} def set_socket(s...
[ "numpy.copyto", "socket.socket", "gym.spaces.MultiDiscrete", "numpy.memmap", "os.path.join", "json.dumps", "gym.spaces.Box", "numpy.array", "numpy.dot", "gym_remote.exceptions.make", "gym.__version__.split", "numpy.full", "numpy.dtype" ]
[((2072, 2098), 'numpy.array', 'np.array', (['folds'], {'dtype': 'int'}), '(folds, dtype=int)\n', (2080, 2098), True, 'import numpy as np\n'), ((2210, 2249), 'numpy.dot', 'np.dot', (['self.folds', '(value % self.ranges)'], {}), '(self.folds, value % self.ranges)\n', (2216, 2249), True, 'import numpy as np\n'), ((2886, ...
from __future__ import print_function # Copyright (c) 2015-2016, Danish Geodata Agency <<EMAIL>> # Copyright (c) 2016, Danish Agency for Data Supply and Efficiency <<EMAIL>> # # Permission to use, copy, modify, and/or distribute this software for any # purpose with or without fee is hereby granted, provided that t...
[ "os.path.exists", "osgeo.gdal.AllRegister", "numpy.loadtxt", "numpy.load", "osgeo.gdal.GetDriverByName" ]
[((1056, 1074), 'osgeo.gdal.AllRegister', 'gdal.AllRegister', ([], {}), '()\n', (1072, 1074), False, 'from osgeo import gdal\n'), ((1084, 1113), 'osgeo.gdal.GetDriverByName', 'gdal.GetDriverByName', (['"""GTiff"""'], {}), "('GTiff')\n", (1104, 1113), False, 'from osgeo import gdal\n'), ((1119, 1140), 'os.path.exists', ...
""" =========================== Plotting feature importance =========================== A simple example showing how to compute and display feature importances, it is also compared with the feature importances obtained using random forests. Feature importance is a measure of the effect of the features on the outputs....
[ "sklearn.ensemble.RandomForestRegressor", "pyearth.Earth", "matplotlib.pyplot.ylabel", "matplotlib.pyplot.figure", "numpy.random.seed", "numpy.random.uniform", "numpy.sin", "matplotlib.pyplot.title", "matplotlib.pyplot.subplot", "matplotlib.pyplot.show" ]
[((793, 813), 'numpy.random.seed', 'numpy.random.seed', (['(2)'], {}), '(2)\n', (810, 813), False, 'import numpy\n'), ((836, 869), 'numpy.random.uniform', 'numpy.random.uniform', ([], {'size': '(m, n)'}), '(size=(m, n))\n', (856, 869), False, 'import numpy\n'), ((1093, 1197), 'pyearth.Earth', 'Earth', ([], {'max_degree...
#!/usr/bin/env python """ Displaying large NumPy arrays with TabularEditor A demonstration of how the TabularEditor can be used to display (large) NumPy arrays, in this case 100,000 random 3D points from a unit cube. In addition to showing the coordinates of each point, it also displays the index of each point in th...
[ "numpy.random.random", "numpy.sqrt" ]
[((1767, 1786), 'numpy.random.random', 'random', (['(100000, 3)'], {}), '((100000, 3))\n', (1773, 1786), False, 'from numpy.random import random\n'), ((1206, 1260), 'numpy.sqrt', 'sqrt', (['((x - 0.5) ** 2 + (y - 0.5) ** 2 + (z - 0.5) ** 2)'], {}), '((x - 0.5) ** 2 + (y - 0.5) ** 2 + (z - 0.5) ** 2)\n', (1210, 1260), F...
#========= import time import numpy as np import matplotlib.pyplot as plt from moviepy.editor import VideoClip from moviepy.video.io.bindings import mplfig_to_npimage fps = 2 f_dt = 1/fps fig, ax = plt.subplots( figsize=(6,6), facecolor=[1,1,1] ) x = np.arange(0, 2*np.pi, 0.01) line, = ax.plot(x, np.sin(x), lw=3...
[ "moviepy.video.io.bindings.mplfig_to_npimage", "moviepy.editor.VideoClip", "numpy.sin", "time.time", "matplotlib.pyplot.subplots", "numpy.arange" ]
[((205, 254), 'matplotlib.pyplot.subplots', 'plt.subplots', ([], {'figsize': '(6, 6)', 'facecolor': '[1, 1, 1]'}), '(figsize=(6, 6), facecolor=[1, 1, 1])\n', (217, 254), True, 'import matplotlib.pyplot as plt\n'), ((258, 287), 'numpy.arange', 'np.arange', (['(0)', '(2 * np.pi)', '(0.01)'], {}), '(0, 2 * np.pi, 0.01)\n'...
import cPickle as pickle from shapely.geometry import Point, Polygon import numpy as np from netCDF4 import Dataset from scipy.interpolate import griddata p_lev = 925 geopotential, longitude_dom, latitude_dom, time_dom, time_hour = pickle.load\ (open('/nfs/a90/eepdw/D...
[ "numpy.unique", "numpy.where", "netCDF4.Dataset", "shapely.geometry.Polygon", "numpy.min", "numpy.meshgrid" ]
[((558, 670), 'shapely.geometry.Polygon', 'Polygon', (['((73.0, 21.0), (83.0, 16.0), (87.0, 22.0), (90.0, 22.0), (90.0, 23.8), (\n 83.0, 24.2), (76.3, 28.0))'], {}), '(((73.0, 21.0), (83.0, 16.0), (87.0, 22.0), (90.0, 22.0), (90.0, \n 23.8), (83.0, 24.2), (76.3, 28.0)))\n', (565, 670), False, 'from shapely.geomet...
# -*- coding: utf-8 -*- import wx import ui import numpy as np class wxFrame(wx.Frame): def __init__(self): wx.Frame.__init__(self,parent=None,title="ABC",size=(600,450)) self.init_ctrls() self.SetBackgroundColour("#E5E5E5") self.Show() def init_ctrls(self): sel...
[ "wx.Button", "wx.BoxSizer", "numpy.column_stack", "wx.StaticBoxSizer", "wx.StaticText", "wx.TextCtrl", "numpy.array", "ui.DataGrid", "wx.Frame.__init__", "wx.StaticBox", "wx.App" ]
[((2923, 2931), 'wx.App', 'wx.App', ([], {}), '()\n', (2929, 2931), False, 'import wx\n'), ((121, 187), 'wx.Frame.__init__', 'wx.Frame.__init__', (['self'], {'parent': 'None', 'title': '"""ABC"""', 'size': '(600, 450)'}), "(self, parent=None, title='ABC', size=(600, 450))\n", (138, 187), False, 'import wx\n'), ((328, 3...
"""Parse different types of camera streams. This module is used to parse different types of camera streams. The module provides the StreamParser base class which provides a uniform way of parsing all camera streams. The module provides different subclasses, each for a different type of camera streams (e.g. image strea...
[ "urllib2.urlopen", "numpy.fromstring" ]
[((4874, 4910), 'numpy.fromstring', 'np.fromstring', (['frame'], {'dtype': 'np.uint8'}), '(frame, dtype=np.uint8)\n', (4887, 4910), True, 'import numpy as np\n'), ((5952, 6003), 'urllib2.urlopen', 'urllib2.urlopen', (['self.url'], {'timeout': 'DOWNLOAD_TIMEOUT'}), '(self.url, timeout=DOWNLOAD_TIMEOUT)\n', (5967, 6003),...
# Copyright 2020 Forschungszentrum Jülich GmbH and Aix-Marseille Université # "Licensed to the Apache Software Foundation (ASF) under one or more contributor license agreements; and to You under the Apache License, Version 2.0. " import tvb.simulator.lab as lab from nest_elephant_tvb.Tvb.modify_tvb import Interface_c...
[ "numpy.random.rand", "tvb.simulator.lab.simulator.Simulator", "numpy.array", "tvb.simulator.lab.connectivity.Connectivity", "numpy.sum", "numpy.empty", "numpy.random.seed", "numpy.concatenate", "numpy.isnan", "numpy.arange" ]
[((376, 394), 'numpy.random.seed', 'np.random.seed', (['(42)'], {}), '(42)\n', (390, 394), True, 'import numpy as np\n'), ((536, 551), 'numpy.array', 'np.array', (['[4.0]'], {}), '([4.0])\n', (544, 551), True, 'import numpy as np\n'), ((946, 1078), 'tvb.simulator.lab.simulator.Simulator', 'lab.simulator.Simulator', ([]...
from keras.layers import Flatten, Input from keras.layers import AveragePooling3D, MaxPooling3D from keras.models import Model from keras import backend as K import numpy as np import pandas as pd from sklearn.externals import joblib def generate_spatial_agg_features(X, input_shape=(11, 11, 11, 256)): img_inp...
[ "keras.backend.set_image_data_format", "numpy.dstack", "keras.layers.Flatten", "pandas.read_csv", "numpy.rollaxis", "keras.layers.Input", "keras.models.Model", "sklearn.externals.joblib.dump", "keras.layers.MaxPooling3D" ]
[((666, 706), 'keras.backend.set_image_data_format', 'K.set_image_data_format', (['"""channels_last"""'], {}), "('channels_last')\n", (689, 706), True, 'from keras import backend as K\n'), ((719, 756), 'pandas.read_csv', 'pd.read_csv', (['"""data/stage1_labels.csv"""'], {}), "('data/stage1_labels.csv')\n", (730, 756), ...
import argparse import os from functools import partial from multiprocessing.pool import Pool os.environ["MKL_NUM_THREADS"] = "1" os.environ["NUMEXPR_NUM_THREADS"] = "1" os.environ["OMP_NUM_THREADS"] = "1" from tqdm import tqdm import cv2 cv2.ocl.setUseOpenCL(False) cv2.setNumThreads(0) from preprocessing.utils ...
[ "cv2.ocl.setUseOpenCL", "os.path.exists", "PIL.Image.fromarray", "cv2.setNumThreads", "os.makedirs", "argparse.ArgumentParser", "facenet_pytorch.models.mtcnn.MTCNN", "os.path.join", "functools.partial", "numpy.around", "os.cpu_count", "preprocessing.utils.get_original_video_paths", "cv2.imre...
[((246, 273), 'cv2.ocl.setUseOpenCL', 'cv2.ocl.setUseOpenCL', (['(False)'], {}), '(False)\n', (266, 273), False, 'import cv2\n'), ((274, 294), 'cv2.setNumThreads', 'cv2.setNumThreads', (['(0)'], {}), '(0)\n', (291, 294), False, 'import cv2\n'), ((453, 513), 'facenet_pytorch.models.mtcnn.MTCNN', 'MTCNN', ([], {'margin':...
# # Copyright 2013 Quantopian, Inc. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in wr...
[ "datetime.datetime", "zipline.finance.risk.RiskMetricsPeriod", "zipline.utils.factory.create_returns_from_list", "zipline.utils.factory.create_returns_from_range", "zipline.finance.risk.RiskReport", "zipline.finance.trading.TradingEnvironment", "numpy.testing.assert_almost_equal", "calendar.isleap", ...
[((1082, 1102), 'zipline.finance.trading.TradingEnvironment', 'TradingEnvironment', ([], {}), '()\n', (1100, 1102), False, 'from zipline.finance.trading import SimulationParameters, TradingEnvironment\n'), ((1213, 1292), 'datetime.datetime', 'datetime.datetime', ([], {'year': '(2006)', 'month': '(1)', 'day': '(1)', 'ho...
import sys import numpy import helper import bayesianClusterEvaluationLaplacian import experiments import baselineMultiLogReg import pickle import syntheticDataGeneration import sklearn.metrics import constants def getANMI(allResults, criteriaID): bestId = numpy.argmax(allResults[:, criteriaID]) return allRes...
[ "helper.getClusterIds", "numpy.asarray", "numpy.argmax", "pickle.load", "numpy.argsort", "syntheticDataGeneration.generateData", "numpy.zeros", "helper.showAvgAndStd", "numpy.load" ]
[((263, 302), 'numpy.argmax', 'numpy.argmax', (['allResults[:, criteriaID]'], {}), '(allResults[:, criteriaID])\n', (275, 302), False, 'import numpy\n'), ((447, 488), 'numpy.argsort', 'numpy.argsort', (['(-allResults[:, criteriaID])'], {}), '(-allResults[:, criteriaID])\n', (460, 488), False, 'import numpy\n'), ((1035,...
# Authors: # <NAME> <<EMAIL>> # <NAME> <<EMAIL>> # # License: BSD 3 clause """ Base element """ # pylint: disable=invalid-name import logging from abc import ABC, abstractmethod from six.moves import range import numpy as np from .utils import distance_lines, distance_ellipse __all__ = ['Element', 'BaseCir...
[ "logging.getLogger", "numpy.allclose", "six.moves.range", "numpy.ones", "numpy.logical_and", "numpy.asarray", "numpy.min", "numpy.max", "numpy.inner", "numpy.zeros", "numpy.linspace", "numpy.cos", "numpy.linalg.norm", "numpy.sin" ]
[((396, 423), 'logging.getLogger', 'logging.getLogger', (['__name__'], {}), '(__name__)\n', (413, 423), False, 'import logging\n'), ((1546, 1556), 'numpy.ones', 'np.ones', (['(2)'], {}), '(2)\n', (1553, 1556), True, 'import numpy as np\n'), ((2681, 2699), 'numpy.asarray', 'np.asarray', (['center'], {}), '(center)\n', (...
# importing libraries import pandas as pd import numpy as np import matplotlib.pyplot as plt import matplotlib matplotlib.rcParams["figure.figsize"] = (20,10) # importing the dataset dataset = pd.read_csv(r"C:\00git\Bangalore-Real-Estate-Price-Prediction-WebApp-master\dataset\Bengaluru_House_Data.csv") print(dataset.h...
[ "sklearn.model_selection.GridSearchCV", "matplotlib.pyplot.hist", "sklearn.tree.DecisionTreeRegressor", "pandas.read_csv", "matplotlib.pyplot.ylabel", "sklearn.linear_model.Lasso", "numpy.array", "numpy.mean", "numpy.where", "matplotlib.pyplot.xlabel", "json.dumps", "sklearn.model_selection.Sh...
[((194, 317), 'pandas.read_csv', 'pd.read_csv', (['"""C:\\\\00git\\\\Bangalore-Real-Estate-Price-Prediction-WebApp-master\\\\dataset\\\\Bengaluru_House_Data.csv"""'], {}), "(\n 'C:\\\\00git\\\\Bangalore-Real-Estate-Price-Prediction-WebApp-master\\\\dataset\\\\Bengaluru_House_Data.csv'\n )\n", (205, 317), True, 'i...
import numpy as np import pandas as pd class CellDischargeData: """ Battery cell data from discharge test. """ def __init__(self, path): """ Initialize with path to discharge data file. Parameters ---------- path : str Path to discharge data file. ...
[ "numpy.where", "pandas.read_csv" ]
[((717, 734), 'pandas.read_csv', 'pd.read_csv', (['path'], {}), '(path)\n', (728, 734), True, 'import pandas as pd\n'), ((1270, 1296), 'numpy.where', 'np.where', (["(self.data == 'S')"], {}), "(self.data == 'S')\n", (1278, 1296), True, 'import numpy as np\n')]
import pandas as pd import numpy as np from sklearn.feature_extraction.text import TfidfVectorizer from sklearn.preprocessing import LabelEncoder from sklearn.model_selection import train_test_split from sklearn.feature_selection import SelectFromModel from sklearn.naive_bayes import MultinomialNB from sklearn.linear_m...
[ "sklearn.preprocessing.LabelEncoder", "pandas.read_csv", "sklearn.model_selection.train_test_split", "sklearn.ensemble.RandomForestClassifier", "sklearn.linear_model.LogisticRegression", "numpy.array", "sklearn.feature_extraction.text.TfidfVectorizer", "sklearn.naive_bayes.MultinomialNB" ]
[((446, 479), 'pandas.read_csv', 'pd.read_csv', (['"""airline_tweets.csv"""'], {}), "('airline_tweets.csv')\n", (457, 479), True, 'import pandas as pd\n'), ((1198, 1212), 'sklearn.preprocessing.LabelEncoder', 'LabelEncoder', ([], {}), '()\n', (1210, 1212), False, 'from sklearn.preprocessing import LabelEncoder\n'), ((1...
import numpy as np import matplotlib.pylab as plt from .bipolar import bipolar from matplotlib.colors import LinearSegmentedColormap # get colormap ncolors = 256 color_array = plt.get_cmap('jet')(range(ncolors)) # change alpha values color_array[:,-1] = np.linspace(0.0, 1.0,ncolors) # create a colormap object map_ob...
[ "numpy.abs", "matplotlib.pylab.subplots", "matplotlib.pylab.savefig", "matplotlib.pylab.tight_layout", "matplotlib.pylab.colorbar", "numpy.real", "numpy.linspace", "matplotlib.pylab.register_cmap", "matplotlib.pylab.show", "matplotlib.pylab.close", "matplotlib.pylab.get_cmap", "matplotlib.colo...
[((256, 286), 'numpy.linspace', 'np.linspace', (['(0.0)', '(1.0)', 'ncolors'], {}), '(0.0, 1.0, ncolors)\n', (267, 286), True, 'import numpy as np\n'), ((327, 398), 'matplotlib.colors.LinearSegmentedColormap.from_list', 'LinearSegmentedColormap.from_list', ([], {'name': '"""jet_alpha"""', 'colors': 'color_array'}), "(n...
import time import numpy as np import scanpy as sc from datetime import timedelta, datetime def record_time(start_time, end_time, step_name, fp): fp.write("{step} starts at: {time}\n".format(step = step_name, time = datetime.fromtimestamp(start_time))) fp.write("{step} ends at: {time}\n".format(step = step_nam...
[ "scanpy.pp.normalize_total", "datetime.datetime.fromtimestamp", "scanpy.pp.highly_variable_genes", "scanpy.tl.pca", "scanpy.read_10x_h5", "scanpy.pp.scale", "scanpy.pp.log1p", "scanpy.pp.filter_cells", "scanpy.pp.filter_genes", "scanpy.tl.louvain", "scanpy.pp.neighbors", "scanpy.tl.umap", "n...
[((673, 684), 'time.time', 'time.time', ([], {}), '()\n', (682, 684), False, 'import time\n'), ((693, 734), 'scanpy.read_10x_h5', 'sc.read_10x_h5', (['src_data'], {'genome': '"""GRCh38"""'}), "(src_data, genome='GRCh38')\n", (707, 734), True, 'import scanpy as sc\n'), ((855, 866), 'time.time', 'time.time', ([], {}), '(...
from __future__ import print_function from __future__ import absolute_import from __future__ import division from past.builtins import basestring from moby2.libactpol import freq_space_waterfall from moby2.libactpol import time_space_waterfall from moby2.scripting import products import numpy try: import pylab ex...
[ "pylab.title", "numpy.log10", "numpy.hstack", "matplotlib.colorbar.ColorbarBase", "pylab.savefig", "pylab.xlabel", "numpy.log", "numpy.argsort", "numpy.array", "moby2.pointing.get_coords", "matplotlib.pyplot.subplot2grid", "pylab.gca", "numpy.mod", "numpy.arange", "numpy.mean", "pylab....
[((537, 568), 'moby2.pointing.set_bulletin_A', 'moby2.pointing.set_bulletin_A', ([], {}), '()\n', (566, 568), False, 'import moby2\n'), ((737, 771), 'numpy.ones', 'numpy.ones', (['tod.nsamps'], {'dtype': 'bool'}), '(tod.nsamps, dtype=bool)\n', (747, 771), False, 'import numpy\n'), ((873, 931), 'pylab.plot', 'pylab.plot...
# -*- coding: utf-8 -*- import click import logging from pathlib import Path import os from dotenv import find_dotenv, load_dotenv import json import pandas as pd import numpy as np import urllib import zipfile from tqdm import tqdm from glob import glob from collections import defaultdict from src.data.tcia import TCI...
[ "logging.getLogger", "pandas.read_csv", "zipfile.ZipFile", "os.remove", "os.path.exists", "os.listdir", "click.IntRange", "pathlib.Path", "pandas.DataFrame.from_dict", "os.path.isdir", "numpy.random.seed", "click.command", "click.argument", "dotenv.find_dotenv", "src.data.tcia.TCIAClient...
[((552, 567), 'click.command', 'click.command', ([], {}), '()\n', (565, 567), False, 'import click\n'), ((622, 730), 'click.argument', 'click.argument', (['"""collection_reference_filename"""'], {'type': 'click.STRING', 'default': '"""collection_files_list.csv"""'}), "('collection_reference_filename', type=click.STRING...
import numpy as np import pandas as pd import re from joblib import dump, load from rdflib import Graph, Literal, RDF, URIRef, Namespace import pathlib def get_dir(path=''): """Return the full path to the provided files in the OpenPredict data folder Where models and features for runs are stored """ re...
[ "numpy.array", "numpy.multiply", "pathlib.Path", "re.search" ]
[((1865, 1901), 're.search', 're.search', (['"""(.*?):(.*)"""', 'input_curie'], {}), "('(.*?):(.*)', input_curie)\n", (1874, 1901), False, 'import re\n'), ((4525, 4542), 'numpy.array', 'np.array', (['classes'], {}), '(classes)\n', (4533, 4542), True, 'import numpy as np\n'), ((4555, 4570), 'numpy.array', 'np.array', ([...
# -*- coding: utf-8 -*- """ computeKey computes the musical key of an input audio file Args: afAudioData: array with floating point audio data. f_s: sample rate afWindow: FFT window of length iBlockLength (default: hann) iBlockLength: internal block length (default: 4096 samples) iHopLe...
[ "numpy.abs", "numpy.sqrt", "numpy.roll", "argparse.ArgumentParser", "scipy.signal.spectrogram", "ToolComputeHann.ToolComputeHann", "numpy.array", "numpy.zeros", "numpy.concatenate", "FeatureSpectralPitchChroma.FeatureSpectralPitchChroma", "ToolReadAudio.ToolReadAudio" ]
[((911, 1159), 'numpy.array', 'np.array', (["['C Maj', 'C# Maj', 'D Maj', 'D# Maj', 'E Maj', 'F Maj', 'F# Maj', 'G Maj',\n 'G# Maj', 'A Maj', 'A# Maj', 'B Maj', 'c min', 'c# min', 'd min',\n 'd# min', 'e min', 'f min', 'f# min', 'g min', 'g# min', 'a min',\n 'a# min', 'b min']"], {}), "(['C Maj', 'C# Maj', 'D ...
# Copyright 2018 Google LLC # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # https://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, ...
[ "numpy.random.random", "moonlight.glyphs.testing.DummyGlyphClassifier", "numpy.asarray", "absl.testing.absltest.main", "moonlight.protobuf.musicscore_pb2.Staff", "numpy.random.randint", "moonlight.structure.create_structure", "copy.deepcopy", "moonlight.engine.OMREngine" ]
[((3565, 3580), 'absl.testing.absltest.main', 'absltest.main', ([], {}), '()\n', (3578, 3580), False, 'from absl.testing import absltest\n'), ((1251, 1281), 'numpy.random.random', 'np.random.random', (['(2, 3, 5, 6)'], {}), '((2, 3, 5, 6))\n', (1267, 1281), True, 'import numpy as np\n'), ((1299, 1362), 'moonlight.glyph...
# Licensed under a 3-clause BSD style license - see LICENSE.rst """ Tests for the photometry module. """ import pytest import numpy as np from numpy.testing import (assert_allclose, assert_array_equal, assert_array_less) from astropy.coordinates import SkyCoord from astropy.io import fits f...
[ "numpy.sqrt", "numpy.array", "astropy.io.fits.open", "astropy.nddata.NDData", "numpy.arange", "numpy.testing.assert_array_less", "numpy.testing.assert_allclose", "astropy.nddata.StdDevUncertainty", "pytest.mark.skipif", "numpy.testing.assert_array_equal", "numpy.ones", "pytest.warns", "numpy...
[((1661, 1730), 'pytest.mark.parametrize', 'pytest.mark.parametrize', (["('aperture_class', 'params')", 'TEST_APERTURES'], {}), "(('aperture_class', 'params'), TEST_APERTURES)\n", (1684, 1730), False, 'import pytest\n'), ((2012, 2081), 'pytest.mark.parametrize', 'pytest.mark.parametrize', (["('aperture_class', 'params'...
from solver import * from armatures import * from models import * import numpy as np import config np.random.seed(20160923) pose_glb = np.zeros([1, 3]) # global rotation ########################## mano settings ######################### n_pose = 12 # number of pose pca coefficients, in mano the maximum is 45 n_shap...
[ "numpy.random.normal", "numpy.zeros", "numpy.random.seed" ]
[((101, 125), 'numpy.random.seed', 'np.random.seed', (['(20160923)'], {}), '(20160923)\n', (115, 125), True, 'import numpy as np\n'), ((137, 153), 'numpy.zeros', 'np.zeros', (['[1, 3]'], {}), '([1, 3])\n', (145, 153), True, 'import numpy as np\n'), ((373, 402), 'numpy.random.normal', 'np.random.normal', ([], {'size': '...
# A sample spatial model with agents eating grass off patches. # No visualization as of yet #=============== # SETUP #=============== from helipad import Helipad heli = Helipad() heli.name = 'Grass Eating' heli.order = 'random' heli.stages = 5 heli.addParameter('energy', 'Energy from grass', 'slider', dflt=2, opts=...
[ "numpy.mean", "helipad.Helipad", "random.randint", "random.choice" ]
[((172, 181), 'helipad.Helipad', 'Helipad', ([], {}), '()\n', (179, 181), False, 'from helipad import Helipad\n'), ((3782, 3802), 'numpy.mean', 'mean', (['model.deathAge'], {}), '(model.deathAge)\n', (3786, 3802), False, 'from numpy import mean\n'), ((1834, 1851), 'random.choice', 'choice', (['prospects'], {}), '(prosp...
#================================ # RESEARCH GROUP PROJECT [RGP] #================================ # This file is part of the COMP3096 Research Group Project. # System import logging # Gym Imports import gym from gym.spaces import Box, Discrete, Tuple # PySC2 Imports from pysc2.lib.actions import FUNCTIONS, Function...
[ "logging.getLogger", "gym.spaces.Discrete", "gym.spaces.Box", "pysc2.lib.actions.FUNCTIONS.move_unit", "numpy.unravel_index", "pysc2.lib.actions.FUNCTIONS.no_op" ]
[((504, 531), 'logging.getLogger', 'logging.getLogger', (['__name__'], {}), '(__name__)\n', (521, 531), False, 'import logging\n'), ((1190, 1281), 'gym.spaces.Box', 'Box', ([], {'low': '(0)', 'high': 'SCREEN_FEATURES.player_relative.scale', 'shape': 'screen_shape_observation'}), '(low=0, high=SCREEN_FEATURES.player_rel...
import pandas as pd import numpy as np import math import tkinter as tk from tkinter import ttk from PIL import Image, ImageTk import os import sqlite3 from sqlite3 import OperationalError #file = str(os.path.realpath(__file__)) csv_file = "/Users/nedimdrekovic/Python/DB/simplemaps_worldcities/" + "world_cities.csv" s...
[ "numpy.sqrt", "sqlite3.connect", "tkinter.ttk.Button", "tkinter.Tk", "numpy.cos", "tkinter.Label", "numpy.sin" ]
[((4251, 4287), 'sqlite3.connect', 'sqlite3.connect', (['db_file'], {'timeout': '(10)'}), '(db_file, timeout=10)\n', (4266, 4287), False, 'import sqlite3\n'), ((5661, 5700), 'tkinter.Tk', 'tk.Tk', ([], {'className': '"""AutocompleteCombobox"""'}), "(className='AutocompleteCombobox')\n", (5666, 5700), True, 'import tkin...
import os from os import listdir from os.path import isfile, join import logging import numpy as np from ase import Atoms import mff from mff import models, calculators, utility from mff import configurations as cfg def get_potential(confs): pot = 0 for conf in confs: el1 = conf[:, 3] el2 = co...
[ "mff.models.TwoThreeEamManySpeciesModel", "numpy.arccos", "ase.Atoms", "numpy.array", "mff.models.ThreeBodyManySpeciesModel", "numpy.sin", "numpy.arange", "os.listdir", "mff.calculators.EamSingleSpecies", "mff.models.TwoBodyManySpeciesModel", "mff.calculators.EamManySpecies", "numpy.exp", "n...
[((605, 618), 'numpy.exp', 'np.exp', (['(-dist)'], {}), '(-dist)\n', (611, 618), True, 'import numpy as np\n'), ((1357, 1400), 'numpy.random.uniform', 'np.random.uniform', (['(0)', '(2 * np.pi)'], {'size': '(n * 2)'}), '(0, 2 * np.pi, size=n * 2)\n', (1374, 1400), True, 'import numpy as np\n'), ((1412, 1448), 'numpy.ra...
from __future__ import print_function import torch import numpy as np from PIL import Image import inspect import re import numpy as np import os import collections import pickle # Converts a Tensor into a Numpy array # |imtype|: the desired type of the converted numpy array def tensor2im(image_tensor, imtype=np.uint...
[ "torch.sum", "numpy.linalg.norm", "numpy.sin", "re.search", "os.path.exists", "numpy.mean", "numpy.max", "numpy.dot", "numpy.concatenate", "numpy.min", "numpy.tile", "torch.abs", "pickle.load", "numpy.std", "numpy.transpose", "PIL.Image.fromarray", "numpy.median", "pickle.dump", ...
[((2424, 2452), 'PIL.Image.fromarray', 'Image.fromarray', (['image_numpy'], {}), '(image_numpy)\n', (2439, 2452), False, 'from PIL import Image\n'), ((462, 493), 'numpy.tile', 'np.tile', (['image_numpy', '(3, 1, 1)'], {}), '(image_numpy, (3, 1, 1))\n', (469, 493), True, 'import numpy as np\n'), ((887, 901), 'pickle.loa...
# Created on 2018/12 # Author: <NAME> import os import time import numpy as np import torch from torch.utils.tensorboard import SummaryWriter class Solver(object): def __init__(self, data, model, optimizer, epochs, save_folder, checkpoint, continue_from, model_path, print_freq, early_stop, max_...
[ "torch.utils.tensorboard.SummaryWriter", "os.path.exists", "os.makedirs", "torch.load", "torch.stack", "torch.Tensor", "os.path.join", "torch.set_rng_state", "numpy.zeros", "torch.get_rng_state", "torch.save", "torch.no_grad", "time.time" ]
[((1354, 1379), 'torch.Tensor', 'torch.Tensor', (['self.epochs'], {}), '(self.epochs)\n', (1366, 1379), False, 'import torch\n'), ((1403, 1428), 'torch.Tensor', 'torch.Tensor', (['self.epochs'], {}), '(self.epochs)\n', (1415, 1428), False, 'import torch\n'), ((1475, 1497), 'torch.utils.tensorboard.SummaryWriter', 'Summ...
from pathlib import Path import cv2 import numpy as np from pfrl.wrappers import atari_wrappers from matplotlib import pyplot as plt from sklearn.metrics import accuracy_score from bovw.utils import prepare_data from bovw import BOVWClassifier def get_player_position(ram): """ given the ram state, get the p...
[ "bovw.BOVWClassifier", "cv2.drawKeypoints", "pathlib.Path", "pfrl.wrappers.atari_wrappers.make_atari", "numpy.array", "cv2.SIFT_create", "cv2.destroyAllWindows", "cv2.cvtColor", "bovw.utils.prepare_data", "cv2.waitKey", "sklearn.metrics.accuracy_score", "cv2.imread" ]
[((2268, 2282), 'pathlib.Path', 'Path', (['save_dir'], {}), '(save_dir)\n', (2272, 2282), False, 'from pathlib import Path\n'), ((3098, 3130), 'bovw.utils.prepare_data', 'prepare_data', (['"""data/monte_train"""'], {}), "('data/monte_train')\n", (3110, 3130), False, 'from bovw.utils import prepare_data\n'), ((3334, 336...
#!/usr/bin/python ######################################################################################################################## # # Copyright (c) 2014, Regents of the University of California # All rights reserved. # # Redistribution and use in source and binary forms, with or without modification, are permi...
[ "os.path.exists", "laygo.GridLayoutGeneratorHelper.generate_power_rails_from_rails_rect", "laygo.GridLayoutGenerator", "yaml.load", "numpy.array", "numpy.vstack", "bag.BagProject", "imp.find_module" ]
[((2218, 2234), 'numpy.array', 'np.array', (['[0, 0]'], {}), '([0, 0])\n', (2226, 2234), True, 'import numpy as np\n'), ((6472, 6488), 'numpy.array', 'np.array', (['[0, 0]'], {}), '([0, 0])\n', (6480, 6488), True, 'import numpy as np\n'), ((9362, 9378), 'numpy.array', 'np.array', (['[0, 0]'], {}), '([0, 0])\n', (9370, ...
import math import unittest from copy import copy import numpy as np from omicron.core import talib as ta class LibTest(unittest.TestCase): def test_barssince(self): condition = [False, True] self.assertEqual(0, ta.barssince(condition)) condition = [True, False] self.assertEqual...
[ "omicron.core.talib.vcross", "numpy.testing.assert_array_almost_equal", "omicron.core.talib.max_drawdown", "omicron.core.talib.angle", "omicron.core.talib.relative_error", "numpy.sqrt", "omicron.core.talib.cross", "omicron.core.talib.barssince", "numpy.array", "omicron.core.talib.slope", "omicro...
[((801, 817), 'omicron.core.talib.cross', 'ta.cross', (['y1', 'y2'], {}), '(y1, y2)\n', (809, 817), True, 'from omicron.core import talib as ta\n'), ((911, 927), 'omicron.core.talib.cross', 'ta.cross', (['y2', 'y1'], {}), '(y2, y1)\n', (919, 927), True, 'from omicron.core import talib as ta\n'), ((1112, 1128), 'omicron...
import matplotlib.pyplot as plt import numpy as np with open("RangeN.dat","r") as temp_file: data = temp_file.readlines() NN = [] ts = [] tbh = [] for line in data: NN.append(int(line.split()[0])) ts.append(float(line.split()[1])) tbh.append(float(line.split()[2])) NNl = np.array([np.log(itm) for itm...
[ "matplotlib.pyplot.grid", "matplotlib.pyplot.savefig", "numpy.power", "numpy.log", "numpy.exp", "numpy.linspace", "numpy.linalg.lstsq", "matplotlib.pyplot.subplots", "matplotlib.pyplot.legend", "matplotlib.pyplot.show" ]
[((720, 749), 'numpy.linspace', 'np.linspace', (['(1000)', '(15848)', '(200)'], {}), '(1000, 15848, 200)\n', (731, 749), True, 'import numpy as np\n'), ((868, 899), 'matplotlib.pyplot.subplots', 'plt.subplots', (['(1)'], {'figsize': '(7, 5)'}), '(1, figsize=(7, 5))\n', (880, 899), True, 'import matplotlib.pyplot as plt...
import timeit, functools def dist_test(): pp_sketchlib.queryDatabase("listeria", "listeria", names, names, kmers, 1) setup = """ import sys sys.path.insert(0, "build/lib.macosx-10.9-x86_64-3.7") import pp_sketchlib """ #import numpy as np # #from __main__ import dist_test # #kmers = np.arange(15, 30, 3) # #name...
[ "sys.path.insert", "functools.partial", "pp_sketchlib.queryDatabase", "numpy.arange" ]
[((47, 121), 'pp_sketchlib.queryDatabase', 'pp_sketchlib.queryDatabase', (['"""listeria"""', '"""listeria"""', 'names', 'names', 'kmers', '(1)'], {}), "('listeria', 'listeria', names, names, kmers, 1)\n", (73, 121), False, 'import pp_sketchlib\n'), ((624, 678), 'sys.path.insert', 'sys.path.insert', (['(0)', '"""build/l...
######################################################################################## # Compare two systems using bootstrap resampling # # adapted from https://github.com/neubig/util-scripts/blob/master/paired-bootstrap.py # # ...
[ "numpy.random.choice", "numpy.mean", "numpy.median" ]
[((2291, 2344), 'numpy.random.choice', 'np.random.choice', (['ids'], {'size': 'sample_size', 'replace': '(True)'}), '(ids, size=sample_size, replace=True)\n', (2307, 2344), True, 'import numpy as np\n'), ((3482, 3504), 'numpy.mean', 'np.mean', (['sys_scores[i]'], {}), '(sys_scores[i])\n', (3489, 3504), True, 'import nu...
# """Pytorch Dataset object that loads 27x27 patches that contain single cells.""" import os import random import scipy.io import numpy as np from PIL import Image import torch import torch.utils.data as data_utils import torchvision.transforms as transforms from torch.nn.functional import pad import dataloaders.a...
[ "numpy.random.normal", "dataloaders.additional_transforms.RandomHEStain", "dataloaders.additional_transforms.RandomVerticalFlip", "dataloaders.additional_transforms.HistoNormalize", "random.shuffle", "dataloaders.additional_transforms.RandomRotate", "PIL.Image.open", "torch.stack", "os.walk", "tor...
[((8439, 8463), 'torch.stack', 'torch.stack', (['bag_tensors'], {}), '(bag_tensors)\n', (8450, 8463), False, 'import torch\n'), ((5635, 5748), 'numpy.concatenate', 'np.concatenate', (["(mat_inflammatory['detection'], mat_fibroblast['detection'], mat_others[\n 'detection'])"], {'axis': '(0)'}), "((mat_inflammatory['d...
# =============================================================================== # Copyright 2013 <NAME> # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/...
[ "traitsui.api.VGroup", "PIL.Image.fromarray", "PIL.Image.blend", "numpy.asarray", "numpy.array", "traitsui.api.Item", "traits.api.Range", "pychron.core.ui.image_editor.ImageEditor", "traits.api.Bool" ]
[((1313, 1328), 'traits.api.Range', 'Range', (['(0.0)', '(1.0)'], {}), '(0.0, 1.0)\n', (1318, 1328), False, 'from traits.api import Array, Event, Range, Bool\n'), ((1369, 1379), 'traits.api.Bool', 'Bool', (['(True)'], {}), '(True)\n', (1373, 1379), False, 'from traits.api import Array, Event, Range, Bool\n'), ((1451, 1...
''' Generate instance groundtruth .txt files (for evaluation) ''' import numpy as np import glob import torch import os semantic_label_idxs = [1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 14, 16, 24, 28, 33, 34, 36, 39] semantic_label_names = ['wall', 'floor', 'cabinet', 'bed', 'chair', 'sofa', 'table', 'door', 'window', '...
[ "os.path.exists", "numpy.where", "torch.load", "os.path.join", "numpy.zeros", "os.mkdir" ]
[((588, 601), 'torch.load', 'torch.load', (['i'], {}), '(i)\n', (598, 601), False, 'import torch\n'), ((630, 659), 'os.path.exists', 'os.path.exists', (["(split + '_gt')"], {}), "(split + '_gt')\n", (644, 659), False, 'import os\n'), ((669, 692), 'os.mkdir', 'os.mkdir', (["(split + '_gt')"], {}), "(split + '_gt')\n", (...
import numpy as np import matplotlib.pyplot as plt class ToySquares: """A set of squares that grow and shift to the right over time Parameters ---------- canvas_size : int size of the canvas on which the toy squares fall, in pixels n_objects : int number of toy squares to spawn ...
[ "numpy.minimum", "numpy.logical_and", "numpy.ones", "numpy.random.choice", "numpy.random.rand", "numpy.sum", "numpy.zeros", "numpy.save", "numpy.arange" ]
[((1266, 1281), 'numpy.arange', 'np.arange', (['(1)', '(5)'], {}), '(1, 5)\n', (1275, 1281), True, 'import numpy as np\n'), ((1341, 1353), 'numpy.sum', 'np.sum', (['prob'], {}), '(prob)\n', (1347, 1353), True, 'import numpy as np\n'), ((1370, 1444), 'numpy.random.choice', 'np.random.choice', (['allowed_sizes'], {'size'...
import gym import numpy as np import os,sys,time import math if 'SUMO_HOME' in os.environ: tools = os.path.join(os.environ['SUMO_HOME'],'tools') sys.path.append(tools) else: sys.exit("please declare environment variable 'SUMO_HOME'") import xml.etree.ElementTree as ET from xml.dom import minidom ...
[ "lib.seeding.np_random", "math.floor", "traci.vehicle.getSpeed", "sys.exit", "traci.lanearea.getJamLengthVehicle", "sys.path.append", "traci.lanearea.getLastStepMeanSpeed", "traci.vehicle.getPosition", "traci.lanearea.getLastStepVehicleNumber", "numpy.mean", "xml.etree.ElementTree.parse", "num...
[((108, 154), 'os.path.join', 'os.path.join', (["os.environ['SUMO_HOME']", '"""tools"""'], {}), "(os.environ['SUMO_HOME'], 'tools')\n", (120, 154), False, 'import os, sys, time\n'), ((159, 181), 'sys.path.append', 'sys.path.append', (['tools'], {}), '(tools)\n', (174, 181), False, 'import os, sys, time\n'), ((194, 253)...
# ---------------------------------------------------------------------- # # <NAME>, U.S. Geological Survey # <NAME>, GNS Science # <NAME>, University of Chicago # # This code was developed as part of the Computational Infrastructure # for Geodynamics (http://geodynamics.org). # # Copyright (c) 2010-2018 University of ...
[ "numpy.exp", "numpy.linspace", "numpy.ones", "numpy.zeros" ]
[((1480, 1549), 'numpy.linspace', 'numpy.linspace', (['startTime', 'endTime'], {'num': 'numSteps', 'dtype': 'numpy.float64'}), '(startTime, endTime, num=numSteps, dtype=numpy.float64)\n', (1494, 1549), False, 'import numpy\n'), ((1663, 1738), 'numpy.exp', 'numpy.exp', (['(-p_youngs * timeArray / (6.0 * p_viscosity * (1...
#### All this code needs to be modified. We need to modify for LiTS. ##### Neeed to probably do some kind of from promise2012.Vnet.model_vnet3d import Vnet3dModule from promise2012.Vnet.util import convertMetaModelToPbModel import numpy as np import pandas as pd import cv2 def train(): ''' P...
[ "pandas.read_csv", "promise2012.Vnet.model_vnet3d.Vnet3dModule", "promise2012.Vnet.util.convertMetaModelToPbModel", "cv2.morphologyEx", "numpy.zeros", "cv2.getStructuringElement", "numpy.random.shuffle" ]
[((422, 447), 'pandas.read_csv', 'pd.read_csv', (['"""trainY.csv"""'], {}), "('trainY.csv')\n", (433, 447), True, 'import pandas as pd\n'), ((468, 493), 'pandas.read_csv', 'pd.read_csv', (['"""trainX.csv"""'], {}), "('trainX.csv')\n", (479, 493), True, 'import pandas as pd\n'), ((681, 704), 'numpy.random.shuffle', 'np....
# Tencent is pleased to support the open source community by making PocketFlow available. # # Copyright (C) 2018 THL A29 Limited, a Tencent company. All rights reserved. # # Licensed under the BSD 3-Clause License (the "License"); # you may not use this file except in compliance with the License. # You may obtain a cop...
[ "learners.channel_pruning.channel_pruner.ChannelPruner", "tensorflow.get_variable", "learners.distillation_helper.DistillationHelper", "numpy.log", "math.log", "numpy.array", "utils.multi_gpu_wrapper.MultiGpuWrapper.DistributedOptimizer", "tensorflow.control_dependencies", "tensorflow.Graph", "ten...
[((1471, 1743), 'tensorflow.app.flags.DEFINE_string', 'tf.app.flags.DEFINE_string', (['"""cp_prune_option"""', '"""auto"""', '"""the action we want to prune the channel you can select one of the following option:\n uniform:\n prune with a uniform compression ratio\n list:\n prune with a list of co...
import numpy as np import os from train import parseArgs FLAGS = parseArgs() model_dir = FLAGS.model_dir from matplotlib import pyplot as plt import matplotlib font = {'size' : 8} matplotlib.rc('font', **font) fig = plt.figure() ax = fig.add_subplot(211) ax.set_title("Actor Loss") ax.set_xlabel("Train Steps") ax2 ...
[ "os.path.join", "numpy.array", "matplotlib.pyplot.figure", "matplotlib.rc", "train.parseArgs", "numpy.load", "matplotlib.pyplot.show" ]
[((65, 76), 'train.parseArgs', 'parseArgs', ([], {}), '()\n', (74, 76), False, 'from train import parseArgs\n'), ((183, 212), 'matplotlib.rc', 'matplotlib.rc', (['"""font"""'], {}), "('font', **font)\n", (196, 212), False, 'import matplotlib\n'), ((221, 233), 'matplotlib.pyplot.figure', 'plt.figure', ([], {}), '()\n', ...
import numpy as np import gym from envs.utils import goal_distance, goal_distance_obs from utils.os_utils import remove_color class CustomGoalEnv(): def __init__(self, args): self.args = args self.env = gym.make(args.env) self.np_random = self.env.env.np_random self.distance_thresh...
[ "utils.os_utils.remove_color", "gym.make", "numpy.square" ]
[((225, 243), 'gym.make', 'gym.make', (['args.env'], {}), '(args.env)\n', (233, 243), False, 'import gym\n'), ((2223, 2240), 'utils.os_utils.remove_color', 'remove_color', (['key'], {}), '(key)\n', (2235, 2240), False, 'from utils.os_utils import remove_color\n'), ((1775, 1801), 'numpy.square', 'np.square', (['(achieve...
import numpy from numpy.testing import assert_raises, assert_equal, assert_allclose from fuel.datasets import Iris from tests import skip_if_not_available def test_iris_all(): skip_if_not_available(datasets=['iris.hdf5']) dataset = Iris(('all',), load_in_memory=False) handle = dataset.open() data, ...
[ "numpy.testing.assert_equal", "fuel.datasets.Iris", "numpy.testing.assert_allclose", "numpy.testing.assert_raises", "numpy.array", "tests.skip_if_not_available" ]
[((184, 229), 'tests.skip_if_not_available', 'skip_if_not_available', ([], {'datasets': "['iris.hdf5']"}), "(datasets=['iris.hdf5'])\n", (205, 229), False, 'from tests import skip_if_not_available\n'), ((245, 281), 'fuel.datasets.Iris', 'Iris', (["('all',)"], {'load_in_memory': '(False)'}), "(('all',), load_in_memory=F...
# coding: utf-8 import base64 from keras import models import tensorflow as tf import os import cv2 import numpy as np import scipy.fftpack graph = tf.get_default_graph() PATH = lambda p: os.path.abspath( os.path.join(os.path.dirname(__file__), p) ) TEXT_MODEL = "" IMG_MODEL = "" def pretreatment_get_text(img,...
[ "numpy.packbits", "numpy.median", "base64.b64decode", "os.path.dirname", "cv2.imdecode", "cv2.cvtColor", "cv2.resize", "numpy.fromstring", "tensorflow.get_default_graph" ]
[((150, 172), 'tensorflow.get_default_graph', 'tf.get_default_graph', ([], {}), '()\n', (170, 172), True, 'import tensorflow as tf\n'), ((423, 478), 'cv2.resize', 'cv2.resize', (['im', '(32, 32)'], {'interpolation': 'cv2.INTER_CUBIC'}), '(im, (32, 32), interpolation=cv2.INTER_CUBIC)\n', (433, 478), False, 'import cv2\n...
################################################################################ # Numba-DPPY # # Copyright 2020-2021 Intel Corporation # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain ...
[ "numpy.reshape", "numpy.random.random", "numpy.testing.assert_allclose", "numba.njit", "dpctl.SyclDevice", "numba_dppy.tests._helper.dpnp_debug", "pytest.mark.parametrize", "dpctl.device_context", "numpy.empty", "pytest.fixture" ]
[((1159, 1196), 'pytest.fixture', 'pytest.fixture', ([], {'params': 'list_of_dtypes'}), '(params=list_of_dtypes)\n', (1173, 1196), False, 'import pytest\n'), ((1473, 1509), 'pytest.fixture', 'pytest.fixture', ([], {'params': 'list_of_shape'}), '(params=list_of_shape)\n', (1487, 1509), False, 'import pytest\n'), ((1671,...
import numpy as np from skimage import morphology import hy # setup tensorflow import os os.environ["CUDA_VISIBLE_DEVICES"]="" import tensorflow as tf print(f'tensorflow version = {tf.__version__}') tf_device = '/cpu:0' setup = { # based on 3_compare_re_nn.py 'in_size': 64, 'undersample_target': False, # Number of...
[ "tensorflow.reduce_sum", "tensorflow.compat.v1.train.AdamOptimizer", "tensorflow.signal.fft3d", "tensorflow.compat.v1.Session", "numpy.save", "numpy.imag", "tensorflow.compat.v1.placeholder", "tensorflow.compat.v1.global_variables_initializer", "numpy.max", "numpy.real", "numpy.min", "tensorfl...
[((1861, 1899), 'tensorflow.compat.v1.disable_eager_execution', 'tf.compat.v1.disable_eager_execution', ([], {}), '()\n', (1897, 1899), True, 'import tensorflow as tf\n'), ((1603, 1614), 'numpy.abs', 'np.abs', (['obj'], {}), '(obj)\n', (1609, 1614), True, 'import numpy as np\n'), ((2051, 2073), 'numpy.copy', 'np.copy',...
import numpy as np def ReLU(x): return np.maximum(x,0) def dReLU(x,y): x[y == 0]=0 return x
[ "numpy.maximum" ]
[((47, 63), 'numpy.maximum', 'np.maximum', (['x', '(0)'], {}), '(x, 0)\n', (57, 63), True, 'import numpy as np\n')]
from obspy import UTCDateTime from obspy.clients.fdsn import Client from obspy.taup import TauPyModel import numpy as np import seisutils as su import os import shutil import time # -------------------------------------------------------------------------------------------------------------- # newFetch.py # # This is ...
[ "os.path.exists", "numpy.abs", "os.makedirs", "obspy.taup.TauPyModel", "numpy.real", "obspy.UTCDateTime.now", "numpy.nonzero", "seisutils.haversine", "obspy.clients.fdsn.Client", "time.time", "numpy.imag" ]
[((1118, 1129), 'time.time', 'time.time', ([], {}), '()\n', (1127, 1129), False, 'import time\n'), ((1273, 1287), 'obspy.clients.fdsn.Client', 'Client', (['"""IRIS"""'], {}), "('IRIS')\n", (1279, 1287), False, 'from obspy.clients.fdsn import Client\n'), ((2050, 2073), 'os.path.exists', 'os.path.exists', (['sac_dir'], {...
import cv2 import numpy as np import keras.models import glob from datetime import datetime PATH_TEST = "../image_dataset_keras_color/" VIDEO_INFERENCE = 0 IMG_INFERNECE = 1 model_color = keras.models.load_model('saved_models/keras_RAS_model_color_3.h5') color_class = ['Yellow', 'Green', 'Orange', 'Red', 'Blue', 'P...
[ "numpy.argmax", "cv2.imshow", "datetime.datetime.now", "numpy.array", "cv2.VideoCapture", "cv2.resize", "cv2.waitKey", "glob.glob", "cv2.imread" ]
[((462, 481), 'cv2.VideoCapture', 'cv2.VideoCapture', (['(0)'], {}), '(0)\n', (478, 481), False, 'import cv2\n'), ((521, 535), 'datetime.datetime.now', 'datetime.now', ([], {}), '()\n', (533, 535), False, 'from datetime import datetime\n'), ((694, 713), 'numpy.array', 'np.array', (['input_img'], {}), '(input_img)\n', (...
from keras.models import Sequential from keras.layers.core import Dense import numpy as np import time number_neuron_connections = 3000000 u = list() for i in range(112): u.append(np.random.rand(number_neuron_connections, 6).astype(np.float32)) def create_mlp(): model = Sequential() model.add(Dense(16,...
[ "numpy.random.rand", "keras.models.Sequential", "numpy.load", "time.time", "keras.layers.core.Dense" ]
[((559, 580), 'numpy.load', 'np.load', (['"""trainX.npy"""'], {}), "('trainX.npy')\n", (566, 580), True, 'import numpy as np\n'), ((590, 611), 'numpy.load', 'np.load', (['"""trainY.npy"""'], {}), "('trainY.npy')\n", (597, 611), True, 'import numpy as np\n'), ((620, 640), 'numpy.load', 'np.load', (['"""testX.npy"""'], {...
""" =========== Convex Hull =========== The convex hull of a binary image is the set of pixels included in the smallest convex polygon that surround all white pixels in the input. In this example, we show how the input pixels (white) get filled in by the convex hull (white and grey). A good overview of the algorithm...
[ "numpy.copy", "numpy.array", "skimage.morphology.convex_hull_image", "matplotlib.pyplot.subplots", "matplotlib.pyplot.show" ]
[((561, 767), 'numpy.array', 'np.array', (['[[0, 0, 0, 0, 0, 0, 0, 0, 0], [0, 0, 0, 0, 1, 0, 0, 0, 0], [0, 0, 0, 1, 0, \n 1, 0, 0, 0], [0, 0, 1, 0, 0, 0, 1, 0, 0], [0, 1, 0, 0, 0, 0, 0, 1, 0],\n [0, 0, 0, 0, 0, 0, 0, 0, 0]]'], {'dtype': 'float'}), '([[0, 0, 0, 0, 0, 0, 0, 0, 0], [0, 0, 0, 0, 1, 0, 0, 0, 0], [0, 0...
import cv2 import torch import scipy.special import numpy as np import torchvision import torchvision.transforms as transforms from PIL import Image from enum import Enum from scipy.spatial.distance import cdist from ultrafastLaneDetector.model import parsingNet lane_colors = [(0,0,255),(0,255,0),(255,0,0),(0,255,255...
[ "PIL.Image.fromarray", "numpy.flipud", "torch.load", "torchvision.transforms.Resize", "numpy.argmax", "numpy.sum", "numpy.linspace", "numpy.array", "cv2.addWeighted", "cv2.circle", "cv2.cvtColor", "torchvision.transforms.Normalize", "ultrafastLaneDetector.model.parsingNet", "torch.no_grad"...
[((1814, 1932), 'ultrafastLaneDetector.model.parsingNet', 'parsingNet', ([], {'pretrained': '(False)', 'backbone': '"""18"""', 'cls_dim': '(cfg.griding_num + 1, cfg.cls_num_per_lane, 4)', 'use_aux': '(False)'}), "(pretrained=False, backbone='18', cls_dim=(cfg.griding_num + 1,\n cfg.cls_num_per_lane, 4), use_aux=Fals...
# -*- coding: utf-8 -*- """ Analysis + Visualization functions for planning """ # Author: <NAME> <<EMAIL>> # License: MIT import warnings import numpy as np import matplotlib.pyplot as plt import opencda.core.plan.drive_profile_plotting as open_plt class PlanDebugHelper(object): """This class aims to save stati...
[ "numpy.mean", "opencda.core.plan.drive_profile_plotting.draw_velocity_profile_single_plot", "opencda.core.plan.drive_profile_plotting.draw_ttc_profile_single_plot", "numpy.array", "matplotlib.pyplot.figure", "opencda.core.plan.drive_profile_plotting.draw_acceleration_profile_single_plot", "numpy.std", ...
[((1584, 1617), 'warnings.filterwarnings', 'warnings.filterwarnings', (['"""ignore"""'], {}), "('ignore')\n", (1607, 1617), False, 'import warnings\n'), ((1678, 1690), 'matplotlib.pyplot.figure', 'plt.figure', ([], {}), '()\n', (1688, 1690), True, 'import matplotlib.pyplot as plt\n'), ((1699, 1715), 'matplotlib.pyplot....
# -*- coding: utf-8 -*- import numpy as np import pprint from envs.GridWorld import GridworldEnv pp = pprint.PrettyPrinter(indent=2) env = GridworldEnv() import matplotlib.pyplot as pl def value_iteration(env, theta=0.0001, discount_factor=1.0): """ Value Iteration Algorithm. Args: env: O...
[ "matplotlib.pyplot.ylabel", "numpy.array", "numpy.testing.assert_array_almost_equal", "envs.GridWorld.GridworldEnv", "numpy.reshape", "matplotlib.pyplot.xlabel", "matplotlib.pyplot.plot", "numpy.max", "pprint.PrettyPrinter", "numpy.abs", "matplotlib.pyplot.savefig", "numpy.argmax", "matplotl...
[((106, 136), 'pprint.PrettyPrinter', 'pprint.PrettyPrinter', ([], {'indent': '(2)'}), '(indent=2)\n', (126, 136), False, 'import pprint\n'), ((143, 157), 'envs.GridWorld.GridworldEnv', 'GridworldEnv', ([], {}), '()\n', (155, 157), False, 'from envs.GridWorld import GridworldEnv\n'), ((2304, 2376), 'numpy.array', 'np.a...
import numpy as np import numba as nb _signatures = [ (nb.float32[:], nb.float32[:], nb.float32[:]), (nb.float64[:], nb.float64[:], nb.float64[:]), ] @nb.njit(_signatures, cache=True) def _de_castlejau(z, beta, res): # De Casteljau algorithm, numerically stable n = len(beta) if n == 0: r...
[ "numba.extending.overload", "numba.njit", "numba.core.errors.TypingError", "numba.guvectorize", "numpy.zeros", "numpy.empty_like", "numpy.atleast_1d" ]
[((163, 195), 'numba.njit', 'nb.njit', (['_signatures'], {'cache': '(True)'}), '(_signatures, cache=True)\n', (170, 195), True, 'import numba as nb\n'), ((748, 780), 'numba.njit', 'nb.njit', (['_signatures'], {'cache': '(True)'}), '(_signatures, cache=True)\n', (755, 780), True, 'import numba as nb\n'), ((980, 999), 'n...
# Experiment script to compare ReLU dAs versus Gaussian-Bernoulli dAs # Train each with varying amounts of noise, import numpy import theano import theano.tensor as T from theano.tensor.shared_randomstreams import RandomStreams from AutoEncoder import AutoEncoder from AutoEncoder import ReluAutoEncoder from AutoEnco...
[ "load_shared.load_data_labeled", "numpy.mean", "AutoEncoder.ReluAutoEncoder", "theano.tensor.lscalar", "theano.function", "time.clock", "theano.tensor.matrix", "optparse.OptionParser", "extract_datasets.extract_labeled_chunkrange", "os.getcwd", "os.chdir", "datetime.datetime.now", "os.path.s...
[((1081, 1095), 'optparse.OptionParser', 'OptionParser', ([], {}), '()\n', (1093, 1095), False, 'from optparse import OptionParser\n'), ((1544, 1560), 'datetime.datetime.today', 'datetime.today', ([], {}), '()\n', (1558, 1560), False, 'from datetime import datetime\n'), ((1980, 2035), 'extract_datasets.extract_labeled_...
from __future__ import absolute_import from __future__ import division from __future__ import print_function import os import sys from scipy.io import loadmat import numpy as np from scipy import linalg import glob import pickle from six.moves import xrange # pylint: disable=redefined-builtin from six.moves import ...
[ "os.path.exists", "tensorflow.app.flags.DEFINE_integer", "numpy.arange", "os.makedirs", "numpy.delete", "scipy.io.loadmat", "os.path.join", "tensorflow.app.flags.DEFINE_string", "six.moves.urllib.request.urlretrieve", "numpy.concatenate", "sys.stdout.flush", "tensorflow.cast", "numpy.random....
[((555, 619), 'tensorflow.app.flags.DEFINE_string', 'tf.app.flags.DEFINE_string', (['"""data_dir"""', '"""/cache/vat-tf/svhn"""', '""""""'], {}), "('data_dir', '/cache/vat-tf/svhn', '')\n", (581, 619), True, 'import tensorflow as tf\n'), ((620, 715), 'tensorflow.app.flags.DEFINE_integer', 'tf.app.flags.DEFINE_integer',...
# -*- coding: utf-8 -*- """ Created on Fri May 8 23:00:16 2020 @author: Han """ import numpy as np import seaborn as sns import matplotlib import matplotlib.pyplot as plt from scipy.stats import pearsonr def softmax(x, softmax_temperature, bias = 0): # Put the bias outside /sigma to make it comparable acro...
[ "matplotlib.pyplot.setp", "seaborn.set", "numpy.random.rand", "seaborn.despine", "matplotlib.pyplot.gca", "numpy.max", "numpy.exp", "numpy.nancumsum", "numpy.sum", "scipy.stats.pearsonr", "numpy.cumsum" ]
[((589, 598), 'numpy.max', 'np.max', (['X'], {}), '(X)\n', (595, 598), True, 'import numpy as np\n'), ((1126, 1181), 'seaborn.set', 'sns.set', ([], {'style': '"""ticks"""', 'context': '"""paper"""', 'font_scale': '(1.4)'}), "(style='ticks', context='paper', font_scale=1.4)\n", (1133, 1181), True, 'import seaborn as sns...
# BSD 3-Clause License; see https://github.com/scikit-hep/awkward-1.0/blob/main/LICENSE import pytest # noqa: F401 import numpy as np # noqa: F401 import awkward as ak # noqa: F401 numba = pytest.importorskip("numba") def test_unmasked(): @numba.njit def find_it(array): for item in array: ...
[ "awkward.layout.IndexedArray64", "awkward.Array", "awkward.layout.UnmaskedArray", "numpy.array", "pytest.importorskip" ]
[((195, 223), 'pytest.importorskip', 'pytest.importorskip', (['"""numba"""'], {}), "('numba')\n", (214, 223), False, 'import pytest\n'), ((520, 552), 'awkward.layout.UnmaskedArray', 'ak.layout.UnmaskedArray', (['content'], {}), '(content)\n', (543, 552), True, 'import awkward as ak\n'), ((565, 583), 'awkward.Array', 'a...
# Import dependencies. import os import numpy as np import cv2 from scipy.io import savemat # Create labels. C = np.ones((349,)) N = np.zeros((397,)) labels = np.concatenate((C, N), axis=0) # Load the datased and resize to imagenet size. covid = os.listdir('CT_COVID') n_covid = os.listdir('CT_NonCOVID') data=[] for...
[ "os.listdir", "scipy.io.savemat", "numpy.ones", "numpy.array", "numpy.zeros", "numpy.concatenate", "cv2.resize", "cv2.imread" ]
[((114, 129), 'numpy.ones', 'np.ones', (['(349,)'], {}), '((349,))\n', (121, 129), True, 'import numpy as np\n'), ((134, 150), 'numpy.zeros', 'np.zeros', (['(397,)'], {}), '((397,))\n', (142, 150), True, 'import numpy as np\n'), ((160, 190), 'numpy.concatenate', 'np.concatenate', (['(C, N)'], {'axis': '(0)'}), '((C, N)...
import inspect import logging import hashlib import gym import numpy as np from gym.spaces import Box, Tuple, Dict from mujoco_py import MjSimState from mujoco_worldgen.util.types import enforce_is_callable from mujoco_worldgen.util.sim_funcs import ( empty_get_info, flatten_get_obs, false_get_diverged, ...
[ "logging.getLogger", "numpy.prod", "numpy.minimum", "numpy.asarray", "mujoco_worldgen.util.types.enforce_is_callable", "gym.spaces.Box", "inspect.getfile", "mujoco_py.mjviewer.MjViewer", "numpy.random.randint", "numpy.maximum", "numpy.random.RandomState" ]
[((378, 405), 'logging.getLogger', 'logging.getLogger', (['__name__'], {}), '(__name__)\n', (395, 405), False, 'import logging\n'), ((2871, 2967), 'mujoco_worldgen.util.types.enforce_is_callable', 'enforce_is_callable', (['get_sim', '"""get_sim should be callable and should return an MjSim object"""'], {}), "(get_sim,\...
import numpy as np class Team(object): def __init__(self,teamId,rank=1000,scored=0): self.teamId = teamId self.rank = rank self.scored = scored self.new_rank = 0 self.perf = 0 class Match(object): def __init__(self,matchId,level,homeTeam,awayTeam,homeTeam_goals...
[ "numpy.abs", "numpy.power" ]
[((1204, 1267), 'numpy.power', 'np.power', (['(10)', '((self.awayTeam.rank - self.homeTeam.rank) / 400.0)'], {}), '(10, (self.awayTeam.rank - self.homeTeam.rank) / 400.0)\n', (1212, 1267), True, 'import numpy as np\n'), ((1905, 1926), 'numpy.abs', 'np.abs', (['self.goalDiff'], {}), '(self.goalDiff)\n', (1911, 1926), Tr...
from collections import OrderedDict from functools import partial import matplotlib.pyplot as plt from scipy.linalg import toeplitz import scipy.sparse as sps import numpy as np import pandas as pd import bioframe import cooler from .lib.numutils import LazyToeplitz def make_bin_aligned_windows(binsize, chroms, cen...
[ "numpy.dstack", "bioframe.tools.tsv", "numpy.asarray", "bioframe.tools.bedtools.intersect", "numpy.any", "numpy.argsort", "functools.partial", "bioframe.parse_region_string", "numpy.concatenate", "pandas.DataFrame", "numpy.full" ]
[((1524, 1542), 'numpy.asarray', 'np.asarray', (['chroms'], {}), '(chroms)\n', (1534, 1542), True, 'import numpy as np\n'), ((1560, 1582), 'numpy.asarray', 'np.asarray', (['centers_bp'], {}), '(centers_bp)\n', (1570, 1582), True, 'import numpy as np\n'), ((1747, 1773), 'numpy.any', 'np.any', (['(left_bp > right_bp)'], ...
#!/usr/bin/env python """ Small demonstration of the hlines and vlines plots. """ from matplotlib import pyplot as plt from numpy import sin, exp, absolute, pi, arange from numpy.random import normal def f(t): s1 = sin(2 * pi * t) e1 = exp(-t) return absolute((s1 * e1)) + .05 t = arange(0.0, 5.0, 0.1...
[ "numpy.random.normal", "numpy.absolute", "numpy.exp", "matplotlib.pyplot.figure", "numpy.sin", "numpy.arange", "matplotlib.pyplot.show" ]
[((300, 321), 'numpy.arange', 'arange', (['(0.0)', '(5.0)', '(0.1)'], {}), '(0.0, 5.0, 0.1)\n', (306, 321), False, 'from numpy import sin, exp, absolute, pi, arange\n'), ((374, 401), 'matplotlib.pyplot.figure', 'plt.figure', ([], {'figsize': '(12, 6)'}), '(figsize=(12, 6))\n', (384, 401), True, 'from matplotlib import ...
import os import torch from torchvision.datasets import CelebA, CIFAR10, LSUN, ImageFolder from torch.utils.data import Dataset, DataLoader, random_split, Subset from utils import CropTransform import torchvision.transforms as transforms import numpy as np from tqdm import tqdm import cv2 from PIL import Image # Chang...
[ "torchvision.transforms.CenterCrop", "numpy.mean", "cv2.Laplacian", "PIL.Image.open", "cv2.imread", "utils.CropTransform", "tqdm.tqdm", "os.path.join", "torch.is_tensor", "numpy.rot90", "torch.utils.data.DataLoader", "torchvision.transforms.Resize", "cv2.resize", "torchvision.transforms.To...
[((2598, 2649), 'torch.utils.data.DataLoader', 'DataLoader', (['dataset'], {'shuffle': 'shuffle', 'num_workers': '(8)'}), '(dataset, shuffle=shuffle, num_workers=8)\n', (2608, 2649), False, 'from torch.utils.data import Dataset, DataLoader, random_split, Subset\n'), ((1025, 1045), 'torch.is_tensor', 'torch.is_tensor', ...
"""Dummy Policy for algo tests..""" import numpy as np from garage.np.policies import Policy class DummyPolicy(Policy): """Dummy Policy. Args: env_spec (garage.envs.env_spec.EnvSpec): Environment specification. """ def __init__(self, env_spec): # pylint: disable=super-init-not-call...
[ "numpy.random.uniform" ]
[((411, 441), 'numpy.random.uniform', 'np.random.uniform', (['(-1)', '(1)', '(1000)'], {}), '(-1, 1, 1000)\n', (428, 441), True, 'import numpy as np\n')]
# This file contains code from https://github.com/tensorflow/models/blob/master/research/deeplab/deeplab_demo.ipynb # and was released under an Apache 2 license import os import tarfile import numpy as np import tensorflow as tf import warnings from config import _FULL_MODEL_PATH from config import _MOBILE_MODEL_PATH f...
[ "logging.getLogger", "tensorflow.Graph", "tarfile.open", "tensorflow.Session", "os.environ.get", "io.BytesIO", "numpy.asarray", "os.path.basename", "tensorflow.import_graph_def", "warnings.warn", "flask.abort" ]
[((376, 395), 'logging.getLogger', 'logging.getLogger', ([], {}), '()\n', (393, 395), False, 'import logging\n'), ((498, 544), 'os.environ.get', 'os.environ.get', (['"""MODEL_TYPE"""'], {'default': '"""mobile"""'}), "('MODEL_TYPE', default='mobile')\n", (512, 544), False, 'import os\n'), ((562, 603), 'os.environ.get', ...
""" MAP Client Plugin Step """ import json import os import numpy as np from mapclientplugins.cimconverterstep.SurfaceExtractor import Subdivision_Surface from PySide2 import QtGui from mapclient.mountpoints.workflowstep import WorkflowStepMountPoint from mapclientplugins.cimconverterstep.configuredialog import Confi...
[ "json.loads", "mapclientplugins.cimconverterstep.configuredialog.ConfigureDialog", "os.makedirs", "json.dumps", "os.path.join", "os.path.isdir", "mapclientplugins.cimconverterstep.SurfaceExtractor.Subdivision_Surface", "numpy.shape", "PySide2.QtGui.QImage", "os.path.abspath" ]
[((789, 846), 'PySide2.QtGui.QImage', 'QtGui.QImage', (['""":/cimconverterstep/images/data-source.png"""'], {}), "(':/cimconverterstep/images/data-source.png')\n", (801, 846), False, 'from PySide2 import QtGui\n'), ((1788, 1822), 'os.path.join', 'os.path.join', (["(input_path + '\\\\csv')"], {}), "(input_path + '\\\\cs...
"""Client to access DICOM Part10 files through a layer of abstraction.""" import collections import io import logging import math import os import re import sqlite3 import sys import time import traceback from collections import OrderedDict from enum import Enum from pathlib import Path from typing import ( Any, ...
[ "logging.getLogger", "numpy.product", "pydicom.filereader.data_element_offset_to_value", "traceback.format_tb", "math.floor", "io.BytesIO", "pydicom.filewriter.dcmwrite", "pydicom.valuerep.DA", "pydicom.dataset.Dataset", "os.remove", "pydicom.filereader.dcmread", "pydicom.dataset.FileMetaDatas...
[((1217, 1244), 'logging.getLogger', 'logging.getLogger', (['__name__'], {}), '(__name__)\n', (1234, 1244), False, 'import logging\n'), ((4090, 4143), 'pydicom.filereader.data_element_offset_to_value', 'data_element_offset_to_value', (['fp.is_implicit_VR', '"""OB"""'], {}), "(fp.is_implicit_VR, 'OB')\n", (4118, 4143), ...
import math from skimage import io from skimage.feature import blob_log from skimage import exposure from skimage.morphology import extrema import cv2 import os import sys import numpy as np # Beware, not giving min/max sigma's prompts skimage to calculate it, which takes at least twice as long, so for largescale use...
[ "skimage.morphology.extrema.local_maxima", "numpy.mean", "math.ceil", "math.floor", "numpy.logical_or", "skimage.io.imread", "numpy.std", "skimage.feature.blob_log" ]
[((1952, 1973), 'skimage.io.imread', 'io.imread', (['image_path'], {}), '(image_path)\n', (1961, 1973), False, 'from skimage import io\n'), ((1993, 2020), 'skimage.morphology.extrema.local_maxima', 'extrema.local_maxima', (['image'], {}), '(image)\n', (2013, 2020), False, 'from skimage.morphology import extrema\n'), ((...
import numpy as np import csv class Rullo: def __init__(self, content, row_constraints, column_constraints,): """Creates a rullo board Attributes ---------- content: 2-dim array Values on the board row_constrai...
[ "numpy.array", "numpy.zeros", "numpy.asarray", "csv.reader" ]
[((616, 649), 'numpy.asarray', 'np.asarray', (['content'], {'dtype': 'np.int'}), '(content, dtype=np.int)\n', (626, 649), True, 'import numpy as np\n'), ((681, 722), 'numpy.asarray', 'np.asarray', (['row_constraints'], {'dtype': 'np.int'}), '(row_constraints, dtype=np.int)\n', (691, 722), True, 'import numpy as np\n'),...
#!/usr/bin/env python3 #################################################################################################### # Copyright (c) Microsoft Corporation. All rights reserved. # Licensed under the MIT License. See LICENSE in the project root for license information. #############################################...
[ "logging.getLogger", "accera.tanh", "sys.path.insert", "accera.ceil", "numpy.random.rand", "accera.Nest", "sys.platform.startswith", "accera.Array", "accera.sqrt", "accera.log10", "unittest.main", "accera.min", "accera.floor", "accera.logical_or", "numpy.flip", "accera.max", "pathlib...
[((1515, 1534), 'logging.getLogger', 'logging.getLogger', ([], {}), '()\n', (1532, 1534), False, 'import logging\n'), ((816, 860), 'sys.path.insert', 'sys.path.insert', (['(1)', '"""@CMAKE_INSTALL_PREFIX@"""'], {}), "(1, '@CMAKE_INSTALL_PREFIX@')\n", (831, 860), False, 'import sys\n'), ((55966, 56014), 'unittest.skip',...
# pylint: disable=no-member, invalid-name, redefined-outer-name # pylint: disable=too-many-lines from collections import namedtuple, OrderedDict import os from urllib.parse import urlunsplit import numpy as np from numpy import ma import pymc3 as pm import pytest from arviz import ( concat, conve...
[ "numpy.ma.masked_values", "arviz.load_data", "arviz.from_pyro", "arviz.from_pystan", "numpy.array", "pymc3.sample", "emcee.backends.HDFBackend", "pytest.fixture", "numpy.arange", "os.remove", "pystan.StanModel", "os.path.exists", "arviz.convert_to_dataset", "arviz.from_emcee", "arviz.lis...
[((1182, 1212), 'pytest.fixture', 'pytest.fixture', ([], {'scope': '"""module"""'}), "(scope='module')\n", (1196, 1212), False, 'import pytest\n'), ((1249, 1279), 'pytest.fixture', 'pytest.fixture', ([], {'scope': '"""module"""'}), "(scope='module')\n", (1263, 1279), False, 'import pytest\n'), ((1315, 1343), 'pytest.fi...
import tensorflow as tf import numpy as np import input_data def sample_prob(probs): return tf.floor(probs + tf.random_uniform(tf.shape(probs), 0, 1)) # return tf.select((tf.random_uniform(tf.shape(probs), 0, 1) - probs) > 0.5, tf.ones(tf.shape(probs)), tf.zeros(tf.shape(probs))) learning_rate = 0.1 momentum ...
[ "tensorflow.initialize_all_variables", "tensorflow.shape", "tensorflow.transpose", "tensorflow.placeholder", "tensorflow.Session", "numpy.zeros", "tensorflow.matmul", "tensorflow.reduce_mean", "input_data.read_data_sets" ]
[((351, 405), 'input_data.read_data_sets', 'input_data.read_data_sets', (['"""MNIST_data/"""'], {'one_hot': '(True)'}), "('MNIST_data/', one_hot=True)\n", (376, 405), False, 'import input_data\n'), ((436, 472), 'tensorflow.placeholder', 'tf.placeholder', (['"""float"""', '[None, 784]'], {}), "('float', [None, 784])\n",...
import numpy as np import pandas as pd from copy import deepcopy def super_str(x): if isinstance(x,np.int64): x=float(x) if isinstance(x,int): x=float(x) ans=str(x) return ans def convert_to_array(x): if isinstance(x, np.ndarray): return x else: return np.a...
[ "pandas.DataFrame", "numpy.array", "copy.deepcopy" ]
[((2333, 2354), 'pandas.DataFrame', 'pd.DataFrame', (['pd_dict'], {}), '(pd_dict)\n', (2345, 2354), True, 'import pandas as pd\n'), ((316, 327), 'numpy.array', 'np.array', (['x'], {}), '(x)\n', (324, 327), True, 'import numpy as np\n'), ((2442, 2453), 'numpy.array', 'np.array', (['X'], {}), '(X)\n', (2450, 2453), True,...
""" Copyright 2018 <NAME> Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing...
[ "matplotlib.pyplot.ylabel", "scipy.spatial.distance.pdist", "matplotlib.pyplot.xlabel", "matplotlib.pyplot.plot", "matplotlib.pyplot.colorbar", "numpy.argmax", "itertools.product", "nuart.clustering.DualVigilanceHypersphereART", "matplotlib.pyplot.figure", "numpy.zeros", "matplotlib.pyplot.matsh...
[((1214, 1262), 'numpy.loadtxt', 'np.loadtxt', (['"""data/csv/Target.csv"""'], {'delimiter': '""","""'}), "('data/csv/Target.csv', delimiter=',')\n", (1224, 1262), True, 'import numpy as np\n'), ((1351, 1363), 'matplotlib.pyplot.figure', 'plt.figure', ([], {}), '()\n', (1361, 1363), True, 'import matplotlib.pyplot as p...
from scipy.optimize import minimize import numpy as np import pylab as pl from mpl_toolkits.mplot3d import Axes3D import math def f(x): """ Function that returns x_0^2 + e^{0.5*x_0} + 10*sin(x_1) + x_1^2. """ return x[0] ** 2 + math.exp(0.5 * x[0]) + 10 * math.sin(x[1]) + x[1] ** 2 def fprime(x): """ The deri...
[ "pylab.close", "pylab.figure", "numpy.array", "numpy.linspace", "numpy.zeros", "math.cos", "numpy.meshgrid", "math.exp", "math.sin", "pylab.show" ]
[((581, 596), 'pylab.close', 'pl.close', (['"""all"""'], {}), "('all')\n", (589, 596), True, 'import pylab as pl\n'), ((613, 631), 'numpy.linspace', 'np.linspace', (['(-r)', 'r'], {}), '(-r, r)\n', (624, 631), True, 'import numpy as np\n'), ((642, 660), 'numpy.linspace', 'np.linspace', (['(-r)', 'r'], {}), '(-r, r)\n',...
from contextlib import contextmanager from copy import deepcopy from functools import partial import sys import warnings import numpy as np from numpy.testing import assert_equal import pytest from numpy.testing import assert_allclose from expyfun import ExperimentController, visual, _experiment_controller from expyf...
[ "expyfun._experiment_controller._get_dev_db", "numpy.testing.assert_equal", "numpy.random.rand", "numpy.array", "copy.deepcopy", "pytest.mark.timeout", "expyfun._utils.fake_mouse_click", "expyfun.ExperimentController", "numpy.testing.assert_allclose", "expyfun._utils._new_pyglet", "expyfun._util...
[((1042, 1089), 'pytest.mark.parametrize', 'pytest.mark.parametrize', (['"""ws"""', '[(2, 1), (1, 1)]'], {}), "('ws', [(2, 1), (1, 1)])\n", (1065, 1089), False, 'import pytest\n'), ((7380, 7403), 'pytest.mark.timeout', 'pytest.mark.timeout', (['(20)'], {}), '(20)\n', (7399, 7403), False, 'import pytest\n'), ((17843, 17...
import dgl from . import register_model, BaseModel import torch.nn as nn import numpy as np import dgl.nn.pytorch as dglnn import torch import torch.nn.functional as F @register_model('DMGI') class DMGI(BaseModel): r""" Description ----------- **Title:** Unsupervised Attributed Multiplex Network E...
[ "torch.nn.Sigmoid", "dgl.add_self_loop", "torch.nn.ReLU", "torch.mean", "torch.nn.init.xavier_uniform_", "torch.nn.Bilinear", "torch.stack", "dgl.metapath_reachable_graph", "torch.diag", "torch.nn.functional.dropout", "torch.nn.init.xavier_normal_", "torch.pow", "torch.nn.Linear", "torch.s...
[((3781, 3793), 'torch.nn.Sigmoid', 'nn.Sigmoid', ([], {}), '()\n', (3791, 3793), True, 'import torch.nn as nn\n'), ((4589, 4619), 'torch.nn.init.xavier_normal_', 'nn.init.xavier_normal_', (['self.H'], {}), '(self.H)\n', (4611, 4619), True, 'import torch.nn as nn\n'), ((11598, 11622), 'torch.stack', 'torch.stack', (['f...
# MIT License # # Copyright (c) 2019 <NAME>, <NAME>, <NAME>, <NAME>, <NAME> # # Permission is hereby granted, free of charge, to any person obtaining a copy # of this software and associated documentation files (the "Software"), to deal # in the Software without restriction, including without limitation the rights # to...
[ "PIL.Image.fromarray", "dpemu.filters.Constant", "dpemu.filters.Identity", "dpemu.filters.Subtraction", "numpy.array", "dpemu.nodes.Array" ]
[((1437, 1467), 'numpy.array', 'np.array', (['data'], {'dtype': 'np.uint8'}), '(data, dtype=np.uint8)\n', (1445, 1467), True, 'import numpy as np\n'), ((1506, 1534), 'PIL.Image.fromarray', 'Image.fromarray', (['data', '"""RGB"""'], {}), "(data, 'RGB')\n", (1521, 1534), False, 'from PIL import Image\n'), ((1585, 1592), ...
#!/usr/bin/env python # coding: utf-8 # In[2]: import numpy as np import pandas as pd import matplotlib.pyplot as plt import seaborn as sns sns.set() # # Importing dataset # 1.Since data is in form of excel file we have to use pandas read_excel to load the data. # # 2.After loading it is important to check the c...
[ "matplotlib.pyplot.ylabel", "sklearn.ensemble.ExtraTreesRegressor", "pandas.read_excel", "sklearn.metrics.r2_score", "pandas.to_datetime", "seaborn.set", "sklearn.ensemble.RandomForestRegressor", "seaborn.distplot", "matplotlib.pyplot.xlabel", "pandas.set_option", "numpy.linspace", "matplotlib...
[((144, 153), 'seaborn.set', 'sns.set', ([], {}), '()\n', (151, 153), True, 'import seaborn as sns\n'), ((755, 859), 'pandas.read_excel', 'pd.read_excel', (['"""/Users/dhanyashreegowda/Desktop/github/Flight-Fare-Prediction/Data_Train.xlsx"""'], {}), "(\n '/Users/dhanyashreegowda/Desktop/github/Flight-Fare-Prediction...
r""" Definition ---------- This model provides the form factor for an elliptical cylinder with a core-shell scattering length density profile. Thus this is a variation of the core-shell bicelle model, but with an elliptical cylinder for the core. Outer shells on the rims and flat ends may be of different thicknesses a...
[ "numpy.sin", "numpy.cos" ]
[((6560, 6573), 'numpy.cos', 'cos', (['(pi / 6.0)'], {}), '(pi / 6.0)\n', (6563, 6573), False, 'from numpy import inf, sin, cos, pi\n'), ((6579, 6592), 'numpy.sin', 'sin', (['(pi / 6.0)'], {}), '(pi / 6.0)\n', (6582, 6592), False, 'from numpy import inf, sin, cos, pi\n')]
# Copyright 2016-2020 The <NAME> at the California Institute of # Technology (Caltech), with support from the Paul Allen Family Foundation, # Google, & National Institutes of Health (NIH) under Grant U24CA224309-01. # All rights reserved. # # Licensed under a modified Apache License, Version 2.0 (the "License"); # you ...
[ "os.path.exists", "os.listdir", "os.makedirs", "os.path.join", "numpy.sum", "numpy.zeros", "os.path.isdir", "numpy.savez_compressed", "numpy.load", "json.dump" ]
[((5320, 5359), 'os.path.join', 'os.path.join', (['save_dir', '"""log_data.json"""'], {}), "(save_dir, 'log_data.json')\n", (5332, 5359), False, 'import os\n'), ((7507, 7622), 'numpy.zeros', 'np.zeros', (['(fov_len, slice_stack_len, num_crops, num_slices, row_crop_size,\n col_crop_size, 1)'], {'dtype': 'label_dtype'...
""" Uses generator functions to supply train/test with data. Image renderings and text are created on the fly each time. """ from itertools import groupby from tensorflow.keras.preprocessing.sequence import pad_sequences import handwritten_text_recognition.data.preproc as pp import h5py import numpy as np import unic...
[ "handwritten_text_recognition.data.preproc.text_standardize", "numpy.ceil", "itertools.groupby", "tensorflow.keras.preprocessing.sequence.pad_sequences", "numpy.asarray", "h5py.File", "unicodedata.normalize", "handwritten_text_recognition.data.preproc.normalization", "handwritten_text_recognition.da...
[((4678, 4697), 'numpy.asarray', 'np.asarray', (['encoded'], {}), '(encoded)\n', (4688, 4697), True, 'import numpy as np\n'), ((4900, 4928), 'handwritten_text_recognition.data.preproc.text_standardize', 'pp.text_standardize', (['decoded'], {}), '(decoded)\n', (4919, 4928), True, 'import handwritten_text_recognition.dat...
import numpy as np import infotheory class bcolors: HEADER = "\033[95m" OKBLUE = "\033[94m" OKGREEN = "\033[92m" TEST_HEADER = "\033[93m" FAIL = "\033[91m" ENDC = "\033[0m" BOLD = "\033[1m" UNDERLINE = "\033[4m" SUCCESS = bcolors.OKGREEN + "SUCCESS" + bcolors.ENDC FAILED = bcolors.FA...
[ "numpy.random.normal", "numpy.prod", "numpy.random.rand", "numpy.concatenate", "numpy.random.uniform", "infotheory.InfoTools", "numpy.round" ]
[((493, 528), 'numpy.round', 'np.round', (['result'], {'decimals': 'decimals'}), '(result, decimals=decimals)\n', (501, 528), True, 'import numpy as np\n'), ((542, 577), 'numpy.round', 'np.round', (['target'], {'decimals': 'decimals'}), '(target, decimals=decimals)\n', (550, 577), True, 'import numpy as np\n'), ((9607,...
# -*- coding: utf-8 -*- """ @author: clausmichele """ import time import tensorflow as tf import cv2 import numpy as np from tqdm import tqdm def SpatialCNN(input, is_training=False, output_channels=3, reuse=tf.AUTO_REUSE): with tf.variable_scope('block1',reuse=reuse): output = tf.layers.conv2d(input, 128, 3, padd...
[ "cv2.imwrite", "numpy.log10", "tensorflow.variable_scope", "tensorflow.placeholder", "tensorflow.train.Saver", "numpy.asarray", "tensorflow.nn.leaky_relu", "tensorflow.global_variables", "tensorflow.global_variables_initializer", "tensorflow.layers.conv2d", "tensorflow.train.get_checkpoint_state...
[((232, 272), 'tensorflow.variable_scope', 'tf.variable_scope', (['"""block1"""'], {'reuse': 'reuse'}), "('block1', reuse=reuse)\n", (249, 272), True, 'import tensorflow as tf\n'), ((284, 354), 'tensorflow.layers.conv2d', 'tf.layers.conv2d', (['input', '(128)', '(3)'], {'padding': '"""same"""', 'activation': 'tf.nn.rel...
import igraph as ig import numpy as np import random import time from collections import defaultdict, Counter, deque import itertools MAX_LENGTH = 1000 # maximum random walk length (hyperparameter) class RandomWalkSingleAttribute(object): def __init__(self, p_diff, p_same, jump, out, gpre, attr_name='single_attr'...
[ "random.choice", "numpy.random.randint", "collections.defaultdict", "random.random", "random.randint", "igraph.Graph" ]
[((549, 581), 'igraph.Graph', 'ig.Graph', ([], {'directed': 'self.directed'}), '(directed=self.directed)\n', (557, 581), True, 'import igraph as ig\n'), ((1121, 1138), 'collections.defaultdict', 'defaultdict', (['list'], {}), '(list)\n', (1132, 1138), False, 'from collections import defaultdict, Counter, deque\n'), ((1...
import numpy as np from skimage.io import imread # import pdb def add_patch(img,trigger): flag=False if img.max()>1.: img=img/255. flag=True if trigger.max()>1.: trigger=trigger/255. # x,y=np.random.randint(10,20,size=(2,)) x,y = np.random.choice([3, 28]), np.random.choice(...
[ "numpy.random.choice", "numpy.argwhere", "numpy.ones" ]
[((795, 825), 'numpy.argwhere', 'np.argwhere', (['(Y_train == source)'], {}), '(Y_train == source)\n', (806, 825), True, 'import numpy as np\n'), ((276, 301), 'numpy.random.choice', 'np.random.choice', (['[3, 28]'], {}), '([3, 28])\n', (292, 301), True, 'import numpy as np\n'), ((303, 328), 'numpy.random.choice', 'np.r...
import torch import torch.nn as nn from torch import optim import numpy as np import nltk class TreeRecursiveEduNN(nn.Module): def __init__(self, embed_dict, glove, embed_size, glove_size, hidden_size, use_relations=True): super(TreeRecursiveEduNN, self).__init__() self.glove = glove self.e...
[ "torch.tanh", "nltk.word_tokenize", "torch.nn.LSTM", "numpy.zeros", "torch.nn.Linear", "torch.FloatTensor", "torch.cat" ]
[((573, 618), 'torch.nn.Linear', 'nn.Linear', (['embed_size', 'hidden_size'], {'bias': '(True)'}), '(embed_size, hidden_size, bias=True)\n', (582, 618), True, 'import torch.nn as nn\n'), ((646, 693), 'torch.nn.Linear', 'nn.Linear', (['hidden_size', 'hidden_size'], {'bias': '(False)'}), '(hidden_size, hidden_size, bias=...
# -*- coding: utf-8 -*- import os, sys import numpy as np import itertools import matplotlib.pyplot as plt import torch import torch.nn.functional as F from pydaily import filesystem def get_slide_filenames(slides_dir): slide_list = [] svs_file_list = filesystem.find_ext_files(slides_dir, "svs") slide_li...
[ "numpy.ceil", "itertools.product", "os.path.splitext", "numpy.asarray", "torch.nn.functional.sigmoid", "numpy.zeros", "os.path.basename", "torch.squeeze", "pydaily.filesystem.find_ext_files", "numpy.arange" ]
[((263, 307), 'pydaily.filesystem.find_ext_files', 'filesystem.find_ext_files', (['slides_dir', '"""svs"""'], {}), "(slides_dir, 'svs')\n", (288, 307), False, 'from pydaily import filesystem\n'), ((400, 444), 'pydaily.filesystem.find_ext_files', 'filesystem.find_ext_files', (['slides_dir', '"""SVS"""'], {}), "(slides_d...
import os import pandas as pd import matplotlib.pyplot as plt import numpy as np datapath = '../util/stock_dfs/' def get_ticker(x): return x.split('/')[-1].split('.')[0] def ret(x, y): return np.log(y/x) def get_zscore(x): return (x -x.mean())/x.std() def make_inputs(filepath): D = pd.read_cs...
[ "os.listdir", "pandas.read_csv", "pandas.qcut", "numpy.log", "os.path.join", "pandas.Index", "numpy.exp", "pandas.DataFrame" ]
[((207, 220), 'numpy.log', 'np.log', (['(y / x)'], {}), '(y / x)\n', (213, 220), True, 'import numpy as np\n'), ((447, 461), 'pandas.DataFrame', 'pd.DataFrame', ([], {}), '()\n', (459, 461), True, 'import pandas as pd\n'), ((947, 961), 'pandas.DataFrame', 'pd.DataFrame', ([], {}), '()\n', (959, 961), True, 'import pand...
#! /usr/bin/env python # SPDX-FileCopyrightText: Copyright 2022, <NAME> <<EMAIL>> # SPDX-License-Identifier: BSD-3-Clause # SPDX-FileType: SOURCE # # This program is free software: you can redistribute it and/or modify it under # the terms of the license found in the LICENSE.txt file in the root directory # of this so...
[ "numpy.random.rand", "detkit.orthogonalize", "numpy.linalg.slogdet", "numpy.linalg.inv", "numpy.around", "detkit.loggdet" ]
[((644, 667), 'numpy.random.rand', 'numpy.random.rand', (['n', 'n'], {}), '(n, n)\n', (661, 667), False, 'import numpy\n'), ((676, 699), 'numpy.random.rand', 'numpy.random.rand', (['n', 'm'], {}), '(n, m)\n', (693, 699), False, 'import numpy\n'), ((909, 932), 'numpy.linalg.slogdet', 'numpy.linalg.slogdet', (['A'], {}),...