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import matplotlib matplotlib.use('agg') import matplotlib.pyplot as plt import abc,os,pickle,sys import scipy.stats import numpy as np from datetime import datetime import tensorflow as tf from BatchIterator import PaddedDataIterator from generation import * from Plotter import get_intensity,get_integral,get_integral_...
[ "Utils.file2sequence", "tensorflow.shape", "matplotlib.pyplot.grid", "matplotlib.pyplot.ylabel", "numpy.linalg.norm", "tensorflow.reduce_mean", "tensorflow.set_random_seed", "tensorflow.GPUOptions", "tensorflow.log", "BatchIterator.PaddedDataIterator", "os.path.exists", "Utils.sequence2file", ...
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import math import cv2 import numpy as np import tensorflow as tf from scipy import ndimage import os from MNIST_data import input_data class Recognizer: def __init__(self): pass @staticmethod def shift(img, sx, sy): rows, cols = img.shape M = np.float32([[1, 0, sx], [0, 1, sy]])...
[ "math.floor", "numpy.lib.pad", "scipy.ndimage.measurements.center_of_mass", "tensorflow.cast", "tensorflow.log", "os.remove", "MNIST_data.input_data.read_data_sets", "cv2.threshold", "numpy.delete", "tensorflow.placeholder", "tensorflow.Session", "tensorflow.matmul", "numpy.round", "tensor...
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# -*- coding: utf-8 -*- # Copyright 2017 <NAME> # Copyright 2018 <NAME> # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Un...
[ "ccpi.viewer.CILViewer2D.ViewerEventManager", "vtk.vtkDecimatePro", "vtk.vtkImageMapToWindowLevelColors", "vtk.vtkTextMapper", "vtk.vtkTextProperty", "vtk.vtkPNGWriter", "ccpi.viewer.utils.colormaps.CILColorMaps.get_color_transfer_function", "vtk.vtkImageActor", "vtk.vtkInteractorStyleTrackballCamer...
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from setuptools import setup, Extension import numpy as np from Cython.Build import cythonize from Cython.Distutils import build_ext from torch.utils.cpp_extension import BuildExtension, CUDAExtension # Obtain the numpy include directory. This logic works across numpy versions. try: numpy_include = np.get_includ...
[ "setuptools.Extension", "Cython.Build.cythonize", "numpy.get_numpy_include", "numpy.get_include" ]
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import numpy as np def rotX(theta): return np.array([[1, 0, 0] , [0, np.cos(theta), -np.sin(theta)] , [0, np.sin(theta), np.cos(theta)]]) def rotY(theta): return np.array([[np.cos(theta), 0, np.sin(theta)] , [0, 1, 0] , [-np.sin(theta...
[ "numpy.cross", "numpy.diag", "numpy.array", "numpy.dot", "numpy.outer", "numpy.cos", "numpy.linalg.norm", "numpy.sin" ]
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#<NAME> from sklearn import preprocessing import matplotlib.pyplot as plt import numpy as np from sklearn.cluster import KMeans # Data set # Datos de 13/02/2020 a 10/11/2020 # De acuerdo con: https://tablerocovid.mspas.gob.gt/ # Regiones de acuerdo con: https://aprende.guatemala.com/historia/geografia/regiones-de-gua...
[ "sklearn.cluster.KMeans", "sklearn.preprocessing.LabelEncoder", "matplotlib.pyplot.ylabel", "matplotlib.pyplot.xlabel", "numpy.array", "matplotlib.pyplot.scatter", "matplotlib.pyplot.title", "matplotlib.pyplot.show" ]
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from imutils import contours from collections import deque import numpy as np import argparse import imutils import cv2 from Tkinter import Frame, Tk, BOTH, Text, Menu, END import tkFileDialog import os.path import os import sys from time import gmtime, strftime def PT(F): Time = strftime("%Y-%...
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import matplotlib.pyplot as plt import matplotlib as mpl import pandas as pd import numpy as np def dntrack(df: pd.DataFrame, rho: (list,str) = None, ntr: (list,str) = None, lims: list = None, lime: bool = False, dtick: bool =False, fill: bool =T...
[ "matplotlib.pyplot.gca", "numpy.linspace", "numpy.arange" ]
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import numpy import pylab import random n = 100000 x = numpy.zeros(n) y = numpy.zeros(n) for i in range(1, n): ran = random.randint(1, 4) if ran == 1: # rechts x[i] = x[i - 1] + 1 y[i] = y[i - 1] elif ran == 2: x[i] = x[i - 1] - 1 y[i] = y[i - 1] elif ran == 3: x[i] = x[i - 1] y[i] = y[i - 1] + 1 el...
[ "pylab.title", "pylab.plot", "numpy.zeros", "random.randint", "pylab.show" ]
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import numpy as np import dynet as dy from xnmt.modelparts.transforms import Linear from xnmt.persistence import serializable_init, Serializable, Ref from xnmt.events import register_xnmt_handler, handle_xnmt_event from xnmt.param_initializers import LeCunUniformInitializer from xnmt.param_collections import ParamMana...
[ "dynet.parameter", "xnmt.param_initializers.LeCunUniformInitializer", "dynet.pickneglogsoftmax_batch", "dynet.reshape", "dynet.softmax", "dynet.layer_norm", "dynet.dropout", "dynet.pickrange", "dynet.inputTensor", "dynet.transpose", "numpy.argwhere", "numpy.concatenate", "xnmt.param_collecti...
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import numpy as np from numpy import ndarray from numba import njit, prange __cache = True @njit(nogil=True, parallel=True, cache=__cache) def element_transformation_matrices(Q: ndarray, nNE: int=2): nE = Q.shape[0] nEVAB = nNE * 6 res = np.zeros((nE, nEVAB, nEVAB), dtype=Q.dtype) for iE in prange(nE)...
[ "numba.prange", "numpy.zeros", "numba.njit", "numpy.zeros_like" ]
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from __future__ import annotations import numpy as np import scipy.signal from functools import partial from typing import Callable try: import simpleaudio as sa except ModuleNotFoundError: raise ModuleNotFoundError("Please install simpleaudio to use this module.\n" "pip install ...
[ "numpy.abs", "numpy.asarray", "numpy.any", "numpy.squeeze", "functools.partial", "numpy.sin", "numpy.arange" ]
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#!/usr/bin/env python # # Author: <NAME> <<EMAIL>> # from functools import reduce import unittest import numpy from pyscf import lib from pyscf import gto from pyscf import scf from pyscf import mcscf from pyscf import ao2mo from pyscf import fci from pyscf.tools import molden from pyscf.grad import rhf as rhf_grad f...
[ "pyscf.gto.Mole", "pyscf.lib.fp", "pyscf.lib.light_speed", "pyscf.gto.M", "pyscf.ao2mo.kernel", "functools.reduce", "pyscf.grad.rhf.grad_nuc", "numpy.diag_indices", "pyscf.mcscf.CASSCF", "numpy.dot", "numpy.zeros", "numpy.einsum", "pyscf.grad.casscf.Gradients", "pyscf.lib.einsum", "unitt...
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# SM.NLMS.py # # Implements the Set-membership Normalized LMS algorithm for COMPLEX valued data. # (Algorithm 6.1 - book: Adaptive Filtering: Algorithms and Practical # Implementation, Diniz) # # Authors: # . <NAME> - <EMAIL> & <EMAIL> ...
[ "numpy.append", "numpy.array", "numpy.zeros", "time.time" ]
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import typing from typing import List import numpy as np class Solution: def minimumDifference( self, nums: List[int], k: int, ) -> int: a = np.array(nums) a.sort() k -= 1 return (a[k:] - a[:a.size - k]).min()
[ "numpy.array" ]
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import math, random, sys, os import numpy as np import pandas as pd import networkx as nx import func_timeout import tqdm from rdkit import RDLogger from rdkit.Chem import Descriptors from rdkit.Chem import rdmolops import rdkit.Chem.QED import torch from botorch.models import SingleTaskGP from botorch.fit import fit_...
[ "numpy.nanpercentile", "rdkit.Chem.Descriptors.MolLogP", "torch.max", "rdkit.Chem.rdmolops.GetAdjacencyMatrix", "torch.exp", "torch.min", "numpy.array", "numpy.nanmean", "torch.cuda.is_available", "botorch.acquisition.qNoisyExpectedImprovement", "numpy.percentile", "botorch.models.SingleTaskGP...
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from PIL import Image, ImageDraw from PIL.ImageChops import multiply import numpy as np try: import matplotlib.pyplot as plt except: print("### matplotlib.pyplot could not be imported.") def imshow(image): plt.imshow(image) plt.show() def pilshow(pil_image): imshow(np.asarray(pil_image)) def ...
[ "matplotlib.pyplot.imshow", "PIL.Image.open", "numpy.asarray", "PIL.ImageDraw.Draw", "PIL.ImageChops.multiply", "numpy.full", "matplotlib.pyplot.show" ]
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import numpy as np import pandas as pd from mia.estimators import ShadowModelBundle, prepare_attack_data from sklearn.ensemble import RandomForestClassifier from sklearn.utils import resample # depent on tensorflow 1.14 import tensorflow as tf from tensorflow import keras from tensorflow.keras.layers import Conv1D, A...
[ "numpy.mean", "tensorflow.keras.utils.to_categorical", "mia.estimators.prepare_attack_data", "pandas.read_csv", "tensorflow.keras.layers.AveragePooling1D", "tensorflow.keras.losses.BinaryCrossentropy", "tensorflow.keras.layers.Dropout", "mia.estimators.ShadowModelBundle", "sklearn.ensemble.RandomFor...
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from __future__ import print_function # pyDIA # # This software implements the difference-imaging algorithm of Bramich et al. (2010) # with mixed-resolution delta basis functions. It uses an NVIDIA GPU to do the heavy # processing. # # Subroutines deconvolve3_rows, deconvolve3_columns, resolve_coeffs_2d and # inte...
[ "c_interface_functions.compute_model_cuda", "numpy.sqrt", "io_functions.write_image", "photometry_functions.compute_psf_image", "numpy.argsort", "io_functions.get_date", "sys.exit", "data_structures.EmptyBase", "numpy.genfromtxt", "itertools.repeat", "data_structures.Observation", "os.path.exi...
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#!/usr/bin/env python """ Operations on surface mesh vertices. Authors: - <NAME>, 2012 (<EMAIL>) - <NAME>, 2012-2016 (<EMAIL>) http://binarybottle.com Copyright 2016, Mindboggle team (http://mindboggle.info), Apache v2.0 License """ def find_neighbors_from_file(input_vtk): """ Generate the list...
[ "itertools.chain", "mindboggle.guts.mesh.find_neighbors_from_file", "mindboggle.guts.mesh.find_neighbors", "mindboggle.guts.mesh.decimate.SetTargetReduction", "mindboggle.mio.vtks.rewrite_scalars", "numpy.sqrt", "vtk.vtkCellArray", "vtk.vtkDecimatePro", "vtk.vtkPoints", "numpy.array", "mindboggl...
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#!/usr/bin/env python # Filename: test_scripts """ introduction: authors: <NAME> email:<EMAIL> add time: 11 April, 2021 """ import os, sys import cv2 import numpy as np code_dir = os.path.join(os.path.dirname(os.path.abspath(__file__)), '..') sys.path.insert(0, code_dir) import datasets.raster_io as raster_io def ...
[ "cv2.rectangle", "numpy.mean", "sys.path.insert", "os.path.join", "datasets.raster_io.read_raster_all_bands_np", "numpy.ascontiguousarray", "cv2.imshow", "cv2.waitKey", "cv2.cvtColor", "os.path.abspath", "cv2.imread", "os.path.expanduser" ]
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# -*- coding: utf-8 -*- # ----------------------------------------------------------------------------- # (C) British Crown Copyright 2017-2019 Met Office. # All rights reserved. # # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions a...
[ "numpy.flip", "numpy.ones", "iris.coords.AuxCoord", "numpy.array", "improver.utilities.cube_manipulation.sort_coord_in_cube", "unittest.main", "improver.utilities.warnings_handler.ManageWarnings" ]
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''' Tasks which control a plant under pure machine control. Used typically for initializing BMI decoder parameters. ''' import numpy as np import time import os import pdb import multiprocessing as mp import pickle import tables import re import tempfile, traceback, datetime import riglib.bmi from riglib.stereo_opengl...
[ "numpy.ceil", "riglib.bmi.bmi.MachineOnlyFilter", "riglib.bmi.bmi.Decoder", "riglib.bmi.extractor.DummyExtractor", "riglib.bmi.state_space_models.StateSpaceEndptVel2D", "riglib.experiment.traits.OptionsList" ]
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import os import sys import random import numpy as np sys.path.insert(1, os.path.join(sys.path[0], '..')) from h01_data.parse import get_data as get_raw_data from h02_learn.model import opt_params from h02_learn.train import convert_to_loader, _run_language, write_csv, get_data from utils import argparser from utils i...
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import numpy as np import pytest from ansys import dpf from ansys.dpf import core from ansys.dpf.core import FieldDefinition from ansys.dpf.core import operators as ops from ansys.dpf.core.common import locations, shell_layers @pytest.fixture() def stress_field(allkindofcomplexity): model = dpf.core.Model(allkind...
[ "ansys.dpf.core.Model", "ansys.dpf.core.Field", "ansys.dpf.core.DataSources", "numpy.array", "pytest.fixture", "ansys.dpf.core.fields_factory.create_3d_vector_field", "ansys.dpf.core.Operator", "numpy.arange", "ansys.dpf.core.Dimensionality.scalar_dim", "ansys.dpf.core.operators.logic.identical_fi...
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import sys import importlib import argparse import numpy as np import random import cmath import math from dft import dft, inv_dft from fft import fft, inv_fft from rsa import * #arguments for dft, fft, inverse dft and inverse fft parameters1 = [] parameters2 = [] i=4 while i<2048: param1 = list(...
[ "numpy.array_equiv", "numpy.fft.fft", "numpy.array", "numpy.random.randint", "dft.dft", "fft.fft" ]
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"""Tests for io.py. """ import os import pytest import tempfile import unittest.mock as mock import numpy as np import pandas as pd import cytoxnet.dataprep.io import cytoxnet.data def test_load_data(): """Test the load_data function. Should be able to find files, and package data. Also dropping nans ...
[ "tempfile.TemporaryDirectory", "pandas.read_csv", "os.path.join", "os.path.realpath", "pytest.raises", "numpy.array_equal", "pandas.DataFrame", "unittest.mock.patch" ]
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import datetime as dtm from profile_plot import profile_plot import matplotlib.pyplot as plt from matplotlib.font_manager import fontManager, FontProperties from matplotlib import ticker, cm import sys import pandas as pd import numpy as np import os import re from dateutil import parser import errno from shutil import...
[ "re.compile", "numpy.argsort", "numpy.array", "datetime.timedelta", "os.strerror", "numpy.arange", "datetime.datetime", "os.path.exists", "textwrap.dedent", "os.listdir", "numpy.searchsorted", "subprocess.Popen", "matplotlib.pyplot.style.use", "numpy.round", "dateutil.parser.parse", "n...
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# -*- coding: utf-8 -*- # ----------------------------------------------------------------------------- # Copyright (c) 2022- <NAME> # # Distributed under the terms of the MIT License # (see wavespin/__init__.py for details) # ----------------------------------------------------------------------------- from ...fronten...
[ "math.sqrt", "math.log2", "numpy.isnan", "copy.deepcopy", "warnings.warn", "numpy.cumsum" ]
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# -*- coding: utf-8 -*- import unittest from .. import distributions from scipy.integrate import quad import numpy as np import scipy.stats class test_distributions(unittest.TestCase): def _check_pdfintegral(self, integral, integrale, theory): integrale = max(integrale, 1e-5) limits = integral ...
[ "unittest.TestSuite", "scipy.integrate.quad", "numpy.array", "numpy.linspace", "sys.exit", "unittest.TextTestRunner", "matplotlib.pyplot.show" ]
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#Exercício: Ler uma imagem, converter em escala de cinza, # utilizando a seguinte fórmula: # Gr = R*0,25 + G*0,65 + B*0,1 #ler o seu histograma e verificar qual o nível de cor # possui maior intensidade na imagem. Imprima o histograma. # A partir da imagem do histograma, identifique um limiar # para fazer a limiarizaçã...
[ "cv2.calcHist", "cv2.threshold", "matplotlib.pyplot.plot", "numpy.argmax", "cv2.imshow", "numpy.zeros", "cv2.waitKey", "matplotlib.pyplot.xlim", "cv2.imread", "matplotlib.pyplot.show" ]
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import numpy as np from dask import array as da from typing import Tuple, List, Iterable import pyqtgraph as pg import skbeam.core.correlation as corr from xicam.SAXS.patches.pyFAI import AzimuthalIntegrator from xicam.core.intents import PlotIntent from xicam.core import msg from xicam.plugins.operationplugin import...
[ "xicam.plugins.operationplugin.output_names", "xicam.plugins.operationplugin.visible", "numpy.mean", "xicam.plugins.operationplugin.intent", "numpy.flipud", "xicam.core.msg.notifyMessage", "numpy.min", "xicam.plugins.operationplugin.display_name", "xicam.plugins.operationplugin.input_names", "xica...
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# Author: <NAME> <<EMAIL>> # My imports from . import constants # Regular imports from datetime import datetime from copy import deepcopy from scipy import signal import numpy as np import warnings import librosa import random import torch # TODO - torch Tensor compatibility # TODO - try to ensure these won't brea...
[ "scipy.signal.convolve", "librosa.midi_to_hz", "torch.from_numpy", "numpy.argsort", "numpy.array", "librosa.util.pad_center", "copy.deepcopy", "librosa.hz_to_midi", "numpy.arange", "numpy.mean", "numpy.savez", "numpy.reshape", "numpy.where", "numpy.sort", "numpy.diff", "numpy.max", "...
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import numpy as np def integrand_sin(x): return x**2 * np.sin(x) def simpson(f, a, b, nstrips): x, dx = np.linspace(a, b, num=2*nstrips+1, endpoint=True, retstep=True) return dx / 3 * (f(x[0]) + f(x[-1]) + 4 * np.sum(f(x[1:-1:2])) + 2 * np.sum(f(x[2:-1:2]))) nstrips_all = 10 * 2**np.arange(8) dx = 1 / ns...
[ "numpy.sin", "numpy.linspace", "numpy.cos", "numpy.arange" ]
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""" Tests for domain helpers. """ # pylint: disable=missing-docstring from __future__ import division from __future__ import absolute_import from __future__ import print_function import numpy as np import numpy.testing as nt import scipy.optimize as spop import copy import reggie.core.domains as domains ### BASE ...
[ "numpy.testing.assert_allclose", "reggie.core.domains.Log", "numpy.array", "copy.deepcopy", "copy.copy", "scipy.optimize.approx_fprime", "reggie.core.domains.Identity" ]
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""" Authors: <NAME>, <NAME>, <NAME> """ import numpy as np import scipy.stats as spst import scipy.linalg as la class LQFilter: def __init__(self, d, h, y_m, r=None, h_eps=None, β=None): """ Parameters ---------- d : list or numpy.array (1-D or a 2-D column vector) ...
[ "scipy.linalg.lu", "numpy.eye", "numpy.linalg.solve", "numpy.prod", "numpy.asarray", "numpy.roots", "numpy.diag", "scipy.linalg.cholesky", "numpy.zeros", "numpy.vstack", "numpy.poly1d", "scipy.linalg.inv", "numpy.arange" ]
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import numpy as np import matplotlib.pyplot as plt import seaborn as sns from ..layers.LayerSandPileReservoir import LayerSandPileReservoir from ..layers.LayerLinearRegression import LayerLinearRegression from .LayeredModel import LayeredModel class SandPileModel(LayeredModel): def __init__(self, input_size, ou...
[ "numpy.shape", "matplotlib.pyplot.plot", "seaborn.heatmap" ]
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from __future__ import absolute_import, division, print_function import numpy as np from simdna.util import DEFAULT_LETTER_TO_INDEX from simdna import util import math class PWM(object): def __init__(self, name, letterToIndex=DEFAULT_LETTER_TO_INDEX): self.name = name self.letterToIndex = letterT...
[ "numpy.array", "numpy.log", "simdna.util.sampleFromProbsArr", "numpy.argmax" ]
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from unittest.case import TestCase import unittest import pandas as pd import numpy as np from datetime import datetime from qlib import init from qlib.config import C from qlib.log import TimeInspector from qlib.utils.time import cal_sam_minute as cal_sam_minute_new, get_min_cal def cal_sam_minute(x, sam_minutes): ...
[ "datetime.datetime", "qlib.utils.time.get_min_cal", "numpy.random.choice", "pandas.Timedelta", "qlib.utils.time.cal_sam_minute", "qlib.log.TimeInspector.logt", "qlib.init", "unittest.main" ]
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import numpy as np import cv2,os cam=cv2.VideoCapture(0) face_cascade=cv2.CascadeClassifier("haarcascade_frontalface_alt.xml") face_data=[] path="./data/" if not os.path.exists(path): os.mkdir(path) file_name=input("Enter the name") cnt=0 while True: ret,frame=cam.read() if ret==False: break faces=face_cascade.de...
[ "cv2.rectangle", "os.path.exists", "numpy.asarray", "cv2.imshow", "cv2.destroyAllWindows", "cv2.VideoCapture", "os.mkdir", "cv2.CascadeClassifier", "cv2.resize", "cv2.waitKey", "numpy.save" ]
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#! /usr/bin/env python """ Module for generating an RBF approximation of temporal dynamics in POD basis space """ import numpy as np import scipy from scipy.spatial.distance import cdist from numpy.lib.scimath import sqrt as csqrt from scipy import interpolate import pod as pod import greedy as gdy import rom as rom...
[ "numpy.prod", "numpy.linalg.solve", "numpy.sqrt", "numpy.amin", "numpy.power", "numpy.searchsorted", "scipy.spatial.distance.cdist", "numpy.linalg.cond", "numpy.exp", "numpy.zeros", "numpy.empty", "numpy.nonzero", "numpy.linalg.norm", "numpy.amax", "numpy.arange" ]
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# harmonypy - A data alignment algorithm. # Copyright (C) 2018 <NAME> # 2019 <NAME> <<EMAIL>> # # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by # the Free Software Foundation, either version 3 of the License, o...
[ "logging.getLogger", "logging.StreamHandler", "numpy.log", "numpy.array_split", "numpy.array", "numpy.isfinite", "numpy.linalg.norm", "numpy.arange", "numpy.multiply", "scipy.cluster.vq.kmeans", "numpy.repeat", "numpy.max", "numpy.exp", "numpy.dot", "numpy.random.seed", "numpy.round", ...
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from numbers import Real, Integral import numpy as np import openmc.checkvalue as cv from .angle_energy import AngleEnergy from .endf import get_cont_record class NBodyPhaseSpace(AngleEnergy): """N-body phase space distribution Parameters ---------- total_mass : float Total mass of product p...
[ "openmc.checkvalue.check_greater_than", "numpy.string_", "openmc.checkvalue.check_type" ]
[((1479, 1516), 'openmc.checkvalue.check_type', 'cv.check_type', (['name', 'total_mass', 'Real'], {}), '(name, total_mass, Real)\n', (1492, 1516), True, 'import openmc.checkvalue as cv\n'), ((1525, 1569), 'openmc.checkvalue.check_greater_than', 'cv.check_greater_than', (['name', 'total_mass', '(0.0)'], {}), '(name, tot...
from PIL import Image import numpy as np import math def symmetric_pad_img(origin_img, pad_pixel=100): origin_img_array = np.array(origin_img) padded_img_array = np.pad(origin_img_array, pad_width=((pad_pixel, pad_pixel), (pad_pixel, pad_pixel), (0, 0)), ...
[ "PIL.Image.fromarray", "PIL.Image.open", "math.ceil", "PIL.Image.new", "numpy.array", "numpy.pad" ]
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# -*- coding: utf-8 -*- import numpy as np import pandas as pd from matplotlib import pyplot as plt from sympy import * def session2(): a = np.array([1, 2, 3]) b = np.array([4, 5, 6]) c = a + b print("矩阵加法", c) d = a - b print("矩阵减法", d) e = a * b print("矩阵乘法", e) f = np.dot(a, b) ...
[ "sklearn.preprocessing.PolynomialFeatures", "pandas.read_csv", "numpy.arange", "sklearn.model_selection.train_test_split", "numpy.size", "matplotlib.pyplot.plot", "sklearn.datasets.load_boston", "tushare.get_hist_data", "sklearn.preprocessing.StandardScaler", "numpy.array", "numpy.dot", "numpy...
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import pandapower as pp import pytest from numpy import array @pytest.fixture() def base_net(): net = pp.create_empty_network() pp.create_bus(net, vn_kv=10) pp.create_bus(net, vn_kv=10) pp.create_ext_grid(net, 0) pp.create_load(net, 1, p_kw=200, controllable=False) pp.create_line_from_parameter...
[ "pandapower.create_sgen", "pandapower.create_ext_grid", "pandapower.create_empty_network", "pandapower.create_line_from_parameters", "pandapower.create_load", "pandapower.runopp", "pandapower.create_gen", "pytest.main", "numpy.array", "pytest.fixture", "pandapower.runpp", "pandapower.create_bu...
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import numpy as np import matplotlib.pyplot as plt import networkx as nx from functools import lru_cache import cupy as cp from cupyx.scipy.sparse import csr_matrix as csr_gpu import itertools import time import os import pickle import scipy import random import correlation_module import sys sys.path.insert(0, "../../....
[ "sys.path.insert", "pickle.dump", "numpy.random.rand", "cupy.random.rand", "networkx.adjacency_matrix", "networkx.selfloop_edges", "networkx.DiGraph", "networkx.generators.degree_seq.configuration_model", "numpy.random.pareto", "numpy.count_nonzero", "numpy.array", "scipy.sparse.coo_matrix", ...
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""" Simulation of binary floating point representation at arbitrary fixed or infinite precision (including greater than 64 bit). :name: Simfloat :author: <NAME> :version: 0.2 :date: August 2008 Updated to version 0.2 for full Python 3 compatibility in 2020. """ import numpy as np import math import decimal from dec...
[ "decimal.getcontext", "numpy.alltrue", "numpy.sometrue", "numpy.array", "numpy.zeros", "numpy.isfinite", "numpy.sign", "decimal.Decimal" ]
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#!/usr/bin/env python import time import rospy import math import copy import numpy from std_msgs.msg import Float64 from sensor_msgs.msg import JointState from nav_msgs.msg import Odometry from geometry_msgs.msg import Point from tf.transformations import euler_from_quaternion class CubeRLUtils(object): def __i...
[ "tf.transformations.euler_from_quaternion", "rospy.logerr", "rospy.Subscriber", "std_msgs.msg.Float64", "rospy.is_shutdown", "rospy.init_node", "rospy.wait_for_message", "time.sleep", "numpy.array", "geometry_msgs.msg.Point", "rospy.Rate", "numpy.linalg.norm", "rospy.Publisher", "rospy.log...
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import sklearn from sklearn import metrics import numpy as np import pandas as pd import re class MetricsCls: """ Requirement: metric functions under the class should always have the y_true, and y_pred args. Examples: >>> obj=MetricsCls(config={'MAPE__version':'sklearn'}) >...
[ "numpy.abs", "numpy.average", "numpy.diff", "sklearn.metrics.mean_squared_error", "numpy.array", "sklearn.metrics.mean_absolute_percentage_error", "pandas.DataFrame", "sklearn.metrics.mean_absolute_error", "numpy.round" ]
[((2860, 2970), 'sklearn.metrics.mean_absolute_error', 'sklearn.metrics.mean_absolute_error', (['y_true', 'y_pred'], {'sample_weight': 'sample_weight', 'multioutput': 'multioutput'}), '(y_true, y_pred, sample_weight=\n sample_weight, multioutput=multioutput)\n', (2895, 2970), False, 'import sklearn\n'), ((3111, 3237...
import InstrumentDriver import numpy as np class Driver(InstrumentDriver.InstrumentWorker): """ This class implements a simple signal generator driver""" def performOpen(self, options={}): """Perform the operation of opening the instrument connection""" pass def performClose(self, b...
[ "numpy.sin", "numpy.linspace" ]
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from typing import Union import numpy as np def moore_n( n: int, position: tuple, grid: np.ndarray, invariant: Union[int, np.ndarray] = 0 ): """Gets the N Moore neighborhood at given postion.""" row, col = position nrows, ncols = grid.shape # Target offsets from position. ofup, ofdo = row +...
[ "numpy.array", "collections.namedtuple", "numpy.repeat" ]
[((5197, 5315), 'collections.namedtuple', 'namedtuple', (['"""Neighbors"""', "['up_left', 'up', 'up_right', 'left', 'self', 'right', 'down_left', 'down',\n 'down_right']"], {}), "('Neighbors', ['up_left', 'up', 'up_right', 'left', 'self',\n 'right', 'down_left', 'down', 'down_right'])\n", (5207, 5315), False, 'fr...
from nose.plugins.attrib import attr import os import numpy as np import pandas as pd from pandas import Series, DataFrame import trackpy from trackpy import plots from trackpy.utils import suppress_plotting, fit_powerlaw from trackpy.tests.common import StrictTestCase import nose # Quiet warnings about Axes not be...
[ "pandas.Series", "trackpy.plots.plot_traj", "nose.plugins.attrib.attr", "pandas.DataFrame", "os.path.join", "trackpy.utils.fit_powerlaw", "nose.runmodule", "nose.SkipTest", "numpy.random.randint", "trackpy.utils.suppress_plotting", "trackpy.plots.annotate3d", "trackpy.plots.annotate", "os.pa...
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import torch import os import time import numpy as np from tqdm import tqdm from collections import OrderedDict from torch import optim from torch import nn from torchvision.utils import save_image class Base: def _get_stats(self, dict_, mode): stats = OrderedDict({}) for key in dict_.keys(): ...
[ "numpy.mean", "collections.OrderedDict", "os.path.exists", "os.makedirs", "time.time" ]
[((267, 282), 'collections.OrderedDict', 'OrderedDict', (['{}'], {}), '({})\n', (278, 282), False, 'from collections import OrderedDict\n'), ((341, 360), 'numpy.mean', 'np.mean', (['dict_[key]'], {}), '(dict_[key])\n', (348, 360), True, 'import numpy as np\n'), ((1298, 1309), 'time.time', 'time.time', ([], {}), '()\n',...
# Copyright 2021 DeepMind Technologies Limited. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agre...
[ "neural_lns.data_utils.get_features", "collections.deque", "neural_lns.mip_utils.is_var_binary", "neural_lns.local_branching_expert.get_lns_lp_solution", "os.path.join", "ml_collections.ConfigDict", "absl.logging.warning", "numpy.zeros", "numpy.concatenate", "neural_lns.local_branching_expert.impr...
[((1221, 1311), 'ml_collections.ConfigDict', 'ml_collections.ConfigDict', (["{'seed': 42, 'time_limit_seconds': 1800, 'relative_gap': 0}"], {}), "({'seed': 42, 'time_limit_seconds': 1800,\n 'relative_gap': 0})\n", (1246, 1311), False, 'import ml_collections\n'), ((1554, 1590), 'os.path.join', 'os.path.join', (['data...
import os import pandas as pd import numpy as np import pickle import argparse ## torch packages import torch from transformers import BertTokenizer,AutoTokenizer import re ## for visualisation import matplotlib.pyplot as plt import collections ## custom packages from extract_lexicon import get_arousal_vec,get_valenc...
[ "pickle.dump", "argparse.ArgumentParser", "pandas.read_csv", "os.path.join", "extract_lexicon.get_valence_vec", "pandas.DataFrame.from_dict", "extract_lexicon.get_arousal_vec", "extract_lexicon.get_dom_vec", "numpy.zeros", "utils.tweet_preprocess", "transformers.AutoTokenizer.from_pretrained" ]
[((538, 558), 'numpy.zeros', 'np.zeros', (['class_size'], {}), '(class_size)\n', (546, 558), True, 'import numpy as np\n'), ((4752, 4797), 'transformers.AutoTokenizer.from_pretrained', 'AutoTokenizer.from_pretrained', (['tokenizer_type'], {}), '(tokenizer_type)\n', (4781, 4797), False, 'from transformers import BertTok...
# Copyright 2021 Huawei Technologies Co., Ltd # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to...
[ "mindspore.common.initializer.Uniform", "mindspore.common.initializer.HeUniform", "mindspore.nn.SequentialCell", "numpy.ones", "mindspore.nn.AvgPool2d", "mindspore.nn.MaxPool2d", "mindspore.ops.operations.Transpose", "mindspore.nn.BatchNorm2d", "math.sqrt", "mindspore.common.initializer.HeNormal",...
[((1096, 1154), 'mindspore.nn.Conv2d', 'nn.Conv2d', (['inplanes', 'planes'], {'kernel_size': '(1)', 'has_bias': '(False)'}), '(inplanes, planes, kernel_size=1, has_bias=False)\n', (1105, 1154), True, 'import mindspore.nn as nn\n'), ((1174, 1196), 'mindspore.nn.BatchNorm2d', 'nn.BatchNorm2d', (['planes'], {}), '(planes)...
# -*- coding: utf-8 -*- """ Created on Mon Apr 15 16:06:04 2019 @author: <NAME> """ # https://realpython.com/python-web-scraping-practical-introduction/ from bs4 import BeautifulSoup import pandas as pd import numpy as np import string import time import math import datetime abstracts = [] from nltk.corpus import sto...
[ "webscraper_functions.simple_get", "nltk.corpus.stopwords.words", "pandas.read_csv", "datetime.datetime.strptime", "webscraper_functions.get_abstract", "time.sleep", "bs4.BeautifulSoup", "webscraper_functions.string_parse2", "string.capwords", "webscraper_functions.string_parse1", "pandas.DataFr...
[((2772, 2787), 'numpy.arange', 'np.arange', (['(0)', '(1)'], {}), '(0, 1)\n', (2781, 2787), True, 'import numpy as np\n'), ((9705, 9914), 'pandas.DataFrame', 'pd.DataFrame', ([], {'data': "{'Topics_split': topics_split, 'Topics': topics, 'Authors': authors,\n 'Titles': titles, 'Journals': journals, 'Years': years, ...
# -*- coding: utf-8 -*- """ Created on Fri Nov 16 12:05:08 2018 @author: Alexandre """ ############################################################################### import numpy as np ############################################################################### from pyro.dynamic import pendulum from pyro.control ...
[ "numpy.array", "pyro.control.linear.PIDController", "numpy.zeros", "pyro.dynamic.pendulum.SinglePendulum.h" ]
[((967, 999), 'pyro.control.linear.PIDController', 'linear.PIDController', (['kp', 'ki', 'kd'], {}), '(kp, ki, kd)\n', (987, 999), False, 'from pyro.control import linear\n'), ((1024, 1040), 'numpy.array', 'np.array', (['[3.14]'], {}), '([3.14])\n', (1032, 1040), True, 'import numpy as np\n'), ((725, 765), 'pyro.dynami...
# # This code is for detecting proper region of the plate # with the combined approach # # imports import cv2 import imutils import numpy as np from imutils import paths # import RDetectPlates as detplt from imutils import perspective import matplotlib.pyplot as plt import sklearn as sk from sklearn.decomposition impor...
[ "cv2.rectangle", "imutils.perspective.four_point_transform", "numpy.array", "imutils.paths.list_images", "matplotlib.pyplot.imshow", "cv2.threshold", "cv2.erode", "numpy.max", "matplotlib.pyplot.close", "cv2.minAreaRect", "numpy.min", "Regressor_01.Regression_plt", "cv2.boxPoints", "cv2.mo...
[((722, 743), 'cv2.imread', 'cv2.imread', (['imgs[rnd]'], {}), '(imgs[rnd])\n', (732, 743), False, 'import cv2\n'), ((749, 765), 'matplotlib.pyplot.imshow', 'plt.imshow', (['gimg'], {}), '(gimg)\n', (759, 765), True, 'import matplotlib.pyplot as plt\n'), ((770, 781), 'matplotlib.pyplot.close', 'plt.close', ([], {}), '(...
#!/usr/bin/env python3 import numpy as np from gym import spaces from gym.utils import seeding from learn2learn.gym.envs.meta_env import MetaEnv class Particles2DEnv(MetaEnv): """ [[Source]](https://github.com/learnables/learn2learn/blob/master/learn2learn/gym/envs/particles/particles_2d.py) **Descript...
[ "numpy.clip", "numpy.abs", "numpy.sqrt", "gym.spaces.Box", "numpy.zeros", "gym.utils.seeding.np_random" ]
[((756, 822), 'gym.spaces.Box', 'spaces.Box', ([], {'low': '(-np.inf)', 'high': 'np.inf', 'shape': '(2,)', 'dtype': 'np.float32'}), '(low=-np.inf, high=np.inf, shape=(2,), dtype=np.float32)\n', (766, 822), False, 'from gym import spaces\n'), ((895, 955), 'gym.spaces.Box', 'spaces.Box', ([], {'low': '(-0.1)', 'high': '(...
import json import numpy as np import os import pickle import sklearn.metrics import time from chapydette import cp_estimation def load_features(cruise, features_dir, projection_dim, subsample_num=1, subsample_of=1): """ Load features for a cruise. :param cruise: Cruise to load features for. :param ...
[ "numpy.median", "numpy.sqrt", "os.path.join", "numpy.percentile", "time.time", "numpy.round" ]
[((1742, 1758), 'numpy.median', 'np.median', (['dists'], {}), '(dists)\n', (1751, 1758), True, 'import numpy as np\n'), ((1890, 1915), 'numpy.sqrt', 'np.sqrt', (['(1 / (2 * gammas))'], {}), '(1 / (2 * gammas))\n', (1897, 1915), True, 'import numpy as np\n'), ((10935, 10946), 'time.time', 'time.time', ([], {}), '()\n', ...
import numpy as np import skimage.segmentation import skimage.io import keras.backend as K import tensorflow as tf debug = False def channel_precision(channel, name): def precision_func(y_true, y_pred): y_pred_tmp = K.cast(tf.equal( K.argmax(y_pred, axis=-1), channel), "float32") true_positives = ...
[ "keras.backend.clip", "numpy.argmax", "numpy.max", "keras.backend.argmax", "numpy.sum", "numpy.empty", "keras.backend.epsilon", "numpy.full", "numpy.zeros_like" ]
[((1574, 1588), 'numpy.max', 'np.max', (['labels'], {}), '(labels)\n', (1580, 1588), True, 'import numpy as np\n'), ((1637, 1675), 'numpy.zeros_like', 'np.zeros_like', (['labels'], {'dtype': 'np.uint16'}), '(labels, dtype=np.uint16)\n', (1650, 1675), True, 'import numpy as np\n'), ((2484, 2554), 'numpy.argmax', 'np.arg...
""" Add samples This script takes a wav file that must have n peaks and create n different files for each peak. """ import numpy as np from scipy.io.wavfile import read,write import peakutils, os # average # 3169 / 2 = 1584.5 side = 10000 # The stander for the peaks stander = 0 """ Write the .wav file """ def exp...
[ "numpy.array", "scipy.io.wavfile.read", "scipy.io.wavfile.write", "os.getcwd" ]
[((353, 380), 'scipy.io.wavfile.write', 'write', (['filename', 'rate', 'data'], {}), '(filename, rate, data)\n', (358, 380), False, 'from scipy.io.wavfile import read, write\n'), ((1462, 1476), 'scipy.io.wavfile.read', 'read', (['filenmae'], {}), '(filenmae)\n', (1466, 1476), False, 'from scipy.io.wavfile import read, ...
import warnings import csv import os import matplotlib.pyplot as plt import numpy as np import pandas as pd import tensorflow as tf from models.cnn_models import CNN1 from sklearn.model_selection import train_test_split from tensorflow.keras.utils import to_categorical, plot_model # gpus = tf.config.experimental.li...
[ "matplotlib.pyplot.imshow", "tensorflow.keras.utils.to_categorical", "matplotlib.pyplot.savefig", "tensorflow.config.experimental.set_memory_growth", "sklearn.model_selection.train_test_split", "csv.writer", "models.cnn_models.CNN1", "numpy.argmax", "tensorflow.keras.utils.plot_model", "numpy.arra...
[((412, 463), 'tensorflow.config.experimental.list_physical_devices', 'tf.config.experimental.list_physical_devices', (['"""GPU"""'], {}), "('GPU')\n", (456, 463), True, 'import tensorflow as tf\n'), ((485, 536), 'tensorflow.config.experimental.set_memory_growth', 'tf.config.experimental.set_memory_growth', (['gpu', '(...
#!/usr/bin/env python # -*- coding: utf-8 -*- """ Script doing the actual virtual screening of a library of compounds over a previously built Bayesian model. """ import argparse import logging import numpy as np import csv import json import math from rdkit import Chem import common __author__ = "<NA...
[ "numpy.mean", "argparse.ArgumentParser", "math.floor", "common.to_float", "common.fragments_extraction", "math.log", "common.delete_files", "numpy.array", "common.init_logging", "common.descriptors_extraction", "json.load", "common.open_file", "math.isnan" ]
[((1746, 1791), 'math.log', 'math.log', (["(probs['active'] / probs['inactive'])"], {}), "(probs['active'] / probs['inactive'])\n", (1754, 1791), False, 'import math\n'), ((4903, 4921), 'numpy.array', 'np.array', (['features'], {}), '(features)\n', (4911, 4921), True, 'import numpy as np\n'), ((6717, 6738), 'common.ini...
""" impyute.imputation.ts.locf """ import numpy as np from impyute.util import find_null from impyute.util import checks from impyute.util import preprocess @preprocess @checks def locf(data, axis=0): """ Last Observation Carried Forward For each set of missing indices, use the value of one row before(same ...
[ "numpy.shape", "numpy.transpose", "impyute.util.find_null", "numpy.isnan" ]
[((1025, 1040), 'impyute.util.find_null', 'find_null', (['data'], {}), '(data)\n', (1034, 1040), False, 'from impyute.util import find_null\n'), ((958, 976), 'numpy.transpose', 'np.transpose', (['data'], {}), '(data)\n', (970, 976), True, 'import numpy as np\n'), ((1398, 1426), 'numpy.isnan', 'np.isnan', (['data[x_i + ...
#Filename: initialize.py #Institute: IIT Roorkee import torch.nn as nn import numpy as np def weights_init_kaimingUniform(module): for m in module.modules(): if isinstance(m, nn.Conv2d): nn.init.kaiming_uniform_(m.weight, mode = 'fan_in', nonlinearity = 'relu') if m.bias is not No...
[ "numpy.sqrt", "torch.nn.init.constant_", "torch.nn.init.kaiming_normal_", "torch.nn.init.kaiming_uniform_", "torch.nn.init.uniform_", "torch.nn.init.normal_" ]
[((214, 284), 'torch.nn.init.kaiming_uniform_', 'nn.init.kaiming_uniform_', (['m.weight'], {'mode': '"""fan_in"""', 'nonlinearity': '"""relu"""'}), "(m.weight, mode='fan_in', nonlinearity='relu')\n", (238, 284), True, 'import torch.nn as nn\n'), ((851, 920), 'torch.nn.init.kaiming_normal_', 'nn.init.kaiming_normal_', (...
import os import tempfile import numpy as np from microscopium.screens.cellomics import SPIRAL_CLOCKWISE_RIGHT_25 from microscopium import preprocess as pre from microscopium import io as mio import pytest import warnings @pytest.fixture def image_files(): # for clarity we define images as integer arrays in [0, 1...
[ "numpy.clip", "numpy.testing.assert_equal", "numpy.array", "microscopium.io.temporary_file", "numpy.random.RandomState", "os.remove", "microscopium.preprocess.correct_multiimage_illumination", "numpy.testing.assert_array_almost_equal", "microscopium.preprocess.montage_with_missing", "microscopium....
[((3552, 3610), 'pytest.mark.parametrize', 'pytest.mark.parametrize', (['"""fns, expected"""', 'missing_test_fns'], {}), "('fns, expected', missing_test_fns)\n", (3575, 3610), False, 'import pytest\n'), ((4590, 4676), 'pytest.mark.parametrize', 'pytest.mark.parametrize', (['"""missing, order, rows, cols, expected"""', ...
#! /usr/bin/env python import _pickle as cPickle, gzip import numpy as np from tqdm import tqdm import torch import torch.autograd as autograd import torch.nn.functional as F import torch.nn as nn import sys sys.path.append("..") import utils from utils import * from train_utils import batchify_data, run_epoch, train_...
[ "torch.manual_seed", "torch.nn.ReLU", "torch.nn.LeakyReLU", "train_utils.batchify_data", "train_utils.train_model", "numpy.random.seed", "torch.nn.Linear", "sys.path.append", "numpy.random.shuffle" ]
[((209, 230), 'sys.path.append', 'sys.path.append', (['""".."""'], {}), "('..')\n", (224, 230), False, 'import sys\n'), ((816, 846), 'numpy.random.shuffle', 'np.random.shuffle', (['permutation'], {}), '(permutation)\n', (833, 846), True, 'import numpy as np\n'), ((997, 1040), 'train_utils.batchify_data', 'batchify_data...
from __future__ import print_function import os import sys import pickle import json import datetime from collections import namedtuple import numpy as np import sqlite3 from sqlalchemy import create_engine from sqlalchemy_utils import drop_database from sqlalchemy.orm import sessionmaker from sqlalchemy.exc import Int...
[ "sqlalchemy.orm.sessionmaker", "sqlalchemy_utils.drop_database", "analysis.delayedfeedback.database.EventType", "datetime.datetime.fromtimestamp", "sqlalchemy.create_engine", "os.path.join", "numpy.diff", "analysis.delayedfeedback.database.Subject", "analysis.delayedfeedback.database.Base.metadata.c...
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import yake import gensim import numpy as np import itertools import nltk from nltk.corpus import stopwords def extract_keywords(text): """ Extract keywords from a text using yake model. """ # extract keywords kw_extractor = yake.KeywordExtractor() keywords = kw_extractor.extract_keywords(text...
[ "yake.KeywordExtractor", "gensim.models.KeyedVectors.load_word2vec_format", "numpy.argsort", "numpy.zeros", "numpy.linalg.norm" ]
[((247, 270), 'yake.KeywordExtractor', 'yake.KeywordExtractor', ([], {}), '()\n', (268, 270), False, 'import yake\n'), ((914, 927), 'numpy.zeros', 'np.zeros', (['(300)'], {}), '(300)\n', (922, 927), True, 'import numpy as np\n'), ((1128, 1242), 'gensim.models.KeyedVectors.load_word2vec_format', 'gensim.models.KeyedVect...
#!/usr/bin/env python import matplotlib.pyplot as plt import numpy as np from utils import util from scipy.special import logit import sklearn.linear_model as lm from sklearn.linear_model import LogisticRegressionCV, LogisticRegression from sklearn.metrics.pairwise import linear_kernel, polynomial_kernel, rbf_kernel f...
[ "sklearn.preprocessing.PolynomialFeatures", "sklearn.metrics.pairwise.rbf_kernel", "scipy.stats.multivariate_normal", "matplotlib.pyplot.pcolormesh", "numpy.random.RandomState", "numpy.linspace", "matplotlib.pyplot.scatter", "numpy.eye", "matplotlib.pyplot.savefig", "numpy.ones", "sklearn.metric...
[((3144, 3154), 'matplotlib.pyplot.show', 'plt.show', ([], {}), '()\n', (3152, 3154), True, 'import matplotlib.pyplot as plt\n'), ((477, 501), 'numpy.random.RandomState', 'np.random.RandomState', (['(0)'], {}), '(0)\n', (498, 501), True, 'import numpy as np\n'), ((1089, 1110), 'sklearn.preprocessing.PolynomialFeatures'...
#! /usr/bin/python # -*- coding: utf-8 -*- # @Time : 2017/6/21 12:26 # @Author : HouJP # @Email : <EMAIL> import ConfigParser import random import numpy as np from scipy import sparse from bin.featwheel.utils import LogUtil from ..featwheel.feature import Feature from ..postprocessor import PostProcessor cl...
[ "numpy.array", "random.random", "bin.featwheel.utils.LogUtil.log", "ConfigParser.ConfigParser" ]
[((434, 461), 'ConfigParser.ConfigParser', 'ConfigParser.ConfigParser', ([], {}), '()\n', (459, 461), False, 'import ConfigParser\n'), ((2935, 3002), 'bin.featwheel.utils.LogUtil.log', 'LogUtil.log', (['"""INFO"""', "('save train features (%s) done' % feature_name)"], {}), "('INFO', 'save train features (%s) done' % fe...
""" This RNN is used for predicting stock trends of the Google stock. @Editor: <NAME> """ import numpy as np import matplotlib.pyplot as plt import pandas as pd from sklearn.preprocessing import MinMaxScaler from keras.models import Sequential from keras.layers import Dense from keras.layers import LSTM from keras.l...
[ "numpy.reshape", "pandas.read_csv", "matplotlib.pyplot.ylabel", "matplotlib.pyplot.xlabel", "matplotlib.pyplot.plot", "keras.models.Sequential", "numpy.array", "keras.layers.LSTM", "keras.layers.Dropout", "pandas.concat", "keras.layers.Dense", "matplotlib.pyplot.title", "sklearn.preprocessin...
[((497, 540), 'pandas.read_csv', 'pd.read_csv', (['"""Google_Stock_Price_Train.csv"""'], {}), "('Google_Stock_Price_Train.csv')\n", (508, 540), True, 'import pandas as pd\n'), ((784, 829), 'sklearn.preprocessing.MinMaxScaler', 'MinMaxScaler', ([], {'feature_range': '(0, 1)', 'copy': '(True)'}), '(feature_range=(0, 1), ...
import numpy as np # Matrix for converting axial coordinates to pixel coordinates axial_to_pixel_mat = np.array([[np.sqrt(3), np.sqrt(3) / 2], [0, 3 / 2.]]) # Matrix for converting pixel coordinates to axial coordinates pixel_to_axial_mat = np.linalg.inv(axial_to_pixel_mat) # These are the vectors for moving from ...
[ "numpy.abs", "numpy.sqrt", "numpy.arange", "numpy.squeeze", "numpy.array", "numpy.zeros", "numpy.linalg.inv", "numpy.vstack", "numpy.round" ]
[((244, 277), 'numpy.linalg.inv', 'np.linalg.inv', (['axial_to_pixel_mat'], {}), '(axial_to_pixel_mat)\n', (257, 277), True, 'import numpy as np\n'), ((358, 378), 'numpy.array', 'np.array', (['(1, 0, -1)'], {}), '((1, 0, -1))\n', (366, 378), True, 'import numpy as np\n'), ((384, 404), 'numpy.array', 'np.array', (['(0, ...
import numpy as np import scipy from scipy.stats import binom # numpy.seterr(all='raise') # # Decision tree: Regression # class Tree(): def __init__(self, X, y, maxDepth, alpha0 = None, baseline_features = None, peek_ahead_max_depth=0, split_val_quantiles = [], peek_ahead_quantiles = [], nSamples = ...
[ "numpy.mean", "numpy.unique", "numpy.append", "numpy.nanmean", "numpy.quantile", "numpy.sum", "numpy.isnan", "numpy.array", "scipy.stats.binom.cdf", "numpy.min", "numpy.argmin", "numpy.isinf", "numpy.var", "numpy.random.permutation" ]
[((9593, 9611), 'numpy.nanmean', 'np.nanmean', (['self.y'], {}), '(self.y)\n', (9603, 9611), True, 'import numpy as np\n'), ((12297, 12325), 'numpy.isnan', 'np.isnan', (['best_split_feature'], {}), '(best_split_feature)\n', (12305, 12325), True, 'import numpy as np\n'), ((17461, 17483), 'numpy.isinf', 'np.isinf', (['be...
"""Test becquerel's Spectrum.""" import pytest import datetime import numpy as np from uncertainties import ufloat, UFloat, unumpy import becquerel as bq TEST_DATA_LENGTH = 256 TEST_COUNTS = 4 TEST_GAIN = 8.23 TEST_EDGES_KEV = np.arange(TEST_DATA_LENGTH + 1) * TEST_GAIN def make_data(lam=TEST_COUNTS, size=TEST_DAT...
[ "numpy.sqrt", "numpy.array", "becquerel.Spectrum.from_listmode", "pytest.fixture", "uncertainties.ufloat", "numpy.arange", "datetime.datetime", "numpy.random.poisson", "numpy.where", "becquerel.Calibration.from_linear", "numpy.logspace", "uncertainties.unumpy.uarray", "numpy.random.normal", ...
[((5201, 5276), 'pytest.mark.parametrize', 'pytest.mark.parametrize', (['"""spec_type"""', "['uncal', 'cal', 'uncal_long', 'cal']"], {}), "('spec_type', ['uncal', 'cal', 'uncal_long', 'cal'])\n", (5224, 5276), False, 'import pytest\n'), ((5819, 5859), 'numpy.random.normal', 'np.random.normal', (['MEAN', 'STDDEV', 'NSAM...
from __future__ import division, print_function, absolute_import """ Author: PinAxe Project: Convolutional Auto Encoder Example. A 7 layers auto-encoder with TensorFlow Convolutional layers trains on noised MNIST set. Supposed to do some serious denoising. Also it saves and automaticaly restores the model and does vis...
[ "numpy.clip", "tensorflow.image.resize_images", "tensorflow.examples.tutorials.mnist.input_data.read_data_sets", "tensorflow.reduce_mean", "matplotlib.pyplot.imshow", "tensorflow.pow", "tensorflow.placeholder", "tensorflow.Session", "tensorflow.layers.conv2d", "tensorflow.nn.sigmoid", "numpy.emp...
[((2607, 2660), 'tensorflow.examples.tutorials.mnist.input_data.read_data_sets', 'input_data.read_data_sets', (['"""/tmp/data/"""'], {'one_hot': '(True)'}), "('/tmp/data/', one_hot=True)\n", (2632, 2660), False, 'from tensorflow.examples.tutorials.mnist import input_data\n'), ((2661, 2685), 'tensorflow.reset_default_gr...
import matplotlib.pyplot as plt import numpy as np from sklearn.datasets import load_boston from sklearn.ensemble import StackingRegressor from sklearn.linear_model import LinearRegression, TheilSenRegressor from sklearn.metrics import mean_squared_error from sklearn.model_selection import train_test_split from sklearn...
[ "sklearn.utils.check_random_state", "numpy.median", "numpy.ones", "matplotlib.pyplot.ylabel", "sklearn.model_selection.train_test_split", "numpy.average", "matplotlib.pyplot.xlabel", "matplotlib.pyplot.plot", "sklearn.datasets.load_boston", "sklearn.linear_model.TheilSenRegressor", "sklearn.metr...
[((485, 517), 'sklearn.utils.check_random_state', 'check_random_state', (['random_state'], {}), '(random_state)\n', (503, 517), False, 'from sklearn.utils import check_random_state\n'), ((4933, 4978), 'matplotlib.pyplot.plot', 'plt.plot', (['p', 'ensemble_ols', '"""b"""'], {'label': '"""enols"""'}), "(p, ensemble_ols, ...
import openl3 from pathlib import Path import numpy as np import librosa import tensorflow_hub as hub class AudioL3: def __init__(self, input_repr: str = 'mel256', content_type: str = 'music', embedding_size: int = 512) -> None: self.model = openl3.models.load_audio_embedding_model(input_repr=input_repr...
[ "numpy.mean", "openl3.models.load_audio_embedding_model", "tensorflow_hub.load", "openl3.get_audio_embedding", "librosa.load" ]
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""" Author: <NAME> Source: Content: File includes calculation of values on cubic Bézier curve. """ import numpy as np # calculates one point on a cubic Bézier curve # input: - uVal (float): parameter of value u # - b (list) = [b0, b1, ..., bn] control and Bézier points as list # output: - poin...
[ "numpy.linspace" ]
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# -*- coding: utf-8 -*- """ Plotting planet population Joint PDF Written By: <NAME> 2/1/2019 """ try: import cPickle as pickle except: import pickle import os if not 'DISPLAY' in os.environ.keys(): #Check environment for keys import matplotlib matplotlib.use('Agg') import matplotlib.pyplot as plt ...
[ "matplotlib.ticker.LogLocator", "matplotlib.pyplot.ylabel", "numpy.nanmin", "os.path.exists", "re.split", "numpy.where", "matplotlib.pyplot.xlabel", "EXOSIMS.util.vprint.vprint", "numpy.asarray", "numpy.max", "matplotlib.pyplot.close", "numpy.linspace", "numpy.nanmax", "numpy.min", "os.e...
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# python3.7 """Implements image cropping.""" import numpy as np try: import nvidia.dali.fn as fn except ImportError: fn = None try: import cupy except ImportError: cupy = None from utils.formatting_utils import format_image_size from .base_transformation import BaseTransformation __all__ = ['Cente...
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import numpy as np import nept def bayesian_prob(counts, tuning_curves, binsize, min_neurons, min_spikes=1): """Computes the bayesian probability of location based on spike counts. Parameters ---------- counts : nept.AnalogSignal Where each inner array is the number of spikes (int) in each bi...
[ "numpy.nanargmax", "nept.Position", "numpy.where", "numpy.nansum", "numpy.log", "numpy.asarray", "nept.Epoch", "numpy.any", "numpy.sum", "numpy.empty", "numpy.isnan", "numpy.finfo", "numpy.shape", "numpy.isinf", "numpy.seterr", "numpy.arange" ]
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import numpy as np import torch import torch.nn as nn from torch.autograd import Variable import math import torch.nn.functional as F import pdb def Entropy(input_): bs = input_.size(0) epsilon = 1e-5 entropy = -input_ * torch.log(input_ + epsilon) entropy = torch.sum(entropy, dim=1) return entropy...
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import re import warnings from astropy.coordinates import SkyCoord import astropy.units as u import numpy as np from astropy.wcs import WCS, FITSFixedWarning from astropy.io import fits def _arange_inclusive(x0, x1, binx): """ Return np.arange(x0, x1, binx) except that range is inclusive of x1. """ ...
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import os import matplotlib.pyplot as plt import numpy as np from skimage.feature import plot_matches def show_correspondences(imgA, imgB, X1, Y1, X2, Y2, matches, good_matches, number_to_display, filename=None): """ Visualizes corresponding points between two images, either as arrows or dots mode='dots': Co...
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""" The purpose of this code is to first create the raw directory folder and include the following files starting protein receptor starting ligand target ligand glide pose viewer file Then the top glide poses are added Then the decoys are created It can be run on sherlock using $ $SCHRODINGER/run python3 decoy.py al...
[ "schrodinger.structure.StructureWriter", "numpy.arccos", "schrodinger.structutils.transform.get_centroid", "schrodinger.structutils.interactions.steric_clash.clash_volume", "numpy.sin", "os.path.exists", "os.listdir", "argparse.ArgumentParser", "schrodinger.structutils.transform.rotate_structure", ...
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# -*- coding:utf-8 -*- """ This file generates description of model and intermediate images of extracted features """ import keras import sys import json import numpy as np from PIL import Image import os base_path = os.path.dirname(os.path.abspath(__file__)) x_norm_file = sys.argv[1] x_test_file = sys.argv[2] y_tes...
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#=============================================================================== # Copyright 2022 Intel Corporation # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.a...
[ "numpy.dtype", "numpy.ones_like", "numpy.reshape", "numpy.unique", "numpy.any", "numpy.errstate", "numpy.zeros", "numpy.empty", "numpy.vstack", "numpy.all", "numpy.isinf", "numpy.arange" ]
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import numpy as np import pandas as pd from classy import Class import pickle import sys,os import astropy from astropy.cosmology import Planck15 from astropy import units as u import matplotlib.pyplot as plt from matplotlib import rc rc('font',**{'family':'sans-serif','sans-serif':['Helvetica']}) rc('text', usetex=Tr...
[ "numpy.log10", "scipy.signal.argrelextrema", "numpy.where", "scipy.integrate.simps", "scipy.interpolate.interp1d", "numpy.max", "matplotlib.rc", "numpy.min", "pandas.DataFrame", "scipy.special.jv", "numpy.logspace" ]
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import traceback import h5py import matplotlib.pyplot as plt import numpy as np import os import seaborn as sn import sys import tensorflow as tf from support.data_model import CLASSES, TAG_CLASS_MAP, Track, UNCLASSIFIED_TAGS from support.track_utils import convert_frames, convert_hdf5_frames START_TIME = '2021-03...
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# -------------- #Importing header files import pandas as pd import numpy as np import matplotlib.pyplot as plt #Path of the file path data = pd.read_csv(path) data = data.rename(columns={'Total':'Total_Medals'}) data.head() #Code starts here # -------------- #Code starts here data['Better_Event'] = n...
[ "pandas.read_csv", "matplotlib.pyplot.ylabel", "numpy.where", "matplotlib.pyplot.xticks", "matplotlib.pyplot.xlabel", "pandas.DataFrame", "matplotlib.pyplot.subplots", "matplotlib.pyplot.show" ]
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import matplotlib matplotlib.use('Agg') import os, sys import yaml from argparse import ArgumentParser from tqdm import tqdm import imageio import numpy as np from skimage.transform import resize from skimage import img_as_ubyte import torch from sync_batchnorm import DataParallelWithCallback # from modules.generato...
[ "sync_batchnorm.DataParallelWithCallback", "argparse.ArgumentParser", "imageio.imwrite", "matplotlib.use", "gzip.open", "torch.load", "animate.normalize_kp", "torch.device", "modules.keypoint_detector.KPDetector", "time.sleep", "yaml.load", "numpy.array", "copy.deepcopy", "torch.no_grad", ...
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#!/usr/bin/env python """ Plot a depth plane extracted from the SCEC Community Velocity Model. """ import math import numpy as np import matplotlib.pyplot as plt import cst.data import cst.cvms import cst.cvmh # parameters prop = 'rho' prop = 'Vs' label = 'S-wave velocity (m/s)' depth = 500.0 vmin, vmax = 300, 3200 de...
[ "matplotlib.pyplot.gca", "math.cos", "matplotlib.pyplot.figure", "numpy.empty_like", "numpy.meshgrid", "numpy.arange" ]
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# -*- coding: utf-8 -*- """ v9s model * Input: v5_im Author: Kohei <<EMAIL>> """ from logging import getLogger, Formatter, StreamHandler, INFO, FileHandler from pathlib import Path import subprocess import argparse import math import glob import sys import json import re import warnings import scipy import tqdm impo...
[ "logging.getLogger", "numpy.clip", "logging.StreamHandler", "keras.backend.sum", "pandas.read_csv", "tables.Atom.from_dtype", "math.floor", "keras.callbacks.History", "numpy.array", "tables.Filters", "pathlib.Path", "click.group", "subprocess.Popen", "keras.backend.clip", "json.dumps", ...
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from random import randint import numpy as np try: import tensorflow as tf except ImportError: tf = None # ToDo: we are using a lot of tf.keras.backend modules below, can we use tf core instead? class MaskingDense(tf.keras.layers.Layer): """ Just copied code from keras Dense layer and added masking and ...
[ "tensorflow.keras.constraints.get", "tensorflow.keras.backend.dropout", "tensorflow.keras.activations.get", "tensorflow.keras.backend.in_train_phase", "tensorflow.keras.backend.bias_add", "tensorflow.keras.layers.BatchNormalization", "tensorflow.keras.initializers.get", "tensorflow.keras.regularizers....
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#!/usr/bin/env python3 from argparse import ArgumentParser import matplotlib.pyplot as plt import numpy as np from matplotlib.colors import to_hex def main(args): cmap = plt.get_cmap(args.cmap) for x in np.linspace(0, 1, num=args.n_colors): print(to_hex(cmap(x), keep_alpha=False)) if __name__ == '...
[ "numpy.linspace", "argparse.ArgumentParser", "matplotlib.pyplot.get_cmap" ]
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import pandas as pd from matplotlib import pyplot from sklearn.externals import joblib import numpy as np import datetime import pickle import argparse def string_to_timestamp(string): date_time_obj = datetime.datetime.strptime(string, '%Y-%m-%d %H:%M:%S') timestamp = date_time_obj.timestamp() return times...
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