code
stringlengths
31
1.05M
apis
list
extract_api
stringlengths
97
1.91M
#!/usr/bin/python import sys, time import numpy as np from math import * import argparse import general_scripts as gs from distutils.version import LooseVersion def read_file(fn, field, key="none"): legs=[] nplots=0 nlines=[] xlist=[] ylist=[] tmp=0 tmpx=[] tmpy=[] if key=="none":...
[ "argparse.ArgumentParser", "general_scripts.print_sxylist", "numpy.array", "numpy.zeros", "numpy.stack", "numpy.array_equal", "numpy.interp", "sys.exit", "distutils.version.LooseVersion", "time.time" ]
[((2807, 3199), 'argparse.ArgumentParser', 'argparse.ArgumentParser', ([], {'description': '"""Takes a number of xmgrace-like files containing equivalent dataeach from a different replicate, and perform averaging acrossthese files.More info: For each file containing sets of difference curves,e.g. s0, s1, s2... perform ...
""" Evaluation Scripts """ from __future__ import absolute_import from __future__ import division from collections import namedtuple, OrderedDict from network import mynn import argparse import logging import os import torch import time import numpy as np from config import cfg, assert_and_infer_cfg import network imp...
[ "network.get_net", "sklearn.metrics.auc", "config.assert_and_infer_cfg", "numpy.array", "sklearn.metrics.roc_curve", "os.path.exists", "os.listdir", "argparse.ArgumentParser", "numpy.random.seed", "numpy.concatenate", "torchvision.transforms.ToTensor", "torch.nn.SyncBatchNorm.convert_sync_batc...
[((756, 781), 'os.path.dirname', 'os.path.dirname', (['__file__'], {}), '(__file__)\n', (771, 781), False, 'import os\n'), ((806, 863), 'os.path.join', 'os.path.join', (['dirname', '"""pretrained/r101_os8_base_cty.pth"""'], {}), "(dirname, 'pretrained/r101_os8_base_cty.pth')\n", (818, 863), False, 'import os\n'), ((892...
# Copyright 2022 The TensorFlow Authors. All Rights Reserved. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applica...
[ "numpy.ones_like", "official.nlp.data.tagging_dataloader.TaggingDataConfig", "absl.testing.parameterized.parameters", "tensorflow.io.TFRecordWriter", "tensorflow.test.main", "numpy.random.randint", "tensorflow.train.Features", "official.nlp.data.tagging_dataloader.TaggingDataLoader" ]
[((924, 957), 'tensorflow.io.TFRecordWriter', 'tf.io.TFRecordWriter', (['output_path'], {}), '(output_path)\n', (944, 957), True, 'import tensorflow as tf\n'), ((1853, 1890), 'absl.testing.parameterized.parameters', 'parameterized.parameters', (['(True)', '(False)'], {}), '(True, False)\n', (1877, 1890), False, 'from a...
# -*- coding:utf-8 -*- import cv2 import numpy as np def cvcar(videoUrl, pic): weightsPath = 'yolov3.weights' # 模型权重文件 configPath = 'yolov3.cfg' # 模型配置文件 labelsPath = 'yolov3.txt' # 模型类别标签文件 # 初始化一些参数 LABELS = open(labelsPath).read().strip().split("\n") boxes = [] confidences = [] ...
[ "cv2.dnn.blobFromImage", "cv2.imwrite", "cv2.rectangle", "numpy.argmax", "cv2.putText", "numpy.array", "cv2.VideoCapture", "cv2.dnn.NMSBoxes", "cv2.imread", "cv2.dnn.readNetFromDarknet" ]
[((387, 438), 'cv2.dnn.readNetFromDarknet', 'cv2.dnn.readNetFromDarknet', (['configPath', 'weightsPath'], {}), '(configPath, weightsPath)\n', (413, 438), False, 'import cv2\n'), ((509, 532), 'cv2.imwrite', 'cv2.imwrite', (['pic', 'frame'], {}), '(pic, frame)\n', (520, 532), False, 'import cv2\n'), ((545, 560), 'cv2.imr...
# -*- coding: utf-8 -*- """ Created on Sat Oct 16 15:45:10 2021 @author: trite """ from MIDISynth import midi2piece import numpy as np from pathlib import Path file_name = 'tempest' file_path = Path('..') / Path('data') / Path('midi') \ / Path(file_name + 'mid') piece = midi2piece(file_name, file_path...
[ "pathlib.Path", "numpy.arange", "MIDISynth.midi2piece" ]
[((289, 326), 'MIDISynth.midi2piece', 'midi2piece', (['file_name', 'file_path', '(1.0)'], {}), '(file_name, file_path, 1.0)\n', (299, 326), False, 'from MIDISynth import midi2piece\n'), ((257, 280), 'pathlib.Path', 'Path', (["(file_name + 'mid')"], {}), "(file_name + 'mid')\n", (261, 280), False, 'from pathlib import P...
from collections import namedtuple, deque from random import sample, random, randint from math import exp from numpy import array, zeros, argmax import numpy as np from tensorflow.keras.models import Sequential from tensorflow.keras.layers import Conv1D, MaxPool1D, LSTM, Dropout, Flatten, Dense from tensorflow.keras.op...
[ "random.sample", "collections.namedtuple", "collections.deque", "tensorflow.keras.layers.Dropout", "numpy.argmax", "numpy.max", "tensorflow.keras.optimizers.Adam", "numpy.array", "numpy.zeros", "tensorflow.keras.layers.Dense", "tensorflow.keras.layers.LSTM", "tensorflow.keras.layers.Conv1D", ...
[((548, 637), 'collections.namedtuple', 'namedtuple', (['"""Transition"""', "('Current_State', 'Action', 'Reward', 'Next_State', 'done')"], {}), "('Transition', ('Current_State', 'Action', 'Reward', 'Next_State',\n 'done'))\n", (558, 637), False, 'from collections import namedtuple, deque\n'), ((1070, 1096), 'collec...
import csv from datetime import datetime, timezone import numpy as np from exetera.core.session import Session from exetera.core.persistence import DataStore from exetera.core import utils, dataframe, dataset from exetera.core import persistence as prst from exeteracovid.algorithms.test_type_from_mechanism import tes...
[ "exeteracovid.algorithms.test_type_from_mechanism.pcr_standard_summarize", "numpy.ones_like", "exetera.core.session.Session", "exetera.core.persistence.foreign_key_is_in_primary_key", "numpy.where", "csv.writer", "exeteracovid.algorithms.test_type_from_mechanism.test_type_from_mechanism_v2", "numpy.lo...
[((1109, 1120), 'exetera.core.persistence.DataStore', 'DataStore', ([], {}), '()\n', (1118, 1120), False, 'from exetera.core.persistence import DataStore\n'), ((1130, 1156), 'datetime.datetime.now', 'datetime.now', (['timezone.utc'], {}), '(timezone.utc)\n', (1142, 1156), False, 'from datetime import datetime, timezone...
import operator import logging import numpy as np import pandas as pd from .coordinates import Coordinates from .visual import VisualAttributes from .visual import COLORS from .exceptions import IncompatibleAttribute from .component_link import (ComponentLink, CoordinateComponentLink, Bin...
[ "numpy.product", "logging.debug", "numpy.unique", "numpy.searchsorted", "numpy.asarray", "numpy.can_cast", "numpy.issubdtype", "numpy.isfinite", "numpy.broadcast_arrays", "numpy.random.RandomState" ]
[((5012, 5080), 'logging.debug', 'logging.debug', (['"""Using %s to index data of shape %s"""', 'key', 'self.shape'], {}), "('Using %s to index data of shape %s', key, self.shape)\n", (5025, 5080), False, 'import logging\n'), ((5236, 5273), 'numpy.can_cast', 'np.can_cast', (['self.data[0]', 'np.complex'], {}), '(self.d...
import sys from timeit import timeit import matplotlib.pyplot as plt import numpy as np # from numba import jit, njit # from numba.typed import List from statistics import mean import ray from multiprocessing import Pool # Silences Numba warnings about a Python list being passed into a numba function import warnings ...
[ "statistics.mean", "ray.get", "matplotlib.pyplot.ylabel", "matplotlib.pyplot.xlabel", "matplotlib.pyplot.plot", "julia.Main.include", "numpy.array", "multiprocessing.Pool", "matplotlib.pyplot.autoscale", "matplotlib.pyplot.title", "matplotlib.pyplot.xlim", "warnings.filterwarnings", "matplot...
[((320, 353), 'warnings.filterwarnings', 'warnings.filterwarnings', (['"""ignore"""'], {}), "('ignore')\n", (343, 353), False, 'import warnings\n'), ((878, 912), 'numpy.array', 'np.array', (['pyList'], {'dtype': 'np.float64'}), '(pyList, dtype=np.float64)\n', (886, 912), True, 'import numpy as np\n'), ((4029, 4057), 'j...
#! /usr/bin/env python #<NAME> #<EMAIL> import sys import os import argparse import numpy as np from osgeo import gdal from pygeotools.lib import iolib #Can use ASP image_calc for multithreaded ndv replacement of huge images #image_calc -o ${1%.*}_ndv.tif -c 'var_0' --output-nodata-value $2 $1 def getparser(): ...
[ "osgeo.gdal.Open", "pygeotools.lib.iolib.ds_getma", "argparse.ArgumentParser", "numpy.ma.fix_invalid", "pygeotools.lib.iolib.get_ndv_b", "os.path.splitext" ]
[((331, 397), 'argparse.ArgumentParser', 'argparse.ArgumentParser', ([], {'description': '"""Replace raster NoData value"""'}), "(description='Replace raster NoData value')\n", (354, 397), False, 'import argparse\n'), ((1175, 1192), 'osgeo.gdal.Open', 'gdal.Open', (['src_fn'], {}), '(src_fn)\n', (1184, 1192), False, 'f...
#!/usr/bin/env python2 # -*- coding: utf-8 -*- """ Created on Mon Jul 1 13:38:59 2019 @author: ryancompton """ import os import pandas as pd import numpy as np print("CONVERTING ACCOUNTS TO AMLSIM FORMATTED ACCOUNTS") file_path = os.path.join("output_datasets") files = [os.path.join(file_path,x) for x in os.list...
[ "os.listdir", "pandas.read_csv", "numpy.random.choice", "os.path.join", "numpy.random.randint" ]
[((236, 267), 'os.path.join', 'os.path.join', (['"""output_datasets"""'], {}), "('output_datasets')\n", (248, 267), False, 'import os\n'), ((416, 447), 'pandas.read_csv', 'pd.read_csv', (['latest_account_csv'], {}), '(latest_account_csv)\n', (427, 447), True, 'import pandas as pd\n'), ((792, 823), 'pandas.read_csv', 'p...
# -*- coding: utf-8 -*- """ Created on Wed Oct 12 19:07:50 2016 @author: ngordon """ #============================================================================== # 3d animation 0 stackoverflow #============================================================================== import numpy as np from mpl_t...
[ "numpy.sin", "matplotlib.pyplot.figure", "numpy.cos", "matplotlib.pyplot.show" ]
[((855, 867), 'matplotlib.pyplot.figure', 'plt.figure', ([], {}), '()\n', (865, 867), True, 'import matplotlib.pyplot as plt\n'), ((995, 1005), 'matplotlib.pyplot.show', 'plt.show', ([], {}), '()\n', (1003, 1005), True, 'import matplotlib.pyplot as plt\n'), ((526, 539), 'numpy.cos', 'np.cos', (['angle'], {}), '(angle)\...
import numpy as np from numpy import abs, cos, exp, mean, pi, prod, sin, sqrt, sum from autotune import TuningProblem from autotune.space import * # problem space task_space = None input_space = Space([ Real(-15, 15, name=f'x_{i}') for i in range(10) ]) output_space = Space([ Real(-inf, inf, name='y') ]) de...
[ "numpy.sqrt", "autotune.TuningProblem", "numpy.exp", "numpy.sum", "numpy.cos", "numpy.asarray_chkfinite" ]
[((721, 855), 'autotune.TuningProblem', 'TuningProblem', ([], {'task_space': 'None', 'input_space': 'input_space', 'output_space': 'output_space', 'objective': 'myobj', 'constraints': 'None', 'model': 'None'}), '(task_space=None, input_space=input_space, output_space=\n output_space, objective=myobj, constraints=Non...
import numpy as np import pandas as pd MAXEPOCH = 1000 file = open("Train.txt") lines = file.readlines() numClass, numFeature, datasetLen = 0, 0, 0 dataset = [] count = 0 for line in lines: if count == 0: var = line.split() numFeature = int(var[0]) numClass = int(var[1]) datas...
[ "numpy.array", "numpy.dot", "numpy.zeros", "numpy.random.seed", "numpy.random.uniform" ]
[((625, 643), 'numpy.random.seed', 'np.random.seed', (['(41)'], {}), '(41)\n', (639, 643), True, 'import numpy as np\n'), ((648, 690), 'numpy.random.uniform', 'np.random.uniform', (['(-10)', '(10)', '(numFeature + 1)'], {}), '(-10, 10, numFeature + 1)\n', (665, 690), True, 'import numpy as np\n'), ((961, 975), 'numpy.a...
import numpy as np from .binarygrid_util import MfGrdFile def get_structured_faceflows( flowja, grb_file=None, ia=None, ja=None, verbose=False ): """ Get the face flows for the flow right face, flow front face, and flow lower face from the MODFLOW 6 flowja flows. This method can be useful for bui...
[ "numpy.zeros" ]
[((3865, 3893), 'numpy.zeros', 'np.zeros', (['nodes'], {'dtype': 'float'}), '(nodes, dtype=float)\n', (3873, 3893), True, 'import numpy as np\n'), ((1796, 1824), 'numpy.zeros', 'np.zeros', (['shape'], {'dtype': 'float'}), '(shape, dtype=float)\n', (1804, 1824), True, 'import numpy as np\n'), ((1845, 1873), 'numpy.zeros...
#!/usr/bin/python3 ''' Summary: Script to process images and update the database ''' import datetime import os import sqlite3 from pathlib import Path from sqlite3 import Error import cv2 import numpy as np from numpy import array from shapely.geometry import Polygon, asPoint import mrcnn.config from mrcnn.model impo...
[ "os.path.exists", "sqlite3.connect", "pathlib.Path", "numpy.delete", "os.path.join", "os.path.dirname", "numpy.array", "datetime.datetime.now", "cv2.destroyAllWindows", "cv2.VideoCapture", "shapely.geometry.Polygon" ]
[((1720, 1750), 'os.path.join', 'os.path.join', (['ROOT_DIR', '"""logs"""'], {}), "(ROOT_DIR, 'logs')\n", (1732, 1750), False, 'import os\n'), ((1807, 1850), 'os.path.join', 'os.path.join', (['ROOT_DIR', '"""mask_rcnn_coco.h5"""'], {}), "(ROOT_DIR, 'mask_rcnn_coco.h5')\n", (1819, 1850), False, 'import os\n'), ((356, 38...
""" Python implementation of the LiNGAM algorithms. The LiNGAM Project: https://sites.google.com/site/sshimizu06/lingam """ import numpy as np from scipy.stats import gamma from statsmodels.nonparametric import bandwidths __all__ = ['get_kernel_width', 'get_gram_matrix', 'hsic_teststat', 'hsic_test_gamma'] def get_...
[ "numpy.tile", "numpy.eye", "numpy.median", "scipy.stats.gamma.cdf", "numpy.ones", "statsmodels.nonparametric.bandwidths.bw_silverman", "numpy.diag", "numpy.exp", "numpy.sum", "numpy.dot", "numpy.tril", "statsmodels.nonparametric.bandwidths.bw_scott" ]
[((995, 1021), 'numpy.tile', 'np.tile', (['G', '(1, n_samples)'], {}), '(G, (1, n_samples))\n', (1002, 1021), True, 'import numpy as np\n'), ((1030, 1058), 'numpy.tile', 'np.tile', (['G.T', '(n_samples, 1)'], {}), '(G.T, (n_samples, 1))\n', (1037, 1058), True, 'import numpy as np\n'), ((1499, 1527), 'numpy.tile', 'np.t...
from __future__ import print_function import sys import numpy import pytest import struct from stl import mesh _STL_FILE = ''' solid test.stl facet normal -0.014565 0.073223 -0.002897 outer loop vertex 0.399344 0.461940 1.044090 vertex 0.500000 0.500000 1.500000 vertex 0.576120 0.500000 1.117320 endlo...
[ "struct.pack", "numpy.array", "numpy.zeros", "pytest.raises", "stl.mesh.Mesh" ]
[((3715, 3752), 'numpy.zeros', 'numpy.zeros', (['(3)'], {'dtype': 'mesh.Mesh.dtype'}), '(3, dtype=mesh.Mesh.dtype)\n', (3726, 3752), False, 'import numpy\n'), ((3778, 3826), 'numpy.array', 'numpy.array', (['[[0, 0, 0], [1, 0, 0], [0, 1, 1.0]]'], {}), '([[0, 0, 0], [1, 0, 0], [0, 1, 1.0]])\n', (3789, 3826), False, 'impo...
from mri_modules.utils import * import os import numpy as np import cv2 import shutil from skimage.measure import marching_cubes_lewiner as marching_cubes import stl from stl import mesh import tensorflow as tf from tensorflow.keras.models import load_model import skimage.transform import nibabel as nib imp...
[ "tensorflow.keras.layers.Conv3D", "scipy.ndimage.measurements.label", "numpy.isin", "skimage.measure.marching_cubes_lewiner", "numpy.count_nonzero", "tensorflow.keras.layers.UpSampling3D", "tensorflow.keras.models.load_model", "numpy.rot90", "scipy.ndimage.gaussian_filter", "scipy.ndimage.interpol...
[((19163, 19174), 'time.time', 'time.time', ([], {}), '()\n', (19172, 19174), False, 'import time\n'), ((827, 872), 'scipy.ndimage.generate_binary_structure', 'scipy.ndimage.generate_binary_structure', (['(3)', '(1)'], {}), '(3, 1)\n', (866, 872), False, 'import scipy\n'), ((2353, 2415), 'scipy.ndimage.measurements.lab...
# coding=utf-8 # Copyright 2019 Google LLC # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to ...
[ "tensorflow.compat.v2.argmax", "tensorflow_probability.distributions.Categorical", "tensorflow.compat.v2.keras.optimizers.Adam", "tensorflow.compat.v2.equal", "tensorflow.compat.v2.nn.log_softmax", "valan.r2r.curriculum_env_config.get_default_curriculum_env_config", "valan.r2r.env_config.get_default_env...
[((1432, 1535), 'collections.namedtuple', 'collections.namedtuple', (['"""R2RDebugInfo"""', "['episode_undisc_reward', 'episode_num_steps', 'num_paths']"], {}), "('R2RDebugInfo', ['episode_undisc_reward',\n 'episode_num_steps', 'num_paths'])\n", (1454, 1535), False, 'import collections\n'), ((4123, 4176), 'tensorflo...
''' MIT License Copyright 2019 Oak Ridge National Laboratory Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, mer...
[ "faro.FaceGallery.SearchableGalleryWorker", "faro.proto.face_service_pb2.FaceServiceInfo", "os.path.join", "pyvision.CenteredRect", "numpy.zeros", "insightface.model_zoo.get_model", "numpy.linalg.norm", "faro.proto.proto_types.image_pv2proto", "faro.proto.proto_types.vector_np2proto", "faro.proto....
[((1442, 1487), 'faro.FaceGallery.SearchableGalleryWorker', 'SearchableGalleryWorker', (['options', 'fsd.NEG_DOT'], {}), '(options, fsd.NEG_DOT)\n', (1465, 1487), False, 'from faro.FaceGallery import SearchableGalleryWorker\n'), ((1847, 1909), 'insightface.model_zoo.get_model', 'insightface.model_zoo.get_model', (['"""...
import numpy as np import copy def update_income(behavioral_effect, calcY): delta_inc = np.where(calcY.c00100 > 0, behavioral_effect, 0) # Attribute the behavioral effects across itemized deductions, # wages, and other income. _itemized = np.where(calcY.c04470 < calcY._standard, ...
[ "numpy.where", "copy.deepcopy" ]
[((94, 142), 'numpy.where', 'np.where', (['(calcY.c00100 > 0)', 'behavioral_effect', '(0)'], {}), '(calcY.c00100 > 0, behavioral_effect, 0)\n', (102, 142), True, 'import numpy as np\n'), ((259, 316), 'numpy.where', 'np.where', (['(calcY.c04470 < calcY._standard)', '(0)', 'calcY.c04470'], {}), '(calcY.c04470 < calcY._st...
import numpy as np import sacrebleu import torch from torch import nn, optim from tqdm import tqdm from src.modules import make_baseline_model, make_ps_model class ModelManager: """ Manages PyTorch nn.Module instance - Train Loop - Evaluate Loop - TODO: early stopping, better logging...
[ "torch.manual_seed", "torch.load", "torch.nn.NLLLoss", "numpy.random.seed", "torch.save", "torch.no_grad" ]
[((3998, 4031), 'torch.save', 'torch.save', (['checkpoint', 'self.path'], {}), '(checkpoint, self.path)\n', (4008, 4031), False, 'import torch\n'), ((4085, 4106), 'torch.load', 'torch.load', (['self.path'], {}), '(self.path)\n', (4095, 4106), False, 'import torch\n'), ((4339, 4360), 'numpy.random.seed', 'np.random.seed...
import base64 import logging import operator import numpy as np from api.v1alpha1.grpc_proto.grpc_algorithm.python3 import api_pb2 logger = logging.getLogger(__name__) class Parameter: def __init__(self, name, space_list): self.name = name self.space_list = space_list self.space_list.so...
[ "logging.getLogger", "operator.attrgetter", "api.v1alpha1.grpc_proto.grpc_algorithm.python3.api_pb2.KeyValue", "numpy.random.randint", "api.v1alpha1.grpc_proto.grpc_algorithm.python3.api_pb2.ParameterAssignments" ]
[((143, 170), 'logging.getLogger', 'logging.getLogger', (['__name__'], {}), '(__name__)\n', (160, 170), False, 'import logging\n'), ((570, 596), 'operator.attrgetter', 'operator.attrgetter', (['"""key"""'], {}), "('key')\n", (589, 596), False, 'import operator\n'), ((1170, 1197), 'operator.attrgetter', 'operator.attrge...
"""Makes event-attribution schematics for 2019 tornado-prediction paper.""" import numpy import pandas import matplotlib matplotlib.use('agg') import matplotlib.pyplot as pyplot from descartes import PolygonPatch from gewittergefahr.gg_utils import storm_tracking_utils as tracking_utils from gewittergefahr.gg_utils im...
[ "numpy.sqrt", "numpy.array", "numpy.mean", "numpy.where", "pandas.DataFrame.from_dict", "numpy.max", "matplotlib.pyplot.close", "gewittergefahr.plotting.imagemagick_utils.concatenate_images", "numpy.min", "gewittergefahr.gg_utils.polygons.vertex_arrays_to_polygon_object", "numpy.round", "matpl...
[((122, 143), 'matplotlib.use', 'matplotlib.use', (['"""agg"""'], {}), "('agg')\n", (136, 143), False, 'import matplotlib\n'), ((875, 919), 'numpy.array', 'numpy.array', (['[-1, 1, 1, -1, -1]'], {'dtype': 'float'}), '([-1, 1, 1, -1, -1], dtype=float)\n', (886, 919), False, 'import numpy\n'), ((1038, 1102), 'numpy.array...
from sklearn.neighbors import KernelDensity from scipy import signal import networkx as nx import numpy as np def ClusterPeak(List,sd): sd = max(10,sd) x=np.array(sorted(List)) y=[[i] for i in x] kde = KernelDensity(kernel='gaussian', bandwidth=min(sd/2,100)).fit(y) log_density = kde.score_samples(y) ...
[ "numpy.median", "networkx.connected_component_subgraphs", "numpy.linalg.pinv", "numpy.ones", "numpy.delete", "networkx.Graph", "numpy.exp", "numpy.array", "numpy.dot", "scipy.signal.find_peaks", "numpy.percentile" ]
[((334, 353), 'numpy.exp', 'np.exp', (['log_density'], {}), '(log_density)\n', (340, 353), True, 'import numpy as np\n'), ((369, 411), 'scipy.signal.find_peaks', 'signal.find_peaks', (['est_density'], {'distance': '(3)'}), '(est_density, distance=3)\n', (386, 411), False, 'from scipy import signal\n'), ((1692, 1702), '...
import numpy as np X = np.array(([2, 9], [1, 5], [3, 6]), dtype=float) y = np.array(([92], [86], [89]), dtype=float) X = X/np.amax(X,axis=0) # maximum of X array longitudinally y = y/100 #Sigmoid Function def sigmoid (x): return 1/(1 + np.exp(-x)) #Derivative of Sigmoid Function def derivatives_sigmoid(x)...
[ "numpy.exp", "numpy.array", "numpy.dot", "numpy.random.uniform", "numpy.amax" ]
[((24, 71), 'numpy.array', 'np.array', (['([2, 9], [1, 5], [3, 6])'], {'dtype': 'float'}), '(([2, 9], [1, 5], [3, 6]), dtype=float)\n', (32, 71), True, 'import numpy as np\n'), ((77, 118), 'numpy.array', 'np.array', (['([92], [86], [89])'], {'dtype': 'float'}), '(([92], [86], [89]), dtype=float)\n', (85, 118), True, 'i...
import torch import sys import os import numpy as np from abc import ABC from transformers import BertTokenizer import transformers from typing import List sys.path.append(os.path.join('..', 'stel')) from set_for_global import set_global_seed, set_torch_device, set_logging, EVAL_BATCH_SIZE BERT_MAX_WORDS = 250 # OPT...
[ "transformers.RobertaTokenizer.from_pretrained", "numpy.array", "torch.nn.functional.softmax", "transformers.BertForNextSentencePrediction.from_pretrained", "transformers.BertModel.from_pretrained", "set_for_global.set_global_seed", "set_for_global.set_torch_device", "transformers.PreTrainedModel.from...
[((447, 460), 'set_for_global.set_logging', 'set_logging', ([], {}), '()\n', (458, 460), False, 'from set_for_global import set_global_seed, set_torch_device, set_logging, EVAL_BATCH_SIZE\n'), ((461, 502), 'transformers.logging.set_verbosity_info', 'transformers.logging.set_verbosity_info', ([], {}), '()\n', (500, 502)...
import pytest import warnings warnings.filterwarnings('ignore') @pytest.mark.basic def test_resize_ratio(): """ Testing the resize_ratio function Returns: Nothing """ import numpy as np from deep_utils import resize_ratio dummy_images = [np.random.randint(0, 255, (1200, 900, 3), dtype=np....
[ "numpy.random.randint", "deep_utils.resize_ratio", "warnings.filterwarnings" ]
[((31, 64), 'warnings.filterwarnings', 'warnings.filterwarnings', (['"""ignore"""'], {}), "('ignore')\n", (54, 64), False, 'import warnings\n'), ((269, 326), 'numpy.random.randint', 'np.random.randint', (['(0)', '(255)', '(1200, 900, 3)'], {'dtype': 'np.uint8'}), '(0, 255, (1200, 900, 3), dtype=np.uint8)\n', (286, 326)...
import os import numpy as np from azureml.monitoring import ModelDataCollector from inference_schema.parameter_types.numpy_parameter_type import NumpyParameterType from inference_schema.schema_decorators import input_schema, output_schema # sklearn.externals.joblib is removed in 0.23 from sklearn import __version__ as...
[ "os.getenv", "azureml.monitoring.ModelDataCollector", "inference_schema.parameter_types.numpy_parameter_type.NumpyParameterType", "numpy.array", "packaging.version.Version", "joblib.load" ]
[((1350, 1383), 'numpy.array', 'np.array', (['[[30, -85, 21, 150, 6]]'], {}), '([[30, -85, 21, 150, 6]])\n', (1358, 1383), True, 'import numpy as np\n'), ((1400, 1417), 'numpy.array', 'np.array', (['[8.995]'], {}), '([8.995])\n', (1408, 1417), True, 'import numpy as np\n'), ((373, 392), 'packaging.version.Version', 'Ve...
#!/usr/bin/env python3 ######################################################################## # File: compareSampleSets.py # executable: # Purpose: # # # Author: <NAME> # History: cms 01/08/2020 Created # ######################################################################## ###################...
[ "numpy.mean", "argparse.ArgumentParser", "statsmodels.stats.multitest.multipletests", "numpy.isin", "numpy.isnan", "scipy.stats.ranksums", "sys.exit", "numpy.load" ]
[((1455, 1669), 'argparse.ArgumentParser', 'argparse.ArgumentParser', ([], {'description': '"""TBD"""', 'epilog': '"""Please feel free to forward any usage questions or concerns"""', 'add_help': '(True)', 'prefix_chars': '"""-"""', 'usage': '"""%(prog)s -m1 manifest1.txt -m2 manifest2.txt"""'}), "(description='TBD', ep...
import os import numpy as np import json import random import jieba import collections from tqdm import tqdm import config.args as args from util.Logginger import init_logger from pytorch_pretrained_bert.tokenization import BertTokenizer logger = init_logger("QA", logging_path=args.log_path) with open('TC/pybert/io/P...
[ "jieba.lcut", "collections.namedtuple", "random.shuffle", "tqdm.tqdm", "os.path.join", "json.dumps", "random.seed", "util.Logginger.init_logger", "os.path.isfile", "pytorch_pretrained_bert.tokenization.BertTokenizer", "numpy.zeros", "json.load", "numpy.load", "numpy.save" ]
[((248, 293), 'util.Logginger.init_logger', 'init_logger', (['"""QA"""'], {'logging_path': 'args.log_path'}), "('QA', logging_path=args.log_path)\n", (259, 293), False, 'from util.Logginger import init_logger\n'), ((377, 389), 'json.load', 'json.load', (['f'], {}), '(f)\n', (386, 389), False, 'import json\n'), ((3120, ...
import optuna import json import numpy as np import argparse import os from optuna.visualization import plot_optimization_history, plot_param_importances parser = argparse.ArgumentParser() parser.add_argument("--study-name", help="Study name used during hyperparameter optimization", type=str, default=None) parser.add...
[ "os.makedirs", "argparse.ArgumentParser", "optuna.visualization.plot_param_importances", "json.dumps", "numpy.argsort", "optuna.visualization.plot_optimization_history", "optuna.create_study" ]
[((165, 190), 'argparse.ArgumentParser', 'argparse.ArgumentParser', ([], {}), '()\n', (188, 190), False, 'import argparse\n'), ((786, 824), 'os.makedirs', 'os.makedirs', (['output_dir'], {'exist_ok': '(True)'}), '(output_dir, exist_ok=True)\n', (797, 824), False, 'import os\n'), ((834, 950), 'optuna.create_study', 'opt...
import json import random from argparse import ArgumentParser from numpy.random import default_rng parser = ArgumentParser() parser.add_argument("--in_file", type=str, default="data/NewsQA.train.json",) parser.add_argument("--out_file_dev", type=str, default="dataNewsQA.sample.dev.json") parser.add_argument("...
[ "numpy.random.default_rng", "argparse.ArgumentParser", "random.seed" ]
[((114, 130), 'argparse.ArgumentParser', 'ArgumentParser', ([], {}), '()\n', (128, 130), False, 'from argparse import ArgumentParser\n'), ((994, 1011), 'random.seed', 'random.seed', (['seed'], {}), '(seed)\n', (1005, 1011), False, 'import random\n'), ((1023, 1036), 'numpy.random.default_rng', 'default_rng', ([], {}), '...
# This file is part of GridCal. # # GridCal is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by # the Free Software Foundation, either version 3 of the License, or # (at your option) any later version. # # GridCal is distributed in the hope that...
[ "scipy.sparse.linalg.spsolve", "numpy.eye", "numpy.linalg.solve", "numpy.abs", "numpy.ones", "matplotlib.pyplot.show", "numpy.conj", "numpy.where", "GridCal.Engine.FileOpen", "numpy.ix_", "pandas.set_option", "numpy.zeros", "numpy.dot", "matplotlib.pyplot.figure", "scipy.sparse.hstack", ...
[((2526, 2544), 'numpy.zeros', 'np.zeros', (['(npq, n)'], {}), '((npq, n))\n', (2534, 2544), True, 'import numpy as np\n'), ((2653, 2667), 'scipy.sparse.linalg.spsolve', 'spsolve', (['J', 'dS'], {}), '(J, dS)\n', (2660, 2667), False, 'from scipy.sparse.linalg import factorized, spsolve, inv\n'), ((2752, 2763), 'scipy.s...
import pandas as pd import numpy as np import matplotlib.pyplot as plt import seaborn as sns from sklearn.metrics import roc_auc_score, roc_curve, classification_report from xgboost import XGBClassifier from time import time idx = pd.IndexSlice # COMMAND ---------- # MAGIC %md General # COMMAND ---------- def coun...
[ "matplotlib.pyplot.grid", "matplotlib.pyplot.ylabel", "sklearn.metrics.classification_report", "sklearn.metrics.roc_auc_score", "sklearn.metrics.roc_curve", "numpy.row_stack", "numpy.random.RandomState", "numpy.arange", "pandas.to_datetime", "pandas.MultiIndex.from_product", "seaborn.color_palet...
[((10980, 10999), 'seaborn.color_palette', 'sns.color_palette', ([], {}), '()\n', (10997, 10999), True, 'import seaborn as sns\n'), ((1231, 1266), 'numpy.random.RandomState', 'np.random.RandomState', (['random_state'], {}), '(random_state)\n', (1252, 1266), True, 'import numpy as np\n'), ((5035, 5053), 'numpy.arange', ...
import numpy as np import unittest from monte_carlo_tree_search import Node, MCTS, ucb_score from game import Connect2Game class MCTSTests(unittest.TestCase): def test_mcts_from_root_with_equal_priors(self): class MockModel: def predict(self, board): # starting board is: ...
[ "game.Connect2Game", "numpy.array", "unittest.main", "monte_carlo_tree_search.MCTS", "monte_carlo_tree_search.Node", "monte_carlo_tree_search.ucb_score" ]
[((8109, 8124), 'unittest.main', 'unittest.main', ([], {}), '()\n', (8122, 8124), False, 'import unittest\n'), ((429, 443), 'game.Connect2Game', 'Connect2Game', ([], {}), '()\n', (441, 443), False, 'from game import Connect2Game\n'), ((527, 550), 'monte_carlo_tree_search.MCTS', 'MCTS', (['game', 'model', 'args'], {}), ...
#!/usr/bin/env python # -*- coding: utf-8 -*- """First simple sklearn classifier""" from __future__ import division # 1/2 == 0.5, as in Py3 from __future__ import absolute_import # avoid hiding global modules with locals from __future__ import print_function # force use of print("hello") from __future__ import unico...
[ "matplotlib.pyplot.ylabel", "sklearn.naive_bayes.BernoulliNB", "copy.copy", "sql_convenience.update_class", "nltk.corpus.stopwords.words", "argparse.ArgumentParser", "sklearn.feature_extraction.text.CountVectorizer", "numpy.where", "matplotlib.pyplot.xlabel", "matplotlib.pyplot.plot", "matplotli...
[((1507, 1575), 'sql_convenience.extract_classifications_and_tweets', 'sql_convenience.extract_classifications_and_tweets', (['validation_table'], {}), '(validation_table)\n', (1557, 1575), False, 'import sql_convenience\n'), ((2904, 3075), 'argparse.ArgumentParser', 'argparse.ArgumentParser', ([], {'description': '"""...
import os import time import cv2 import matplotlib.pyplot as plt import numpy as np import png import torch import torch.nn as nn import torch.optim as optim import torchvision from colormap.colors import Color, hex2rgb from sklearn.metrics import average_precision_score as ap_score from torch.utils.data import DataLo...
[ "torch.nn.ReLU", "torch.nn.CrossEntropyLoss", "sklearn.metrics.average_precision_score", "tqdm.tqdm", "dataset.FacadeDataset", "numpy.max", "torch.nn.Conv2d", "numpy.zeros", "torch.cuda.is_available", "colormap.colors.hex2rgb", "numpy.concatenate", "torch.utils.data.DataLoader", "torch.no_gr...
[((1243, 1313), 'png.Writer', 'png.Writer', (['label.shape[1]', 'label.shape[0]'], {'palette': 'colors', 'bitdepth': '(4)'}), '(label.shape[1], label.shape[0], palette=colors, bitdepth=4)\n', (1253, 1313), False, 'import png\n'), ((1494, 1505), 'time.time', 'time.time', ([], {}), '()\n', (1503, 1505), False, 'import ti...
import importlib.util import logging import os import re import signal import sys class FrameworkError(Exception): pass def load_module(name, path): spec = importlib.util.spec_from_file_location(name, path) module = importlib.util.module_from_spec(spec) sys.modules[name] = module spec.loader.exe...
[ "logging.getLogger", "logging.basicConfig", "logging.StreamHandler", "amlb.utils.Namespace.walk", "re.compile", "amlb.utils.touch", "os.environ.get", "amlb.utils.Namespace.dict", "os.path.join", "numpy.save", "amlb.utils.json_dump", "sys.stdin.read", "numpy.load", "amlb.utils.kill_proc_tre...
[((369, 396), 'os.environ.get', 'os.environ.get', (['"""AMLB_PATH"""'], {}), "('AMLB_PATH')\n", (383, 396), False, 'import os\n'), ((795, 822), 'logging.getLogger', 'logging.getLogger', (['__name__'], {}), '(__name__)\n', (812, 822), False, 'import logging\n'), ((1511, 1543), 're.compile', 're.compile', (['"""^(X|y|dat...
#!/usr/bin/env python # coding: utf-8 from __future__ import division from __future__ import print_function from __future__ import absolute_import import torch import numpy as np import pandas as pd def to_one_hot(y, n_class=2): oh = np.zeros((y.shape[0], n_class), np.float32) oh[np.arange(y.shape[0]), y] = ...
[ "numpy.unique", "torch.from_numpy", "numpy.sum", "torch.is_tensor", "numpy.zeros", "numpy.arange" ]
[((241, 284), 'numpy.zeros', 'np.zeros', (['(y.shape[0], n_class)', 'np.float32'], {}), '((y.shape[0], n_class), np.float32)\n', (249, 284), True, 'import numpy as np\n'), ((848, 860), 'numpy.unique', 'np.unique', (['y'], {}), '(y)\n', (857, 860), True, 'import numpy as np\n'), ((465, 485), 'torch.is_tensor', 'torch.is...
# -*- coding: utf-8 -*- #################################################### # 作者: 刘朝阳 # 时间: 2020.05.01 # 更新时间: 2021.11.25 # 功能: 在计算PERCLOS时, 需要知道驾驶在正常情况下的眼睛开度, 来作为基准计算 # 使用说明: 自动调用, 无需操作 #################################################### import os import numpy as np import cv2 import dlib fro...
[ "numpy.mean", "os.listdir", "head_posture_estimation.head_posture_estimation", "dlib.shape_predictor", "os.path.join", "dlib.get_frontal_face_detector", "os.path.isdir", "cv2.cvtColor", "numpy.min", "imutils.face_utils.shape_to_np", "aspect_ratio_estimation.aspect_ratio_estimation", "cv2.imrea...
[((479, 504), 'head_posture_estimation.head_posture_estimation', 'head_posture_estimation', ([], {}), '()\n', (502, 504), False, 'from head_posture_estimation import head_posture_estimation\n'), ((512, 537), 'aspect_ratio_estimation.aspect_ratio_estimation', 'aspect_ratio_estimation', ([], {}), '()\n', (535, 537), Fals...
""" Creates a theano based gradient descent optimiser for finding good choices of weights to combine model predictions. """ import theano as th import theano.tensor as tt import numpy as np def compile_model_combination_weight_optimiser(lr_adjuster = lambda h, t: h): model_weights = tt.vector('w') # indexed over ...
[ "theano.tensor.exp", "theano.tensor.iscalar", "theano.function", "theano.gradient.jacobian", "theano.tensor.matrix", "theano.tensor.tensor3", "theano.tensor.vector", "theano.tensor.arange", "numpy.zeros", "theano.tensor.scalar", "theano.tensor.log", "numpy.random.RandomState" ]
[((290, 304), 'theano.tensor.vector', 'tt.vector', (['"""w"""'], {}), "('w')\n", (299, 304), True, 'import theano.tensor as tt\n'), ((347, 362), 'theano.tensor.tensor3', 'tt.tensor3', (['"""P"""'], {}), "('P')\n", (357, 362), True, 'import theano.tensor as tt\n'), ((428, 442), 'theano.tensor.matrix', 'tt.matrix', (['""...
""" Some basic inference functions adapted from my inferno module which should be available here soon: https://github.com/nealegibson/inferno Really they are just rewritten versions of https://github.com/nealegibson/Infer But there are many other options for optimisers/MCMCs/etc, and they should (in principle) all do m...
[ "numpy.sqrt", "numpy.random.rand", "numpy.array", "scipy.optimize.fmin", "numpy.where", "numpy.exp", "numpy.empty", "numpy.ones", "numpy.any", "numpy.std", "time.time", "matplotlib.pyplot.subplots_adjust", "numpy.copy", "numpy.diag", "numpy.sum", "numpy.random.randint", "matplotlib.p...
[((1305, 1316), 'numpy.copy', 'np.copy', (['x0'], {}), '(x0)\n', (1312, 1316), True, 'import numpy as np\n'), ((1684, 1731), 'scipy.optimize.fmin', 'fmin', (['wrapper', 'x0[var_ind]'], {'args': 'args'}), '(wrapper, x0[var_ind], args=args, **kwargs)\n', (1688, 1731), False, 'from scipy.optimize import fmin\n'), ((2403, ...
from pyomo.opt import SolverFactory, SolverStatus, TerminationCondition import pyomo.environ as en import os import numpy as np import logging logger = logging.getLogger(__name__) #################################################################### # Define some useful container objects to define the optimisation ob...
[ "logging.getLogger", "pyomo.environ.Objective", "os.environ.get", "pyomo.environ.Param", "logging.warning", "numpy.zeros", "pyomo.environ.Var", "pyomo.opt.SolverFactory", "pyomo.environ.RangeSet", "pyomo.environ.Constraint", "pyomo.environ.ConcreteModel" ]
[((153, 180), 'logging.getLogger', 'logging.getLogger', (['__name__'], {}), '(__name__)\n', (170, 180), False, 'import logging\n'), ((4342, 4360), 'pyomo.environ.ConcreteModel', 'en.ConcreteModel', ([], {}), '()\n', (4358, 4360), True, 'import pyomo.environ as en\n'), ((4501, 4545), 'pyomo.environ.RangeSet', 'en.RangeS...
"""Visualize convergence""" import numpy as np import pandas as pd import matplotlib.pyplot as plt import seaborn as sns from .test_functions import simple_nonconvex_function, ackley from .visualisation import FIGSIZE def max_distances(history, f): data = {'max_distance': max_distances} stats = pd.DataFrame(...
[ "seaborn.lmplot", "seaborn.set", "matplotlib.pyplot.gcf", "numpy.log", "numpy.array", "matplotlib.pyplot.figure", "matplotlib.pyplot.tight_layout", "numpy.concatenate", "pandas.DataFrame", "numpy.all", "numpy.arange", "matplotlib.pyplot.show" ]
[((307, 325), 'pandas.DataFrame', 'pd.DataFrame', (['data'], {}), '(data)\n', (319, 325), True, 'import pandas as pd\n'), ((401, 411), 'matplotlib.pyplot.show', 'plt.show', ([], {}), '()\n', (409, 411), True, 'import matplotlib.pyplot as plt\n'), ((472, 498), 'numpy.arange', 'np.arange', (['(-10)', '(10)', '(0.0001)'],...
import numpy as np from numpy import linalg as LA from sklearn.decomposition import PCA from utils import pulse_helper np.set_printoptions(suppress=True) if __name__ == '__main__': TEN_BITS_ADC_VALUE = 1023 pedestal = 0 dimension = 7 number_of_data = 20 qtd_for_training = 10 qtd_for_testing =...
[ "numpy.linalg.eig", "sklearn.decomposition.PCA", "numpy.random.random", "numpy.asmatrix", "utils.pulse_helper.get_jitter_pulse", "numpy.diag", "numpy.zeros", "numpy.matrix", "numpy.transpose", "numpy.random.randn", "numpy.var", "numpy.set_printoptions" ]
[((121, 155), 'numpy.set_printoptions', 'np.set_printoptions', ([], {'suppress': '(True)'}), '(suppress=True)\n', (140, 155), True, 'import numpy as np\n'), ((574, 1451), 'numpy.matrix', 'np.matrix', (['[[-0.8756796, -0.9904594, 0.0763564, 0.2866689, -0.8491597, -2.6331943, \n 0.4875299], [0.5691059, 1.0500695, 0.20...
#!/usr/bin/env python3 # -*- coding: utf-8 -*- """ Created on Tue May 18 14:42:02 2020 @author: figueroa """ import sys import numpy as np import warnings from sklearn.gaussian_process import GaussianProcessRegressor from sklearn.gaussian_process.kernels import RBF, WhiteKernel, ConstantKernel as C from scipy import l...
[ "scipy.linalg.cholesky", "numpy.array", "sklearn.gaussian_process.kernels.WhiteKernel", "numpy.save", "numpy.arange", "sklearn.gaussian_process.GaussianProcessRegressor", "scipy.linalg.cho_solve", "numpy.mean", "sklearn.gaussian_process.kernels.ConstantKernel", "numpy.max", "numpy.exp", "numpy...
[((453, 469), 'numpy.random.seed', 'np.random.seed', ([], {}), '()\n', (467, 469), True, 'import numpy as np\n'), ((470, 503), 'warnings.filterwarnings', 'warnings.filterwarnings', (['"""ignore"""'], {}), "('ignore')\n", (493, 503), False, 'import warnings\n'), ((1289, 1376), 'sklearn.gaussian_process.GaussianProcessRe...
# Implementation based on tf.keras.callbacks.py and tf.keras.utils.generic_utils.py # https://github.com/tensorflow/tensorflow/blob/2b96f3662bd776e277f86997659e61046b56c315/tensorflow/python/keras/callbacks.py # https://github.com/tensorflow/tensorflow/blob/2b96f3662bd776e277f86997659e61046b56c315/tensorflow/python/ker...
[ "numpy.ceil", "numpy.log10", "numpy.floor", "copy.copy", "sys.stdout.isatty", "sys.stdout.flush", "time.time", "sys.stdout.write" ]
[((6671, 6682), 'time.time', 'time.time', ([], {}), '()\n', (6680, 6682), False, 'import time\n'), ((8688, 8699), 'time.time', 'time.time', ([], {}), '()\n', (8697, 8699), False, 'import time\n'), ((12602, 12613), 'time.time', 'time.time', ([], {}), '()\n', (12611, 12613), False, 'import time\n'), ((4286, 4301), 'copy....
#!/usr/bin/python ''' Distance calculation substitute for cosmolopy All formula used are from https://arxiv.org/pdf/astro-ph/9905116.pdf ''' import numpy as np from scipy.integrate import quad class cosmo_distance(object): def __init__(self, **cosmology): ''' To initiate, cosmological parameters ...
[ "numpy.abs", "numpy.size", "numpy.sqrt", "numpy.atleast_1d" ]
[((1724, 1801), 'numpy.sqrt', 'np.sqrt', (['(self.om0 * (1.0 + z) ** 3.0 + self.ok0 * (1.0 + z) ** 2.0 + self.ode)'], {}), '(self.om0 * (1.0 + z) ** 3.0 + self.ok0 * (1.0 + z) ** 2.0 + self.ode)\n', (1731, 1801), True, 'import numpy as np\n'), ((2304, 2320), 'numpy.atleast_1d', 'np.atleast_1d', (['z'], {}), '(z)\n', (2...
import numpy as np import argparse import logging import time SUFFIX = '_shuffle.txt' def load_input(filename): t = time.time() with open(filename) as f: data = f.readlines() logging.info('load %d lines in %.4f s', len(data), time.time() - t) t = time.time() np.random.shuffle(data) lo...
[ "logging.basicConfig", "time.time", "argparse.ArgumentParser", "numpy.random.shuffle" ]
[((123, 134), 'time.time', 'time.time', ([], {}), '()\n', (132, 134), False, 'import time\n'), ((274, 285), 'time.time', 'time.time', ([], {}), '()\n', (283, 285), False, 'import time\n'), ((290, 313), 'numpy.random.shuffle', 'np.random.shuffle', (['data'], {}), '(data)\n', (307, 313), True, 'import numpy as np\n'), ((...
from __future__ import division import pandas as pd import numpy as np import matplotlib.pyplot as plt import time import nupic from nupic.encoders import RandomDistributedScalarEncoder from nupic.encoders.date import DateEncoder from nupic.algorithms.spatial_pooler import SpatialPooler from nupic.algorithms.temporal...
[ "numpy.concatenate" ]
[((835, 861), 'numpy.concatenate', 'np.concatenate', (['[res, enc]'], {}), '([res, enc])\n', (849, 861), True, 'import numpy as np\n')]
import os import argparse import torch import random import numpy as np from shutil import copyfile from src.config import Config from src.grad_match import GradientMatch, GradientMatch2 from src.create_data_list import create_data_list def load_config(mode = None): parser = argparse.ArgumentParser() parser.ad...
[ "torch.cuda.manual_seed_all", "torch.manual_seed", "os.path.exists", "src.grad_match.GradientMatch", "src.create_data_list.create_data_list", "argparse.ArgumentParser", "os.makedirs", "src.config.Config", "os.path.join", "random.seed", "shutil.copyfile", "torch.cuda.is_available", "numpy.ran...
[((281, 306), 'argparse.ArgumentParser', 'argparse.ArgumentParser', ([], {}), '()\n', (304, 306), False, 'import argparse\n'), ((927, 1026), 'src.create_data_list.create_data_list', 'create_data_list', (['args.train_img_path', 'args.test_img_path', 'args.eval_img_path', '"""./list_folder"""'], {}), "(args.train_img_pat...
""" Copyright Declaration (C) From: https://github.com/leeykang/ Use and modification of information, comment(s) or code provided in this document is granted if and only if this copyright declaration, located between lines 1 to 9 of this document, is preserved at the top of any document where such information, co...
[ "numpy.ones_like", "scipy.stats.poisson.pmf", "numpy.abs", "os.path.join", "matplotlib.pyplot.close", "scipy.stats.poisson.cdf", "numpy.zeros", "matplotlib.pyplot.figure", "numpy.array_equal", "multiprocessing.Pool", "copy.deepcopy", "os.path.abspath", "numpy.maximum", "numpy.zeros_like", ...
[((4138, 4193), 'numpy.zeros', 'np.zeros', (['(self.num_locations, self.num_locations)', 'int'], {}), '((self.num_locations, self.num_locations), int)\n', (4146, 4193), True, 'import numpy as np\n'), ((4227, 4282), 'numpy.zeros', 'np.zeros', (['(self.num_locations, self.num_locations)', 'int'], {}), '((self.num_locatio...
# -*- coding: utf-8 -*- # Author: <NAME> <<EMAIL>> import pickle import os import pytest import numpy as np from renormalizer.model import MolList, MolList2, ModelTranslator, Mol, Phonon from renormalizer.mps import Mpo, Mps from renormalizer.tests.parameter import mol_list, ph_phys_dim, omega_quantities from renorm...
[ "renormalizer.tests.parameter_PBI.construct_mol", "renormalizer.mps.Mps.random", "renormalizer.tests.parameter.mol_list.switch_scheme", "renormalizer.mps.Mpo", "numpy.array", "renormalizer.mps.Mpo.exact_propagator", "renormalizer.mps.Mps.gs", "renormalizer.mps.Mpo.onsite", "numpy.linalg.eigh", "nu...
[((398, 477), 'pytest.mark.parametrize', 'pytest.mark.parametrize', (['"""dt, space, shift"""', "([30, 'GS', 0.0], [30, 'EX', 0.0])"], {}), "('dt, space, shift', ([30, 'GS', 0.0], [30, 'EX', 0.0]))\n", (421, 477), False, 'import pytest\n'), ((777, 824), 'pytest.mark.parametrize', 'pytest.mark.parametrize', (['"""scheme...
# @<NAME>, SRA 2019 # This Foolbox module has been modified to reflect our "augmented" # projection algorithm # Please replace the "iterative_projected_gradient.py" file under # foolbox Python library directory from __future__ import division import numpy as np from abc import abstractmethod import logging import warn...
[ "numpy.clip", "logging.getLogger", "pandas.read_csv", "numpy.array", "os.listdir", "matplotlib.pyplot.plot", "warnings.warn", "numpy.abs", "logging.warning", "numpy.square", "os.path.isfile", "numpy.sign", "matplotlib.pyplot.show", "numpy.copy", "math.ceil", "urllib.parse.urlparse", ...
[((1187, 1204), 'os.getenv', 'os.getenv', (['"""HOME"""'], {}), "('HOME')\n", (1196, 1204), False, 'import os\n'), ((2244, 2277), 'os.listdir', 'os.listdir', (['self.BASE_CRAWLED_DIR'], {}), '(self.BASE_CRAWLED_DIR)\n', (2254, 2277), False, 'import os\n'), ((4304, 4339), 'scipy.spatial.distance.cdist', 'distance.cdist'...
''' Tests for API Utilities. These are codes shared with other files in core. ''' from scisheets.core import helpers_test as ht import mysite.settings as settings from CommonUtil.util import stripFileExtension from scisheets.core.helpers_test import TEST_DIR import api_util as api_util from extended_array import Exte...
[ "api_util.copyTableToFile", "os.path.exists", "api_util.readObjectFromFile", "os.path.join", "CommonUtil.util.stripFileExtension", "numpy.array", "api_util.writeObjectToFile", "scisheets.core.helpers_test.createTable", "unittest.main", "scisheets.core.helpers_test.setupTableInitialization", "api...
[((2638, 2653), 'unittest.main', 'unittest.main', ([], {}), '()\n', (2651, 2653), False, 'import unittest\n'), ((718, 751), 'scisheets.core.helpers_test.setupTableInitialization', 'ht.setupTableInitialization', (['self'], {}), '(self)\n', (745, 751), True, 'from scisheets.core import helpers_test as ht\n'), ((877, 897)...
import pandas as pd import os import numpy as np from matplotlib import pyplot as plt import torch import torch.nn as nn from torch.utils.data import DataLoader from model import LSTM from prepare_data import Data, Dataset stock = "MC.PA" input_size = 4 output_size = 1 nb_neurons = 200 learning_rate = 0.001 nb_epoc...
[ "numpy.mean", "os.listdir", "model.LSTM", "torch.load", "prepare_data.Data", "os.path.join", "matplotlib.pyplot.plot", "torch.nn.MSELoss", "torch.no_grad", "torch.zeros", "torch.utils.data.DataLoader", "prepare_data.Dataset", "matplotlib.pyplot.title", "torch.FloatTensor", "matplotlib.py...
[((905, 917), 'torch.nn.MSELoss', 'nn.MSELoss', ([], {}), '()\n', (915, 917), True, 'import torch.nn as nn\n'), ((1919, 1935), 'prepare_data.Data', 'Data', (['self.stock'], {}), '(self.stock)\n', (1923, 1935), False, 'from prepare_data import Data, Dataset\n'), ((2332, 2373), 'prepare_data.Dataset', 'Dataset', (['train...
import os import numpy as np import holoviews as hv import pandas as pd import logging from bokeh.models import HoverTool import holoviews as hv import datashader as ds from holoviews.operation.datashader import aggregate, datashade, dynspread import colorcet as cc import param import parambokeh from lsst.pipe.ta...
[ "datashader.mean", "param.ObjectSelector", "lsst.pipe.tasks.functors.PsfSdssTraceSizeDiff", "holoviews.operation.histogram", "numpy.isfinite", "holoviews.streams.RangeXY", "holoviews.Dimension", "lsst.pipe.tasks.functors.PsfHsmTraceSizeDiff", "os.listdir", "lsst.pipe.tasks.functors.RAColumn", "p...
[((670, 689), 'lsst.pipe.tasks.functors.Mag', 'Mag', (['"""base_PsfFlux"""'], {}), "('base_PsfFlux')\n", (673, 689), False, 'from lsst.pipe.tasks.functors import Mag, CustomFunctor, DeconvolvedMoments, StarGalaxyLabeller, RAColumn, DecColumn, Column, SdssTraceSize, PsfSdssTraceSizeDiff, HsmTraceSize, PsfHsmTraceSizeDif...
import logging import os from os.path import isfile, join import numpy as np from data_io import file_reading from data_io import x_y_spliting #import matplotlib.pyplot as plt def data_plot(data_file, class_column=0, delimiter=' '): x_matrix, attr_num = file_reading(data_file, delimiter, True) x_matrix, y_vect...
[ "numpy.unique", "numpy.where", "numpy.delete", "numpy.array", "data_io.x_y_spliting", "data_io.file_reading" ]
[((259, 299), 'data_io.file_reading', 'file_reading', (['data_file', 'delimiter', '(True)'], {}), '(data_file, delimiter, True)\n', (271, 299), False, 'from data_io import file_reading\n'), ((325, 361), 'data_io.x_y_spliting', 'x_y_spliting', (['x_matrix', 'class_column'], {}), '(x_matrix, class_column)\n', (337, 361),...
""" ------------------------------------- # -*- coding: utf-8 -*- # @Time : 2021/4/16 12:03:46 # @Author : Giyn # @Email : <EMAIL> # @File : mobility_model_construction.py # @Software: PyCharm ------------------------------------- """ import numpy as np from utils import ProgressBar def markov_model(trajs:...
[ "utils.ProgressBar", "numpy.zeros", "numpy.random.laplace" ]
[((613, 639), 'numpy.zeros', 'np.zeros', (['(n_grid, n_grid)'], {}), '((n_grid, n_grid))\n', (621, 639), True, 'import numpy as np\n'), ((1012, 1082), 'utils.ProgressBar', 'ProgressBar', (['n_grid', '"""Generate midpoint transition probability matrix"""'], {}), "(n_grid, 'Generate midpoint transition probability matrix...
# Copyright 2019 Xilinx Inc. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, ...
[ "sys.path.insert", "scipy.ndimage.filters.gaussian_filter", "math.sqrt", "numpy.array", "numpy.logical_and.reduce", "caffe.set_mode_cpu", "numpy.divide", "numpy.multiply", "argparse.ArgumentParser", "numpy.delete", "json.dumps", "numpy.subtract", "numpy.linspace", "numpy.vstack", "numpy....
[((977, 1002), 'argparse.ArgumentParser', 'argparse.ArgumentParser', ([], {}), '()\n', (1000, 1002), False, 'import argparse\n'), ((1764, 1798), 'os.path.join', 'os.path.join', (['args.caffe', '"""python"""'], {}), "(args.caffe, 'python')\n", (1776, 1798), False, 'import os\n'), ((2278, 2339), 'numpy.tile', 'np.tile', ...
import argparse import json import os from pprint import pprint import numpy as np from sklearn.metrics import precision_recall_fscore_support from a2t.topic_classification.mlm import MLMTopicClassifier from a2t.topic_classification.mnli import ( NLITopicClassifier, NLITopicClassifierWithMappingHead, ) from a...
[ "argparse.ArgumentParser", "os.makedirs", "json.dump", "numpy.argmax", "numpy.argsort", "numpy.array", "json.load", "pprint.pprint", "numpy.save" ]
[((711, 818), 'argparse.ArgumentParser', 'argparse.ArgumentParser', ([], {'prog': '"""run_evaluation"""', 'description': '"""Run a evaluation for each configuration."""'}), "(prog='run_evaluation', description=\n 'Run a evaluation for each configuration.')\n", (734, 818), False, 'import argparse\n'), ((1488, 1504), ...
''' Author: <NAME> ''' import numpy as np from qpsolvers import solve_qp def linear(x1,x2,p = None): return np.dot(x1,x2) def polynomial(x1,x2,d): return ( 1+np.dot(x1,x2) )**d def rbf(x1,x2,l): return np.exp( -np.divide(np.dot(x1-x2,x1-x2), 2*(l**2 ) ) ) def ND_hyperplane(x1,svecto...
[ "numpy.identity", "numpy.mean", "numpy.multiply", "numpy.ones", "qpsolvers.solve_qp", "numpy.where", "numpy.size", "numpy.asarray", "numpy.dot", "numpy.outer", "numpy.zeros", "numpy.empty", "numpy.sign" ]
[((122, 136), 'numpy.dot', 'np.dot', (['x1', 'x2'], {}), '(x1, x2)\n', (128, 136), True, 'import numpy as np\n'), ((1429, 1452), 'numpy.asarray', 'np.asarray', (['data[:, :2]'], {}), '(data[:, :2])\n', (1439, 1452), True, 'import numpy as np\n'), ((1471, 1494), 'numpy.asarray', 'np.asarray', (['data[:, 2:]'], {}), '(da...
# -*- coding: utf-8 -*- """ Created on Thu Dec 7 14:28:52 2017 @author: ning This script is to do two things, 1. converting epochs to power spectrograms 2. fit and test a linear model to the data """ import numpy as np from matplotlib import pyplot as plt import os import mne from glob import glob fr...
[ "sklearn.model_selection.StratifiedShuffleSplit", "numpy.sqrt", "numpy.array", "matplotlib.rc", "numpy.arange", "os.path.exists", "numpy.mean", "mne.decoding.LinearModel", "numpy.linspace", "mne.read_epochs", "numpy.concatenate", "mne.time_frequency.read_tfrs", "os.mkdir", "sklearn.preproc...
[((1132, 1174), 'os.chdir', 'os.chdir', (['"""D:/Ning - spindle/training set"""'], {}), "('D:/Ning - spindle/training set')\n", (1140, 1174), False, 'import os\n'), ((1888, 1910), 'numpy.concatenate', 'np.concatenate', (['labels'], {}), '(labels)\n', (1902, 1910), True, 'import numpy as np\n'), ((2591, 2619), 'numpy.co...
#!/usr/bin/env python # -*- coding: utf-8 -*- """objetos.py: Objetos e utilidades necessários para a implementação do algoritmo""" __copyright__ = "Copyright (c) 2021 <NAME> & <NAME>. MIT. See attached LICENSE.txt file" from math import sqrt from copy import deepcopy from sys import maxsize as int_inf from typing i...
[ "numpy.power", "dataclasses.dataclass", "copy.deepcopy", "pandas.DataFrame", "dataclasses.field" ]
[((655, 677), 'dataclasses.dataclass', 'dataclass', ([], {'frozen': '(True)'}), '(frozen=True)\n', (664, 677), False, 'from dataclasses import dataclass, field\n'), ((911, 933), 'dataclasses.dataclass', 'dataclass', ([], {'frozen': '(True)'}), '(frozen=True)\n', (920, 933), False, 'from dataclasses import dataclass, fi...
import argparse import os import time import datetime import yaml import tensorflow as tf import numpy as np import src.core as core from src.retina_net import config_utils from src.core import constants from src.retina_net.builders import dataset_handler_builder from src.retina_net.models.retinanet_model import Reti...
[ "tensorflow.data.experimental.cardinality", "yaml.load", "tensorflow.GradientTape", "src.retina_net.models.retinanet_model.RetinaNetModel", "tensorflow.cast", "tensorflow.clip_by_global_norm", "argparse.ArgumentParser", "src.retina_net.config_utils.setup", "tensorflow.concat", "src.core.model_dir"...
[((615, 677), 'src.retina_net.builders.dataset_handler_builder.build_dataset', 'dataset_handler_builder.build_dataset', (['dataset_config', '"""train"""'], {}), "(dataset_config, 'train')\n", (652, 677), False, 'from src.retina_net.builders import dataset_handler_builder\n'), ((1620, 1716), 'tensorflow.keras.optimizers...
import os import sys import json import random import numpy as np import torch from tqdm import tqdm, trange from scipy.sparse import coo_matrix from torch.utils.data import DataLoader, SequentialSampler, TensorDataset import blink.candidate_ranking.utils as utils from blink.common.params import BlinkParser from blin...
[ "torch.LongTensor", "blink.joint.joint_eval.evaluation.compute_linking_metrics", "os.path.exists", "blink.joint.joint_eval.evaluation._get_global_maximum_spanning_tree", "json.dumps", "numpy.random.seed", "scipy.sparse.coo_matrix", "blink.common.params.BlinkParser", "torch.utils.data.SequentialSampl...
[((986, 1013), 'torch.LongTensor', 'torch.LongTensor', (['mod_input'], {}), '(mod_input)\n', (1002, 1013), False, 'import torch\n'), ((1197, 1222), 'tqdm.trange', 'trange', (['contexts.shape[0]'], {}), '(contexts.shape[0])\n', (1203, 1222), False, 'from tqdm import tqdm, trange\n'), ((1663, 1696), 'torch.cat', 'torch.c...
import numpy as np from .. import Geometry, Line, LineSegmentMaterial class BoxHelper(Line): """A line box object. Commonly used to visualize bounding boxes. Parameters: size (float): The length of the box' edges (default 1). thickness (float): the thickness of the lines (default 1 px). ...
[ "numpy.array", "numpy.asarray" ]
[((420, 719), 'numpy.array', 'np.array', (['[[0, 0, 0], [1, 0, 0], [0, 0, 0], [0, 0, 1], [1, 0, 1], [1, 0, 0], [1, 0, 1\n ], [0, 0, 1], [0, 1, 0], [1, 1, 0], [0, 1, 0], [0, 1, 1], [1, 1, 1], [1,\n 1, 0], [1, 1, 1], [0, 1, 1], [0, 0, 0], [0, 1, 0], [1, 0, 0], [1, 1, 0],\n [0, 0, 1], [0, 1, 1], [1, 0, 1], [1, 1,...
import glob import numpy as np import pandas as pd import matplotlib.pyplot as plt def unison_shuffled_copies(a, b): assert len(a) == len(b) p = np.random.permutation(len(a)) return a[p], b[p] def plot_swing(swing_data, shot_type=None, dist=None): """ swing_data: Dx6 array of IMU data """ ...
[ "pandas.read_csv", "matplotlib.pyplot.plot", "numpy.argmax", "numpy.array", "matplotlib.pyplot.figure", "numpy.zeros", "matplotlib.pyplot.title", "matplotlib.pyplot.subplot", "matplotlib.pyplot.suptitle", "glob.glob" ]
[((377, 404), 'matplotlib.pyplot.figure', 'plt.figure', ([], {'figsize': '(15, 7)'}), '(figsize=(15, 7))\n', (387, 404), True, 'import matplotlib.pyplot as plt\n'), ((781, 806), 'glob.glob', 'glob.glob', (["(path + '*.csv')"], {}), "(path + '*.csv')\n", (790, 806), False, 'import glob\n'), ((1074, 1090), 'numpy.array',...
""" This script shows you how to select gripper for an environment. This is controlled by gripper_type keyword argument demo script: python3 examples/policy.py GQCNN-4.0-PJ --depth_image <depth.npy> --segmask <seg.png> --camera_intr data/calib/phoxi/phoxi.intr """ import numpy as np import math import cv2 import robo...
[ "cv2.imwrite", "ik_controller.robosuite_IKmover", "numpy.max", "numpy.array", "dexnet.DexNet", "robosuite.environments.SawyerLift_vj", "numpy.min", "mujoco_py.MjRenderContextOffscreen", "numpy.save" ]
[((2136, 2315), 'robosuite.environments.SawyerLift_vj', 'SawyerLift_vj', ([], {'ignore_done': '(True)', 'gripper_type': '"""TwoFingerGripper"""', 'use_camera_obs': '(False)', 'has_offscreen_renderer': '(False)', 'has_renderer': '(True)', 'camera_name': 'None', 'control_freq': '(100)'}), "(ignore_done=True, gripper_type...
# -*- coding: utf-8 -*- import numpy as np import pandas as pd def calculate_effect_of_credit_drop(model, X, credit_factors): probs = model.predict_proba(X)[:, 1] all_probs_changes = {} all_credit_amount_changes = {} all_expected_costs_in_credit = {} for factor in credit_factors: probs...
[ "numpy.divide", "numpy.where", "numpy.isnan", "pandas.DataFrame", "numpy.round" ]
[((5209, 5458), 'pandas.DataFrame', 'pd.DataFrame', (["{'defaulted': y, 'credit_given': X['credit_given'], 'prob': probs,\n 'factors': all_processed_factors, 'costs': all_processed_costs,\n 'credit_losses': all_processed_credit_changes, 'probs_changes':\n all_processed_probs_changes}"], {}), "({'defaulted': y,...
#!/usr/bin/env python # coding: utf-8 import numpy as np from tqdm import tqdm from functools import reduce import disk.funcs as dfn import h5py import os import glob import sys from matplotlib import pyplot as plt class binary_mbh(object): def __init__(self, filename): self.parse_file(filename) ...
[ "numpy.abs", "numpy.ones", "numpy.nanmedian", "numpy.where", "os.path.join", "numpy.diff", "h5py.File", "os.getcwd", "numpy.array", "numpy.zeros", "numpy.sum", "numpy.full", "numpy.nansum", "numpy.isinf", "disk.funcs.dm1dm2_lk" ]
[((1840, 1872), 'numpy.zeros', 'np.zeros', (['(self.sep.shape[0], 3)'], {}), '((self.sep.shape[0], 3))\n', (1848, 1872), True, 'import numpy as np\n'), ((2443, 2475), 'numpy.zeros', 'np.zeros', (['(self.sep.shape[0], 3)'], {}), '((self.sep.shape[0], 3))\n', (2451, 2475), True, 'import numpy as np\n'), ((3037, 3069), 'n...
import math import os import random import time import gc import dgl import dgl.function as fn import numpy as np import torch import torch.nn as nn import torch.nn.functional as F from sklearn.decomposition import PCA from dataset import load_dataset from utils import compute_spectral_emb, entropy def neighbor_ave...
[ "numpy.union1d", "dataset.load_dataset", "torch.LongTensor", "numpy.log", "torch.pow", "os.path.exists", "torch.cuda.device", "dgl.function.copy_src", "torch.zeros_like", "torch.argmax", "dgl.function.sum", "torch.ones_like", "os.path.dirname", "dgl.function.mean", "torch.nn.functional.o...
[((4853, 5007), 'os.path.join', 'os.path.join', (['""".."""', '"""embeddings"""', 'args.dataset', "(args.model if args.model != 'simple_sagn' else args.model + '_' + args.\n weight_style)", '"""smoothed_emb.pt"""'], {}), "('..', 'embeddings', args.dataset, args.model if args.model !=\n 'simple_sagn' else args.mod...
"""Get counterfactual prediction for 2000 US dollars tuition subsidy. Get counterfactual prediction for 2000 US dollars tuition subsidy for different parametrization of the model with hyperbolic discounting and choice restrictions based on Keane and Wolpin (1994) :cite:`KeaneWolpin1994`. Looking at the bivariate dist...
[ "bld.project_paths.project_paths_join", "respy.get_simulate_func", "src.library.housekeeping._temporary_working_directory", "numpy.linspace", "respy.get_example_model", "pandas.concat" ]
[((1260, 1290), 'numpy.linspace', 'np.linspace', (['(0)', '(99)', 'n_datasets'], {}), '(0, 99, n_datasets)\n', (1271, 1290), True, 'import numpy as np\n'), ((1307, 1342), 'numpy.linspace', 'np.linspace', (['(1000)', '(1099)', 'n_datasets'], {}), '(1000, 1099, n_datasets)\n', (1318, 1342), True, 'import numpy as np\n'),...
#Filename : plankton.py #written by <NAME> #on import csv import numpy as np from scipy import interpolate def reader(filename): """reader reads the .csv file and returns the data as list""" with open(filename, 'r') as fl: reader = csv.reader(fl, dialect = 'excel') data = list(reader) ...
[ "csv.reader", "scipy.interpolate.interp2d", "numpy.savetxt", "numpy.arctan" ]
[((1998, 2052), 'numpy.savetxt', 'np.savetxt', (['"""out.csv"""', 'output'], {'delimiter': '""","""', 'fmt': '"""%s"""'}), "('out.csv', output, delimiter=',', fmt='%s')\n", (2008, 2052), True, 'import numpy as np\n'), ((6268, 6311), 'scipy.interpolate.interp2d', 'interpolate.interp2d', (['x', 'y', 'z'], {'kind': '"""cu...
import numpy as np import pandas as pd import matplotlib.pyplot as plt from linear_regression import Linear_regression def Call_myLRmodel(data): # add ones column data.insert(0, 'Ones', 1) # set X (training data) and y (target variable) cols = data.shape[1] X = data.iloc[:,0:cols-1] y = data....
[ "pandas.read_csv", "numpy.array", "numpy.zeros", "pandas.DataFrame", "linear_regression.Linear_regression", "sklearn.linear_model.LinearRegression" ]
[((396, 414), 'numpy.array', 'np.array', (['X.values'], {}), '(X.values)\n', (404, 414), True, 'import numpy as np\n'), ((423, 441), 'numpy.array', 'np.array', (['y.values'], {}), '(y.values)\n', (431, 441), True, 'import numpy as np\n'), ((454, 477), 'numpy.zeros', 'np.zeros', (['[1, cols - 1]'], {}), '([1, cols - 1])...
""" This file does the calculatoin, it saves the files and deletes a file from the do list. This scripts loads ERA5 hourly atmospheric data and tries to close the AM budget. This is pyhton 3 """ import os import sys root_path= 'path_to_project' sys.path.append(root_path) import tools_AM_budget as M from tools_AM_b...
[ "matplotlib.pyplot.grid", "matplotlib.pyplot.ylabel", "tools_AM_budget.save_log_txt", "tools_AM_budget.json_load", "numpy.array", "tools_AM_budget.write_log", "numpy.sin", "sys.path.append", "xarray.merge", "matplotlib.pyplot.plot", "matplotlib.pyplot.ylim", "tools_AM_budget.json_save", "too...
[((249, 275), 'sys.path.append', 'sys.path.append', (['root_path'], {}), '(root_path)\n', (264, 275), False, 'import sys\n'), ((627, 638), 'time.time', 'time.time', ([], {}), '()\n', (636, 638), False, 'import time\n'), ((1018, 1050), 'tools_AM_budget.json_load', 'M.json_load', (['"""config"""', 'root_path'], {}), "('c...
import codecs import gzip import logging import numpy from ..layers.time_distributed_embedding import TimeDistributedEmbedding from .data_indexer import DataIndexer logger = logging.getLogger(__name__) # pylint: disable=invalid-name class PretrainedEmbeddings: @staticmethod def initialize_random_matrix(sh...
[ "logging.getLogger", "gzip.open", "numpy.asarray", "codecs.open", "numpy.random.RandomState" ]
[((177, 204), 'logging.getLogger', 'logging.getLogger', (['__name__'], {}), '(__name__)\n', (194, 204), False, 'import logging\n'), ((468, 498), 'numpy.random.RandomState', 'numpy.random.RandomState', (['seed'], {}), '(seed)\n', (492, 498), False, 'import numpy\n'), ((1926, 1962), 'gzip.open', 'gzip.open', (['embedding...
# Copyright (c) 2015, <NAME> # See LICENSE file for details: <https://github.com/moble/scri/blob/master/LICENSE> import math import numpy as np import quaternion import scri import spherical_functions as sf import warnings def modes_constructor(constructor_statement, data_functor, **kwargs): """WaveformModes obj...
[ "numpy.sqrt", "scipy.special.factorial", "numpy.log", "math.sqrt", "spherical_functions.Wigner3j", "numpy.array", "scri.SpinWeights.index", "spherical_functions.LM_index", "numpy.arange", "scri.sample_waveforms.fake_precessing_waveform", "scipy.interpolate.CubicSpline", "numpy.exp", "numpy.l...
[((1874, 2171), 'scri.WaveformModes', 'scri.WaveformModes', ([], {'t': 't', 'frame': 'frame', 'data': 'data', 'history': "['# Called from constant_waveform']", 'frameType': 'frameType', 'dataType': 'dataType', 'r_is_scaled_out': 'r_is_scaled_out', 'm_is_scaled_out': 'm_is_scaled_out', 'constructor_statement': 'construc...
#!/usr/bin/env python # -*- coding: utf-8 -*- " Location Head." import numpy as np import torch import torch.nn as nn import torch.nn.functional as F from torch.nn.init import kaiming_uniform, normal from alphastarmini.lib.hyper_parameters import Arch_Hyper_Parameters as AHP from alphastarmini.lib.hype...
[ "torch.nn.BatchNorm2d", "torch.multinomial", "torch.nn.Softmax", "torch.nn.ModuleList", "alphastarmini.lib.utils.get_location_mask", "torch.nn.Conv2d", "torch.randint", "numpy.array", "torch.tensor", "torch.nn.functional.relu", "torch.nn.Linear", "torch.zeros", "alphastarmini.lib.utils.actio...
[((14470, 14528), 'torch.randn', 'torch.randn', (['batch_size', 'AHP.autoregressive_embedding_size'], {}), '(batch_size, AHP.autoregressive_embedding_size)\n', (14481, 14528), False, 'import torch\n'), ((14658, 14728), 'torch.randint', 'torch.randint', ([], {'low': '(0)', 'high': 'SFS.available_actions', 'size': '(batc...
import unittest import numpy as np import tensorflow as tf import twodlearn as tdl class ConstrainedTest(unittest.TestCase): def test_positive_variable(self): with tf.Session().as_default(): test = tdl.constrained.PositiveVariableExp( initial_value=lambda: tf.ex...
[ "unittest.main", "numpy.testing.assert_almost_equal", "tensorflow.Session", "tensorflow.truncated_normal_initializer" ]
[((661, 676), 'unittest.main', 'unittest.main', ([], {}), '()\n', (674, 676), False, 'import unittest\n'), ((589, 627), 'numpy.testing.assert_almost_equal', 'np.testing.assert_almost_equal', (['x1', 'x2'], {}), '(x1, x2)\n', (619, 627), True, 'import numpy as np\n'), ((178, 190), 'tensorflow.Session', 'tf.Session', ([]...
import numpy as np import wave import struct def note( pitch, beat ): fs = 44000 amplitude = 30000 frequency = np.array( [ 261.6, 293.7, 329.6, 349.2, 392.0, 440.0, 493.9 ] ) num_samples = beat * fs t = np.linspace( 0, beat, num_samples, endpoint = False ) a = np.linspace( 0, 1, num_samples, endpoint = False ) ...
[ "wave.open", "numpy.size", "numpy.append", "numpy.array", "numpy.linspace", "numpy.cos" ]
[((115, 174), 'numpy.array', 'np.array', (['[261.6, 293.7, 329.6, 349.2, 392.0, 440.0, 493.9]'], {}), '([261.6, 293.7, 329.6, 349.2, 392.0, 440.0, 493.9])\n', (123, 174), True, 'import numpy as np\n'), ((209, 258), 'numpy.linspace', 'np.linspace', (['(0)', 'beat', 'num_samples'], {'endpoint': '(False)'}), '(0, beat, nu...
import sys import queue import random import time import copy import numpy as np from multiprocessing import Process,Queue file_path=sys.argv[1] termin_time=sys.argv[3] random_seed=sys.argv[5] start=time.time() random.seed(random_seed) f=open(file_path,encoding='utf-8') sentimentlist = [] for line in f: s = line...
[ "numpy.random.rand", "multiprocessing.Process", "queue.get", "random.seed", "random.random", "copy.deepcopy", "queue.PriorityQueue", "multiprocessing.Queue", "time.time", "random.randint", "numpy.random.shuffle" ]
[((200, 211), 'time.time', 'time.time', ([], {}), '()\n', (209, 211), False, 'import time\n'), ((212, 236), 'random.seed', 'random.seed', (['random_seed'], {}), '(random_seed)\n', (223, 236), False, 'import random\n'), ((58481, 58488), 'multiprocessing.Queue', 'Queue', ([], {}), '()\n', (58486, 58488), False, 'from mul...
import pandas as pd import os from PIL import Image import numpy as np from keras.callbacks import ModelCheckpoint, LearningRateScheduler, EarlyStopping, ReduceLROnPlateau, TensorBoard from keras import optimizers, losses, activations, models from keras.layers import Convolution2D, Dense, Input, Flatten, Dropout, MaxPo...
[ "pandas.read_csv", "keras.preprocessing.image.ImageDataGenerator", "numpy.array", "keras.layers.Dense", "numpy.mean", "numpy.max", "keras.models.Model", "keras.callbacks.EarlyStopping", "keras.backend.clear_session", "keras.layers.GlobalMaxPooling2D", "sklearn.model_selection.train_test_split", ...
[((1031, 1156), 'keras.preprocessing.image.ImageDataGenerator', 'ImageDataGenerator', ([], {'rotation_range': '(6)', 'width_shift_range': '(0.1)', 'height_shift_range': '(0.1)', 'horizontal_flip': '(True)', 'zoom_range': '(0.1)'}), '(rotation_range=6, width_shift_range=0.1,\n height_shift_range=0.1, horizontal_flip=...
""" What is denoising? Noise is modeled as samples from a certain distribution, it can be referred with the name of distribution it follows, for example, a Gaussian noise. Mode (noise_type and noise_params): - "gaussian", [standard deviation of the distribution]: Gaussian noise - "poisson", [peak value]: Poisson nois...
[ "nnimgproc.util.parameters.Parameters", "numpy.copy", "numpy.random.poisson", "numpy.random.normal" ]
[((784, 796), 'nnimgproc.util.parameters.Parameters', 'Parameters', ([], {}), '()\n', (794, 796), False, 'from nnimgproc.util.parameters import Parameters\n'), ((1087, 1099), 'numpy.copy', 'np.copy', (['img'], {}), '(img)\n', (1094, 1099), True, 'import numpy as np\n'), ((1348, 1377), 'numpy.random.poisson', 'np.random...
from nltk.tag import pos_tag import numpy as np import pandas as pd from transformers import TFGPT2LMHeadModel, GPT2Tokenizer from string import punctuation from os import path, listdir import pickle import copy from helper_functions import get_embeddings from nltk import word_tokenize #Model MODEL_ID_GPT2...
[ "transformers.GPT2Tokenizer.from_pretrained", "os.listdir", "pickle.dump", "helper_functions.get_embeddings", "pandas.read_csv", "nltk.word_tokenize", "os.path.join", "pickle.load", "numpy.squeeze", "numpy.array", "copy.deepcopy", "transformers.TFGPT2LMHeadModel.from_pretrained" ]
[((344, 448), 'transformers.TFGPT2LMHeadModel.from_pretrained', 'TFGPT2LMHeadModel.from_pretrained', (['MODEL_ID_GPT2'], {'output_hidden_states': '(True)', 'output_attentions': '(False)'}), '(MODEL_ID_GPT2, output_hidden_states=True,\n output_attentions=False)\n', (377, 448), False, 'from transformers import TFGPT2L...
# Copyright 2018 Amazon.com, Inc. or its affiliates. All Rights Reserved. # # Licensed under the Apache License, Version 2.0 (the "License"). You # may not use this file except in compliance with the License. A copy of # the License is located at # # http://aws.amazon.com/apache2.0/ # # or in the "license" file acc...
[ "logging.getLogger", "argparse.ArgumentParser", "numpy.arange", "sklearn.model_selection.train_test_split", "tensorflow.contrib.saved_model.save_keras_model", "tensorflow.logging.set_verbosity", "os.environ.get", "tensorflow.keras.optimizers.Adam", "numpy.zeros", "tensorflow.keras.callbacks.ModelC...
[((873, 915), 'tensorflow.logging.set_verbosity', 'tf.logging.set_verbosity', (['tf.logging.ERROR'], {}), '(tf.logging.ERROR)\n', (897, 915), True, 'import tensorflow as tf\n'), ((1006, 1043), 'os.system', 'os.system', (['"""mkdir /opt/ml/model/code"""'], {}), "('mkdir /opt/ml/model/code')\n", (1015, 1043), False, 'imp...
import os import gzip import logging import tempfile from pathlib import Path import h5py import numpy import sunpy.map from astropy import units as u from astropy.io import fits from astropy.time import Time from sunpy.util.exceptions import warn_user from sunkit_instruments.suvi._variables import ( COMPOSITE_M...
[ "astropy.io.fits.getheader", "logging.debug", "sunpy.util.exceptions.warn_user", "pathlib.Path", "gzip.open", "numpy.longlong", "numpy.float64", "h5py.File", "astropy.time.Time", "tempfile.gettempdir", "os.path.basename", "astropy.io.fits.open", "astropy.io.fits.Header.fromstring", "sunkit...
[((7669, 7714), 'astropy.io.fits.Header.fromstring', 'fits.Header.fromstring', (['hdr_str_new'], {'sep': '"""\n"""'}), "(hdr_str_new, sep='\\n')\n", (7691, 7714), False, 'from astropy.io import fits\n'), ((1689, 1713), 'astropy.io.fits.getheader', 'fits.getheader', (['filename'], {}), '(filename)\n', (1703, 1713), Fals...
from aide_design.shared.units import unit_registry as u from datetime import datetime, timedelta import pandas as pd import numpy as np import matplotlib.pyplot as plt import os from pathlib import Path def ftime(data_file_path, start, end=-1): """This function extracts the column of times from a ProCoDA data fil...
[ "numpy.insert", "pandas.read_csv", "numpy.average", "datetime.datetime.strptime", "numpy.size", "matplotlib.pyplot.plot", "os.path.join", "os.path.split", "numpy.append", "numpy.array", "matplotlib.pyplot.figure", "pandas.to_numeric", "numpy.vstack", "aide_design.shared.units.unit_registry...
[((1033, 1076), 'pandas.read_csv', 'pd.read_csv', (['data_file_path'], {'delimiter': '"""\t"""'}), "(data_file_path, delimiter='\\t')\n", (1044, 1076), True, 'import pandas as pd\n'), ((1149, 1185), 'pandas.to_numeric', 'pd.to_numeric', (['df.iloc[start:end, 0]'], {}), '(df.iloc[start:end, 0])\n', (1162, 1185), True, '...
from __future__ import annotations from typing import List, Tuple, Union import numpy as np # now just for the 2x2 mat or 1x2 vec class Matrix(): def __init__(self, arr: Union[List[float], np.ndarray], data_type: str = 'mat', row: int = 2, col: ...
[ "numpy.isclose", "numpy.linalg.det", "numpy.square", "numpy.array", "numpy.dot", "numpy.linalg.inv", "numpy.arctan2", "numpy.cos", "numpy.sin" ]
[((5993, 6017), 'numpy.linalg.det', 'np.linalg.det', (['self._val'], {}), '(self._val)\n', (6006, 6017), True, 'import numpy as np\n'), ((6200, 6224), 'numpy.linalg.inv', 'np.linalg.inv', (['self._val'], {}), '(self._val)\n', (6213, 6224), True, 'import numpy as np\n'), ((6809, 6853), 'numpy.arctan2', 'np.arctan2', (['...
# -*- coding: utf-8 -*- # OPTIMIZE: using caching improves speed significantly at the cost of memory. I # need to see which is preferable in higher-level tests. from functools import cached_property import numpy from numba import njit as numba_speedup class Lattice: """ This class is for 3D crystal lattices...
[ "numpy.arccos", "numba.njit", "numpy.array", "numpy.dot", "numpy.sum", "numpy.degrees" ]
[((1774, 1799), 'numba.njit', 'numba_speedup', ([], {'cache': '(True)'}), '(cache=True)\n', (1787, 1799), True, 'from numba import njit as numba_speedup\n'), ((3248, 3273), 'numba.njit', 'numba_speedup', ([], {'cache': '(True)'}), '(cache=True)\n', (3261, 3273), True, 'from numba import njit as numba_speedup\n'), ((112...
import sqlite3 from tqdm import tqdm import numpy as np import array import sys import math import os import multiprocessing import shutil import pandas as pd from scipy.signal import savgol_filter class Reload: def __init__(self, path_pri, path_tra, fold): self.path_pri = path_pri self.path_tra =...
[ "os.path.exists", "os.listdir", "sys.exit", "sqlite3.connect", "pandas.read_csv", "numpy.where", "tqdm.tqdm", "math.sqrt", "scipy.signal.savgol_filter", "shutil.rmtree", "numpy.argsort", "numpy.array", "os.chdir", "multiprocessing.Pool", "numpy.concatenate", "os.mkdir", "pandas.DataF...
[((10978, 11006), 'math.sqrt', 'math.sqrt', (['(energy / duration)'], {}), '(energy / duration)\n', (10987, 11006), False, 'import math\n'), ((11953, 12030), 'pandas.DataFrame', 'pd.DataFrame', (["{'time_pop1': Time[cls_KKM[0]], 'energy_pop1': Eny[cls_KKM[0]]}"], {}), "({'time_pop1': Time[cls_KKM[0]], 'energy_pop1': En...
#!/usr/bin/env python3 # coding: utf-8 #libraries import keras import tensorflow as tf from keras import backend as K import cv2 import os import numpy as np from keras.optimizers import Adam from keras.models import model_from_json, load_model from keras.layers import Input, Dense from keras.models import Model,Seque...
[ "keras.backend.shape", "keras.backend.sum", "keras.callbacks.TerminateOnNaN", "keras.backend.flatten", "keras.layers.Activation", "keras.layers.Dense", "numpy.reshape", "keras.backend.square", "numpy.random.seed", "keras.models.Model", "keras.callbacks.EarlyStopping", "keras.backend.exp", "g...
[((818, 850), 'keras.callbacks.TerminateOnNaN', 'keras.callbacks.TerminateOnNaN', ([], {}), '()\n', (848, 850), False, 'import keras\n'), ((860, 880), 'numpy.random.seed', 'np.random.seed', (['seed'], {}), '(seed)\n', (874, 880), True, 'import numpy as np\n'), ((1916, 1985), 'keras.callbacks.CSVLogger', 'CSVLogger', ([...
#! /usr/bin/env python from __future__ import absolute_import from pybedtools import BedTool import argparse import numpy as np parser = argparse.ArgumentParser( description=""" Given two or mote bed files, ``multiBedSumary.py`` computes the sum of overlapping intervals in every genomic region. The default outpu...
[ "pybedtools.BedTool", "numpy.array", "argparse.ArgumentParser" ]
[((139, 531), 'argparse.ArgumentParser', 'argparse.ArgumentParser', ([], {'description': '"""\n\nGiven two or mote bed files, ``multiBedSumary.py`` computes the sum of overlapping intervals in every genomic region. The default output of ``multiBedSumary.py`` (a compressed numpy array, .npz) can be used from various too...
""" Data handling for images and reflectance """ from gzopen import gzopen import logging import logging.config import yaml import copy as cp import re import ntpath import h5py import datetime import numpy as np import time import io import glob import pandas as pd import matplotlib.pyplot as plt class wafer(): ...
[ "logging.getLogger", "ntpath.basename", "pandas.read_csv", "numpy.average", "numpy.fft.rfft", "numpy.array", "numpy.linspace", "gzopen.gzopen", "numpy.savetxt", "copy.deepcopy", "io.StringIO", "time.time" ]
[((480, 506), 'logging.getLogger', 'logging.getLogger', (['"""Wafer"""'], {}), "('Wafer')\n", (497, 506), False, 'import logging\n'), ((772, 786), 'numpy.fft.rfft', 'np.fft.rfft', (['d'], {}), '(d)\n', (783, 786), True, 'import numpy as np\n'), ((1052, 1081), 'logging.getLogger', 'logging.getLogger', (['"""WaferLSA"""'...
""" ================================= Find Photodiode On and Off Events ================================= In this example, we use ``pd-parser`` to find photodiode events and align both the onset of the deflection and the cessation to to behavior. """ # Authors: <NAME> <<EMAIL>> # # License: BSD (3-clause) ###########...
[ "mne.utils._TempDir", "mne.create_info", "pd_parser.parse_pd._load_data", "pd_parser.add_pd_off_events", "pd_parser.simulate_pd_data", "numpy.random.random", "os.path.join", "mne.events_from_annotations", "numpy.array", "numpy.random.seed", "matplotlib.pyplot.subplots", "numpy.random.randn", ...
[((835, 845), 'mne.utils._TempDir', '_TempDir', ([], {}), '()\n', (843, 845), False, 'from mne.utils import _TempDir\n'), ((874, 892), 'numpy.random.seed', 'np.random.seed', (['(29)'], {}), '(29)\n', (888, 892), True, 'import numpy as np\n'), ((1099, 1200), 'pd_parser.simulate_pd_data', 'pd_parser.simulate_pd_data', ([...
import unittest import os import numpy as np from astropy import constants import lal import matplotlib.pyplot as plt import bilby from bilby.core import utils class TestConstants(unittest.TestCase): def test_speed_of_light(self): self.assertEqual(utils.speed_of_light, lal.C_SI) self.assertLess(...
[ "bilby.core.utils.get_sampling_frequency_and_duration_from_time_array", "bilby.core.utils.infer_args_from_method", "bilby.core.utils.reflect", "numpy.array", "bilby.core.utils.infft", "numpy.sin", "unittest.main", "os.remove", "numpy.random.random", "numpy.linspace", "numpy.random.normal", "nu...
[((12385, 12400), 'unittest.main', 'unittest.main', ([], {}), '()\n', (12398, 12400), False, 'import unittest\n'), ((1445, 1504), 'bilby.core.utils.create_time_series', 'utils.create_time_series', (['self.sampling_frequency', 'duration'], {}), '(self.sampling_frequency, duration)\n', (1469, 1504), False, 'from bilby.co...
import matplotlib.pyplot as plt import seaborn as sns import numpy as np import pandas as pd import scipy as sc import pickle import os from . import preprocess from scipy.sparse import vstack, csr_matrix, csc_matrix, lil_matrix from sklearn.metrics.pairwise import cosine_similarity from sklearn.preprocessing import no...
[ "pandas.Series", "numpy.sqrt", "numpy.union1d", "pandas.read_csv", "scipy.sparse.vstack", "numpy.where", "sklearn.metrics.pairwise.cosine_similarity", "numpy.argsort", "numpy.array", "numpy.dot", "numpy.zeros", "pandas.DataFrame", "scipy.sparse.csr_matrix" ]
[((8274, 8286), 'numpy.array', 'np.array', (['[]'], {}), '([])\n', (8282, 8286), True, 'import numpy as np\n'), ((8301, 8313), 'numpy.array', 'np.array', (['[]'], {}), '([])\n', (8309, 8313), True, 'import numpy as np\n'), ((12314, 12375), 'pandas.DataFrame', 'pd.DataFrame', (['dataset.target_playlists[:pred_matrix.sha...
import numpy as np from math import sin, cos, atan2, tan, sqrt, pi import matplotlib.pyplot as plt import time from bdsim.components import TransferBlock, FunctionBlock from bdsim.graphics import GraphicsBlock class MultiRotor(TransferBlock): """ :blockname:`MULTIROTOR` .. table:: :align: le...
[ "numpy.clip", "numpy.sqrt", "numpy.cross", "numpy.any", "math.cos", "numpy.array", "numpy.zeros", "numpy.linalg.inv", "numpy.linspace", "math.atan2", "numpy.sum", "matplotlib.pyplot.draw", "math.sin", "numpy.arange", "matplotlib.pyplot.show" ]
[((29901, 29935), 'numpy.sqrt', 'np.sqrt', (['((900 ** 2 + 700 ** 2) / 2)'], {}), '((900 ** 2 + 700 ** 2) / 2)\n', (29908, 29935), True, 'import numpy as np\n'), ((7082, 7109), 'numpy.zeros', 'np.zeros', (['(3, self.nrotors)'], {}), '((3, self.nrotors))\n', (7090, 7109), True, 'import numpy as np\n'), ((7130, 7155), 'n...