code
stringlengths
31
1.05M
apis
list
extract_api
stringlengths
97
1.91M
import argparse import csv import numpy as np from imbDRL.metrics import classification_metrics from sklearn.model_selection import train_test_split from tensorflow.keras import backend from tensorflow.keras.layers import (Concatenate, Conv2D, Dense, Dropout, Flatten, Input, MaxPoo...
[ "csv.DictWriter", "numpy.column_stack", "numpy.isin", "tensorflow.keras.utils.plot_model", "tensorflow.keras.layers.Dense", "tensorflow.keras.metrics.Recall", "numpy.arange", "tensorflow.keras.layers.Input", "tensorflow.keras.layers.Conv2D", "argparse.ArgumentParser", "tensorflow.keras.models.Mo...
[((676, 764), 'argparse.ArgumentParser', 'argparse.ArgumentParser', ([], {'description': '"""Generates tf.dataset based on Path argument."""'}), "(description=\n 'Generates tf.dataset based on Path argument.')\n", (699, 764), False, 'import argparse\n'), ((1143, 1175), 'histology_preprocessing.generate_dataset', 'ge...
import unittest import numpy as np from radbm.utils.torch import torch_cast_cpu class TorchCast(unittest.TestCase): def test_torch_cast_cpu(self): a = np.zeros((4,5), dtype=np.float32) b = torch_cast_cpu(a) self.assertTrue((a==b.numpy()).all())
[ "radbm.utils.torch.torch_cast_cpu", "numpy.zeros" ]
[((164, 198), 'numpy.zeros', 'np.zeros', (['(4, 5)'], {'dtype': 'np.float32'}), '((4, 5), dtype=np.float32)\n', (172, 198), True, 'import numpy as np\n'), ((210, 227), 'radbm.utils.torch.torch_cast_cpu', 'torch_cast_cpu', (['a'], {}), '(a)\n', (224, 227), False, 'from radbm.utils.torch import torch_cast_cpu\n')]
import gzip import pickle import json import torch import numpy as np import os from os.path import join from tqdm import tqdm from numpy.random import shuffle from envs import DATASET_FOLDER IGNORE_INDEX = -100 def get_cached_filename(f_type, config): assert f_type in ['examples', 'features', '...
[ "gzip.open", "torch.LongTensor", "torch.Tensor", "os.path.join", "pickle.load", "torch.from_numpy", "torch.zeros_like", "torch.FloatTensor", "numpy.random.shuffle" ]
[((5897, 5944), 'torch.LongTensor', 'torch.LongTensor', (['self.bsz', 'self.max_seq_length'], {}), '(self.bsz, self.max_seq_length)\n', (5913, 5944), False, 'import torch\n'), ((5969, 6016), 'torch.LongTensor', 'torch.LongTensor', (['self.bsz', 'self.max_seq_length'], {}), '(self.bsz, self.max_seq_length)\n', (5985, 60...
# Copyright (c) 2021 PaddlePaddle Authors. All Rights Reserved. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by appli...
[ "numpy.abs", "argparse.ArgumentParser", "pathlib.Path", "concurrent.futures.ThreadPoolExecutor", "logging.warning", "jsonlines.open", "librosa.time_to_samples", "parakeet.data.get_feats.LogMelFBank", "config.get_cfg_default", "librosa.get_duration", "praatio.tgio.openTextgrid", "operator.itemg...
[((1485, 1515), 'librosa.get_duration', 'librosa.get_duration', (['y'], {'sr': 'sr'}), '(y, sr=sr)\n', (1505, 1515), False, 'import librosa\n'), ((1576, 1607), 'praatio.tgio.openTextgrid', 'tgio.openTextgrid', (['alignment_fp'], {}), '(alignment_fp)\n', (1593, 1607), False, 'from praatio import tgio\n'), ((2260, 2315),...
# -*- coding: utf-8 -*- from __future__ import print_function, division, unicode_literals import argparse import os import numpy as np import math from collections import defaultdict, Counter import pdb """ This script processes an input text file to produce data in binary format to be used with the autoencoder (bin...
[ "os.path.exists", "numpy.savez", "numpy.random.get_state", "numpy.random.set_state", "math.ceil", "argparse.ArgumentParser", "os.makedirs", "os.path.join", "collections.Counter", "numpy.array", "numpy.empty", "collections.defaultdict", "numpy.full", "numpy.random.shuffle" ]
[((689, 698), 'collections.Counter', 'Counter', ([], {}), '()\n', (696, 698), False, 'from collections import defaultdict, Counter\n'), ((718, 727), 'collections.Counter', 'Counter', ([], {}), '()\n', (725, 727), False, 'from collections import defaultdict, Counter\n'), ((1636, 1668), 'collections.defaultdict', 'defaul...
from dataclasses import dataclass import random from typing_extensions import Self import numpy as np from nn.layers.base import BaseLayer @dataclass() class Dense(BaseLayer): """A layer, where each input is connected to all outputs.""" weights: np.ndarray biases: np.ndarray def __init__(self, inpu...
[ "numpy.random.random", "dataclasses.dataclass", "numpy.ndindex", "numpy.dot", "numpy.random.randn" ]
[((143, 154), 'dataclasses.dataclass', 'dataclass', ([], {}), '()\n', (152, 154), False, 'from dataclasses import dataclass\n'), ((503, 544), 'numpy.random.randn', 'np.random.randn', (['neuron_count', 'input_size'], {}), '(neuron_count, input_size)\n', (518, 544), True, 'import numpy as np\n'), ((567, 599), 'numpy.rand...
import sys import cv2 import numpy as np import torch from models import Resnet18_gray def detect_keypoints(img_size, save=False): # capture image from camera cap = cv2.VideoCapture(-1) width = int(cap.get(3)) height = int(cap.get(4)) fps = int(cap.get(5)) ## load models # face detecto...
[ "models.Resnet18_gray", "cv2.flip", "cv2.line", "cv2.imshow", "cv2.destroyAllWindows", "cv2.VideoCapture", "cv2.cvtColor", "cv2.VideoWriter_fourcc", "cv2.CascadeClassifier", "cv2.resize", "cv2.waitKey", "numpy.round", "torch.device" ]
[((178, 198), 'cv2.VideoCapture', 'cv2.VideoCapture', (['(-1)'], {}), '(-1)\n', (194, 198), False, 'import cv2\n'), ((341, 429), 'cv2.CascadeClassifier', 'cv2.CascadeClassifier', (['"""detector_architectures/haarcascade_frontalface_default.xml"""'], {}), "(\n 'detector_architectures/haarcascade_frontalface_default.x...
#!/usr/bin/env python # computeKMeans.py: python code to compute kmeans clusters from # tshirt point cloud data # Requirements: baxter SDK installed and required libraries installed # Author: <NAME> # Date: 2015/10/18 # Source: sklearn tutorial on kmeans clustering # import basic linear algebra and plotting libraries...
[ "sklearn.cluster.KMeans", "argparse.ArgumentParser", "numpy.array", "numpy.empty", "numpy.savetxt" ]
[((685, 758), 'argparse.ArgumentParser', 'argparse.ArgumentParser', ([], {'formatter_class': 'argFmt', 'description': 'main.__doc__'}), '(formatter_class=argFmt, description=main.__doc__)\n', (708, 758), False, 'import argparse\n'), ((1454, 1541), 'sklearn.cluster.KMeans', 'KMeans', ([], {'n_clusters': 'clusterNum', 'i...
# Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by app...
[ "numpy.allclose", "paddle.fluid.data", "numpy.random.rand", "paddle.allclose", "paddle.enable_static", "numpy.array", "paddle.disable_static", "paddle.to_tensor", "unittest.main", "paddle.static.Program" ]
[((4519, 4534), 'unittest.main', 'unittest.main', ([], {}), '()\n', (4532, 4534), False, 'import unittest\n'), ((2567, 2590), 'paddle.disable_static', 'paddle.disable_static', ([], {}), '()\n', (2588, 2590), False, 'import paddle\n'), ((2608, 2630), 'numpy.random.rand', 'np.random.rand', (['(10)', '(10)'], {}), '(10, 1...
from rdkit import Chem from rdkit.Chem import AllChem, Descriptors import numpy as np from rdkit.ML.Descriptors import MoleculeDescriptors from sklearn import preprocessing import random from hyperopt import tpe, fmin, Trials from sklearn.metrics import average_precision_score, roc_auc_score from sklearn.model_selectio...
[ "hyperopt.fmin", "numpy.mean", "random.sample", "sklearn.metrics.average_precision_score", "rdkit.Chem.AllChem.GetMorganFingerprintAsBitVect", "sklearn.metrics.roc_auc_score", "sklearn.model_selection.StratifiedKFold", "numpy.array", "datetime.datetime.now", "imxgboost.imbalance_xgb.imbalance_xgbo...
[((456, 514), 'warnings.filterwarnings', 'warnings.filterwarnings', (['"""ignore"""'], {'category': 'RuntimeWarning'}), "('ignore', category=RuntimeWarning)\n", (479, 514), False, 'import warnings\n'), ((830, 864), 'numpy.array', 'np.array', (['Morgan'], {'dtype': 'np.float32'}), '(Morgan, dtype=np.float32)\n', (838, 8...
import numpy as np import pygame import sys import os from collisionutils import * from colors import * from utilutils import * from chassis import AutoPathFollower, RobotDrive import initObstacles os.chdir(os.path.dirname(os.path.realpath(__file__))) size = (1340, 684) def allDisplay(obstacles, screen): display...
[ "numpy.sqrt", "pygame.init", "pygame.quit", "chassis.AutoPathFollower", "pygame.draw.line", "pygame.display.set_mode", "pygame.event.get", "pygame.display.flip", "pygame.draw.polygon", "numpy.random.rand", "os.path.realpath", "pygame.key.get_pressed", "pygame.draw.rect", "chassis.RobotDriv...
[((3155, 3168), 'pygame.init', 'pygame.init', ([], {}), '()\n', (3166, 3168), False, 'import pygame\n'), ((3178, 3207), 'pygame.display.set_mode', 'pygame.display.set_mode', (['size'], {}), '(size)\n', (3201, 3207), False, 'import pygame\n'), ((3235, 3254), 'pygame.time.Clock', 'pygame.time.Clock', ([], {}), '()\n', (3...
#!/usr/bin/env python3 import sys import argparse import numpy as np from qcore.timeseries import BBSeis from qcore.timeseries import HFSeis # the ratio of allowed zero's before being flagged as failed, 0.01 = 1% ZERO_COUNT_THRESHOLD = 0.01 if __name__ == "__main__": parser = argparse.ArgumentParser() parse...
[ "numpy.trim_zeros", "sys.exit", "argparse.ArgumentParser", "numpy.count_nonzero", "numpy.min" ]
[((285, 310), 'argparse.ArgumentParser', 'argparse.ArgumentParser', ([], {}), '()\n', (308, 310), False, 'import argparse\n'), ((3419, 3430), 'sys.exit', 'sys.exit', (['(0)'], {}), '(0)\n', (3427, 3430), False, 'import sys\n'), ((749, 760), 'sys.exit', 'sys.exit', (['(1)'], {}), '(1)\n', (757, 760), False, 'import sys\...
import numpy as np import matplotlib.pyplot as plt def insert_zeros(trace, tt=None): """Insert zero locations in data trace and tt vector based on linear fit""" if tt is None: tt = np.arange(len(trace)) # Find zeros zc_idx = np.where(np.diff(np.signbit(trace)))[0] x1 = tt[zc_idx] x2...
[ "numpy.signbit", "matplotlib.pyplot.gca", "numpy.diff", "numpy.array", "numpy.split", "numpy.zeros", "numpy.std", "numpy.random.randn", "numpy.arange", "matplotlib.pyplot.show" ]
[((485, 509), 'numpy.split', 'np.split', (['tt', '(zc_idx + 1)'], {}), '(tt, zc_idx + 1)\n', (493, 509), True, 'import numpy as np\n'), ((528, 555), 'numpy.split', 'np.split', (['trace', '(zc_idx + 1)'], {}), '(trace, zc_idx + 1)\n', (536, 555), True, 'import numpy as np\n'), ((3615, 3624), 'matplotlib.pyplot.gca', 'pl...
import streamlit as st from streamlit_agraph import agraph, Node, Edge, Config import pandas as pd import numpy as np @st.cache(suppress_st_warning=True) def get_graph(file): nodes = [] edges = [] df = pd.read_csv(file) for x in np.unique(df[["Source", "Target"]].values): nodes.append(Node(id=...
[ "streamlit_agraph.Node", "streamlit.cache", "numpy.unique", "pandas.read_csv", "streamlit_agraph.agraph", "streamlit_agraph.Config", "streamlit_agraph.Edge" ]
[((120, 154), 'streamlit.cache', 'st.cache', ([], {'suppress_st_warning': '(True)'}), '(suppress_st_warning=True)\n', (128, 154), True, 'import streamlit as st\n'), ((216, 233), 'pandas.read_csv', 'pd.read_csv', (['file'], {}), '(file)\n', (227, 233), True, 'import pandas as pd\n'), ((247, 289), 'numpy.unique', 'np.uni...
import pandas as pd import joblib import numpy as np import argparse import os # Inputs: # --sct_train_file: Pickle file that was holds the a list of the dataset used for training. # Can be downloaded at: https://github.com/sct-data/deepseg_sc_models # train_valid_test column: 1 fo...
[ "pandas.read_pickle", "argparse.ArgumentParser", "numpy.in1d", "pandas.merge", "os.path.join" ]
[((1937, 1969), 'pandas.read_pickle', 'pd.read_pickle', (['dataset_sct_file'], {}), '(dataset_sct_file)\n', (1951, 1969), True, 'import pandas as pd\n'), ((3618, 3643), 'argparse.ArgumentParser', 'argparse.ArgumentParser', ([], {}), '()\n', (3641, 3643), False, 'import argparse\n'), ((1159, 1214), 'os.path.join', 'os.p...
# Copyright 2016-present CERN – European Organization for Nuclear Research # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2...
[ "numpy.reshape", "numpy.testing.assert_equal", "qf_lib.backtesting.events.time_event.regular_time_event.market_close_event.MarketCloseEvent.trigger_time", "qf_lib.backtesting.events.time_event.regular_time_event.market_open_event.MarketOpenEvent.trigger_time", "numpy.testing.assert_almost_equal", "qf_lib....
[((1505, 1563), 'qf_lib.common.utils.dateutils.string_to_date.str_to_date', 'str_to_date', (['"""2014-12-25 00:00:00.00"""', 'DateFormat.FULL_ISO'], {}), "('2014-12-25 00:00:00.00', DateFormat.FULL_ISO)\n", (1516, 1563), False, 'from qf_lib.common.utils.dateutils.string_to_date import str_to_date\n'), ((1584, 1642), 'q...
import numpy as np import scipy from scipy import stats from networkx.algorithms import bipartite import scipy.linalg as la from numpy.linalg import matrix_rank, norm import community from community import community_louvain import pandas as pd import copy def ger_matrix_from_poly(model, dataset, poly_m): # L_m...
[ "networkx.algorithms.bipartite.average_clustering", "numpy.multiply", "community.community_louvain.best_partition", "numpy.unique", "community.modularity", "pandas.DataFrame", "numpy.where", "numpy.linalg.norm", "numpy.argmax", "numpy.array", "numpy.zeros", "copy.deepcopy", "numpy.linalg.svd...
[((530, 547), 'numpy.unique', 'np.unique', (['poly_m'], {}), '(poly_m)\n', (539, 547), True, 'import numpy as np\n'), ((2259, 2284), 'numpy.argmax', 'np.argmax', (['preds'], {'axis': '(-1)'}), '(preds, axis=-1)\n', (2268, 2284), True, 'import numpy as np\n'), ((3189, 3244), 'numpy.linalg.svd', 'np.linalg.svd', (['m'], ...
from distutils.core import setup from Cython.Build import cythonize import numpy setup(ext_modules = cythonize('chimeramate_main.pyx'),include_dirs=[numpy.get_include()])
[ "Cython.Build.cythonize", "numpy.get_include" ]
[((102, 135), 'Cython.Build.cythonize', 'cythonize', (['"""chimeramate_main.pyx"""'], {}), "('chimeramate_main.pyx')\n", (111, 135), False, 'from Cython.Build import cythonize\n'), ((150, 169), 'numpy.get_include', 'numpy.get_include', ([], {}), '()\n', (167, 169), False, 'import numpy\n')]
#!/usr/bin/python3 from src import storage_connection as sc import numpy as np """ Last edited by : Shawn Last edited time : 29/11/2021 Version Status: dev TO DO: The functions in this file are for reading and preparing the inputs for the NN. Required: Path to NN_input.txt Path to vector.csv """ def get_...
[ "numpy.array", "src.storage_connection.storage_connection_sequence", "src.storage_connection.storage_connection_embedding" ]
[((587, 659), 'src.storage_connection.storage_connection_embedding', 'sc.storage_connection_embedding', (['credential_path', '"""pca_lookup_table.csv"""'], {}), "(credential_path, 'pca_lookup_table.csv')\n", (618, 659), True, 'from src import storage_connection as sc\n'), ((708, 771), 'src.storage_connection.storage_co...
#!/usr/bin/python2 # -*- coding: utf-8 -*- import os os.environ['TF_CPP_MIN_LOG_LEVEL'] = '2' import glob, csv, librosa, os, subprocess, time import numpy as np import pandas as pd import data_vn try: from StringIO import StringIO except ImportError: from io import StringIO __author__ = '<EMAIL>' # data ...
[ "os.path.exists", "data_vn.str2index", "os.makedirs", "csv.writer", "librosa.feature.mfcc", "pandas.read_table", "data_vn.index2str", "numpy.save", "librosa.load" ]
[((516, 551), 'csv.writer', 'csv.writer', (['csv_file'], {'delimiter': '""","""'}), "(csv_file, delimiter=',')\n", (526, 551), False, 'import glob, csv, librosa, os, subprocess, time\n'), ((646, 737), 'pandas.read_table', 'pd.read_table', (['content_filename'], {'usecols': "['ID']", 'index_col': '(False)', 'delim_white...
# copyright (c) 2021 PaddlePaddle Authors. All Rights Reserve. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applica...
[ "numpy.clip", "PIL.Image.fromarray", "random.randint", "random.shuffle", "tools.infer.utility.get_rotate_crop_image", "numpy.array", "numpy.deg2rad", "numpy.random.randint", "shapely.geometry.Polygon", "numpy.cos", "cv2.cvtColor", "numpy.sin", "cv2.getRotationMatrix2D", "ppocr.data.imaug.r...
[((5747, 5764), 'numpy.deg2rad', 'np.deg2rad', (['angle'], {}), '(angle)\n', (5757, 5764), True, 'import numpy as np\n'), ((5901, 5960), 'cv2.getRotationMatrix2D', 'cv2.getRotationMatrix2D', (['(nw * 0.5, nh * 0.5)', 'angle', 'scale'], {}), '((nw * 0.5, nh * 0.5), angle, scale)\n', (5924, 5960), False, 'import cv2\n'),...
#%% import random import matplotlib.pyplot as plt import tensorflow as tf import tensorflow.keras as keras import seaborn as sns import numpy as np import pickle from sklearn.model_selection import StratifiedKFold from math import log2, ceil import sys sys.path.append("../src/") from lifelong_dnn import LifeLongDN...
[ "numpy.eye", "matplotlib.pyplot.savefig", "numpy.ones", "seaborn.color_palette", "numpy.sin", "pickle.load", "numpy.array", "matplotlib.pyplot.figure", "numpy.zeros", "numpy.random.uniform", "numpy.random.seed", "numpy.concatenate", "matplotlib.pyplot.tight_layout", "numpy.cos", "numpy.c...
[((258, 284), 'sys.path.append', 'sys.path.append', (['"""../src/"""'], {}), "('../src/')\n", (273, 284), False, 'import sys\n'), ((2427, 2463), 'numpy.concatenate', 'np.concatenate', (['(n1s, n2s + n1s[-1])'], {}), '((n1s, n2s + n1s[-1]))\n', (2441, 2463), True, 'import numpy as np\n'), ((2598, 2635), 'seaborn.color_p...
"""(Non-central) F distribution.""" import numpy from scipy import special from ..baseclass import Dist from ..operators.addition import Add class f(Dist): """F distribution.""" def __init__(self, dfn, dfd, nc): Dist.__init__(self, dfn=dfn, dfd=dfd, nc=nc) def _pdf(self, x, dfn, dfd, nc): ...
[ "scipy.special.ncfdtr", "scipy.special.assoc_laguerre", "scipy.special.beta", "numpy.exp", "scipy.special.ncfdtri", "scipy.special.gammaln" ]
[((451, 483), 'scipy.special.gammaln', 'special.gammaln', (['((n1 + n2) / 2.0)'], {}), '((n1 + n2) / 2.0)\n', (466, 483), False, 'from scipy import special\n'), ((492, 507), 'numpy.exp', 'numpy.exp', (['term'], {}), '(term)\n', (501, 507), False, 'import numpy\n'), ((616, 704), 'scipy.special.assoc_laguerre', 'special....
from unittest import TestCase, mock import layers import numpy as np import pytest class TestPoolForward(TestCase): def test_max(self): pool = layers.pool.Pool( size=2, stride=2, operation=np.max, ) data = np.zeros((4, 4, 3)) data[:,:,0] = np....
[ "numpy.array", "numpy.zeros", "layers.pool.Pool" ]
[((159, 211), 'layers.pool.Pool', 'layers.pool.Pool', ([], {'size': '(2)', 'stride': '(2)', 'operation': 'np.max'}), '(size=2, stride=2, operation=np.max)\n', (175, 211), False, 'import layers\n'), ((275, 294), 'numpy.zeros', 'np.zeros', (['(4, 4, 3)'], {}), '((4, 4, 3))\n', (283, 294), True, 'import numpy as np\n'), (...
from copy import deepcopy import numpy as np from numpy.lib.npyio import _savez from matplotlib.collections import LineCollection import matplotlib.pyplot as plt from seispy.trace import Trace, FourierDomainTrace from seispy.errors import EmptyStreamError, DataTypeError, \ SamplingError, SamplingRateError, NptsErro...
[ "numpy.random.rand", "numpy.hstack", "numpy.column_stack", "matplotlib.collections.LineCollection", "numpy.argsort", "numpy.array", "copy.deepcopy", "seispy.errors.EmptyStreamError", "numpy.arange", "obspy.core.stream.Stream", "numpy.lib.npyio._savez", "numpy.asarray", "numpy.max", "numpy....
[((18253, 18263), 'matplotlib.pyplot.show', 'plt.show', ([], {}), '()\n', (18261, 18263), True, 'import matplotlib.pyplot as plt\n'), ((1020, 1034), 'copy.deepcopy', 'deepcopy', (['self'], {}), '(self)\n', (1028, 1034), False, 'from copy import deepcopy\n'), ((2048, 2073), 'obspy.core.stream.Stream', 'ObspyStream', (['...
import os import sys import _pickle as pickle import numpy as np import tensorflow as tf import chess.pgn import pgn_tensors_utils import bz2 def read_data(data_path, num_valids=20000): print("-" * 80) print("Reading data") nb_games = 200 #nb_games = sys.maxsize boards, labels, results = {}, {}, {} train...
[ "numpy.reshape", "numpy.asarray", "os.path.join", "os.path.isfile", "numpy.concatenate", "pgn_tensors_utils.tensors_labels_from_games", "numpy.transpose" ]
[((1321, 1345), 'os.path.isfile', 'os.path.isfile', (['bz2_path'], {}), '(bz2_path)\n', (1335, 1345), False, 'import os\n'), ((1652, 1676), 'os.path.isfile', 'os.path.isfile', (['pgn_path'], {}), '(pgn_path)\n', (1666, 1676), False, 'import os\n'), ((4081, 4100), 'numpy.asarray', 'np.asarray', (['tensors'], {}), '(tens...
import numpy as np from toolkit.methods.pnpl import CvxPnPL, DLT, EPnPL, OPnPL from toolkit.suites import parse_arguments, PnPLReal from toolkit.datasets import Linemod, Occlusion # reproducibility is a great thing np.random.seed(0) np.random.seed(42) # parse console arguments args = parse_arguments() # Just a lo...
[ "toolkit.suites.PnPLReal.load", "toolkit.datasets.Linemod", "numpy.random.seed", "toolkit.suites.parse_arguments", "toolkit.suites.PnPLReal", "toolkit.datasets.Occlusion" ]
[((218, 235), 'numpy.random.seed', 'np.random.seed', (['(0)'], {}), '(0)\n', (232, 235), True, 'import numpy as np\n'), ((236, 254), 'numpy.random.seed', 'np.random.seed', (['(42)'], {}), '(42)\n', (250, 254), True, 'import numpy as np\n'), ((290, 307), 'toolkit.suites.parse_arguments', 'parse_arguments', ([], {}), '()...
import pandas as pd import numpy as np import time from datetime import timedelta, date, datetime class TransformData(object): def __init__(self): pass # get data and preprocessing def format_timestamp(self, utc_datetime): now_timestamp = time.time() offset = datetime.fromtimestamp...
[ "datetime.datetime.utcfromtimestamp", "datetime.datetime.fromtimestamp", "numpy.around", "time.time", "pandas.to_datetime" ]
[((269, 280), 'time.time', 'time.time', ([], {}), '()\n', (278, 280), False, 'import time\n'), ((298, 335), 'datetime.datetime.fromtimestamp', 'datetime.fromtimestamp', (['now_timestamp'], {}), '(now_timestamp)\n', (320, 335), False, 'from datetime import timedelta, date, datetime\n'), ((338, 378), 'datetime.datetime.u...
''' @Author: <NAME> @Github: https://github.com/wsustcid @Version: 1.0.0 @Date: 2020-09-11 23:42:23 @LastEditTime: 2020-10-13 22:32:20 ''' import os import sys import argparse from datetime import datetime import time from tqdm import tqdm import time import numpy as np import tensorflow as tf base_dir = os.path.dir...
[ "numpy.hstack", "sys.path.append", "data_gen.DataLoader", "tensorflow.Graph", "argparse.ArgumentParser", "tensorflow.placeholder", "tensorflow.Session", "numpy.concatenate", "tensorflow.ConfigProto", "numpy.square", "models.flowdrivenet.FlowDriveNet", "time.time", "tensorflow.minimum", "ut...
[((352, 377), 'sys.path.append', 'sys.path.append', (['base_dir'], {}), '(base_dir)\n', (367, 377), False, 'import sys\n'), ((503, 528), 'argparse.ArgumentParser', 'argparse.ArgumentParser', ([], {}), '()\n', (526, 528), False, 'import argparse\n'), ((2181, 2226), 'os.path.join', 'os.path.join', (['base_dir', '"""logs"...
import numpy as np fwhm_m = 2 * np.sqrt(2 * np.log(2)) def fwhm(sigma): """ Get full width at half maximum (FWHM) for a provided sigma / standard deviation, assuming a Gaussian distribution. """ return fwhm_m * sigma def gaussian(x_mean, x_std, shape): return np.random.normal(x_mean, x_...
[ "numpy.random.normal", "numpy.random.chisquare", "numpy.log" ]
[((293, 331), 'numpy.random.normal', 'np.random.normal', (['x_mean', 'x_std', 'shape'], {}), '(x_mean, x_std, shape)\n', (309, 331), True, 'import numpy as np\n'), ((45, 54), 'numpy.log', 'np.log', (['(2)'], {}), '(2)\n', (51, 54), True, 'import numpy as np\n'), ((909, 952), 'numpy.random.chisquare', 'np.random.chisqua...
import time import numpy as np from sklearn.preprocessing import OneHotEncoder, MinMaxScaler from sklearn.gaussian_process import GaussianProcess from sklearn.linear_model import Ridge, Lasso from sklearn.svm import NuSVR, SVR import scipy from util import Logger, get_rmse class Linear(): def __init_...
[ "sklearn.linear_model.Lasso", "numpy.hstack", "sklearn.preprocessing.OneHotEncoder", "sklearn.linear_model.Ridge", "numpy.array", "scipy.sparse.hstack", "numpy.vstack", "sklearn.svm.NuSVR", "sklearn.svm.SVR", "sklearn.preprocessing.MinMaxScaler" ]
[((1141, 1189), 'numpy.hstack', 'np.hstack', (['(m[:, 23:24], m[:, 37:38], m[:, 52:])'], {}), '((m[:, 23:24], m[:, 37:38], m[:, 52:]))\n', (1150, 1189), True, 'import numpy as np\n'), ((1474, 1491), 'numpy.array', 'np.array', (['train_X'], {}), '(train_X)\n', (1482, 1491), True, 'import numpy as np\n'), ((1516, 1533), ...
#!/usr/bin/env python3 from __future__ import print_function import argparse import glob import sys import matplotlib.pyplot as plt import pysam import collections import numpy as np import os OUTPUT_LOG_FILE_NAME = None HP_TAG = "HP" UNCLASSIFIED = 'u' IN_CIS = 'c' IN_TRANS = 't' UNKNOWN = 'k' def parse_args(args =...
[ "numpy.mean", "numpy.median", "matplotlib.pyplot.savefig", "argparse.ArgumentParser", "matplotlib.pyplot.close", "collections.defaultdict", "os.path.basename", "numpy.std", "matplotlib.pyplot.cm.get_cmap", "matplotlib.pyplot.subplots", "matplotlib.pyplot.show" ]
[((341, 462), 'argparse.ArgumentParser', 'argparse.ArgumentParser', (['"""Compares phasing for haplotagged reads. Calculates local accuracy and switch errors"""'], {}), "(\n 'Compares phasing for haplotagged reads. Calculates local accuracy and switch errors'\n )\n", (364, 462), False, 'import argparse\n'), ((4...
from sklearn.ensemble import RandomForestRegressor from sklearn.datasets import make_regression import pandas as pd import numpy as np from sklearn import preprocessing from sklearn.model_selection import train_test_split import numpy as np, tensorflow as tf from sklearn.preprocessing import OneHotEncoder impor...
[ "sklearn.model_selection.GridSearchCV", "pandas.read_csv", "numpy.array", "copy.deepcopy", "xgboost.sklearn.XGBRegressor", "sklearn.gaussian_process.GaussianProcessRegressor", "sklearn.ensemble.RandomForestRegressor", "numpy.asarray", "numpy.diff", "numpy.concatenate", "pyflux.ARIMAX", "pandas...
[((3779, 3809), 'numpy.array', 'np.array', (['[]'], {'dtype': 'np.float32'}), '([], dtype=np.float32)\n', (3787, 3809), True, 'import numpy as np, tensorflow as tf\n'), ((3833, 3863), 'numpy.array', 'np.array', (['[]'], {'dtype': 'np.float32'}), '([], dtype=np.float32)\n', (3841, 3863), True, 'import numpy as np, tenso...
import os, sys def _assert_file_path(file_path): assert os.path.isfile(file_path), "no such file: {}".format(file_path) try: import numpy as np import torch # ============================================= # Bokeh server - main runnable script # ============================================= ...
[ "bokeh.layouts.column", "bokeh.layouts.row", "multimodal_affinities.bokeh_server.visualization_widget.VisualizationWidget", "multimodal_affinities.bokeh_server.bokeh_logger.BokehLogger", "bokeh.models.widgets.Button", "bokeh.models.widgets.CheckboxGroup", "multimodal_affinities.pipeline.algorithm_api.Co...
[((61, 86), 'os.path.isfile', 'os.path.isfile', (['file_path'], {}), '(file_path)\n', (75, 86), False, 'import os, sys\n'), ((402, 426), 'sys.path.append', 'sys.path.append', (['SRC_DIR'], {}), '(SRC_DIR)\n', (417, 426), False, 'import os, sys\n'), ((682, 703), 'matplotlib.use', 'matplotlib.use', (['"""Agg"""'], {}), "...
import pytest import numpy as np from engine.base_classes import Location, AbsLoc, RelLoc @pytest.fixture(params=[ [1, 2], [[2, 3]], (3, 3), [(3, 4)], [(3, 3), (4, 4)], np.random.randint(0, 10, (5, 2))]) def coord2d(request): return request.param @pytest.fixture def loc2d(coord2d): return Location(c...
[ "numpy.ones", "engine.base_classes.Location", "numpy.array", "numpy.random.randint", "pytest.raises", "pytest.fixture", "engine.base_classes.Location.intersect", "engine.base_classes.Location.intersect_mask" ]
[((331, 369), 'pytest.fixture', 'pytest.fixture', ([], {'params': '[1, 2, 3, 4, 5]'}), '(params=[1, 2, 3, 4, 5])\n', (345, 369), False, 'import pytest\n'), ((310, 327), 'engine.base_classes.Location', 'Location', (['coord2d'], {}), '(coord2d)\n', (318, 327), False, 'from engine.base_classes import Location, AbsLoc, Rel...
# coding: utf-8 # import networkx as nx # import matplotlib.pyplot as plt # import operator # from collections import defaultdict # from collections import Counter # from collections import deque # from functools import reduce # from math import log # from itertools import combinations, permutations, product import pic...
[ "timeit.default_timer", "numpy.asarray", "numpy.argmax" ]
[((2778, 2785), 'timeit.default_timer', 'timer', ([], {}), '()\n', (2783, 2785), True, 'from timeit import default_timer as timer\n'), ((2835, 2842), 'timeit.default_timer', 'timer', ([], {}), '()\n', (2840, 2842), True, 'from timeit import default_timer as timer\n'), ((531, 556), 'numpy.asarray', 'np.asarray', (['ii']...
import os import numpy as np import matplotlib.pyplot as plt from . import helper_generic as hlp from . import helper_site_response as sr from . import helper_signal_processing as sig from PySeismoSoil.class_frequency_spectrum import Frequency_Spectrum as FS from PySeismoSoil.class_Vs_profile import Vs_Profile class...
[ "numpy.mean", "numpy.abs", "matplotlib.pyplot.plot", "numpy.column_stack", "os.path.split", "numpy.linspace", "numpy.zeros", "matplotlib.pyplot.figure", "PySeismoSoil.class_frequency_spectrum.Frequency_Spectrum", "numpy.savetxt", "matplotlib.pyplot.axes" ]
[((4967, 5023), 'numpy.linspace', 'np.linspace', (['(0)', '(self.dt * (self.npts - 1))'], {'num': 'self.npts'}), '(0, self.dt * (self.npts - 1), num=self.npts)\n', (4978, 5023), True, 'import numpy as np\n'), ((7482, 7487), 'PySeismoSoil.class_frequency_spectrum.Frequency_Spectrum', 'FS', (['x'], {}), '(x)\n', (7484, 7...
#!/usr/bin/python3 # Copyright 2017 <NAME>. All Rights Reserved. # # This file is part of Bonnet. # # Bonnet is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by # the Free Software Foundation, either version 3 of the License, or # (at your...
[ "cv2.randn", "cv2.warpAffine", "cv2.getRotationMatrix2D", "cv2.flip", "cv2.bitwise_and", "numpy.zeros", "cv2.getAffineTransform", "numpy.full", "cv2.resize", "numpy.float32" ]
[((2952, 3009), 'cv2.resize', 'cv2.resize', (['img', '(cols, new_rows)'], {'interpolation': 'interpol'}), '(img, (cols, new_rows), interpolation=interpol)\n', (2962, 3009), False, 'import cv2\n'), ((3170, 3239), 'cv2.resize', 'cv2.resize', (['resized_img', '(new_cols, new_rows)'], {'interpolation': 'interpol'}), '(resi...
# -*- coding: utf-8 -*- """ Created on Sun Mar 08 2020 @author: Akash """ #%% # importing required libraries import argparse import os import matplotlib.pyplot as plt from matplotlib.pyplot import imshow import scipy.io import scipy.misc import numpy as np import pandas as pd import PIL import cv2...
[ "yolo_utils.preprocess_image", "tensorflow.boolean_mask", "keras.backend.learning_phase", "cv2.imshow", "yolo_utils.draw_boxes", "cv2.destroyAllWindows", "tensorflow.variables_initializer", "yolo_utils.generate_colors", "numpy.multiply", "yolo_utils.read_anchors", "keras.backend.max", "keras.b...
[((6873, 6888), 'keras.backend.get_session', 'K.get_session', ([], {}), '()\n', (6886, 6888), True, 'from keras import backend as K\n'), ((6960, 7003), 'yolo_utils.read_classes', 'read_classes', (['"""model_data/coco_classes.txt"""'], {}), "('model_data/coco_classes.txt')\n", (6972, 7003), False, 'from yolo_utils impor...
# Adapted from https://github.com/lengstrom/fast-style-transfer/blob/master/evaluate.py from __future__ import print_function,division import argparse import sys import os, random, subprocess, shutil, time import numpy as np import json import scipy from utils import preserve_colors_np from utils import get_files, get...
[ "numpy.hstack", "utils.preserve_colors_np", "scipy.misc.imresize", "os.path.exists", "os.listdir", "utils.resize_to", "argparse.ArgumentParser", "os.path.isdir", "utils.save_img", "random.randint", "wct.WCT", "os.path.splitext", "utils.get_img", "os.path.isfile", "utils.get_files", "ut...
[((462, 487), 'argparse.ArgumentParser', 'argparse.ArgumentParser', ([], {}), '()\n', (485, 487), False, 'import argparse\n'), ((428, 452), 'random.randint', 'random.randint', (['(0)', '(99999)'], {}), '(0, 99999)\n', (442, 452), False, 'import os, random, subprocess, shutil, time\n'), ((2676, 2854), 'wct.WCT', 'WCT', ...
import tensorflow as tf import numpy as np import corpus_handel import json #Corpus builder #===================================================== new_question = input("Ask a question: ") new_question = new_question.strip() new_question = corpus_handel.clean_str(new_question) new_question = new_question.split(" ") se...
[ "tensorflow.Graph", "tensorflow.ConfigProto", "corpus_handel.clean_str", "corpus_handel.load_data_and_labels", "corpus_handel.build_vocab", "tensorflow.Session", "numpy.array", "corpus_handel.batch_iter", "corpus_handel.pad_sentences", "numpy.concatenate", "tensorflow.train.latest_checkpoint", ...
[((239, 276), 'corpus_handel.clean_str', 'corpus_handel.clean_str', (['new_question'], {}), '(new_question)\n', (262, 276), False, 'import corpus_handel\n'), ((336, 372), 'corpus_handel.load_data_and_labels', 'corpus_handel.load_data_and_labels', ([], {}), '()\n', (370, 372), False, 'import corpus_handel\n'), ((534, 57...
""" Copyright 2020 The OneFlow Authors. All rights reserved. Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agr...
[ "traceback.format_stack", "numpy.copy", "oneflow.python.framework.c_api_util.JobBuildAndInferCtx_MirroredBlobGetSubLbi", "oneflow.python.framework.compile_context.CurJobAddMirroredOp", "oneflow_api.distribute.auto", "oneflow.python.framework.compile_context.CurJobAddConsistentOp", "functools.reduce", ...
[((13187, 13219), 'oneflow.python.oneflow_export.oneflow_export', 'oneflow_export', (['"""FixedTensorDef"""'], {}), "('FixedTensorDef')\n", (13201, 13219), False, 'from oneflow.python.oneflow_export import oneflow_export\n'), ((13988, 14023), 'oneflow.python.oneflow_export.oneflow_export', 'oneflow_export', (['"""Mirro...
import numpy as np import tensorflow as tf import gym from atari_wrappers import wrap_deepmind from ppo import PPO, DEFAULT_LOGDIR def ortho_init(scale=1.0): # (copied from OpenAI baselines) def _ortho_init(shape, dtype, partition_info=None): # lasagne ortho init for tf shape = tuple(shape) ...
[ "numpy.random.normal", "numpy.prod", "tensorflow.equal", "numpy.sqrt", "tensorflow.layers.flatten", "argparse.ArgumentParser", "atari_wrappers.wrap_deepmind", "json.load", "tensorflow.name_scope", "numpy.linalg.svd", "tensorflow.reduce_mean", "tensorflow.cast", "gym.make" ]
[((3395, 3420), 'argparse.ArgumentParser', 'argparse.ArgumentParser', ([], {}), '()\n', (3418, 3420), False, 'import argparse\n'), ((546, 584), 'numpy.random.normal', 'np.random.normal', (['(0.0)', '(1.0)', 'flat_shape'], {}), '(0.0, 1.0, flat_shape)\n', (562, 584), True, 'import numpy as np\n'), ((603, 640), 'numpy.li...
import numpy as np import matplotlib.pyplot as plt import skimage from skimage import filters import skimage.io from skimage.color import rgb2gray from scipy.signal import convolve2d def grad_energy(img, sigma = 3): """ Compute the gradient magnitude of an image by doing 1D convolutions with the derivativ...
[ "matplotlib.pyplot.imshow", "scipy.signal.convolve2d", "skimage.color.rgb2gray", "numpy.sqrt", "numpy.ones", "matplotlib.pyplot.plot", "matplotlib.pyplot.clf", "numpy.exp", "numpy.linspace", "numpy.zeros", "skimage.io.imread", "skimage.io.imsave", "matplotlib.pyplot.figure", "numpy.min", ...
[((5017, 5053), 'skimage.io.imsave', 'skimage.io.imsave', (['"""Result.png"""', 'img'], {}), "('Result.png', img)\n", (5034, 5053), False, 'import skimage\n'), ((559, 572), 'skimage.color.rgb2gray', 'rgb2gray', (['img'], {}), '(img)\n', (567, 572), False, 'from skimage.color import rgb2gray\n'), ((604, 641), 'numpy.lin...
import numpy as np from PIL import Image from src.neural_networks.art_fuzzy import ARTFUZZY from src.utils.functions import * import os path = os.getcwd() circ_imgs_paths = path+"/imgs/Retangulo10x10/" rect_imgs_paths = path+"/imgs/Circulo10x10/" list_circ_imgs = os.listdir(circ_imgs_paths) list_rect...
[ "numpy.array", "src.neural_networks.art_fuzzy.ARTFUZZY", "os.listdir", "os.getcwd" ]
[((157, 168), 'os.getcwd', 'os.getcwd', ([], {}), '()\n', (166, 168), False, 'import os\n'), ((283, 310), 'os.listdir', 'os.listdir', (['circ_imgs_paths'], {}), '(circ_imgs_paths)\n', (293, 310), False, 'import os\n'), ((330, 357), 'os.listdir', 'os.listdir', (['rect_imgs_paths'], {}), '(rect_imgs_paths)\n', (340, 357)...
# -*- coding: utf-8 -*- """ This module contains functions related to Hertz contact theory. As of now, the equations are limited to elliptical and circular contacts. Equations for line contacts (cylinder-on-flat or cylinder-on-cylinder) are currently not implemented. """ import copy import warnings from math import ...
[ "tribology.boundary_element.__secant", "numpy.abs", "numpy.amin", "tribology.tribology.profball", "numpy.delete", "math.sqrt", "math.log", "numpy.append", "copy.deepcopy", "warnings.warn", "numpy.amax" ]
[((5105, 5120), 'math.sqrt', 'sqrt', (['(r_a * r_b)'], {}), '(r_a * r_b)\n', (5109, 5120), False, 'from math import sqrt, pi, log, floor\n'), ((9179, 9248), 'math.sqrt', 'sqrt', (['((x_cords[0] - x_cords[1]) ** 2 + (y_cords[0] - y_cords[1]) ** 2)'], {}), '((x_cords[0] - x_cords[1]) ** 2 + (y_cords[0] - y_cords[1]) ** 2...
# Author: <NAME> <<EMAIL>> import os import numpy as np from numpy.testing import assert_array_equal import pytest from eelbrain import Dataset, Factor, Var from eelbrain._exceptions import DefinitionError from eelbrain.pipeline import * from eelbrain.testing import assert_dataobj_equal, TempDir SUBJECT = 'CheeseMo...
[ "eelbrain.Var", "os.makedirs", "numpy.testing.assert_array_equal", "eelbrain.Factor", "os.path.join", "eelbrain.Dataset", "eelbrain.testing.assert_dataobj_equal", "pytest.raises", "eelbrain.testing.TempDir", "numpy.arange" ]
[((448, 473), 'numpy.arange', 'np.arange', (['(1001)', '(1441)', '(55)'], {}), '(1001, 1441, 55)\n', (457, 473), True, 'import numpy as np\n'), ((418, 433), 'numpy.arange', 'np.arange', (['(1)', '(5)'], {}), '(1, 5)\n', (427, 433), True, 'import numpy as np\n'), ((522, 531), 'eelbrain.testing.TempDir', 'TempDir', ([], ...
# PyZX - Python library for quantum circuit rewriting # and optimization using the ZX-calculus # Copyright (C) 2018 - <NAME> and <NAME> # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at ...
[ "numpy.identity", "numpy.abs", "numpy.allclose", "numpy.sqrt", "numpy.ones", "numpy.tensordot", "math.sqrt", "numpy.exp", "numpy.array", "numpy.zeros", "numpy.transpose", "numpy.set_printoptions" ]
[((1450, 1484), 'numpy.set_printoptions', 'np.set_printoptions', ([], {'suppress': '(True)'}), '(suppress=True)\n', (1469, 1484), True, 'import numpy as np\n'), ((1844, 1880), 'numpy.zeros', 'np.zeros', (['([2] * arity)'], {'dtype': 'complex'}), '([2] * arity, dtype=complex)\n', (1852, 1880), True, 'import numpy as np\...
# -*- coding: utf8 from __future__ import division, print_function from numpy.testing import assert_equal from numpy.testing import assert_array_equal from phoenix import models from phoenix import ode import numpy as np def tests_the_phoenix_r_method(): '''Tests the phoenix r w period model''' exp_tseries ...
[ "phoenix.models.phoenix_r_with_period", "numpy.testing.assert_equal", "numpy.zeros", "phoenix.ode.shock", "phoenix.models.WavePhoenixR", "phoenix.models.FixedStartPhoenixR", "numpy.testing.assert_array_equal" ]
[((322, 346), 'numpy.zeros', 'np.zeros', (['(150)'], {'dtype': '"""d"""'}), "(150, dtype='d')\n", (330, 346), True, 'import numpy as np\n'), ((367, 404), 'phoenix.ode.shock', 'ode.shock', (['(0.01)', '(0)', '(0.8)', '(1000)', '(2)', '(200)'], {}), '(0.01, 0, 0.8, 1000, 2, 200)\n', (376, 404), False, 'from phoenix impor...
def show_all_cv_processing_output(): # Start to implement new version of algorithm import matplotlib.pyplot as plt import os import pydicom import numpy as np import cv2 import copy import seaborn as sns from numpy.random import randn import matplotlib as mpl from scipy ...
[ "numpy.uint8", "cv2.fitEllipse", "copy.deepcopy", "matplotlib.pyplot.imshow", "os.listdir", "cv2.line", "numpy.max", "os.path.isdir", "numpy.maximum", "cv2.drawContours", "os.path.isfile", "seaborn.desaturate", "matplotlib.pyplot.axes", "cv2.cvtColor", "matplotlib.pyplot.show", "numpy....
[((2470, 2488), 'os.listdir', 'os.listdir', (['folder'], {}), '(folder)\n', (2480, 2488), False, 'import os\n'), ((3309, 3379), 'cv2.findContours', 'cv2.findContours', (['gray_image', 'cv2.RETR_EXTERNAL', 'cv2.CHAIN_APPROX_NONE'], {}), '(gray_image, cv2.RETR_EXTERNAL, cv2.CHAIN_APPROX_NONE)\n', (3325, 3379), False, 'im...
import numpy as np height = [1.47, 1.50, 1.52, 1.55, 1.57, 1.60, 1.63, 1.65, 1.68, 1.70, 1.73, 1.75, 1.78, 1.80, 1.83] weight = [52.21, 53.12, 54.48, 55.84, 57.20, 58.57, 59.93, 61.29, 63.11, 64.47, 66.28, 68.10, 69.92, 72.19, 74.46] X = np.array(height)[:, None]**range(3) y = weight print(np.linalg.lstsq(X,...
[ "numpy.array", "numpy.linalg.lstsq" ]
[((248, 264), 'numpy.array', 'np.array', (['height'], {}), '(height)\n', (256, 264), True, 'import numpy as np\n'), ((302, 323), 'numpy.linalg.lstsq', 'np.linalg.lstsq', (['X', 'y'], {}), '(X, y)\n', (317, 323), True, 'import numpy as np\n')]
import typing import numpy as np import pytest from ebonite.core.objects import Model, ModelWrapper from ebonite.core.objects.artifacts import Blobs from ebonite.core.objects.core import EvaluationResults from ebonite.core.objects.metric import Metric from ebonite.core.objects.wrapper import PickleModelIO class Eva...
[ "numpy.mean", "numpy.ones", "numpy.sum", "pytest.raises", "ebonite.core.objects.wrapper.PickleModelIO", "ebonite.core.objects.artifacts.Blobs" ]
[((843, 870), 'numpy.mean', 'np.mean', (['float_data'], {'axis': '(1)'}), '(float_data, axis=1)\n', (850, 870), True, 'import numpy as np\n'), ((549, 570), 'numpy.mean', 'np.mean', (['data'], {'axis': '(1)'}), '(data, axis=1)\n', (556, 570), True, 'import numpy as np\n'), ((617, 638), 'numpy.mean', 'np.mean', (['data']...
""" Defines the DataRange1D class. """ # Major library imports from math import ceil, floor, log import six import six.moves as sm from numpy import compress, inf, isinf, isnan, ndarray # Enthought library imports from traits.api import Bool, CFloat, Enum, Float, Property, Trait, \ ...
[ "traits.api.Enum", "math.ceil", "math.floor", "traits.api.CFloat", "traits.api.Trait", "numpy.isnan", "traits.api.Bool", "numpy.isinf", "six.moves.zip", "traits.api.Float" ]
[((1769, 1779), 'traits.api.Bool', 'Bool', (['(True)'], {}), '(True)\n', (1773, 1779), False, 'from traits.api import Bool, CFloat, Enum, Float, Property, Trait, Callable\n'), ((2115, 2126), 'traits.api.Float', 'Float', (['(0.05)'], {}), '(0.05)\n', (2120, 2126), False, 'from traits.api import Bool, CFloat, Enum, Float...
# -*- coding: utf-8 -*- import dash import dash_auth import json import dash_core_components as dcc import dash_daq as daq import dash_bootstrap_components as dbc import dash_html_components as html from dash.dependencies import Input, Output from plotly.subplots import make_subplots import plotly.graph_objects as go i...
[ "pandas.to_timedelta", "pandas.read_csv", "dash_html_components.H3", "dash.dependencies.Input", "pandas.to_datetime", "dash.Dash", "numpy.arange", "plotly.express.density_contour", "plotly.graph_objects.Bar", "plotly.express.scatter", "dash.dependencies.Output", "dash_html_components.Br", "p...
[((506, 596), 'dash.Dash', 'dash.Dash', (['__name__'], {'meta_tags': "[{'name': 'viewport', 'content': 'width=device-width'}]"}), "(__name__, meta_tags=[{'name': 'viewport', 'content':\n 'width=device-width'}])\n", (515, 596), False, 'import dash\n'), ((607, 662), 'dash_auth.BasicAuth', 'dash_auth.BasicAuth', (['app...
# Copyright 2016 Quantopian, Inc. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writ...
[ "catalyst.data.dispatch_bar_reader.AssetDispatchSessionBarReader", "catalyst.data.resample.MinuteResampleSessionBarReader", "numpy.testing.assert_almost_equal", "catalyst.data.resample.ReindexMinuteBarReader", "numpy.array", "catalyst.data.resample.ReindexSessionBarReader", "pandas.DataFrame", "pandas...
[((1641, 1674), 'pandas.Timestamp', 'Timestamp', (['"""2016-08-22"""'], {'tz': '"""UTC"""'}), "('2016-08-22', tz='UTC')\n", (1650, 1674), False, 'from pandas import DataFrame, Timestamp\n'), ((1690, 1723), 'pandas.Timestamp', 'Timestamp', (['"""2016-08-24"""'], {'tz': '"""UTC"""'}), "('2016-08-24', tz='UTC')\n", (1699,...
import numpy as np # sigmoid function def sigmoid(x): return 1 / (1 + np.exp(-x)) # print function def identity_function(x): return x # 1st -> 2nd layer X = np.array([1.0, 0.5]) W1 = np.array([[0.1, 0.3, 0.5], [0.2, 0.4, 0.6]]) B1 = np.array([0.1, 0.2, 0.3]) A1 = np.dot(X, W1) + B1 Z1 = sigmoid(A1) print...
[ "numpy.exp", "numpy.array", "numpy.dot" ]
[((171, 191), 'numpy.array', 'np.array', (['[1.0, 0.5]'], {}), '([1.0, 0.5])\n', (179, 191), True, 'import numpy as np\n'), ((197, 241), 'numpy.array', 'np.array', (['[[0.1, 0.3, 0.5], [0.2, 0.4, 0.6]]'], {}), '([[0.1, 0.3, 0.5], [0.2, 0.4, 0.6]])\n', (205, 241), True, 'import numpy as np\n'), ((247, 272), 'numpy.array...
import os import numpy as np import yaml from typing import Dict, TYPE_CHECKING, List, Tuple def parse_options(param): # function to parse read parameters, sets "None" to None and "[]" to [] for key in list(param.__annotations__.keys()): if param.__getattribute__(key) == "None": param._...
[ "os.path.exists", "argparse.ArgumentParser", "os.path.join", "yaml.safe_load", "numpy.array", "pydantic.dataclasses.dataclass" ]
[((542, 553), 'pydantic.dataclasses.dataclass', 'dataclass', ([], {}), '()\n', (551, 553), False, 'from pydantic.dataclasses import dataclass\n'), ((6846, 6907), 'argparse.ArgumentParser', 'ArgumentParser', ([], {'formatter_class': 'ArgumentDefaultsHelpFormatter'}), '(formatter_class=ArgumentDefaultsHelpFormatter)\n', ...
# Copyright 2020 Google LLC # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # https://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, s...
[ "tensorflow.expand_dims", "audio_synthesis.datasets.maestro_dataset.get_maestro_waveform_dataset", "audio_synthesis.structures.learned_basis_function.Discriminator", "audio_synthesis.models.wgan.get_interpolation", "tensorflow.keras.optimizers.Adam", "tensorflow.GradientTape", "audio_synthesis.structure...
[((3284, 3342), 'audio_synthesis.datasets.maestro_dataset.get_maestro_waveform_dataset', 'maestro_dataset.get_maestro_waveform_dataset', (['MAESTRO_PATH'], {}), '(MAESTRO_PATH)\n', (3328, 3342), False, 'from audio_synthesis.datasets import maestro_dataset\n'), ((3370, 3392), 'copy.copy', 'copy.copy', (['raw_maestro'], ...
import visualization.panda.world as wd import modeling.geometric_model as gm import robot_sim.robots.xarm_shuidi.xarm_shuidi as xsm import robot_con.xarm_shuidi_grpc.xarm_shuidi_client as xsc import drivers.devices.kinect_azure.pykinectazure as pk import cv2 import cv2.aruco as aruco import numpy as np from vision.dept...
[ "numpy.mean", "cv2.aruco.drawDetectedMarkers", "vision.depth_camera.calibrator.load_calibration_data", "time.sleep", "cv2.aruco.DetectorParameters_create", "cv2.imshow", "cv2.aruco.Dictionary_get", "modeling.geometric_model.gen_frame", "robot_sim.robots.xarm_shuidi.xarm_shuidi.XArmShuidi", "robot_...
[((2775, 2793), 'drivers.devices.kinect_azure.pykinectazure.PyKinectAzure', 'pk.PyKinectAzure', ([], {}), '()\n', (2791, 2793), True, 'import drivers.devices.kinect_azure.pykinectazure as pk\n'), ((2801, 2850), 'visualization.panda.world.World', 'wd.World', ([], {'cam_pos': '[3, 3, 3]', 'lookat_pos': '[0, 0, 1]'}), '(c...
#!/usr/local/anaconda3/envs/py36 python # -*- coding: utf-8 -*- # Plotting import matplotlib; matplotlib.use('TkAgg') import matplotlib.pyplot as pl import seaborn as sns; sns.set_style('ticks') import matplotlib as mpl # from matplotlib.ticker import FormatStrFormatter params = { 'axes.labelsize': 16, 'font....
[ "numpy.log10", "numpy.log", "scipy.interpolate.interp1d", "seaborn.set_style", "numpy.array", "corner.corner", "lmfit.Parameters", "numpy.genfromtxt", "numpy.arange", "numpy.mean", "lmfit.Minimizer", "numpy.diff", "astropy.units.spectral_density", "matplotlib.pyplot.savefig", "matplotlib...
[((95, 118), 'matplotlib.use', 'matplotlib.use', (['"""TkAgg"""'], {}), "('TkAgg')\n", (109, 118), False, 'import matplotlib\n'), ((173, 195), 'seaborn.set_style', 'sns.set_style', (['"""ticks"""'], {}), "('ticks')\n", (186, 195), True, 'import seaborn as sns\n'), ((438, 465), 'matplotlib.rcParams.update', 'mpl.rcParam...
from Environments import ChessEnvironment from collections import defaultdict from constants import N_ACTIONS from dummy import generate_action_dict import numpy as np import time from threading import Thread # TODO: Tidy this up a2m, m2a = generate_action_dict() C_PUCT = 2 class MasterNode(): """ A placeholde...
[ "threading.Thread.__init__", "numpy.sqrt", "dummy.generate_action_dict", "time.perf_counter", "numpy.argmax", "numpy.invert", "numpy.argsort", "numpy.zeros", "collections.defaultdict", "Environments.ChessEnvironment" ]
[((243, 265), 'dummy.generate_action_dict', 'generate_action_dict', ([], {}), '()\n', (263, 265), False, 'from dummy import generate_action_dict\n'), ((3431, 3465), 'numpy.zeros', 'np.zeros', (['N_ACTIONS'], {'dtype': 'np.bool'}), '(N_ACTIONS, dtype=np.bool)\n', (3439, 3465), True, 'import numpy as np\n'), ((3581, 3600...
import os import cv2 import time import argparse import numpy as np import subprocess as sp import json import tensorflow as tf import serial import matplotlib.pyplot as plt import math from queue import Queue from threading import Thread from utils.app_utils import FPS, HLSVideoStream, WebcamVideoStream, draw_boxes_a...
[ "numpy.polyfit", "cv2.imshow", "numpy.array", "cv2.destroyAllWindows", "numpy.poly1d", "tensorflow.gfile.GFile", "math.atan", "utils.app_utils.FPS", "tensorflow.Graph", "argparse.ArgumentParser", "tensorflow.Session", "tensorflow.GraphDef", "object_detection.utils.label_map_util.load_labelma...
[((772, 819), 'numpy.array', 'np.array', (['[(6.52, 0.5), (56, 4.5), (92.3, 7.5)]'], {}), '([(6.52, 0.5), (56, 4.5), (92.3, 7.5)])\n', (780, 819), True, 'import numpy as np\n'), ((882, 925), 'numpy.array', 'np.array', (['[(12, 0.5), (13, 4.5), (16, 7.5)]'], {}), '([(12, 0.5), (13, 4.5), (16, 7.5)])\n', (890, 925), True...
import logging import numpy as np from scipy.integrate import quad from scipy.interpolate import BarycentricInterpolator from pySDC.core.Errors import CollocationError class CollBase(object): """ Abstract class for collocation Derived classes will contain everything to do integration over intervals and...
[ "logging.getLogger", "numpy.roll", "pySDC.core.Errors.CollocationError", "scipy.integrate.quad", "numpy.size", "numpy.dot", "numpy.zeros", "numpy.arange" ]
[((1704, 1736), 'logging.getLogger', 'logging.getLogger', (['"""collocation"""'], {}), "('collocation')\n", (1721, 1736), False, 'import logging\n'), ((2685, 2706), 'numpy.dot', 'np.dot', (['weights', 'data'], {}), '(weights, data)\n', (2691, 2706), True, 'import numpy as np\n'), ((3175, 3199), 'numpy.zeros', 'np.zeros...
# @Author: <NAME> <varoon> # @Date: 18-08-2017 # @Filename: kernel_convolution_ex.py # @Last modified by: varoon # @Last modified time: 18-08-2017 import cv2 import numpy as np #GOAL: Apply the following kernel convolution to an image: [-1,0,1||-1,5,-1||0,-1,0] #applying a sharpening kernel convolution manually...
[ "numpy.array", "numpy.zeros", "cv2.cvtColor", "cv2.filter2D" ]
[((918, 977), 'numpy.array', 'np.array', (['[[0, -1, 0], [-1, 5, -1], [0, -1, 0]]', 'np.float32'], {}), '([[0, -1, 0], [-1, 5, -1], [0, -1, 0]], np.float32)\n', (926, 977), True, 'import numpy as np\n'), ((1011, 1038), 'cv2.filter2D', 'cv2.filter2D', (['I', '(-1)', 'kernel'], {}), '(I, -1, kernel)\n', (1023, 1038), Fal...
#ShengpingJiang- Face recognition model as a flask application import pickle import numpy as np from flask import Flask, request #model = None app = Flask(__name__) def load_model(): global model # model variable refers to the global variable with open('face_model_file_frg', 'rb') as f: model = ...
[ "flask.request.get_json", "numpy.fromstring", "pickle.load", "flask.Flask" ]
[((151, 166), 'flask.Flask', 'Flask', (['__name__'], {}), '(__name__)\n', (156, 166), False, 'from flask import Flask, request\n'), ((320, 334), 'pickle.load', 'pickle.load', (['f'], {}), '(f)\n', (331, 334), False, 'import pickle\n'), ((593, 611), 'flask.request.get_json', 'request.get_json', ([], {}), '()\n', (609, 6...
import logging import unittest import numpy as np import pandas as pd import scipy.stats as stats from batchglm.api.models.tf1.glm_nb import Simulator import diffxpy.api as de class TestConstrained(unittest.TestCase): def test_forfatal_from_string(self): """ Test if _from_string interface is wo...
[ "logging.getLogger", "pandas.DataFrame", "batchglm.api.models.tf1.glm_nb.Simulator", "diffxpy.api.utils.constraint_matrix_from_string", "scipy.stats.kstest", "numpy.zeros", "numpy.random.seed", "unittest.main", "diffxpy.api.test.wald", "diffxpy.api.utils.design_matrix" ]
[((8905, 8920), 'unittest.main', 'unittest.main', ([], {}), '()\n', (8918, 8920), False, 'import unittest\n'), ((619, 636), 'numpy.random.seed', 'np.random.seed', (['(1)'], {}), '(1)\n', (633, 636), True, 'import numpy as np\n'), ((695, 752), 'batchglm.api.models.tf1.glm_nb.Simulator', 'Simulator', ([], {'num_observati...
import numpy as np from PTSS import PtssJoint as ptssjnt from PTSS import Ptss as ptss from CFNS import CyFns as cfns # define the 4th order Runge-Kutta algorithm. class RK4: def rk4(self, y0, dy, step): k1 = step * dy k2 = step * (dy + 1 / 2 * k1) k3 = step * (dy + 1 / 2 * k2) k4 ...
[ "numpy.radians", "numpy.sqrt", "numpy.random.rand", "CFNS.CyFns", "PTSS.Ptss.parse", "numpy.array", "numpy.linalg.norm", "numpy.sin", "numpy.arange", "PTSS.PtssJoint", "numpy.random.random", "numpy.heaviside", "numpy.exp", "numpy.degrees", "numpy.arctan", "numpy.abs", "numpy.ones", ...
[((509, 515), 'CFNS.CyFns', 'cfns', ([], {}), '()\n', (513, 515), True, 'from CFNS import CyFns as cfns\n'), ((886, 913), 'numpy.heaviside', 'np.heaviside', (['(thresh - x)', '(0)'], {}), '(thresh - x, 0)\n', (898, 913), True, 'import numpy as np\n'), ((986, 1016), 'numpy.heaviside', 'np.heaviside', (['(out - -thresh)'...
import typing import numpy as np ExampleSet = typing.Dict[str, typing.Any] class MathSet(object): def project(self, state): raise NotImplementedError() def distance_to_set(self, states): raise NotImplementedError() def describe(self): raise NotImplementedError() class DebugSe...
[ "numpy.array", "numpy.zeros", "numpy.random.randint", "numpy.random.uniform", "numpy.linalg.norm" ]
[((4518, 4545), 'numpy.random.uniform', 'np.random.uniform', (['(-4)', '(4)', '(1)'], {}), '(-4, 4, 1)\n', (4535, 4545), True, 'import numpy as np\n'), ((4734, 4761), 'numpy.random.uniform', 'np.random.uniform', (['(-4)', '(4)', '(1)'], {}), '(-4, 4, 1)\n', (4751, 4761), True, 'import numpy as np\n'), ((4775, 4802), 'n...
import os import time from tqdm import tqdm import torch import math import numpy as np from sklearn.utils.class_weight import compute_class_weight from torch.utils.data import DataLoader, RandomSampler from torch.nn import DataParallel from utils.log_utils import log_values, log_values_sl from utils.data_utils impo...
[ "torch.cuda.get_rng_state_all", "numpy.unique", "torch.nn.utils.clip_grad_norm_", "tqdm.tqdm", "utils.log_utils.log_values", "time.gmtime", "utils.log_utils.log_values_sl", "torch.get_rng_state", "utils.move_to", "utils.data_utils.BatchedRandomSampler", "torch.utils.data.DataLoader", "torch.no...
[((2988, 2999), 'time.time', 'time.time', ([], {}), '()\n', (2997, 2999), False, 'import time\n'), ((3504, 3606), 'torch.utils.data.DataLoader', 'DataLoader', (['train_dataset'], {'batch_size': 'opts.batch_size', 'shuffle': '(False)', 'num_workers': 'opts.num_workers'}), '(train_dataset, batch_size=opts.batch_size, shu...
# modified according to https://github.com/zhixuhao/unet import keras import numpy as np import os # import glob import skimage.io as io import skimage.transform as trans from keras import backend as K from keras.applications.vgg19 import VGG19 from keras.preprocessing import image from keras.applications.vgg19 import...
[ "numpy.reshape", "os.path.join", "keras.preprocessing.image.ImageDataGenerator", "numpy.max", "numpy.zeros", "keras.models.Model", "skimage.transform.resize" ]
[((3768, 3802), 'keras.models.Model', 'Model', ([], {'input': 'inputs', 'output': 'conv10'}), '(input=inputs, output=conv10)\n', (3773, 3802), False, 'from keras.models import Model\n'), ((4644, 4674), 'keras.preprocessing.image.ImageDataGenerator', 'ImageDataGenerator', ([], {}), '(**aug_dict)\n', (4662, 4674), False,...
"""Module for correcting PERKEO data.""" import configparser import copy import numpy as np from panter.base.corrBase import CorrBase from panter.config import conf_path from panter.config.params import delt_pmt from panter.config.params import k_pmt_fix from panter.data.dataHistPerkeo import HistPerkeo from panter....
[ "panter.eval.evalFunctions.calc_acorr_ratedep", "numpy.abs", "numpy.ones", "configparser.ConfigParser", "panter.data.dataloaderPerkeo.DLPerkeo", "panter.eval.evalDriftGPR.GPRDrift", "numpy.asarray", "torch.tensor", "panter.eval.pedPerkeo.PedPerkeo", "panter.data.dataMisc.FilePerkeo", "numpy.arra...
[((561, 588), 'configparser.ConfigParser', 'configparser.ConfigParser', ([], {}), '()\n', (586, 588), False, 'import configparser\n'), ((16256, 16274), 'panter.data.dataloaderPerkeo.DLPerkeo', 'DLPerkeo', (['data_dir'], {}), '(data_dir)\n', (16264, 16274), False, 'from panter.data.dataloaderPerkeo import DLPerkeo\n'), ...
import os import numpy as np from scipy.io import loadmat def fetch(label_path, data_dir): """ Return the articulatory(ema) and acoustic(mfcc) data for a certain speech wave, with its label path given as an input. Parameters ---------- label_path: str path of a label transcription file (has...
[ "numpy.delete", "os.path.join" ]
[((1050, 1106), 'numpy.delete', 'np.delete', (['ema', '[1, 4, 7, 10, 12, 13, 14, 15, 16, 17]', '(0)'], {}), '(ema, [1, 4, 7, 10, 12, 13, 14, 15, 16, 17], 0)\n', (1059, 1106), True, 'import numpy as np\n'), ((1235, 1269), 'os.path.join', 'os.path.join', (['mfcc_dir', 'splits[-1]'], {}), '(mfcc_dir, splits[-1])\n', (1247...
import json import xnet import glob import numpy as np import matplotlib.pyplot as plt from igraph import * from scipy import signal from read_file import load_data from itertools import combinations from collections import defaultdict def create_nets_by_year(): # CRIA AS REDES POR ANO file = 'data/plos_one_2019_su...
[ "json.loads", "xnet.xnet2igraph", "matplotlib.pyplot.savefig", "read_file.load_data", "xnet.igraph2xnet", "numpy.arange", "numpy.histogram", "numpy.convolve", "numpy.power", "itertools.combinations", "collections.defaultdict", "matplotlib.pyplot.tight_layout", "matplotlib.pyplot.subplots", ...
[((1328, 1353), 'json.loads', 'json.loads', (['complete_data'], {}), '(complete_data)\n', (1338, 1353), False, 'import json\n'), ((1485, 1559), 'read_file.load_data', 'load_data', (['"""data/plos_one_2019_breakpoints_k4_original1_data_filtered.txt"""'], {}), "('data/plos_one_2019_breakpoints_k4_original1_data_filtered....
import logging from typing import Union, Annotated from beartype import beartype from beartype.vale import Is from UQpy.distributions import * import numpy as np import scipy.stats as stats from UQpy.utilities.Utilities import nearest_psd, calculate_gauss_quadrature_2d from UQpy.utilities.Utilities import bi_variate_n...
[ "logging.getLogger", "numpy.sqrt", "scipy.linalg.cholesky", "numpy.array", "numpy.isfinite", "numpy.linalg.norm", "UQpy.utilities.Utilities.nearest_psd", "scipy.stats.norm.cdf", "numpy.atleast_2d", "numpy.dot", "numpy.eye", "UQpy.utilities.Utilities.calculate_gauss_quadrature_2d", "numpy.siz...
[((4434, 4461), 'logging.getLogger', 'logging.getLogger', (['__name__'], {}), '(__name__)\n', (4451, 4461), False, 'import logging\n'), ((5825, 5858), 'scipy.linalg.cholesky', 'cholesky', (['self.corr_z'], {'lower': '(True)'}), '(self.corr_z, lower=True)\n', (5833, 5858), False, 'from scipy.linalg import cholesky\n'), ...
import argparse import time import os import numpy as np import pandas as pd import tqdm import h5py from generation.config import DF_DIR, EVENTS_PATH, DETECTORS_PATH, FULL_SIGNALS_DIR, PROCESSING_TIME_NORM_COEF, \ SIGNAL_DIM, SPACAL_DATA_PATH, FRAC_SIGNALS_DIR, H5_DATASET_NAME, POSTPROCESSED_SIGNALS_DIR def cr...
[ "os.path.exists", "pandas.read_parquet", "os.path.join", "h5py.File", "numpy.exp", "numpy.array", "numpy.zeros", "numpy.sum", "numpy.linspace", "os.mkdir", "numpy.load" ]
[((443, 463), 'h5py.File', 'h5py.File', (['path', '"""w"""'], {}), "(path, 'w')\n", (452, 463), False, 'import h5py\n'), ((593, 613), 'h5py.File', 'h5py.File', (['path', '"""r"""'], {}), "(path, 'r')\n", (602, 613), False, 'import h5py\n'), ((871, 884), 'numpy.load', 'np.load', (['path'], {}), '(path)\n', (878, 884), T...
# PLOT STREAMFUNCTION from __future__ import print_function path = '/home/mkloewer/python/swm/' import os; os.chdir(path) # change working directory import numpy as np from scipy import sparse from scipy.integrate import cumtrapz import matplotlib.pyplot as plt import time as tictoc from netCDF4 import Dataset import g...
[ "os.chdir", "numpy.load", "matplotlib.pyplot.subplots", "matplotlib.pyplot.show" ]
[((107, 121), 'os.chdir', 'os.chdir', (['path'], {}), '(path)\n', (115, 121), False, 'import os\n'), ((1321, 1365), 'matplotlib.pyplot.subplots', 'plt.subplots', (['(1)', '(2)'], {'sharex': '(True)', 'sharey': '(True)'}), '(1, 2, sharex=True, sharey=True)\n', (1333, 1365), True, 'import matplotlib.pyplot as plt\n'), ((...
import importlib from hydroDL.master import basins from hydroDL.app import waterQuality from hydroDL import kPath from hydroDL.model import trainTS from hydroDL.data import gageII, usgs from hydroDL.post import axplot, figplot import torch import os import json import numpy as np import pandas as pd import matplotlib....
[ "hydroDL.post.axplot.mapPoint", "hydroDL.post.figplot.clickMap", "hydroDL.data.gageII.readData", "matplotlib.pyplot.plot", "hydroDL.master.basins.testModelSeq", "hydroDL.app.waterQuality.DataModelWQ", "numpy.datetime64", "hydroDL.master.basins.loadSeq", "hydroDL.post.axplot.plotTS", "matplotlib.py...
[((344, 375), 'hydroDL.app.waterQuality.DataModelWQ', 'waterQuality.DataModelWQ', (['"""HBN"""'], {}), "('HBN')\n", (368, 375), False, 'from hydroDL.app import waterQuality\n'), ((1227, 1246), 'matplotlib.pyplot.plot', 'plt.plot', (['a', 'b', '"""*"""'], {}), "(a, b, '*')\n", (1235, 1246), True, 'import matplotlib.pypl...
import numpy as np from nilearn.image import new_img_like, resample_to_img from unet3d.utils.affine import get_extent_from_image, adjust_affine_spacing def pad_image(image, mode='edge', pad_width=1): affine = np.copy(image.affine) spacing = np.copy(image.header.get_zooms()[:3]) affine[:3, 3] -= spacing *...
[ "nilearn.image.new_img_like", "numpy.copy", "unet3d.utils.affine.get_extent_from_image", "numpy.zeros", "nilearn.image.resample_to_img" ]
[((216, 237), 'numpy.copy', 'np.copy', (['image.affine'], {}), '(image.affine)\n', (223, 237), True, 'import numpy as np\n'), ((891, 910), 'numpy.zeros', 'np.zeros', (['new_shape'], {}), '(new_shape)\n', (899, 910), True, 'import numpy as np\n'), ((927, 975), 'nilearn.image.new_img_like', 'new_img_like', (['image', 'ne...
from gl0learn.gl0learn_core import ( check_is_coordinate_subset, ) from hypothesis import given from hypothesis import strategies as st import numpy as np @st.composite def size_and_subset(draw: st.DrawFn, max_columns: int = 10): n = draw(st.integers(min_value=1, max_value=max_columns)) n = (n - 1) * n //...
[ "numpy.triu_indices", "hypothesis.strategies.integers", "gl0learn.gl0learn_core.check_is_coordinate_subset" ]
[((727, 767), 'gl0learn.gl0learn_core.check_is_coordinate_subset', 'check_is_coordinate_subset', (['full', 'subset'], {}), '(full, subset)\n', (753, 767), False, 'from gl0learn.gl0learn_core import check_is_coordinate_subset\n'), ((249, 296), 'hypothesis.strategies.integers', 'st.integers', ([], {'min_value': '(1)', 'm...
""" Manages parameters for models. A parameter has a lower bound, upper bound, and value. Parameters are an lmfit collection of parameter. A parameter collection is a collection of parameters. """ from SBstoat import _constants as cn import matplotlib.pyplot as plt import numpy as np import lmfit LOWER_PARAMETER_M...
[ "lmfit.Parameter", "numpy.isclose", "lmfit.Parameters" ]
[((919, 946), 'numpy.isclose', 'np.isclose', (['self.lower', '(0.0)'], {}), '(self.lower, 0.0)\n', (929, 946), True, 'import numpy as np\n'), ((991, 1018), 'numpy.isclose', 'np.isclose', (['self.upper', '(0.0)'], {}), '(self.upper, 0.0)\n', (1001, 1018), True, 'import numpy as np\n'), ((1810, 1916), 'lmfit.Parameter', ...
"""Linear Predictive Coding analysis and resynthesis for audio.""" import numpy as np import scipy.signal def lpcfit(x, p=12, h=128, w=None, overlaps=True): """Perform LPC analysis of short-time windows of a waveform. Args: x: 1D np.array containing input audio waveform. p: int, order of LP models to fit...
[ "numpy.hanning", "numpy.mean", "numpy.sqrt", "numpy.hstack", "numpy.round", "numpy.argmax", "numpy.max", "numpy.zeros", "numpy.correlate", "numpy.random.randn", "numpy.arange" ]
[((1150, 1174), 'numpy.zeros', 'np.zeros', (['(nhops, p + 1)'], {}), '((nhops, p + 1))\n', (1158, 1174), True, 'import numpy as np\n'), ((1179, 1194), 'numpy.zeros', 'np.zeros', (['nhops'], {}), '(nhops)\n', (1187, 1194), True, 'import numpy as np\n'), ((1366, 1382), 'numpy.arange', 'np.arange', (['nhops'], {}), '(nhop...
import pytest import numpy as np import time from ding.utils.time_helper import build_time_helper, WatchDog, TimeWrapperTime, EasyTimer @pytest.mark.unittest class TestTimeHelper: def test_naive(self): class NaiveObject(object): pass cfg = NaiveObject() setattr(cfg, 'common'...
[ "numpy.isscalar", "ding.utils.time_helper.EasyTimer", "numpy.random.random", "time.sleep", "pytest.raises", "ding.utils.time_helper.build_time_helper", "ding.utils.time_helper.WatchDog" ]
[((612, 634), 'ding.utils.time_helper.build_time_helper', 'build_time_helper', (['cfg'], {}), '(cfg)\n', (629, 634), False, 'from ding.utils.time_helper import build_time_helper, WatchDog, TimeWrapperTime, EasyTimer\n'), ((657, 695), 'ding.utils.time_helper.build_time_helper', 'build_time_helper', ([], {'wrapper_type':...
import time from types import SimpleNamespace import argparse import cv2 import matplotlib.pyplot as plt import numpy as np import toml from astar import Astar from dwa import DWA parser = argparse.ArgumentParser() parser.add_argument("-m", "--map", default="circuit", help="The name of the map. See config.toml for ...
[ "numpy.array", "numpy.arctan2", "numpy.sin", "matplotlib.pyplot.imshow", "numpy.flip", "argparse.ArgumentParser", "astar.Astar", "matplotlib.pyplot.plot", "dwa.DWA", "numpy.linspace", "toml.load", "matplotlib.pyplot.scatter", "types.SimpleNamespace", "numpy.cos", "cv2.cvtColor", "matpl...
[((193, 218), 'argparse.ArgumentParser', 'argparse.ArgumentParser', ([], {}), '()\n', (216, 218), False, 'import argparse\n'), ((348, 372), 'toml.load', 'toml.load', (['"""config.toml"""'], {}), "('config.toml')\n", (357, 372), False, 'import toml\n'), ((415, 447), 'types.SimpleNamespace', 'SimpleNamespace', ([], {}), ...
import numpy as np class Tensor(np.ndarray): """ """ def __init__(self, *args, **kwargs): self.grad = None def from_array(arr): """Convert the input array-like to a tensor.""" t = arr.view(Tensor) t.grad = None return t def zeros(shape): """Return a new tensor of given shap...
[ "numpy.random.normal", "pdb.set_trace" ]
[((758, 773), 'pdb.set_trace', 'pdb.set_trace', ([], {}), '()\n', (771, 773), False, 'import pdb\n'), ((661, 711), 'numpy.random.normal', 'np.random.normal', ([], {'loc': 'loc', 'scale': 'scale', 'size': 'shape'}), '(loc=loc, scale=scale, size=shape)\n', (677, 711), True, 'import numpy as np\n')]
""" echelle2d.py A generic set of code to process echelle 2d spectra that are stored in a multi-extension fits format. This code is used by some of the ESI and NIRES code that are in the keckcode repository """ import numpy as np from matplotlib import pyplot as plt from astropy.io import fits as pf from astropy.t...
[ "astropy.table.Table", "astropy.io.fits.PrimaryHDU", "numpy.arange", "matplotlib.pyplot.gcf", "astropy.io.fits.ImageHDU", "matplotlib.pyplot.plot", "specim.specfuncs.Spec2d", "numpy.zeros", "numpy.array", "astropy.io.fits.open", "matplotlib.pyplot.ylim", "matplotlib.pyplot.xlim", "matplotlib...
[((7950, 7983), 'matplotlib.pyplot.subplots_adjust', 'plt.subplots_adjust', ([], {'hspace': '(0.001)'}), '(hspace=0.001)\n', (7969, 7983), True, 'from matplotlib import pyplot as plt\n'), ((8079, 8088), 'matplotlib.pyplot.gcf', 'plt.gcf', ([], {}), '()\n', (8086, 8088), True, 'from matplotlib import pyplot as plt\n'), ...
from __future__ import absolute_import from __future__ import division from __future__ import print_function from scipy import misc import tensorflow as tf import numpy as np import sys import os import copy import argparse import facenet import align.detect_face import pickle from flask import Flask,request from fla...
[ "flask.Flask", "scipy.misc.imresize", "tensorflow.GPUOptions", "facenet.load_model", "flask.jsonify", "tensorflow.Graph", "argparse.ArgumentParser", "tensorflow.Session", "numpy.asarray", "numpy.subtract", "numpy.stack", "scipy.misc.imread", "facenet.prewhiten", "tensorflow.ConfigProto", ...
[((346, 361), 'flask.Flask', 'Flask', (['__name__'], {}), '(__name__)\n', (351, 361), False, 'from flask import Flask, request\n'), ((371, 383), 'tensorflow.Session', 'tf.Session', ([], {}), '()\n', (381, 383), True, 'import tensorflow as tf\n'), ((384, 427), 'facenet.load_model', 'facenet.load_model', (['"""../2018040...
#!/usr/bin/env python import matplotlib matplotlib.use('Agg') # Must be before importing matplotlib.pyplot or pylab! import sys import seaborn as sns from pandas import read_pickle, qcut from itertools import product import matplotlib.pyplot as plt from pandas import get_dummies from pandas import groupby import nump...
[ "pandas.read_pickle", "seaborn.set_palette", "matplotlib.pyplot.savefig", "pandas.qcut", "matplotlib.use", "itertools.product", "seaborn.set_context", "matplotlib.pyplot.close", "matplotlib.pyplot.figure", "seaborn.violinplot", "numpy.percentile", "seaborn.jointplot", "seaborn.axes_style", ...
[((41, 62), 'matplotlib.use', 'matplotlib.use', (['"""Agg"""'], {}), "('Agg')\n", (55, 62), False, 'import matplotlib\n'), ((350, 384), 'seaborn.set_palette', 'sns.set_palette', (['"""deep"""'], {'desat': '(0.6)'}), "('deep', desat=0.6)\n", (365, 384), True, 'import seaborn as sns\n'), ((384, 430), 'seaborn.set_context...
import rematbal.matbal as mb import numpy as np from scipy.optimize import fsolve import pandas as pd def mbal_inner_calc(dict, P, Pres_calc, We, aquifer_pres, step): Np, Wp, Gp, N, Wei, pvt_oil_pressure, pvt_oil_Bo, pvt_oil_Bg, pvt_oil_Rs, Rsb, \ Bti, Bgi, Pi, m, Boi, cw, Swi, cf, Rsi, Bw, Winj, Bwinj, Ginj, ...
[ "scipy.optimize.fsolve", "rematbal.matbal.production_injection_balance", "rematbal.matbal.VEH_aquifer_influx", "rematbal.matbal.pore_volume_reduction_connate_water_expansion", "numpy.array", "rematbal.matbal.dissolved_oil_and_gas_expansion", "numpy.exp", "rematbal.matbal.gas_cap_expansion", "rematba...
[((413, 455), 'numpy.interp', 'np.interp', (['P', 'pvt_oil_pressure', 'pvt_oil_Bo'], {}), '(P, pvt_oil_pressure, pvt_oil_Bo)\n', (422, 455), True, 'import numpy as np\n'), ((465, 507), 'numpy.interp', 'np.interp', (['P', 'pvt_oil_pressure', 'pvt_oil_Bg'], {}), '(P, pvt_oil_pressure, pvt_oil_Bg)\n', (474, 507), True, 'i...
from abc import ABC, abstractmethod from collections import defaultdict from datetime import datetime, timedelta import json import logging from multiprocessing import Pool, cpu_count import os import pathlib import posixpath import shutil import tarfile import tempfile from time import time from typing import Union i...
[ "logging.getLogger", "wget.download", "tarfile.open", "scipy.spatial.cKDTree", "pyschism.dates.localize_datetime", "shapely.ops.linemerge", "appdirs.user_data_dir", "pyschism.dates.nearest_cycle", "multiprocessing.cpu_count", "shapely.geometry.Point", "numpy.array", "datetime.timedelta", "nu...
[((961, 988), 'logging.getLogger', 'logging.getLogger', (['__name__'], {}), '(__name__)\n', (978, 988), False, 'import logging\n'), ((869, 906), 'appdirs.user_data_dir', 'appdirs.user_data_dir', (['"""pyschism/nwm"""'], {}), "('pyschism/nwm')\n", (890, 906), False, 'import appdirs\n'), ((12600, 12613), 'netCDF4.Dataset...
''' Bremerton Weak Lensing Round Trip Module for CosmoSIS ATTRIBUTION: CFHTLens because this is a copy of the CFHTLens module with some minor modifications. ''' from cosmosis.datablock import option_section, names as section_names import bremerton_like from bremerton_like import n_z_bin import numpy as np def setup(...
[ "bremerton_like.BremertonLikelihood", "numpy.concatenate" ]
[((640, 698), 'bremerton_like.BremertonLikelihood', 'bremerton_like.BremertonLikelihood', (['covmat_file', 'data_file'], {}), '(covmat_file, data_file)\n', (674, 698), False, 'import bremerton_like\n'), ((1008, 1038), 'numpy.concatenate', 'np.concatenate', (['(theta, theta)'], {}), '((theta, theta))\n', (1022, 1038), T...
# encoding: utf-8 import torch import torch.nn as nn import torch.nn.functional as F import numpy as np from xmuda.models.LMSCNet import SegmentationHead from xmuda.models.CP_baseline import CPBaseline from xmuda.models.CP_implicit import CPImplicit from xmuda.models.CP_v5 import CPMegaVoxels #from xmuda.models.CP_v6 ...
[ "xmuda.models.LMSCNet.SegmentationHead", "numpy.ones", "torch.cuda.is_available", "xmuda.models.modules.Process", "xmuda.models.modules.Upsample", "xmuda.models.CP_v5.CPMegaVoxels", "xmuda.models.modules.Downsample", "torch.rand" ]
[((1790, 1859), 'xmuda.models.modules.Upsample', 'Upsample', (['(self.feature * 8)', '(self.feature * 4)', 'norm_layer', 'bn_momentum'], {}), '(self.feature * 8, self.feature * 4, norm_layer, bn_momentum)\n', (1798, 1859), False, 'from xmuda.models.modules import Process, Upsample, Downsample\n'), ((1884, 1953), 'xmuda...
from numbers import Number from typing import TypeVar import numpy as np from matplotlib import pyplot as plt x = np.linspace(0.01, 1, 100) T = TypeVar("T", Number, np.ndarray) gamma_vector = np.vectorize(np.math.gamma) def factorial(a: T) -> T: return gamma_vector(a + 1) def R(x: T, N: int) -> T: retur...
[ "matplotlib.pyplot.savefig", "matplotlib.pyplot.show", "matplotlib.pyplot.ylabel", "matplotlib.pyplot.xlabel", "numpy.linspace", "numpy.vectorize", "matplotlib.pyplot.legend", "typing.TypeVar" ]
[((116, 141), 'numpy.linspace', 'np.linspace', (['(0.01)', '(1)', '(100)'], {}), '(0.01, 1, 100)\n', (127, 141), True, 'import numpy as np\n'), ((147, 179), 'typing.TypeVar', 'TypeVar', (['"""T"""', 'Number', 'np.ndarray'], {}), "('T', Number, np.ndarray)\n", (154, 179), False, 'from typing import TypeVar\n'), ((196, 2...
""" This example shows how to use a variant of a 1 dimensional Moving Least Squares (MLS) algorithm to project a cloud of unordered points to become a smooth line. The parameter f controls the size of the local regression. If showNLines>0 an actor is built demonstrating the details of the regression for some random poi...
[ "numpy.random.shuffle" ]
[((768, 790), 'numpy.random.shuffle', 'np.random.shuffle', (['pts'], {}), '(pts)\n', (785, 790), True, 'import numpy as np\n')]
import argparse import os import torch import torch.nn as nn import torch.utils.data import torch.nn.functional as F import utils.logger as logger import torch.backends.cudnn as cudnn # https://forums.developer.nvidia.com/t/onnx-to-tensorrt-conversion-fails/180953/5 # https://github.com/NVIDIA/TensorRT/issues/805 # --...
[ "onnx.save", "numpy.array", "onnx.load", "tensorrt.Builder", "tensorrt.OnnxParser", "argparse.ArgumentParser", "torch2trt.torch2trt", "os.path.isdir", "onnx_graphsurgeon.export_onnx", "common.GiB", "torch.onnx.export", "mmcv.onnx.symbolic.register_extra_symbolics", "onnxsim.simplify", "uti...
[((568, 630), 'argparse.ArgumentParser', 'argparse.ArgumentParser', ([], {'description': '"""Anynet fintune on KITTI"""'}), "(description='Anynet fintune on KITTI')\n", (591, 630), False, 'import argparse\n'), ((2634, 2664), 'tensorrt.Logger', 'trt.Logger', (['trt.Logger.WARNING'], {}), '(trt.Logger.WARNING)\n', (2644,...
#!/usr/bin/env python2 # -*- coding: utf-8 -*- """ Created on Mon Dec 10 16:37:54 2018 Modified on Mon Jul 22 @author: Purnendu Mishra """ import cv2 import numpy as np import pandas as pd from skimage import io,color from keras import backend as K from keras.utils import Sequence, to_categorical #from keras.prep...
[ "cv2.warpAffine", "keras.backend.image_data_format", "numpy.isscalar", "random.shuffle", "xml.etree.ElementTree.parse", "numpy.random.random", "utility.point_form", "pathlib.Path.home", "keras.utils.to_categorical", "numpy.array", "skimage.io.imread", "numpy.zeros", "numpy.random.seed", "n...
[((1031, 1046), 'skimage.io.imread', 'io.imread', (['path'], {}), '(path)\n', (1040, 1046), False, 'from skimage import io, color\n'), ((1086, 1145), 'cv2.resize', 'cv2.resize', (['img', 'target_size'], {'interpolation': 'cv2.INTER_CUBIC'}), '(img, target_size, interpolation=cv2.INTER_CUBIC)\n', (1096, 1145), False, 'i...
from __future__ import division #/usr/bin/python __version__ = '0.324.2' __author__ = '<EMAIL>' ## ## Generic imports import os import csv import PyPDF2 import warnings import peakutils import matplotlib import collections import numpy as np import scipy as sp matplotlib.use('Agg') import logging as log import seabor...
[ "logging.getLogger", "matplotlib.pyplot.ylabel", "peakutils.indexes", "numpy.array", "scipy.stats.sem", "PyPDF2.PdfFileWriter", "numpy.arange", "os.remove", "numpy.mean", "seaborn.set", "os.listdir", "numpy.where", "matplotlib.pyplot.xlabel", "numpy.asarray", "matplotlib.pyplot.close", ...
[((263, 284), 'matplotlib.use', 'matplotlib.use', (['"""Agg"""'], {}), "('Agg')\n", (277, 284), False, 'import matplotlib\n'), ((1340, 1365), 'collections.OrderedDict', 'collections.OrderedDict', ([], {}), '()\n', (1363, 1365), False, 'import collections\n'), ((3494, 3687), 'sklearn.svm.LinearSVC', 'svm.LinearSVC', ([]...
import numpy as np from scipy.stats import gamma from evalml.data_checks import ( DataCheck, DataCheckMessageCode, DataCheckWarning ) from evalml.utils import _convert_woodwork_types_wrapper, infer_feature_types class OutliersDataCheck(DataCheck): """Checks if there are any outliers in input data by ...
[ "scipy.stats.gamma.cdf", "evalml.utils.infer_feature_types", "numpy.log", "numpy.exp", "numpy.percentile", "evalml.data_checks.DataCheckWarning" ]
[((1959, 1981), 'evalml.utils.infer_feature_types', 'infer_feature_types', (['X'], {}), '(X)\n', (1978, 1981), False, 'from evalml.utils import _convert_woodwork_types_wrapper, infer_feature_types\n'), ((4913, 4932), 'numpy.log', 'np.log', (['num_records'], {}), '(num_records)\n', (4919, 4932), True, 'import numpy as n...
"""Uniform hazard spectra benchmark tests""" import os import pathlib import yaml import pytest import pandas as pd import numpy as np from gmhazard_calc import site from gmhazard_calc import uhs from gmhazard_calc import gm_data from gmhazard_calc import constants from gmhazard_calc.im import IMType, IM_COMPONENT_MA...
[ "gmhazard_calc.uhs.EnsembleUHSResult.combine_results", "pandas.read_csv", "pathlib.Path", "os.getenv", "numpy.asanyarray", "yaml.safe_load", "pytest.fixture", "pandas.testing.assert_frame_equal", "gmhazard_calc.gm_data.Ensemble", "gmhazard_calc.site.get_site_from_name" ]
[((342, 372), 'pytest.fixture', 'pytest.fixture', ([], {'scope': '"""module"""'}), "(scope='module')\n", (356, 372), False, 'import pytest\n'), ((532, 549), 'yaml.safe_load', 'yaml.safe_load', (['f'], {}), '(f)\n', (546, 549), False, 'import yaml\n'), ((835, 884), 'pandas.testing.assert_frame_equal', 'pd.testing.assert...
'''This module implements concrete agent controllers for the rollout worker''' import copy import time from collections import OrderedDict import math import numpy as np import rospy import logging from gazebo_msgs.msg import ModelState from std_msgs.msg import Float64 from shapely.geometry import Point from markov.vi...
[ "markov.agent_ctrl.utils.get_speed_factor", "markov.visual_effects.effects.blink_effect.BlinkEffect", "shapely.geometry.Point", "numpy.array", "markov.gazebo_tracker.trackers.set_model_state_tracker.SetModelStateTracker.get_instance", "math.isinf", "markov.agent_ctrl.utils.set_reward_and_metrics", "co...
[((2006, 2036), 'markov.agent_ctrl.utils.Logger', 'Logger', (['__name__', 'logging.INFO'], {}), '(__name__, logging.INFO)\n', (2012, 2036), False, 'from markov.agent_ctrl.utils import set_reward_and_metrics, send_action, load_action_space, get_speed_factor, get_normalized_progress, Logger\n'), ((2690, 2732), 'markov.re...
import cv2 from cv2 import cvtColor import numpy as np def get_detect_lanes(image, filter='laplacian'): grayscale_image = cv2.cvtColor(image, cv2.COLOR_BGR2GRAY) if filter.lower() == 'laplacian': edge_kernel = np.array([ [0, 1, 0], [1, -4, 1], ...
[ "cv2.filter2D", "cv2.imshow", "numpy.array", "cv2.destroyAllWindows", "cv2.VideoCapture", "cv2.cvtColor", "cv2.Canny", "cv2.waitKey" ]
[((565, 616), 'cv2.VideoCapture', 'cv2.VideoCapture', (['"""videos/lane_detection_video.mp4"""'], {}), "('videos/lane_detection_video.mp4')\n", (581, 616), False, 'import cv2\n'), ((850, 873), 'cv2.destroyAllWindows', 'cv2.destroyAllWindows', ([], {}), '()\n', (871, 873), False, 'import cv2\n'), ((128, 167), 'cv2.cvtCo...