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import os import tempfile import numpy as np import pytest import calliope def verify_solution_integrity(model_solution, solution_from_disk, tempdir): # Check whether the two are the same np.allclose(model_solution['e_cap'], solution_from_disk['e_cap']) # Check that config AttrDict has been...
[ "tempfile.TemporaryDirectory", "calliope.read.read_netcdf", "numpy.allclose", "pytest.fixture", "calliope.read.read_csv", "calliope.Model", "os.path.join" ]
[((208, 273), 'numpy.allclose', 'np.allclose', (["model_solution['e_cap']", "solution_from_disk['e_cap']"], {}), "(model_solution['e_cap'], solution_from_disk['e_cap'])\n", (219, 273), True, 'import numpy as np\n'), ((435, 465), 'pytest.fixture', 'pytest.fixture', ([], {'scope': '"""module"""'}), "(scope='module')\n", ...
# coding=utf-8 # Copyright 2021 The Google Research Authors. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicab...
[ "numpy.shape", "numpy.random.randn" ]
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from matplotlib.finance import quotes_historical_yahoo import sys from datetime import date import matplotlib.pyplot as plt import numpy as np today = date.today() start = (today.year - 1, today.month, today.day) symbol = 'DISH' if len(sys.argv) == 2: symbol = sys.argv[1] quotes = quotes_historical_yahoo(symbol,...
[ "matplotlib.finance.quotes_historical_yahoo", "matplotlib.pyplot.show", "datetime.date.today", "matplotlib.pyplot.figure", "numpy.diff", "numpy.array" ]
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import numpy as np def test_rotation(): board_size = 3 states = np.array([[[[1, 2, 0], [2, 1, 0], [0, 1, 2]]], [[[0, 3, 4], [0, 0, 0], [2, 1, 0]]]]) visit_counts = np.array([[0, 0, 3,...
[ "numpy.fliplr", "numpy.rot90", "numpy.array", "numpy.flip" ]
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import numpy as np import jetyak import jviz import sensors import shapefile import matplotlib import matplotlib.pyplot as plt import pandas as pd import utm from mpl_toolkits.basemap import Basemap import mpl_toolkits.basemap as mb from scipy import stats def lat2str(deg): min = 60 * (deg - np.floor(deg)) deg...
[ "numpy.abs", "matplotlib.pyplot.show", "numpy.floor", "numpy.arange", "mpl_toolkits.basemap.Basemap" ]
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import torch import torch.utils.data as data from torchvision.datasets.folder import has_file_allowed_extension, is_image_file, IMG_EXTENSIONS, pil_loader, accimage_loader,default_loader from PIL import Image import sys import os import os.path import numpy as np from random import shuffle REGIONS_DICT={'Alabama':...
[ "os.path.expanduser", "torchvision.datasets.folder.has_file_allowed_extension", "os.path.isdir", "random.shuffle", "os.walk", "numpy.array", "os.path.join", "os.listdir", "os.scandir", "numpy.repeat" ]
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import random import numpy as np from bayesnet.network import Network def hmc(model, call_args, parameter=None, sample_size=100, step_size=1e-3, n_step=10): """ Hamiltonian Monte Carlo sampling aka Hybrid Monte Carlo sampling Parameters ---------- model : Network bayesian network call...
[ "random.random", "numpy.square", "numpy.exp", "numpy.random.normal" ]
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import collections import math import numbers import numpy as np from .. import base from .. import optim from .. import utils __all__ = [ 'LinearRegression', 'LogisticRegression' ] class GLM: """Generalized Linear Model. Parameters: optimizer (optim.Optimizer): The sequential optimizer u...
[ "collections.defaultdict", "numpy.argsort" ]
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from ROAR.agent_module.agent import Agent from ROAR.utilities_module.data_structures_models import SensorsData from ROAR.utilities_module.vehicle_models import Vehicle, VehicleControl from ROAR.configurations.configuration import Configuration as AgentConfig import cv2 import numpy as np import open3d as o3d from ROAR....
[ "ROAR.perception_module.ground_plane_detector.GroundPlaneDetector", "open3d.visualization.Visualizer", "ROAR.utilities_module.occupancy_map.OccupancyGridMap", "numpy.asarray", "open3d.geometry.PointCloud", "open3d.geometry.TriangleMesh.create_coordinate_frame", "ROAR.utilities_module.vehicle_models.Vehi...
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#!/usr/bin/env python3 """Scan serial ports for ping devices Symlinks to detected devices are created under /dev/serial/ping/ This script needs root permission to create the symlinks """ import subprocess import numpy as np import rospy from brping import PingDevice, PingParser, PingMessage from brping.defini...
[ "serial.Serial", "brping.PingParser", "rospy.Time.now", "brping.PingDevice", "numpy.frombuffer", "subprocess.check_output", "socket.socket", "sensor_msgs.msg.MultiEchoLaserScan", "rospy.Publisher", "rospy.Rate", "rospy.loginfo", "sensor_msgs.msg.Range", "rospy.is_shutdown", "brping.PingMes...
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# BSD 3-Clause License # Copyright (c) 2020, Instit<NAME> # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # 1. Redistributions of source code must retain the above copyright notice, this # lis...
[ "numpy.isin", "scipy.sparse.find", "numpy.logical_not", "numpy.zeros", "networkx.topological_sort", "networkx.selfloop_edges", "numpy.cumsum", "scipy.sparse.csc_matrix", "numpy.where", "numpy.array", "scipy.sparse.csgraph.connected_components", "networkx.strongly_connected_components", "netw...
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# -*- coding: utf-8 -*- """ Created on Sun Dec 27 22:04:58 2020 @author: zhangjun """ # -*- coding: utf-8 -*- """ Created on Sun Dec 27 20:06:37 2020 @author: zhangjun """ import numpy as np class perceptron: def __init__(self): self.alpha = None self.b = None self.w...
[ "numpy.zeros", "numpy.dot", "numpy.array", "numpy.sum" ]
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import numpy as np import pylab as pl from sklearn import mixture np.random.seed(0) #C1 = np.array([[3, -2.7], [1.5, 2.7]]) #C2 = np.array([[1, 2.0], [-1.5, 1.7]]) # #X_train = np.r_[ # np.random.multivariate_normal((-7, -7), C1, size=7), # np.random.multivariate_normal((7, 7), C2, size=7), #] X_train = np.r_[ ...
[ "pylab.contour", "pylab.show", "numpy.random.seed", "sklearn.mixture.GaussianMixture", "pylab.scatter", "numpy.array", "numpy.column_stack" ]
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import numpy as np import pandas as pd from scipy.optimize import curve_fit from .helper import exp_fit_func, inverse_exp_func, exp_func def exp_curve_fit_(x_range, ln_y_range): popc, pcov = curve_fit(exp_fit_func, x_range, ln_y_range) ln_a, b = popc a = np.exp(ln_a) return a, b def get_interm_zip_f...
[ "numpy.sum", "numpy.log", "scipy.optimize.curve_fit", "numpy.min", "numpy.exp", "numpy.log10" ]
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import numpy as np from scipy.spatial import cKDTree from scipy.spatial.distance import pdist, squareform from scipy.sparse import coo_matrix import pylab as plt def squared_exponential(x2,D=3): #x = np.reshape(x,(-1,D)) return np.exp(-x2/2.) def matern52(x2): x = np.sqrt(x2) res = x2 res *= 5./3....
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# Translation in python of the Matlab implementation of <NAME> and # <NAME>, of the algorithm described in # "Mixtures of Probabilistic Principal Component Analysers", # <NAME> and <NAME>, Neural Computation 11(2), # pp 443–482, MIT Press, 1999 import numpy as np def initialization_kmeans(X, p, q, variance_level=No...
[ "numpy.log", "numpy.eye", "numpy.random.randn", "numpy.power", "numpy.zeros", "numpy.argmin", "numpy.random.randint", "numpy.linalg.inv", "numpy.exp", "numpy.dot", "numpy.unique" ]
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import os import numpy as np folder = "" file_path = os.path.dirname(os.path.dirname(os.path.abspath(__file__))) os.chdir(file_path) map_files = { "main": "main.csv", "landmass": "landmass.csv" } save_file = "map_saves" def save(maps): for map_name in maps: np.savetxt(save_file...
[ "numpy.loadtxt", "os.path.abspath", "numpy.savetxt", "os.chdir" ]
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from fromTxtToVec.corpus_build import Corpus from fromTxtToVec.pad import Pad from fromTxtToVec.BERT_feat import ExtractBertEmb from fromTxtToVec.train_vector import Embedding import numpy as np class To_vec: def __init__(self, mode, sent_maxlen): self.mode = mode self.sent_maxlen = ...
[ "fromTxtToVec.BERT_feat.ExtractBertEmb", "numpy.array", "fromTxtToVec.corpus_build.Corpus", "fromTxtToVec.train_vector.Embedding", "fromTxtToVec.pad.Pad" ]
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""" Import needed modules """ "-----------------------------------------------------------------------------" from scipy.integrate import solve_ivp from Shared_Funcs.pemfc_transport_funcs import * import cantera as ct import numpy as np import sys """ Control options for derivative functions """ "---------------------...
[ "numpy.zeros_like", "numpy.sum", "numpy.zeros", "numpy.hstack", "numpy.append" ]
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from proteus import Domain, Context from proteus.mprans import SpatialTools as st from proteus import Gauges as ga from proteus import WaveTools as wt from math import * import numpy as np from proteus.mprans import BodyDynamics as bd opts=Context.Options([ # predefined test cases ("water_level", 0.325, "Heig...
[ "proteus.mprans.BodyDynamics.CaissonBody", "proteus.Domain.PlanarStraightLineGraphDomain", "proteus.Gauges.PointGauges", "proteus.mprans.SpatialTools.assembleDomain", "proteus.mprans.SpatialTools.CustomShape", "numpy.array", "numpy.linspace", "proteus.mprans.SpatialTools.Rectangle", "proteus.Context...
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""" Helper functions for calculating MMD and performing MMD test This module contains original code from: https://github.com/fengliu90/DK-for-TST MIT License Copyright (c) 2021 <NAME> Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentati...
[ "numpy.ceil", "numpy.ix_", "numpy.zeros", "torch.cat", "torch.diag", "torch.exp", "numpy.sort", "numpy.random.choice", "torch.sum", "torch.transpose" ]
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import numpy as np from blind_walking.envs.env_modifiers.env_modifier import EnvModifier from blind_walking.envs.env_modifiers.heightfield import HeightField from blind_walking.envs.env_modifiers.stairs import Stairs, boxHalfLength, boxHalfWidth """ Train robot to walk up stairs curriculum. Equal chances for t...
[ "numpy.random.uniform", "numpy.arange", "numpy.random.choice", "blind_walking.envs.env_modifiers.stairs.Stairs", "blind_walking.envs.env_modifiers.heightfield.HeightField" ]
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# 2-electron VMC code for 2dim quantum dot with importance sampling # Using gaussian rng for new positions and Metropolis- Hastings # Added energy minimization from math import exp, sqrt from random import random, seed, normalvariate import numpy as np import matplotlib.pyplot as plt from mpl_toolkits.mplot3d import A...
[ "scipy.optimize.minimize", "math.exp", "math.sqrt", "random.normalvariate", "numpy.zeros", "random.random", "numpy.array", "random.seed" ]
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import numpy as np import pandas as pd import tensorflow as tf from sklearn.metrics import average_precision_score as auprc from tensorflow.keras.models import Model from tensorflow.keras.layers import Dense, concatenate, Input, LSTM from tensorflow.keras.layers import Conv1D, Reshape, Lambda from tensorflow.keras.opt...
[ "pandas.DataFrame", "tensorflow.keras.layers.Dense", "tensorflow.keras.layers.Conv1D", "numpy.savetxt", "tensorflow.keras.optimizers.SGD", "tensorflow.keras.callbacks.ModelCheckpoint", "tensorflow.keras.models.Model", "iterutils.train_generator", "tensorflow.keras.layers.concatenate", "tensorflow....
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import os import numpy as np from netCDF4 import Dataset from compliance_checker.ioos import ( IOOS0_1Check, IOOS1_1Check, IOOS1_2_PlatformIDValidator, IOOS1_2Check, NamingAuthorityValidator, ) from compliance_checker.tests import BaseTestCase from compliance_checker.tests.helpers import MockTime...
[ "netCDF4.Dataset", "compliance_checker.ioos.IOOS1_1Check", "compliance_checker.tests.test_cf.get_results", "compliance_checker.ioos.IOOS0_1Check", "compliance_checker.ioos.IOOS1_2_PlatformIDValidator", "compliance_checker.ioos.IOOS1_2Check", "compliance_checker.ioos.NamingAuthorityValidator", "numpy.a...
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import multiprocessing as mp from multiprocessing.sharedctypes import RawArray from ctypes import c_bool, c_double import numpy as np import pandas as pd def standardize(X): """ Standardize each row in X to mean = 0 and SD = 1. """ X_m = np.ma.masked_invalid(X) return ((X.T - X_m.mean(axis=1)) / X_...
[ "numpy.frombuffer", "multiprocessing.sharedctypes.RawArray", "numpy.ma.masked_invalid", "numpy.isnan", "multiprocessing.Pool" ]
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from __future__ import print_function import torch, PIL.Image, cv2, pickle, sys, argparse import numpy as np import openmesh as om from tqdm import trange sys.path.append("../src/") from network import shading_net import renderer as rd from utility import subdiv_mesh_x4 from utility import CamPara from utility import m...
[ "numpy.absolute", "network.shading_net", "argparse.ArgumentParser", "pickle.load", "utility.subdiv_mesh_x4", "torch.device", "sys.path.append", "numpy.pad", "torch.load", "utility.flatten_naval", "utility.smpl_detoe", "numpy.max", "utility.make_trimesh", "numpy.rollaxis", "cv2.resize", ...
[((155, 181), 'sys.path.append', 'sys.path.append', (['"""../src/"""'], {}), "('../src/')\n", (170, 181), False, 'import torch, PIL.Image, cv2, pickle, sys, argparse\n'), ((463, 488), 'argparse.ArgumentParser', 'argparse.ArgumentParser', ([], {}), '()\n', (486, 488), False, 'import torch, PIL.Image, cv2, pickle, sys, a...
import ovito print("Hello, this is OVITO %i.%i.%i" % ovito.version) # Import OVITO modules. from ovito.io import * from ovito.modifiers import * from ovito.data import * from collections import Counter # Import standard Python and NumPy modules. import sys import numpy import os from ovito.pipeline import StaticSourc...
[ "matplotlib.pyplot.title", "matplotlib.pyplot.tight_layout", "numpy.set_printoptions", "matplotlib.pyplot.show", "ovito.pipeline.StaticSource", "matplotlib.pyplot.imshow", "sklearn.metrics.accuracy_score", "matplotlib.pyplot.yticks", "matplotlib.pyplot.ylabel", "collections.Counter", "matplotlib...
[((4035, 4120), 'os.path.join', 'os.path.join', (['ase_db_dataset_dir', "('hcp-sc-fcc-diam-bcc_displacement-30%' + '.db')"], {}), "(ase_db_dataset_dir, 'hcp-sc-fcc-diam-bcc_displacement-30%' + '.db'\n )\n", (4047, 4120), False, 'import os\n'), ((7813, 7845), 'sklearn.metrics.confusion_matrix', 'confusion_matrix', ([...
import subprocess as sbp import sys import os import numpy as np import numpy.linalg as la import pandas as pd import time import math from ast import literal_eval from pdb import set_trace as pst ''' decfreq01: The original opitimization with negative freq as first one. decfreq02: Move the atoms to direction of negat...
[ "numpy.zeros", "time.time", "numpy.linalg.eigh", "numpy.array", "numpy.linspace", "os.listdir", "sys.exit" ]
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# coding=utf-8 # Copyright 2021 The Google Research Authors. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicab...
[ "tf_agents.specs.array_spec.BoundedArraySpec", "pickle.dump", "numpy.sum", "numpy.amin", "numpy.maximum", "absl.logging.info", "tensorflow.compat.v1.Summary.Value", "numpy.histogram", "numpy.mean", "tensorflow.compat.v1.gfile.Exists", "numpy.linalg.norm", "os.path.join", "tensorflow.compat.v...
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import os import numpy as np from keras.models import Sequential, Model from keras.layers import Dense, Dropout, LSTM, TimeDistributed, Activation, Reshape, concatenate, Input from keras.optimizers import Adam from keras.callbacks import ModelCheckpoint, CSVLogger, Callback START_CHAR = '\b' END_CHAR = '\t' PADDING_C...
[ "os.remove", "numpy.sum", "numpy.argmax", "numpy.random.multinomial", "keras.models.Model", "os.path.isfile", "numpy.exp", "keras.layers.Input", "keras.layers.concatenate", "keras.callbacks.ModelCheckpoint", "keras.layers.Dropout", "numpy.asarray", "keras.optimizers.Adam", "numpy.log", "...
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# Copyright 2020 IBM Corporation # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, ...
[ "pandas.DataFrame", "matplotlib.pyplot.tight_layout", "numpy.stack", "argparse.ArgumentParser", "os.path.join", "sklearn.model_selection.train_test_split", "sklearn.metrics.r2_score", "os.environ.get", "pandas.read_parquet", "pandas.Series", "xgboost.XGBRegressor", "matplotlib.pyplot.ylabel", ...
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from brewgorithm import beer2vec, beer_emb, word_weighter import numpy as np import unittest from sklearn.metrics.pairwise import cosine_similarity class TestBeer2vec(unittest.TestCase): def test_most_similar_test(self): beers = beer2vec.get_beer2vec() embeddings = beer_emb.embed_doc("apricot peach fruity"...
[ "unittest.main", "sklearn.metrics.pairwise.cosine_similarity", "numpy.average", "brewgorithm.beer_emb.embed_doc", "brewgorithm.beer2vec.get_beer2vec", "brewgorithm.beer_emb.most_similar" ]
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import numpy as np import pandas as pd import statsmodels.api as sm from sklearn.preprocessing import OneHotEncoder import statistics import math import sys import itertools import time np.seterr(over='raise', under="ignore") def batch_pp(df, covariates, batch_column, ignore): """This function takes in a df, the ...
[ "pandas.DataFrame", "statsmodels.api.OLS", "numpy.seterr", "pandas.get_dummies", "statistics.stdev", "time.time", "pandas.concat" ]
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from google.protobuf.symbol_database import Default import nltk import random import pickle from nltk.corpus.reader.chasen import test from pandas.core.indexes import period from statsmodels.tsa.seasonal import _extrapolate_trend nltk.download('punkt') nltk.download('wordnet') from nltk.stem import WordNetLemm...
[ "keras.models.load_model", "streamlit.balloons", "streamlit.selectbox", "csv.reader", "statsmodels.tsa.arima_model.ARIMA", "streamlit.sidebar.write", "pandas.read_csv", "streamlit.radio", "streamlit.title", "streamlit.sidebar.title", "streamlit.sidebar.selectbox", "nltk.download", "streamlit...
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import spacy import sys import numpy as np import operator from keras.models import load_model from keras.preprocessing.text import Tokenizer from keras.preprocessing.sequence import pad_sequences import preprocess_data MAX_SEQUENCE_LENGTH = 100 EMBEDDING_DIM = 300 model = load_model('models/bidirectional_lstm/mod...
[ "keras.models.load_model", "numpy.ndenumerate", "numpy.zeros", "spacy.load", "operator.itemgetter", "preprocess_data.load_intents" ]
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import numpy as np def train_test( X: np.ndarray, y: np.ndarray, test_size: float, random_seed: int = 0, ) -> tuple[np.ndarray, np.ndarray, np.ndarray, np.ndarray]: """ Split input data randomly after shuffling Args: X (np.ndarray): decision matrix y (np.ndarray): ground-t...
[ "numpy.random.seed", "numpy.arange", "numpy.concatenate" ]
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import numpy as np import pandas as pd from tqdm import tqdm def map_prediction_to_emergence_label(results, training_values, test_values, predictors_to_run, test_terms, emergence_linear_thresholds=( ('rapidly emergent', 0.1), ...
[ "pandas.DataFrame", "tqdm.tqdm", "numpy.polyfit" ]
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# Licensed under a 3-clause BSD style license - see LICENSE.rst """ Data Series Sonification ======================== Functionality for sonifying data series. """ import warnings from inspect import signature, Parameter import numpy as np from astropy.table import Table, MaskedColumn from astropy.time import Time ...
[ "numpy.isnan", "pyo.Server", "numpy.diff", "inspect.signature", "warnings.warn", "numpy.repeat" ]
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import pickle import numpy as np import pandas as pd from keras.utils import np_utils from keras.utils.vis_utils import plot_model from keras.models import Sequential from keras.preprocessing.sequence import pad_sequences from keras.layers import LSTM, Dense, Embedding, Dropout from sklearn.model_selection import train...
[ "pickle.dump", "numpy.argmax", "pandas.read_csv", "keras.preprocessing.sequence.pad_sequences", "sklearn.model_selection.train_test_split", "keras.utils.vis_utils.plot_model", "sklearn.metrics.accuracy_score", "keras.layers.LSTM", "keras.layers.Dropout", "time.time", "keras.utils.np_utils.to_cat...
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# Python Standard Libraries import warnings import time import os import sys from pathlib import Path # Third party imports # fancy prints import numpy as np from tqdm import tqdm # grAdapt package import grAdapt.utils.math import grAdapt.utils.misc import grAdapt.utils.sampling from grAdapt import surrogate as sur, ...
[ "numpy.random.seed", "grAdapt.sampling.equidistributed.MaximalMinDistance", "grAdapt.surrogate.GPRSlidingWindow", "grAdapt.optimizer.AMSGradBisection", "numpy.array", "numpy.linalg.norm", "warnings.warn", "grAdapt.escape.NormalDistributionDecay" ]
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#!/usr/bin/python3 """modelling.py Various utility functions for modelling """ __author__ = "<NAME>" import os import numpy as np import tensorflow as tf from tensorflow.keras.callbacks import Callback from tensorflow.keras.models import Model from tensorflow.keras.layers import Activation, BatchNormalization, \...
[ "tensorflow.keras.layers.Dense", "tensorflow.keras.layers.concatenate", "tensorflow.keras.layers.Masking", "os.path.join", "tensorflow.keras.losses.SparseCategoricalCrossentropy", "tensorflow.keras.layers.BatchNormalization", "nicu_los.src.utils.custom_keras_layers.ApplyMask", "tensorflow.keras.losses...
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from vmad.lib import linalg, mpi from vmad.testing import BaseScalarTest from mpi4py import MPI import numpy from pprint import pprint class Test_allreduce(BaseScalarTest): to_scalar = staticmethod(linalg.to_scalar) comm = MPI.COMM_WORLD x = comm.rank + 1.0 y = comm.allreduce(x) ** 2 x_ = numpy...
[ "vmad.lib.mpi.allreduce", "numpy.eye", "vmad.lib.mpi.allbcast", "numpy.sum" ]
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import torch.nn as nn import numpy as np import torch class DQN(nn.Module): ''' pytorch CNN model for Atari games ''' def __init__(self,img_shape,num_actions): super(DQN,self).__init__() self._conv=nn.Sequential( nn.Conv2d(4,16,kernel_size=5,stride=2), nn.BatchNor...
[ "torch.nn.ReLU", "torch.nn.Conv2d", "numpy.zeros", "torch.nn.BatchNorm2d", "numpy.random.random", "numpy.random.randint", "torch.nn.Linear", "torch.no_grad" ]
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# coding:utf-8 from load_data import load_data, timer from sklearn.linear_model import LogisticRegression from sklearn.naive_bayes import GaussianNB from sklearn.svm import SVC from sklearn.model_selection import StratifiedShuffleSplit from sklearn.model_selection import GridSearchCV import numpy as np import pandas a...
[ "sklearn.naive_bayes.GaussianNB", "numpy.logspace", "load_data.load_data", "sklearn.linear_model.LogisticRegression", "sklearn.svm.SVC" ]
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# Copyright 2018 The TensorFlow Authors All Rights Reserved. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicab...
[ "tensorflow.nn.softmax", "tensorflow.nn.relu", "research.cvt_text.corpus_processing.minibatching.build_array", "tensorflow.argmax", "tensorflow.layers.dense", "tensorflow.variable_scope", "tensorflow.placeholder", "research.cvt_text.model.model_helpers.project", "research.cvt_text.model.model_helper...
[((1326, 1400), 'tensorflow.placeholder', 'tf.placeholder', (['tf.float32', '[None, None, None]'], {'name': "(task_name + '_labels')"}), "(tf.float32, [None, None, None], name=task_name + '_labels')\n", (1340, 1400), True, 'import tensorflow as tf\n'), ((2901, 2930), 'tensorflow.nn.softmax', 'tf.nn.softmax', (['primary...
# A simple MDP where agent has to traverse a specific path # in gridworld - wrong action will throw player back to start or do nothing. # Player is rewarded for reaching new maximum length in the episode. # # State is represented by a positive ndim vector that tells # where the player is. This is designed to mimic coor...
[ "numpy.floor", "gym.spaces.Discrete", "numpy.zeros", "numpy.random.default_rng", "random.random", "gym.spaces.Box" ]
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# coding: utf-8 import numpy as np import matplotlib.pyplot as plt class Naca_4_digit(object): def __init__(self, int_4, attack_angle_deg, resolution, quasi_equidistant=True, length_adjust=False, from5digit=False): if from5digit == False: self.m = float(int_4[0]) / 100 # maximum camber ...
[ "numpy.full", "matplotlib.pyplot.xlim", "matplotlib.pyplot.show", "numpy.abs", "matplotlib.pyplot.plot", "matplotlib.pyplot.ylim", "numpy.zeros", "numpy.min", "numpy.max", "numpy.array", "numpy.sin", "numpy.linspace", "numpy.cos", "numpy.arctan", "numpy.sqrt" ]
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""" Copyright (c) Facebook, Inc. and its affiliates. This source code is licensed under the MIT license found in the LICENSE file in the root directory of this source tree. """ from argparse import ArgumentParser from collections import defaultdict from typing import Optional import fastmri import numpy as np import...
[ "fastmri.data.transforms.center_crop_to_smallest", "numpy.zeros_like", "torch.optim.lr_scheduler.StepLR", "argparse.ArgumentParser", "fastmri.ifft2c", "torch.cat", "collections.defaultdict", "fastmri.data.transforms.center_crop", "fastmri.pl_modules.mri_module.MriModule.add_model_specific_args", "...
[((2896, 2982), 'fastmri.models.adaptive_varnet.AdaptiveSensitivityModel', 'AdaptiveSensitivityModel', (['sens_chans', 'sens_pools'], {'num_sense_lines': 'num_sense_lines'}), '(sens_chans, sens_pools, num_sense_lines=\n num_sense_lines)\n', (2920, 2982), False, 'from fastmri.models.adaptive_varnet import AdaptiveSen...
#!/usr/bin/env python3 # -*- coding: utf-8 -*- """ loading_dataset.py Created on Thu May 3 12:47:36 2018 @author: sungkyun """ import torch from torch.utils.data.dataset import Dataset #from torch import from_numpy import numpy as np import pandas as pd #from sklearn import preprocessing #from sklearn.preprocessing i...
[ "numpy.pad", "numpy.random.uniform", "numpy.load", "nnmnkwii.minmax_scale", "torch.LongTensor", "pandas.read_csv", "numpy.transpose", "numpy.hstack", "numpy.arange", "glob.glob" ]
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import numpy as np import torch import torch.nn as nn import torch.nn.functional as F from torch.autograd import Variable from rlkit.torch.core import PyTorchModule from rlkit.torch.networks import Mlp from rlkit.torch import pytorch_util as ptu from rlkit.torch.torch_meta_irl_algorithm import np_to_pytorch_batch fr...
[ "torch.mean", "torch.nn.ReLU", "torch.nn.Sequential", "torch.nn.BatchNorm1d", "rlkit.torch.pytorch_util.from_numpy", "rlkit.torch.distributions.ReparamMultivariateNormalDiag", "numpy.array", "torch.nn.Linear", "torch.sum", "numpy.concatenate" ]
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""" Module for Magellan/FIRE specific methods. Important Notes: - If you are reducing old FIRE data (before the broken happened in 2016), please change the ord_spat_pos array (see lines from ~220 to ~230) .. include:: ../include/links.rst """ from pkg_resources import resource_filename import numpy ...
[ "numpy.full", "numpy.atleast_1d", "numpy.log", "pypeit.telescopes.MagellanTelescopePar", "numpy.asarray", "pypeit.core.framematch.check_frame_exptime", "pkg_resources.resource_filename", "numpy.array", "numpy.arange", "numpy.log10", "pypeit.images.detector_container.DetectorContainer", "numpy....
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#%% import numpy as np import scipy.signal as signal import matplotlib.pyplot as plt #%% N = 1000 n = np.arange (N) f = 100 fs = 44100 x = (1.58 * 0.3125) * np.sin (2 * np.pi * n * f / fs) #%% e_s_plus = 72 e_s_minus = -72 V_cm = (e_s_plus + e_s_minus) / 2 V_dm = (e_s_plus - e_s_minus) / 2 R_p = 0 # 50000 G = (R_p +...
[ "matplotlib.pyplot.axhline", "matplotlib.pyplot.plot", "numpy.zeros", "matplotlib.pyplot.figure", "numpy.sin", "numpy.arange" ]
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# Copyright (C) 2018-2019 <NAME> # SPDX-License-Identifier: Apache-2.0 import numpy def read_surfaces(res): inp = res.input res.surfaces = {} if 'probes' not in inp: return for probe in inp['probes']: if not (probe.get('enabled', True) and probe.get('type', '') == 'IsoSurface'): ...
[ "numpy.array" ]
[((2334, 2356), 'numpy.array', 'numpy.array', (['timesteps'], {}), '(timesteps)\n', (2345, 2356), False, 'import numpy\n')]
import os import pickle import numpy as np def deviation_from_actual_value(array): """ Calculates standard deviation for the parameters :param array: either (num_iters, num_points_in_sim, [n] params) or (num_iters, num_points_in_sim, [n*m] params) :return: """ if array.ndim == 3: devia...
[ "pickle.dump", "numpy.std", "os.getcwd", "numpy.zeros", "pickle.load" ]
[((328, 370), 'numpy.zeros', 'np.zeros', (['(array.shape[1], array.shape[2])'], {}), '((array.shape[1], array.shape[2]))\n', (336, 370), True, 'import numpy as np\n'), ((1451, 1465), 'pickle.load', 'pickle.load', (['f'], {}), '(f)\n', (1462, 1465), False, 'import pickle\n'), ((1543, 1557), 'pickle.load', 'pickle.load',...
import seaborn as sns import matplotlib.pyplot as plt import numpy as np def plot(gather_count, filename): gather_count = np.log(gather_count + 1) sns.color_palette("light:b", as_cmap=True) ax = sns.heatmap(gather_count, vmax=8, vmin=0, cmap="Purples", xticklabels=False, yticklabels=F...
[ "seaborn.heatmap", "numpy.log", "numpy.array", "seaborn.color_palette", "matplotlib.pyplot.tight_layout", "matplotlib.pyplot.savefig" ]
[((128, 152), 'numpy.log', 'np.log', (['(gather_count + 1)'], {}), '(gather_count + 1)\n', (134, 152), True, 'import numpy as np\n'), ((157, 199), 'seaborn.color_palette', 'sns.color_palette', (['"""light:b"""'], {'as_cmap': '(True)'}), "('light:b', as_cmap=True)\n", (174, 199), True, 'import seaborn as sns\n'), ((209,...
import random import math import numpy from planner.state_space import test_goal, test_parent_operator, StateSpace, Solution, Plan from misc.numerical import INF from misc.functions import randomize def random_policy(current_vertex): edges = current_vertex.get_successors() if not edges: return None # ...
[ "planner.state_space.Plan", "numpy.average", "math.sqrt", "planner.state_space.StateSpace", "random.choice", "planner.state_space.test_goal", "planner.state_space.Solution", "misc.functions.randomize" ]
[((346, 366), 'random.choice', 'random.choice', (['edges'], {}), '(edges)\n', (359, 366), False, 'import random\n'), ((876, 934), 'planner.state_space.StateSpace', 'StateSpace', (['generator', 'start'], {'max_extensions': 'INF'}), '(generator, start, max_extensions=INF, **kwargs)\n', (886, 934), False, 'from planner.st...
import numpy as np import math from scipy.interpolate import interp1d import scipy.linalg as LA import os import numpy as np from skimage.transform import resize from multiprocessing import Process import shutil from tqdm import tqdm from concurrent.futures import ProcessPoolExecutor, as_completed def compute_tf_fi...
[ "os.mkdir", "numpy.abs", "concurrent.futures.ProcessPoolExecutor", "skimage.transform.resize", "shutil.rmtree", "numpy.zeros_like", "numpy.fft.fft", "numpy.power", "os.path.exists", "numpy.linspace", "numpy.fft.ifft", "tqdm.tqdm", "numpy.ceil", "numpy.min", "concurrent.futures.as_complet...
[((604, 652), 'numpy.linspace', 'np.linspace', (['(0)', '(2 * np.pi)', 's_Len'], {'endpoint': '(False)'}), '(0, 2 * np.pi, s_Len, endpoint=False)\n', (615, 652), True, 'import numpy as np\n'), ((743, 798), 'numpy.linspace', 'np.linspace', (['ps_MinFreqHz', 'ps_MaxFreqHz'], {'num': 'ps_FreqSeg'}), '(ps_MinFreqHz, ps_Max...
from __future__ import absolute_import from __future__ import print_function import os,time,cv2,sys,math import tensorflow as tf import numpy as np import time, datetime import argparse import random import os, sys import subprocess from utils import utils, helpers from builders import fusion_model_builde...
[ "argparse.ArgumentParser", "tensorflow.trainable_variables", "tensorflow.train.AdamOptimizer", "tensorflow.ConfigProto", "numpy.around", "utils.utils.prepare_data_multiexposure", "numpy.mean", "tensorflow.summary.merge", "utils.utils.count_params", "os.path.join", "argparse.ArgumentTypeError", ...
[((1599, 1624), 'argparse.ArgumentParser', 'argparse.ArgumentParser', ([], {}), '()\n', (1622, 1624), False, 'import argparse\n'), ((4663, 4679), 'tensorflow.ConfigProto', 'tf.ConfigProto', ([], {}), '()\n', (4677, 4679), True, 'import tensorflow as tf\n'), ((4770, 4795), 'tensorflow.Session', 'tf.Session', ([], {'conf...
# -*- coding: utf-8 -*- """ Created on Sun Jul 15 22:20:52 2018 @author: Srinivas """ import numpy as np X = np.arange(1, 1000) Y = X[(X % 3 == 0) | (X % 5 == 0)] Z = sum(Y) print(Z)
[ "numpy.arange" ]
[((121, 139), 'numpy.arange', 'np.arange', (['(1)', '(1000)'], {}), '(1, 1000)\n', (130, 139), True, 'import numpy as np\n')]
#!/usr/bin/env python3 # -*- coding: utf-8 -*- """ @author: <NAME> email: <EMAIL> GitHub: phuycke """ #%% import matplotlib.pyplot as plt import mne import numpy as np import os import pandas as pd import seaborn as sns from scipy import ndimage from matplotlib import ticker...
[ "numpy.sum", "seaborn.regplot", "matplotlib.pyplot.figure", "numpy.mean", "numpy.arange", "os.path.join", "numpy.nanmean", "matplotlib.ticker.ScalarFormatter", "numpy.meshgrid", "numpy.zeros_like", "matplotlib.pyplot.close", "numpy.max", "numpy.log10", "seaborn.set_context", "seaborn.set...
[((607, 634), 'matplotlib.pyplot.figure', 'plt.figure', ([], {'figsize': '(10, 9)'}), '(figsize=(10, 9))\n', (617, 634), True, 'import matplotlib.pyplot as plt\n'), ((642, 666), 'matplotlib.gridspec.GridSpec', 'gridspec.GridSpec', (['(2)', '(13)'], {}), '(2, 13)\n', (659, 666), False, 'from matplotlib import ticker, rc...
""" 日期修改 """ import os import cv2 import numpy as np import matplotlib.pyplot as plt np.set_printoptions(threshold=np.inf) root_dir = '/media/xiayule/bdcp/other' def modify_date(): img_path = os.path.join(root_dir, '3.jpg') img = cv2.imread(img_path) # _, img1 = cv2.threshold(img, 150, 200, cv2.THRESH_BI...
[ "numpy.set_printoptions", "matplotlib.pyplot.show", "matplotlib.pyplot.plot", "cv2.cvtColor", "cv2.waitKey", "cv2.destroyAllWindows", "numpy.zeros", "numpy.ones", "cv2.imread", "cv2.inRange", "numpy.array", "numpy.exp", "numpy.linspace", "cv2.imshow", "os.path.join", "cv2.namedWindow" ...
[((85, 122), 'numpy.set_printoptions', 'np.set_printoptions', ([], {'threshold': 'np.inf'}), '(threshold=np.inf)\n', (104, 122), True, 'import numpy as np\n'), ((199, 230), 'os.path.join', 'os.path.join', (['root_dir', '"""3.jpg"""'], {}), "(root_dir, '3.jpg')\n", (211, 230), False, 'import os\n'), ((241, 261), 'cv2.im...
from cosymlib.shape import maps import numpy as np import sys def plot_minimum_distortion_path_shape(shape_label1, shape_label2, num_points=20, output=sys.stdout, show_plot=True): import matplotlib.pyplot as plt path = get_shape_path(shape_label1, shape_label2, num_points) shape_map_txt = " {:6} {:6}\n"...
[ "cosymlib.shape.maps.get_shape_map", "matplotlib.pyplot.show", "matplotlib.pyplot.plot", "numpy.argmax", "matplotlib.pyplot.axes", "matplotlib.pyplot.scatter", "matplotlib.pyplot.text", "numpy.array", "matplotlib.pyplot.ylabel", "matplotlib.pyplot.xlabel" ]
[((764, 822), 'cosymlib.shape.maps.get_shape_map', 'maps.get_shape_map', (['shape_label1', 'shape_label2', 'num_points'], {}), '(shape_label1, shape_label2, num_points)\n', (782, 822), False, 'from cosymlib.shape import maps\n'), ((1337, 1347), 'matplotlib.pyplot.axes', 'plt.axes', ([], {}), '()\n', (1345, 1347), True,...
#!/usr/bin/env python3 # -*- coding: utf-8 -*- """ Created on Wed Jun 13 17:38:37 2018 @author: simao """ import numpy as np from scipy import stats def onehotencoder(tind, *args): if len(args) == 0: maxclasses = max(tind)+1 elif len(args) == 1: maxclasses = args[0] else: raise Not...
[ "numpy.random.uniform", "scipy.stats.mode", "numpy.argmax", "numpy.zeros", "numpy.arange" ]
[((346, 383), 'numpy.zeros', 'np.zeros', (['(tind.shape[0], maxclasses)'], {}), '((tind.shape[0], maxclasses))\n', (354, 383), True, 'import numpy as np\n'), ((555, 592), 'numpy.zeros', 'np.zeros', (['(tind.shape[0], maxclasses)'], {}), '((tind.shape[0], maxclasses))\n', (563, 592), True, 'import numpy as np\n'), ((763...
import numpy as np import matplotlib.pyplot as plt from matplotlib import rc from scipy.optimize import curve_fit import matplotlib.colors as mcolors #Write with LaTeX rc('text', usetex=True) rc('font', family='serif') def func(x, a, b): return (a * x) + b # Data B1 = np.array([9.38, 12.46, 15.57]) dB1 = np.arra...
[ "matplotlib.rc", "matplotlib.pyplot.show", "scipy.optimize.curve_fit", "numpy.array", "numpy.linspace", "numpy.diag", "matplotlib.pyplot.subplots" ]
[((169, 192), 'matplotlib.rc', 'rc', (['"""text"""'], {'usetex': '(True)'}), "('text', usetex=True)\n", (171, 192), False, 'from matplotlib import rc\n'), ((193, 219), 'matplotlib.rc', 'rc', (['"""font"""'], {'family': '"""serif"""'}), "('font', family='serif')\n", (195, 219), False, 'from matplotlib import rc\n'), ((2...
import os import numpy as np import logging from ..base import float_, int_ from .util import dataset_home, download, checksum, archive_extract, checkpoint log = logging.getLogger(__name__) _URL = 'http://ai.stanford.edu/~acoates/stl10/stl10_binary.tar.gz' _SHA1 = 'b22ebbd7f3c4384ebc9ba3152939186d3750b902' class ...
[ "numpy.load", "numpy.fromfile", "numpy.array", "numpy.reshape", "numpy.savez", "os.path.join", "logging.getLogger" ]
[((165, 192), 'logging.getLogger', 'logging.getLogger', (['__name__'], {}), '(__name__)\n', (182, 192), False, 'import logging\n'), ((796, 833), 'os.path.join', 'os.path.join', (['dataset_home', 'self.name'], {}), '(dataset_home, self.name)\n', (808, 833), False, 'import os\n'), ((859, 899), 'os.path.join', 'os.path.jo...
# -*- coding: utf-8 -*- """ Created on Mon Sep 13 21:46:14 2021 @author: Raj """ import sidpy as sid from sidpy.sid import Reader from sidpy.sid import Dimension import os import numpy as np import h5py from pyNSID.io.hdf_io import write_nsid_dataset from pyNSID.io.hdf_io import create_indexed_group, write_simple_a...
[ "h5py.File", "pyNSID.io.hdf_io.write_simple_attrs", "os.path.basename", "pyNSID.io.hdf_io.write_nsid_dataset", "os.path.realpath", "os.path.dirname", "numpy.zeros", "pyNSID.io.hdf_io.create_indexed_group", "os.path.exists", "numpy.split", "sidpy.Dataset.from_array", "numpy.arange", "numpy.ar...
[((1882, 1909), 'os.path.realpath', 'os.path.realpath', (['self.path'], {}), '(self.path)\n', (1898, 1909), False, 'import os\n'), ((1930, 1956), 'os.path.dirname', 'os.path.dirname', (['full_path'], {}), '(full_path)\n', (1945, 1956), False, 'import os\n'), ((1996, 2023), 'os.path.basename', 'os.path.basename', (['sel...
import sys,math import numpy as np import scipy.sparse.linalg as slin from scipy.sparse import coo_matrix, csr_matrix, csc_matrix from svddenseblock import * from mytools.ioutil import myreadfile from os.path import expanduser home = expanduser("~") def loadtensor2matricization(tensorfile, sumout=[], mtype=coo_matrix...
[ "numpy.array", "mytools.ioutil.myreadfile", "os.path.expanduser" ]
[((234, 249), 'os.path.expanduser', 'expanduser', (['"""~"""'], {}), "('~')\n", (244, 249), False, 'from os.path import expanduser\n'), ((499, 527), 'mytools.ioutil.myreadfile', 'myreadfile', (['tensorfile', '"""rb"""'], {}), "(tensorfile, 'rb')\n", (509, 527), False, 'from mytools.ioutil import myreadfile\n'), ((621, ...
import sys import os import numpy as np from sklearn import metrics from .model import SmileGAN from .utils import highest_matching_clustering, consensus_clustering, parse_validation_data from .clustering import Smile_GAN_train __author__ = "<NAME>" __copyright__ = "Copyright 2019-2020 The CBICA & SBIA Lab" __credits_...
[ "numpy.median", "numpy.std", "numpy.mean", "numpy.array", "sklearn.metrics.adjusted_rand_score", "os.path.join", "numpy.delete" ]
[((1793, 1822), 'numpy.median', 'np.median', (['model_aris'], {'axis': '(1)'}), '(model_aris, axis=1)\n', (1802, 1822), True, 'import numpy as np\n'), ((1876, 1901), 'numpy.delete', 'np.delete', (['median_aris', 'j'], {}), '(median_aris, j)\n', (1885, 1901), True, 'import numpy as np\n'), ((2263, 2282), 'numpy.mean', '...
import numpy as np import pandas as pd import io import re import warnings from scipy.stats import skew, skewtest from scipy.stats import rankdata from .plot_1var import * # from plot_1var import * # for local testing only from IPython.display import HTML def print_list(l, br=', '): o = '' for e in l: ...
[ "pandas.DataFrame", "fuzzywuzzy.fuzz.ratio", "io.StringIO", "fuzzywuzzy.fuzz.partial_ratio", "fuzzywuzzy.fuzz.token_sort_ratio", "warnings.simplefilter", "numpy.log", "numpy.datetime_as_string", "scipy.stats.rankdata", "numpy.timedelta64", "numpy.where", "pandas.Series", "fuzzywuzzy.fuzz.tok...
[((5613, 5660), 'warnings.simplefilter', 'warnings.simplefilter', (['"""ignore"""', 'RuntimeWarning'], {}), "('ignore', RuntimeWarning)\n", (5634, 5660), False, 'import warnings\n'), ((5883, 5896), 'io.StringIO', 'io.StringIO', ([], {}), '()\n', (5894, 5896), False, 'import io\n'), ((6257, 6289), 'pandas.DataFrame', 'p...
import os import allel import h5py import numpy as np import sys import time from fvTools import * if not len(sys.argv) in [13,15]: sys.exit("usage:\npython makeFeatureVecsForChrArmFromVcf_ogSHIC.py chrArmFileName chrArm chrLen targetPop winSize numSubWins maskFileName sampleToPopFileName ancestralArmFaFileName st...
[ "numpy.extract", "allel.read_vcf", "time.clock", "sys.stderr.write", "allel.GenotypeArray", "sys.exit" ]
[((2142, 2172), 'allel.read_vcf', 'allel.read_vcf', (['chrArmFileName'], {}), '(chrArmFileName)\n', (2156, 2172), False, 'import allel\n'), ((2223, 2279), 'numpy.extract', 'np.extract', (['(chroms == chrArm)', "chrArmFile['variants/POS']"], {}), "(chroms == chrArm, chrArmFile['variants/POS'])\n", (2233, 2279), True, 'i...
import os from datasets.types.data_split import DataSplit from datasets.SOT.constructor.base_interface import SingleObjectTrackingDatasetConstructor import numpy as np def construct_TrackingNet(constructor: SingleObjectTrackingDatasetConstructor, seed): root_path = seed.root_path data_type = seed.data_split ...
[ "os.path.dirname", "numpy.loadtxt", "os.path.join", "os.listdir" ]
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import pytest from ..width import nonparam_width, gauss_model, radial_profile from .testing_utils import generate_filament_model import numpy as np import numpy.testing as npt from scipy import ndimage as nd def generate_gaussian_profile(pts, width=3.0, amplitude=2.0, background=0.5): return amplitude * np.exp...
[ "numpy.ones_like", "numpy.roll", "numpy.testing.assert_allclose", "numpy.arange", "numpy.exp", "numpy.linspace", "pytest.mark.parametrize", "pytest.mark.xfail" ]
[((1239, 1278), 'pytest.mark.parametrize', 'pytest.mark.parametrize', (['"""theta"""', '[0.0]'], {}), "('theta', [0.0])\n", (1262, 1278), False, 'import pytest\n'), ((1969, 2022), 'pytest.mark.parametrize', 'pytest.mark.parametrize', (['"""cutoff"""', '[10.0, 20.0, 30.0]'], {}), "('cutoff', [10.0, 20.0, 30.0])\n", (199...
# CASA Next Generation Infrastructure # Copyright (C) 2021 AUI, Inc. Washington DC, USA # # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by # the Free Software Foundation, either version 3 of the License, or # (at your opt...
[ "matplotlib.pyplot.title", "psutil.virtual_memory", "numpy.sum", "casatools.quanta", "numpy.clip", "numpy.arange", "os.path.join", "numpy.unique", "multiprocessing.cpu_count", "pandas.DataFrame", "os.path.expanduser", "dask.distributed.Client", "numpy.prod", "casacore.tables.default_ms", ...
[((1379, 1436), 'warnings.filterwarnings', 'warnings.filterwarnings', (['"""ignore"""'], {'category': 'FutureWarning'}), "('ignore', category=FutureWarning)\n", (1402, 1436), False, 'import warnings\n'), ((2192, 2255), 'dask.config.set', 'dask.config.set', (["{'distributed.scheduler.allowed-failures': 10}"], {}), "({'d...
import math import os import xml.etree.ElementTree import numpy as np import paddle import six from PIL import Image from utils import image_util class Settings(object): def __init__(self, label_file_path=None, resize_h=300, resize_w=300, mean_...
[ "numpy.random.uniform", "utils.image_util.sampler", "utils.image_util.crop_image", "utils.image_util.generate_batch_samples", "PIL.Image.open", "os.path.exists", "numpy.array", "numpy.swapaxes", "PIL.Image.fromarray", "utils.image_util.distort_image", "paddle.reader.multiprocess_reader", "nump...
[((3440, 3453), 'numpy.array', 'np.array', (['img'], {}), '(img)\n', (3448, 3453), True, 'import numpy as np\n'), ((6376, 6401), 'numpy.random.shuffle', 'np.random.shuffle', (['images'], {}), '(images)\n', (6393, 6401), True, 'import numpy as np\n'), ((3012, 3073), 'utils.image_util.generate_batch_samples', 'image_util...
import numpy as np from napari.utils import nbscreenshot def test_nbscreenshot(viewer_factory): """Test taking a screenshot.""" view, viewer = viewer_factory() np.random.seed(0) data = np.random.random((10, 15)) viewer.add_image(data) rich_display_object = nbscreenshot(viewer) assert ha...
[ "numpy.random.random", "numpy.random.seed", "napari.utils.nbscreenshot" ]
[((176, 193), 'numpy.random.seed', 'np.random.seed', (['(0)'], {}), '(0)\n', (190, 193), True, 'import numpy as np\n'), ((205, 231), 'numpy.random.random', 'np.random.random', (['(10, 15)'], {}), '((10, 15))\n', (221, 231), True, 'import numpy as np\n'), ((286, 306), 'napari.utils.nbscreenshot', 'nbscreenshot', (['view...
import os import numpy as np import torch import torch.nn as nn import matplotlib.pyplot as plt from medpy.metric import binary #use gpu if available device = torch.device("cuda" if torch.cuda.is_available() else "cpu") class AE(nn.Module): def __init__(self, latent_size=100): super().__init__() self.init_...
[ "matplotlib.pyplot.title", "torch.nn.Dropout", "os.mkdir", "torch.cat", "numpy.mean", "torch.nn.Softmax", "torch.no_grad", "torch.nn.MSELoss", "numpy.copy", "medpy.metric.binary.dc", "matplotlib.pyplot.show", "matplotlib.pyplot.legend", "torch.nn.Conv2d", "torch.nn.BatchNorm2d", "torch.c...
[((8627, 8663), 'matplotlib.pyplot.plot', 'plt.plot', (['losses', '"""-x"""'], {'label': '"""loss"""'}), "(losses, '-x', label='loss')\n", (8635, 8663), True, 'import matplotlib.pyplot as plt\n'), ((8666, 8685), 'matplotlib.pyplot.xlabel', 'plt.xlabel', (['"""epoch"""'], {}), "('epoch')\n", (8676, 8685), True, 'import ...
# -*- coding: utf-8 -*- """ Created on Fri Aug 30 20:15:18 2019 @author: autol """ #%% from plotxy import plot_gd_xy,iters_gd_plot,plot_gd_contour from initdata import init_data,init_data1,data_b,init_data_house from func import gradient_descent_f from varclass import VarSetX from sklearn.model_selection import Param...
[ "numpy.stack", "numpy.random.uniform", "varclass.VarSetX", "plotxy.plot_gd_contour", "numpy.ones", "initdata.data_b", "plotxy.iters_gd_plot", "numpy.amax", "initdata.init_data1", "func.gradient_descent_f", "matplotlib.pyplot.subplots" ]
[((402, 412), 'numpy.ones', 'np.ones', (['(2)'], {}), '(2)\n', (409, 412), True, 'import numpy as np\n'), ((419, 444), 'initdata.init_data1', 'init_data1', (['n', '(45)', 'w'], {'b': '(0)'}), '(n, 45, w, b=0)\n', (429, 444), False, 'from initdata import init_data, init_data1, data_b, init_data_house\n'), ((502, 511), '...
########################################################## # pytorch-kaldi v.0.1 # <NAME>, <NAME> # Mila, University of Montreal # October 2018 # # Description: This script generates kaldi ark files containing raw features. # The file list must be a file containing "snt_id file.wav". # Note that only wav files are supp...
[ "data_io.write_mat", "numpy.abs", "os.makedirs", "os.stat", "data_io.read_vec_int_ark", "numpy.asarray", "numpy.zeros", "math.floor" ]
[((1797, 1816), 'os.stat', 'os.stat', (['out_folder'], {}), '(out_folder)\n', (1804, 1816), False, 'import os\n'), ((3554, 3575), 'numpy.asarray', 'np.asarray', (['frame_all'], {}), '(frame_all)\n', (3564, 3575), True, 'import numpy as np\n'), ((3670, 3724), 'data_io.write_mat', 'write_mat', (['out_folder', 'out_file',...
import argparse import numpy as np from scipy.io import wavfile from tqdm import trange from ar_model import ARmodel def correctSignal(signal, model, window_size, pred_size, step, treshold=3): """Correct signal using AR model Args: signal (np.array): signal to correct model (ARmodel): autoreg...
[ "numpy.abs", "argparse.ArgumentParser", "numpy.copy", "tqdm.trange", "numpy.std", "scipy.io.wavfile.read", "ar_model.ARmodel", "scipy.io.wavfile.write", "numpy.linspace" ]
[((711, 726), 'numpy.copy', 'np.copy', (['signal'], {}), '(signal)\n', (718, 726), True, 'import numpy as np\n'), ((741, 798), 'tqdm.trange', 'trange', (['(0)', '(input.shape[0] - window_size - pred_size)', 'step'], {}), '(0, input.shape[0] - window_size - pred_size, step)\n', (747, 798), False, 'from tqdm import trang...
import unittest from numpy import hstack, max, abs, sqrt from cantera import Solution, gas_constant import numpy as np from spitfire import ChemicalMechanismSpec from os.path import join, abspath from subprocess import getoutput test_mech_directory = abspath(join('tests', 'test_mechanisms', 'old_xmls')) mechs = [x.rep...
[ "unittest.main", "spitfire.ChemicalMechanismSpec", "numpy.sum", "numpy.abs", "numpy.copy", "numpy.empty", "numpy.zeros", "numpy.ones", "numpy.hstack", "numpy.finfo", "cantera.Solution", "subprocess.getoutput", "os.path.join" ]
[((260, 304), 'os.path.join', 'join', (['"""tests"""', '"""test_mechanisms"""', '"""old_xmls"""'], {}), "('tests', 'test_mechanisms', 'old_xmls')\n", (264, 304), False, 'from os.path import join, abspath\n'), ((809, 829), 'numpy.copy', 'np.copy', (['rhs_chem_in'], {}), '(rhs_chem_in)\n', (816, 829), True, 'import numpy...
import matplotlib, numpy, pprint # matplotlib.rcParams['pdf.fonttype'] = 42 # matplotlib.rcParams['ps.fonttype'] = 42 matplotlib.use('Agg') import matplotlib.pyplot as plot import gzip, csv, pylab from collections import namedtuple from rvs import * from patch import * """ task events table contains the following fie...
[ "matplotlib.pyplot.yscale", "csv.reader", "matplotlib.pyplot.step", "matplotlib.pyplot.figure", "numpy.mean", "numpy.arange", "matplotlib.pyplot.gca", "csv.writer", "matplotlib.pyplot.ylim", "matplotlib.pyplot.legend", "numpy.sort", "matplotlib.use", "matplotlib.pyplot.ylabel", "matplotlib...
[((118, 139), 'matplotlib.use', 'matplotlib.use', (['"""Agg"""'], {}), "('Agg')\n", (132, 139), False, 'import matplotlib, numpy, pprint\n'), ((2584, 2613), 'csv.writer', 'csv.writer', (['wf'], {'delimiter': '""","""'}), "(wf, delimiter=',')\n", (2594, 2613), False, 'import gzip, csv, pylab\n'), ((4766, 4794), 'collect...
from readwrite import get_data import pandas as pd import matplotlib.pyplot as plt from scipy.stats import gaussian_kde import numpy as np def scatter(path, name): data = get_data(path) pd_data = pd.DataFrame(data) plt.title("column 0 " + name) plt.plot(pd_data[0]) plt.show() plt.title("column 1 " + name) plt...
[ "pandas.DataFrame", "matplotlib.pyplot.title", "matplotlib.pyplot.show", "matplotlib.pyplot.plot", "matplotlib.pyplot.boxplot", "scipy.stats.gaussian_kde", "numpy.linspace", "readwrite.get_data" ]
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#!/usr/bin/env python """ # Author: <NAME> # Created Time : Tue 29 Sep 2020 01:41:23 PM CST # File Name: function.py # Description: """ import torch import numpy as np import os import scanpy as sc from anndata import AnnData from .data import load_data from .net.vae import VAE from .net.utils import EarlyStopping ...
[ "scanpy.tl.umap", "numpy.random.seed", "os.makedirs", "torch.manual_seed", "torch.load", "scanpy.pp.neighbors", "scanpy.read_h5ad", "scanpy.pl.umap", "torch.save", "scanpy.tl.leiden", "sklearn.neighbors.KNeighborsClassifier", "torch.cuda.is_available", "torch.cuda.set_device", "anndata.Ann...
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#!/usr/bin/env python3 # -*- coding: utf-8 -*- """ Created on Fri Apr 10 14:19:04 2020 @author: corkep """ import numpy as np import numpy.testing as nt import unittest from math import pi import math from scipy.linalg import logm, expm from spatialmath.base.transformsNd import * from spatialmath.base.transforms3d ...
[ "unittest.main", "spatialmath.base.transforms3d.rotx", "spatialmath.base.transforms2d.ishom2", "spatialmath.base.transforms2d.isrot2", "numpy.testing.assert_almost_equal", "spatialmath.base.transforms2d.rot2", "numpy.zeros", "spatialmath.base.transforms3d.isrot", "spatialmath.base.transforms2d.trot2...
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#!/usr/bin/env python3 # -*- coding: utf-8 -*- """ Created on Mon Jan 27 16:40:49 2020 @author: krugefr1 """ import numpy as np import os try: import arthor except ImportError: arthor = None from rdkit import Chem from rdkit.Chem import rdSubstructLibrary import pickle import random import pandas as pd import...
[ "rdkit.Chem.PatternFingerprint", "os.mkdir", "pickle.dump", "numpy.argmax", "rdkit.Chem.MolToSmiles", "pandas.DataFrame", "os.path.exists", "random.seed", "rdkit.Chem.rdSubstructLibrary.PatternHolder", "copy.deepcopy", "automated_series_classification.Butinaclustering.ApplyButina", "automated_...
[((1502, 1653), 'automated_series_classification.utilsDataPrep.PrepareData', 'utilsDataPrep.PrepareData', (['self.proj', 'self.datapath', 'filename'], {'distMeasure': '"""Tanimoto"""', 'FP': '"""Morgan2"""', 'calcDists': 'self.calcDists', 'smilesCol': 'smilesCol'}), "(self.proj, self.datapath, filename, distMeasure=\n ...
""" Helper script to create config files for BlenderProc. """ import os import yaml import random import numpy as np import binascii # these paths have to be manually set before creating a config BLENDERPROC_ROOT = '' # /path/to/BlenderProc SHAPENET_ROOT = '' # /path/to/ShapeNetCore.v2 SUNCG_ROOT = '' # /path/to/s...
[ "numpy.random.uniform", "yaml.load", "os.makedirs", "binascii.hexlify", "yaml.dump", "random.choice", "numpy.random.randint", "os.path.join", "os.urandom" ]
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import h5py import numpy as np def load_data(fname): # load in an hdf5 file and return the X and y values data_file = h5py.File(fname) # load in X and y training data, fully into memory X = data_file['X'][:].reshape(-1, 1) # each row is a data point y = data_file['y'][:] return X, y def eval...
[ "h5py.File", "numpy.abs" ]
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import time import logging import cv2 import numpy as np from deep_sort_realtime.deep_sort import nn_matching from deep_sort_realtime.deep_sort.detection import Detection from deep_sort_realtime.deep_sort.tracker import Tracker from deep_sort_realtime.utils.nms import non_max_suppression log_level = logging.DEBUG d...
[ "deep_sort_realtime.deep_sort.tracker.Tracker", "deep_sort_realtime.utils.nms.non_max_suppression", "cv2.bitwise_and", "deep_sort_realtime.deep_sort.detection.Detection", "logging.StreamHandler", "numpy.zeros", "cv2.fillPoly", "logging.Formatter", "deep_sort_realtime.embedder.embedder_pytorch.Mobile...
[((336, 365), 'logging.getLogger', 'logging.getLogger', (['"""DeepSORT"""'], {}), "('DeepSORT')\n", (353, 365), False, 'import logging\n'), ((411, 434), 'logging.StreamHandler', 'logging.StreamHandler', ([], {}), '()\n', (432, 434), False, 'import logging\n'), ((475, 534), 'logging.Formatter', 'logging.Formatter', (['"...
import cv2 import os import numpy as np from PIL import Image import picamera.array from picamera import PiCamera class Face(object): training_count = 5 threshold = 30 def __init__(self, casc_path, path="./passwords", camera_port=0): self.path = path self._cascade = cv2.CascadeClassifi...
[ "cv2.cv.cvtColor", "cv2.imwrite", "PIL.Image.open", "cv2.face.createLBPHFaceRecognizer", "numpy.array", "cv2.CascadeClassifier", "cv2.destroyAllWindows", "os.path.join", "os.listdir", "picamera.PiCamera" ]
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from __future__ import print_function import argparse import os import csv import numpy as np import random import torch import torch.nn as nn import torch.optim as optim import torch.nn.functional as F from torch.utils.data import Dataset, DataLoader from data_utils.data_util import PointcloudScaleAndTran...
[ "os.mkdir", "torch.optim.lr_scheduler.StepLR", "argparse.ArgumentParser", "numpy.argmax", "models.rscnn.RSCNN", "data_utils.ModelNetDataLoader.ModelNetDataLoader", "models.pointnet.PointNetCls", "sys.path.append", "models.pointnet2.PointNet2ClsMsg", "random.randint", "torch.utils.data.DataLoader...
[((637, 662), 'sys.path.append', 'sys.path.append', (['"""./emd/"""'], {}), "('./emd/')\n", (652, 662), False, 'import sys\n'), ((882, 905), 'os.path.exists', 'os.path.exists', (['logname'], {}), '(logname)\n', (896, 905), False, 'import os\n'), ((4609, 4634), 'argparse.ArgumentParser', 'argparse.ArgumentParser', ([], ...
from __future__ import print_function, division import torch import os import pandas as pd from skimage import io, transform import numpy as np from torch.utils.data import Dataset, DataLoader from torchvision import transforms, utils import sklearn import sklearn.metrics as sklm import csv import argparse import torc...
[ "pandas.read_csv", "numpy.empty", "torch.get_rng_state", "torch.cuda.device_count", "numpy.mean", "torchvision.transforms.Normalize", "numpy.nanmean", "torch.nn.BCELoss", "torch.utils.data.DataLoader", "torchvision.transforms.Scale", "numpy.std", "CXRDataset.CXRDataset", "torch.load", "os....
[((673, 698), 'torch.cuda.is_available', 'torch.cuda.is_available', ([], {}), '()\n', (696, 698), False, 'import torch\n'), ((885, 896), 'importlib.reload', 'reload', (['CXR'], {}), '(CXR)\n', (891, 896), False, 'from importlib import reload\n'), ((897, 906), 'importlib.reload', 'reload', (['E'], {}), '(E)\n', (903, 90...
# coding: utf-8 # # This code is part of lattpy. # # Copyright (c) 2021, <NAME> # # This code is licensed under the MIT License. The copyright notice in the # LICENSE file in the root directory and this permission notice shall # be included in all copies or substantial portions of the Software. """Contains miscellaneo...
[ "numpy.zeros_like", "numpy.abs", "logging.StreamHandler", "logging.getLogger", "logging.Formatter", "numpy.min_scalar_type", "numpy.min", "numpy.max", "numpy.unique" ]
[((851, 878), 'logging.getLogger', 'logging.getLogger', (['"""lattpy"""'], {}), "('lattpy')\n", (868, 878), False, 'import logging\n'), ((886, 909), 'logging.StreamHandler', 'logging.StreamHandler', ([], {}), '()\n', (907, 909), False, 'import logging\n'), ((1038, 1086), 'logging.Formatter', 'logging.Formatter', (['_FR...
import numpy as np import torch import torch.optim as optim import torch.nn as nn from torch.autograd import Variable import skimage.io as io import argparse import os import sys import time # Allow python3 to search for modules outside of this directory sys.path.append("../") from models.skip import skip3d from vo...
[ "argparse.ArgumentParser", "torch.randn", "torch.cos", "tools.Ops.volume_proj", "os.path.join", "tools.Ops.rotate_volume", "sys.path.append", "os.path.exists", "torch.zeros", "tools.Ops.load_binvox", "tools.Ops.tvloss3d", "torch.nn.ConstantPad3d", "torch.optim.Adam", "torch.clamp", "nump...
[((257, 279), 'sys.path.append', 'sys.path.append', (['"""../"""'], {}), "('../')\n", (272, 279), False, 'import sys\n'), ((714, 785), 'argparse.ArgumentParser', 'argparse.ArgumentParser', ([], {'description': '"""Reconstruciton using deep prior."""'}), "(description='Reconstruciton using deep prior.')\n", (737, 785), ...
#!/usr/bin/env python import argparse from ast import parse import numpy as np import bitstring def to_fixed(x, args): F = args.fixed_point_bits[0] - args.fixed_point_bits[1] return np.round(x * 2**F) def to_float(x, args): F = args.fixed_point_bits[0] - args.fixed_point_bits[1] return x * 2**-F def ...
[ "numpy.load", "numpy.save", "numpy.flip", "argparse.ArgumentParser", "bitstring.pack", "numpy.round" ]
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""" @brief This file holds classes that store information about the endoscopic images that are going to be segmented. @author <NAME> (<EMAIL>). @date 25 Aug 2015. """ import numpy as np import os import cv2 # import caffe import sys import random import matplotlib.pyplot as plt import scipy.misc import imut...
[ "numpy.sum", "numpy.ones", "matplotlib.pyplot.figure", "numpy.arange", "common.randbin", "cv2.imencode", "cv2.filter2D", "cv2.cvtColor", "matplotlib.pyplot.imshow", "cv2.imwrite", "numpy.max", "cv2.LUT", "cv2.minEnclosingCircle", "numpy.flipud", "numpy.min", "cv2.createCLAHE", "numpy...
[((533, 553), 'numpy.random.seed', 'np.random.seed', (['seed'], {}), '(seed)\n', (547, 553), True, 'import numpy as np\n'), ((562, 587), 'numpy.arange', 'np.arange', (['(256)'], {'dtype': 'int'}), '(256, dtype=int)\n', (571, 587), True, 'import numpy as np\n'), ((594, 614), 'numpy.random.shuffle', 'np.random.shuffle', ...
# Copyright 2019 The TensorFlow Authors. All Rights Reserved. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applica...
[ "tensorflow.python.ops.math_ops.argmin", "tensorflow.python.ipu.config.IPUConfig", "tensorflow.python.ops.math_ops.argmax", "numpy.argmax", "numpy.dtype", "numpy.argmin", "tensorflow.python.platform.googletest.main", "os.environ.get", "test_utils.ReportJSON", "tensorflow.python.framework.ops.devic...
[((1394, 1426), 'numpy.issubdtype', 'np.issubdtype', (['dtype', 'np.integer'], {}), '(dtype, np.integer)\n', (1407, 1426), True, 'import numpy as np\n'), ((1730, 1772), 'absl.testing.parameterized.named_parameters', 'parameterized.named_parameters', (['*TESTCASES'], {}), '(*TESTCASES)\n', (1760, 1772), False, 'from abs...
import pyHiChi as pfc import numpy as np import math as ma def valueEx(x, y, z): Ex = 0 #for x or y #Ex=np.sin(z) #for z return Ex def valueEy(x, y, z): #Ey = 0 #for y or z #Ey = np.sin(x) #for x Ey = np.sin(x - z) #for xz return Ey def valueEz(x, y, z): Ez = 0 #for x or z or xz #Ez = np.sin(y) #for y retur...
[ "matplotlib.pyplot.show", "numpy.zeros", "pyHiChi.PeriodicalBC", "matplotlib.animation.FuncAnimation", "numpy.sin", "numpy.arange", "pyHiChi.vector3d", "pyHiChi.YeeGrid", "numpy.sqrt", "matplotlib.pyplot.subplots", "pyHiChi.FDTD" ]
[((902, 926), 'pyHiChi.vector3d', 'pfc.vector3d', (['(20)', '(20)', '(20)'], {}), '(20, 20, 20)\n', (914, 926), True, 'import pyHiChi as pfc\n'), ((939, 966), 'pyHiChi.vector3d', 'pfc.vector3d', (['(0.0)', '(0.0)', '(0.0)'], {}), '(0.0, 0.0, 0.0)\n', (951, 966), True, 'import pyHiChi as pfc\n'), ((979, 1024), 'pyHiChi....
# ORIE 7590 import numpy as np from bd_sim_cython import discrete_bessel_sim, discrete_laguerre_sim, cmeixner from scipy.special import jv, laguerre, poch, eval_laguerre, j0 from scipy.integrate import quad from math import comb, factorial, exp, sqrt, log import hankel def bd_simulator(t, x0, num_paths, method='besse...
[ "math.exp", "hankel.HankelTransform", "numpy.maximum", "scipy.special.eval_laguerre", "numpy.polyval", "numpy.random.exponential", "numpy.zeros", "numpy.ones", "numpy.random.gamma", "scipy.special.poch", "numpy.mean", "numpy.array", "numpy.random.poisson", "scipy.special.j0", "numpy.eye"...
[((887, 928), 'numpy.zeros', 'np.zeros', ([], {'dtype': 'np.int64', 'shape': 'num_paths'}), '(dtype=np.int64, shape=num_paths)\n', (895, 928), True, 'import numpy as np\n'), ((6930, 6941), 'numpy.zeros', 'np.zeros', (['N'], {}), '(N)\n', (6938, 6941), True, 'import numpy as np\n'), ((7984, 8027), 'hankel.HankelTransfor...
import os.path as osp import sys import numpy as np import torch from matplotlib import pyplot as plt from scipy.stats import norm sys.path.append(osp.dirname(sys.path[0])) from neko import neko_utils class utils(neko_utils.neko_utils): def __init__(self): super(utils, self).__init__() def plot_lat...
[ "matplotlib.pyplot.show", "matplotlib.pyplot.imshow", "os.path.dirname", "numpy.zeros", "matplotlib.pyplot.figure", "torch.Tensor", "numpy.array", "numpy.linspace" ]
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