text stringlengths 185 73.3k | repo stringlengths 7 100 | path stringlengths 4 146 | language stringclasses 7
values | hash stringlengths 16 16 | score float64 7 8.5 | stars int64 0 237k |
|---|---|---|---|---|---|---|
# Combine the per-node evaluation results of the Bonn cohort into a single Excel file
#
# eval_bonn_left.py / eval_bonn_right.py write one file per node, with one row per modality
# combination and one column per training trial. This script concatenates those columns across nodes
# and adds the aggregations over trials... | soumbane/magmsforEZprediction | combine_bonn_cohort_results.py | .py | 0dcde53359959223 | 7.15 | 1 |
# Load the dataset with different modalities for EZ prediction for each node number
import os
import numpy as np
from scipy.io import loadmat # type: ignore
import torch
from torch.nn import functional as F
from torchmanager_core.typing import Any, Enum, Tuple
from torchmanager.data import Dataset
class EZMode(Enum... | soumbane/magmsforEZprediction | data/dataset_ez.py | .py | ab5b4fe6533440e7 | 7.15 | 1 |
import argparse, magnet, os, torch, torchmanager
from torchmanager_core import view
from typing import Union
from ezpred import DESCRIPTION
from .basic import Configs as _Configs
class Configs(_Configs):
"""
The testing configurations
Args:
batch_size (int): The number of batch size.
data... | soumbane/magmsforEZprediction | ezpred/configs/eval.py | .py | 3e9cefdeefffbf6a | 7.15 | 1 |
import argparse, magnet, os, torch, torchmanager
from torchmanager_core import view
from typing import Optional, Union
from ezpred import DESCRIPTION
from .basic import Configs as _Configs
class Configs(_Configs):
"""
The training configurations
Args:
batch_size (int): The number of batch size.
... | soumbane/magmsforEZprediction | ezpred/configs/train.py | .py | 70a636ae21fe9afc | 7.15 | 1 |
from magnet import Manager as _Manager
from torch.optim.optimizer import Optimizer as Optimizer
from torchmanager.callbacks import Frequency
from torchmanager.data import DataLoader, Dataset
from torchmanager.losses.loss import Loss
from torchmanager.metrics.metric import Metric
from torchmanager_core import errors, de... | soumbane/magmsforEZprediction | ezpred/managers.py | .py | da631c3c42e69802 | 7.15 | 1 |
from magnet.nn.fusion import Fusion
import torch
class MidConcat(Fusion):
"""
Fusion at the middle for encoders with multiple outputs
* extends: `Fusion`
"""
def forward(self, x_in: list[tuple[torch.Tensor, ...]]) -> list[tuple[torch.Tensor, ...]]:
return super().forward(x_in)
... | soumbane/magmsforEZprediction | ezpred/nn/fusion/fuse.py | .py | 091f1f741fbb2873 | 7.15 | 1 |
# Modality-Specific Feature Extractor (MSFE)
import torch
import torch.nn as nn
from enum import Enum
from typing import Optional, Union
from .pad import PaddingLast1D
# from pad import PaddingLast1D
class EZScale(Enum):
COURSE = "course"
FINE = "fine"
class ConvBlock(nn.Module):
r"""... | soumbane/magmsforEZprediction | ezpred/nn/msfe.py | .py | ee85f27c05392c3e | 7.15 | 1 |
# Shared Classification Head (SCH)
import torch
import torch.nn as nn
from typing import Union
class SCH(nn.Module):
r"""
Shared Classification Head
Args:
mlp_features: input features for the fully connected layer - this is the concatenation of all the feature maps obtained from the `shfe` course ... | soumbane/magmsforEZprediction | ezpred/nn/sch.py | .py | 6ee35aa9ee79d3bf | 7.15 | 1 |
# Build the modality-combination table of the additional cohort for reporting
#
# One row per sequence combination, in the publication layout:
#
# # T1w T2w FLAIR DWI DWIC Left_Hemis_Mean_BA Right_Hemis_Mean_BA
# 1 0 0 0 0 1 0.6797 0.6889
# 2 0 0 0 ... | soumbane/magmsforEZprediction | make_addcohort_combination_table.py | .py | f77e6ee867c29c01 | 7.15 | 1 |
# Build the modality-combination table of the Bonn cohort for reporting
#
# One row per sequence combination, in the same publication layout as the additional cohort:
#
# # Combo T1w T2w FLAIR DWI DWIC Left_Hemis_Mean_BA Right_Hemis_Mean_BA
# 1 4 0 0 1 0 0 ... ... | soumbane/magmsforEZprediction | make_bonncohort_combination_table.py | .py | 94a7d5dab2daddd9 | 7.15 | 1 |
# Build the joint AddCohort + BonnCohort combination table for the paper
#
# One row per sequence combination, 1-31, with both external cohorts side by side:
#
# # T1w T2w FLAIR DWI DWIC AddCohort_Left AddCohort_Right BonnCohort_Left BonnCohort_Right
# 1 0 0 0 0 1 0.6797 ... | soumbane/magmsforEZprediction | make_combined_cohort_table.py | .py | e2607f3d5173e6ed | 7.15 | 1 |
#!/usr/bin/env python3
"""
Generates files for the "Brawler" mod.
"""
import argparse
import os
from dataclasses import dataclass
from functools import cached_property
from moddb import multiply_resources
from modtools.gamedata import PassiveData
from modtools.lsx.game import (
ActionResource,
CharacterClass,... | justin-elliott/bg3 | Brawler.py | .py | 9db575b5de353a32 | 7 | 0 |
#!/usr/bin/env python3
"""
Generates files for the "ChildOfTheForest" mod.
"""
import os
from functools import cached_property
from modtools.gamedata import (
PassiveData,
)
from modtools.lsx.game import (
CharacterRace,
Progression,
)
from modtools.replacers import (
progression,
Replacer,
)
cl... | justin-elliott/bg3 | ChildOfTheForest.py | .py | c32bf5d0b00a0326 | 7 | 0 |
#!/usr/bin/env python3
"""
Generates files for the "ComfortableBoots" mod.
"""
import os
from modtools.gamedata import Armor
from modtools.lsx.game import GameObjects
from modtools.mod import Mod
from modtools.text import Text, TreasureTable
from uuid import UUID
class ItemCombinations(Text):
@property
def ... | justin-elliott/bg3 | ComfortableBoots.py | .py | b99979be2fb40b5d | 7 | 0 |
#!/usr/bin/env python3
import os
from moddb import Sorcery
from modtools.replacers import (
CharacterClass,
Replacer,
)
class CreateSorceryPoints(Replacer):
def __init__(self, **kwds: str):
super().__init__(os.path.join(os.path.dirname(__file__)),
author="justin-elliott"... | justin-elliott/bg3 | CreateSorceryPoints.py | .py | f4d25721fcc4ac0d | 7 | 0 |
#!/usr/bin/env python3
"""
Generates files for the "MonkExpanded" mod.
"""
import argparse
import os
from dataclasses import dataclass
from functools import cached_property
from moddb import (
Bolster,
Defense,
multiply_resources,
PackMule,
)
from modtools.gamedata import PassiveData
from modtools.lsx... | justin-elliott/bg3 | MonkExpanded.py | .py | 86d93264196c16ad | 7 | 0 |
#!/usr/bin/env python3
"""
Generates files for the "ProgressionsReplacer" mod.
"""
import os
from modtools.lsx.game import (
CharacterSubclasses,
Progression,
)
from modtools.replacers import (
DontIncludeProgression,
only_existing_progressions,
progression,
Replacer,
)
class ProgressionsRep... | justin-elliott/bg3 | ProgressionsReplacer.py | .py | 6ecb9247792244fc | 7 | 0 |
#!/usr/bin/env python3
"""confhistory: extract conference history database into text format."""
# Copyright 2023 Pexip AS
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.a... | pexip/pexip-log-tools | confhistory.py | .py | db01aca84a9f3d8a | 7.24 | 2 |
#!/usr/bin/env python3
"""connectivity: process admin logs for connectivity loss events."""
# Copyright 2023 Pexip AS
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apach... | pexip/pexip-log-tools | connectivity.py | .py | b405d488b244b355 | 7.24 | 2 |
#!/usr/bin/env python3
# Copyright 2025 Pexip AS
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or a... | pexip/pexip-log-tools | pexidpconfig.py | .py | 882f92ef9f64c3e9 | 7.24 | 2 |
#!/bin/bash
# Copyright 2023-2026 Airbus, CS Group
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or ... | RS-PYTHON/rs-client-libraries | .github/scripts/call_prefect.py | .py | 2ddde5d12897fd6a | 7.15 | 1 |
# Copyright 2023-2026 Airbus, CS Group
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in... | RS-PYTHON/rs-client-libraries | rs_client/osam_client.py | .py | 06fefb48dbb0cc0a | 7.15 | 1 |
# Copyright 2023-2026 Airbus, CS Group
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in... | RS-PYTHON/rs-client-libraries | rs_client/rs_client.py | .py | 12f5dab5d21869ca | 7.15 | 1 |
# Copyright 2023-2026 Airbus, CS Group
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in... | RS-PYTHON/rs-client-libraries | rs_client/stac/auxip_client.py | .py | cbb2de3974965a81 | 7.15 | 1 |
# Copyright 2023-2026 Airbus, CS Group
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in... | RS-PYTHON/rs-client-libraries | rs_client/stac/cadip_client.py | .py | bf0a5e3269bd5b84 | 7.15 | 1 |
# Copyright 2023-2026 Airbus, CS Group
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in... | RS-PYTHON/rs-client-libraries | rs_client/stac/cdse_client.py | .py | 7d41698b5cbd2866 | 7.15 | 1 |
# Copyright 2023-2026 Airbus, CS Group
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in... | RS-PYTHON/rs-client-libraries | rs_client/stac/earthdatahub_client.py | .py | 6bbe31a1621b57e4 | 7.15 | 1 |
# Copyright 2023-2026 Airbus, CS Group
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in... | RS-PYTHON/rs-client-libraries | rs_client/stac/prip_client.py | .py | 8e829460b43b74d2 | 7.15 | 1 |
# Copyright 2023-2026 Airbus, CS Group
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in... | RS-PYTHON/rs-client-libraries | rs_common/config.py | .py | 56f4e445df85bc84 | 7.15 | 1 |
# Copyright 2023-2026 Airbus, CS Group
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in... | RS-PYTHON/rs-client-libraries | rs_common/geometry_fix.py | .py | 7fd3b2155428902b | 7.15 | 1 |
# Copyright 2023-2026 Airbus, CS Group
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in... | RS-PYTHON/rs-client-libraries | rs_common/init_opentelemetry.py | .py | 39a4541597fb233c | 7.15 | 1 |
# Copyright 2023-2026 Airbus, CS Group
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in... | RS-PYTHON/rs-client-libraries | rs_common/logging.py | .py | 3e14a255b127b067 | 7.15 | 1 |
# Copyright 2023-2026 Airbus, CS Group
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in... | RS-PYTHON/rs-client-libraries | rs_common/utils.py | .py | 65604eed0c1219b1 | 7.15 | 1 |
#!/usr/bin/env python
# coding: utf8
#
# Vendored from the ESA EOPF Copernicus project (CPM ADF auxiliary-data-file):
# https://gitlab.eopf.copernicus.eu/cpm/adf-auxiliary-data-file/-/tree/main/scripts/
#
# Copyright 2022-2026 ESA
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use thi... | RS-PYTHON/rs-client-libraries | rs_workflows/adf_conversion/S00__ADF_ECMWA.py | .py | 92c1cc93dc03e6cf | 7.15 | 1 |
#!/usr/bin/env python
# coding: utf8
#
# Vendored from the ESA EOPF Copernicus project (CPM ADF auxiliary-data-file):
# https://gitlab.eopf.copernicus.eu/cpm/adf-auxiliary-data-file/-/tree/main/scripts/
#
# Copyright 2022-2026 ESA
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use thi... | RS-PYTHON/rs-client-libraries | rs_workflows/adf_conversion/S00__ADF_ECMWF.py | .py | 1eeb0aff6fe0b885 | 7.15 | 1 |
#!/usr/bin/env python
# coding: utf8
#
# Vendored from the ESA EOPF Copernicus project (CPM ADF auxiliary-data-file):
# https://gitlab.eopf.copernicus.eu/cpm/adf-auxiliary-data-file/-/tree/main/scripts/
#
# Copyright 2022-2026 ESA
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use thi... | RS-PYTHON/rs-client-libraries | rs_workflows/adf_conversion/S00__ADF_WATER.py | .py | 9efe1f27aa8164d6 | 7.15 | 1 |
# Vendored from the ESA EOPF Copernicus project (CPM ADF auxiliary-data-file):
# https://gitlab.eopf.copernicus.eu/cpm/adf-auxiliary-data-file/-/tree/main/scripts/cop_dem_utils
import os
import shutil
import cop_dem_utils as cdu
import dask
import numpy as np
class CopDemConverter:
@staticmethod
def reset_s... | RS-PYTHON/rs-client-libraries | rs_workflows/adf_conversion/cop_dem_utils/CopDemConverter.py | .py | 2f25e388422cd307 | 7.15 | 1 |
# Vendored from the ESA EOPF Copernicus project (CPM ADF auxiliary-data-file):
# https://gitlab.eopf.copernicus.eu/cpm/adf-auxiliary-data-file/-/tree/main/scripts/cop_dem_utils
class Progression:
"""Class to track the progression"""
def __init__(self, step_name, total):
self.step_name = step_name
... | RS-PYTHON/rs-client-libraries | rs_workflows/adf_conversion/cop_dem_utils/Progression.py | .py | 8668ab1e7bd3c659 | 7.15 | 1 |
# Vendored from the ESA EOPF Copernicus project (CPM ADF auxiliary-data-file):
# https://gitlab.eopf.copernicus.eu/cpm/adf-auxiliary-data-file/-/tree/main/scripts/cop_dem_utils
import os
import cop_dem_utils as cdu
import dask
from skimage.io import imread
class Tile:
def __init__(self, s3_config, s3_path, work... | RS-PYTHON/rs-client-libraries | rs_workflows/adf_conversion/cop_dem_utils/Tile.py | .py | a77d26eee182a899 | 7.15 | 1 |
# Copyright 2023-2026 Airbus, CS Group
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in... | RS-PYTHON/rs-client-libraries | rs_workflows/aux_flow.py | .py | 7dd53ef63522e062 | 7.15 | 1 |
# Copyright 2023-2026 Airbus, CS Group
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in... | RS-PYTHON/rs-client-libraries | rs_workflows/init_pi_db_flow.py | .py | b03e0d19d0a9d2bd | 7.15 | 1 |
# Copyright 2023-2026 Airbus, CS Group
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in... | RS-PYTHON/rs-client-libraries | rs_workflows/on_demand/adf/convert_adf_set.py | .py | cdfda613780b6542 | 7.15 | 1 |
import shutil
import typing
import os
import pathlib
import tarfile
from .chiral import ChiralClient
from .ftp import ftp_connect
def require_project(func):
def wrapper_func(self, *args, **kwargs) -> typing.Any:
if not self.project:
raise Exception(f'project is required for JobManager')
... | chiral-data/chiral-client-python | chiral_client/client.py | .py | 5ef6f4fe0faf04e7 | 7.15 | 1 |
"""
Tests for Chiral Python SDK using UserCommunicate API.
"""
import os
from chiral_client import AppKind, ChiralClient
def create_client() -> ChiralClient:
"""Create a ChiralClient from environment variables."""
user_email = os.environ["CHIRAL_USER_EMAIL"]
token_auth = os.environ["CHIRAL_TOKEN_API"]
... | chiral-data/chiral-client-python | tests.py | .py | f4025118e1784349 | 7.65 | 1 |
from typing import Tuple, List
def min_cost_nk(ind: int, cost: List[int], k: int) -> Tuple[int, List[int]]:
"""
Calculate minimum cost to reach index using brute force recursion.
Args:
ind: Target index to reach
cost: List of costs for each platform
k: Maximum jump d... | devYRPauli/AlgoRapids-Path-Optimization-Solutions | basic_brute_force.py | .py | 288bdd4b2028edca | 7 | 0 |
import heapq
from collections import deque
from typing import List
def min_cost_nk(ind: int, cost: List[int], dp: List[int], k: int) -> int:
"""
Calculates the minimum cost to reach the last index using DP with min-heap optimization.
Args:
ind: Current index (unused in this implementation)
... | devYRPauli/AlgoRapids-Path-Optimization-Solutions | basic_dp_heap.py | .py | 7982baaa5207fdea | 7 | 0 |
from typing import List
def min_cost_nk(ind: int, cost: List[int], dp: List[int], k: int) -> int:
"""
Calculate minimum cost to reach index using bottom-up DP.
Args:
ind: Target index to reach (unused in bottom-up approach)
cost: List of costs for each platform
dp: DP array fo... | devYRPauli/AlgoRapids-Path-Optimization-Solutions | basic_dp_iterative.py | .py | 8a596e95361d15a0 | 7 | 0 |
from typing import List
def min_cost_nk(ind: int, cost: List[int], dp: List[int], k: int) -> int:
"""
Calculate minimum cost to reach index using top-down DP with memoization.
Args:
ind: Target index to reach
cost: List of costs for each platform
dp: Memoization array for stor... | devYRPauli/AlgoRapids-Path-Optimization-Solutions | basic_dp_memoization.py | .py | d66135403a0f6048 | 7 | 0 |
from collections import deque
from typing import List
def min_cost_path(cost: List[int], k: int) -> None:
"""
Finds the minimum cost path using DP with monotonic queue optimization.
Args:
cost: A list of integers representing the cost of each platform
k: Maximum jump distanc... | devYRPauli/AlgoRapids-Path-Optimization-Solutions | basic_dp_monotonic_queue.py | .py | 701cfb8ba1a2c505 | 7 | 0 |
from typing import Tuple, List
def find_minimum_cost(n: int, cost: List[int], k: int, m: int) -> Tuple[int, List[int]]:
"""
Finds the minimum cost and path using brute force with exact number of jumps.
Args:
n: Number of platforms
cost: Cost to jump on each platform
k: Maximum dis... | devYRPauli/AlgoRapids-Path-Optimization-Solutions | exact_jumps_brute_force.py | .py | d06d2493d941ff0a | 7 | 0 |
import heapq
from typing import Tuple, List
def find_minimum_cost(n: int, cost: List[int], k: int, m: int) -> Tuple[float, List[int]]:
"""
Finds minimum cost and path using DP with min-heap for exact jumps problem.
Args:
n: Total number of platforms
cost: List of costs for landing on each... | devYRPauli/AlgoRapids-Path-Optimization-Solutions | exact_jumps_dp_heap.py | .py | fa438ce82f083afd | 7 | 0 |
from typing import Tuple, List
def find_minimum_cost_bottom_up(n: int, cost: List[int], k: int, m: int) -> Tuple[float, List[int]]:
"""
Finds minimum cost using bottom-up DP for exact jumps problem.
Args:
n: Total number of platforms
cost: List of costs for jumping on each platform
... | devYRPauli/AlgoRapids-Path-Optimization-Solutions | exact_jumps_dp_iterative.py | .py | ae30aafb043d8a02 | 7 | 0 |
from typing import Tuple, List, Optional
def find_minimum_cost(n: int, cost: List[int], k: int, m: int) -> Tuple[int, List[int]]:
"""
Finds minimum cost and path using top-down DP with memoization for exact jumps.
Args:
n: Number of platforms
cost: List of costs to jump on each platfo... | devYRPauli/AlgoRapids-Path-Optimization-Solutions | exact_jumps_dp_memoization.py | .py | aed637b6247605fd | 7 | 0 |
from collections import deque
from typing import List, Tuple
def find_minimum_cost(n: int, cost: List[int], k: int, m: int) -> Tuple[float, List[int]]:
"""
Finds minimum cost and path using DP with monotonic queue for exact jumps problem.
Args:
n: Number of platforms
cost: List of costs f... | devYRPauli/AlgoRapids-Path-Optimization-Solutions | exact_jumps_dp_monotonic_queue.py | .py | 4c44ddd9a6b4b5fa | 7 | 0 |
#!/usr/bin/env python3
# -*- coding: utf-8 -*-
"""
Created on Sun Dec 9 14:36:24 2019
Updated on Jan 2 2024
@author: James Farmer, Sadman Ahmed Shanto
Version 2.0
ChangeLog:
Calls an instance of printing_press.Editor and sends the articles to the Slack
channel ID specified in the accompanying text file 'channel.... | LFL-Lab/LFL_PaperBot | distributor.py | .py | 224760765969f886 | 7.39 | 5 |
#!/usr/bin/env python3
# -*- coding: utf-8 -*-
"""
Created on Sun Dec 8 09:12:38 2019
Updated on Jan 2 2020
@author: James Farmer, Sadman Ahmed Shanto
Version: 2.0
ChangeLog:
Two classes are defined below, Journalist and Editor.
The Journalist pulls RSS feeds, searches their contents, and generates a list
of the a... | LFL-Lab/LFL_PaperBot | printing_press.py | .py | 9f6c867d70ca6291 | 7.39 | 5 |
# aeb/core/audio_stream_manager.py
"""
Contains functions for managing the application's audio stream, including
starting, stopping, and reconfiguring the connection to the sound device.
"""
from typing import TYPE_CHECKING, Optional
import numpy as np
from aeb.core.audio_engine import AudioGenerator
from aeb.ui.widg... | ferocioustoast/AEB | aeb/core/audio_stream_manager.py | .py | 32e6e413e89b4a54 | 7.24 | 2 |
# aeb/core/generators/base.py
"""
Defines the abstract base class for all audio generators.
"""
import copy
from abc import ABC, abstractmethod
from typing import TYPE_CHECKING
import numpy as np
from aeb.config.constants import AUDIO_SAMPLE_RATE
if TYPE_CHECKING:
from aeb.app_context import AppContext
MAX_BUFF... | ferocioustoast/AEB | aeb/core/generators/base.py | .py | 46b24c182cda8211 | 7.24 | 2 |
# aeb/core/generators/noise.py
"""
Contains the audio generator for various types of noise.
"""
import numpy as np
from scipy import signal as scipy_signal
from aeb.core.audio_math import generate_brown_noise, generate_white_noise
from aeb.core.generators.base import AudioGeneratorBase
class NoiseGenerator(AudioGene... | ferocioustoast/AEB | aeb/core/generators/noise.py | .py | bac850e85d159d76 | 7.24 | 2 |
# aeb/core/path_utils.py
"""
Contains utility functions for resolving and relativizing file paths,
particularly for audio samples, to ensure scene portability.
"""
import os
from aeb.config.constants import CONFIG_FILE_PATH
def get_samples_dir() -> str:
"""
Calculates and returns the absolute path to the 'Sam... | ferocioustoast/AEB | aeb/core/path_utils.py | .py | 88ad807131847689 | 7.24 | 2 |
# aeb/services/active_config_proxy.py
"""
Defines the ActiveConfigProxy, a unified interface for accessing settings
from the currently active scene slot in the AppContext.
"""
from typing import TYPE_CHECKING, Any
if TYPE_CHECKING:
from aeb.app_context import AppContext
class ActiveConfigProxy:
"""
A pro... | ferocioustoast/AEB | aeb/services/active_config_proxy.py | .py | 5c80ed181f2e9ab3 | 7.24 | 2 |
# aeb/services/controller.py
"""
Manages the virtual Xbox 360 controller functionality using the ViGEmBus
driver. Handles rumble events and provides utility functions.
"""
import logging
import time
from typing import TYPE_CHECKING
import numpy as np
try:
import vgamepad as vg
g_controller_available = True
ex... | ferocioustoast/AEB | aeb/services/controller.py | .py | d842f4437f149def | 7.24 | 2 |
# aeb/services/hotkey_manager.py
"""
Contains the HotkeyManager service for global keyboard event listening.
"""
import time
from typing import TYPE_CHECKING, Optional, Set, List, Dict
from PySide6.QtCore import QObject, Signal
try:
from pynput import keyboard
G_PYNPUT_AVAILABLE = True
except (ImportError, Mo... | ferocioustoast/AEB | aeb/services/hotkey_manager.py | .py | 94f84634713a9186 | 7.24 | 2 |
# aeb/services/scene_transition_manager.py
"""
Contains the SceneTransitionManager, a state machine that orchestrates the
smooth, timed transition between different scenes in the playlist.
"""
import time
from typing import TYPE_CHECKING
import numpy as np
if TYPE_CHECKING:
from aeb.app_context import AppContext
... | ferocioustoast/AEB | aeb/services/scene_transition_manager.py | .py | 8674edbc61ca5d7f | 7.24 | 2 |
# aeb/services/screen_flow.py
"""
Contains the ScreenFlowService class, which manages screen capture and
rhythmic motion analysis.
"""
import collections
import threading
import time
import traceback
from typing import TYPE_CHECKING, Optional
import cv2
import mss
import numpy as np
from PySide6.QtCore import QRect
fr... | ferocioustoast/AEB | aeb/services/screen_flow.py | .py | 64404d36157e07fd | 7.24 | 2 |
# aeb/services/system_lfo_manager.py
"""
Contains the SystemLfoManager, a service that provides a high-level API for
managing the application's system_lfos configuration.
"""
import copy
from typing import TYPE_CHECKING, Any
from PySide6.QtCore import QObject, Signal
if TYPE_CHECKING:
from aeb.app_context import ... | ferocioustoast/AEB | aeb/services/system_lfo_manager.py | .py | b52a8ba75b75e1a9 | 7.24 | 2 |
# aeb/services/tcode_parser.py
"""
Handles the parsing of T-Code data strings and updating the shared T-Code
state within the AppContext.
"""
import logging
import time
from typing import TYPE_CHECKING
import numpy as np
from aeb.config.constants import BIPOLAR_AXES, TCODE_PATTERN
if TYPE_CHECKING:
from aeb.app_... | ferocioustoast/AEB | aeb/services/tcode_parser.py | .py | 46b86b70c366962c | 7.24 | 2 |
# aeb/services/udp_server.py
"""
Contains the UdpTCodeServer class, which manages the UDP T-Code server
in a self-contained, object-oriented manner.
"""
import logging
import socket
import threading
from typing import TYPE_CHECKING, Optional
from aeb.services.tcode_parser import parse_tcode_string
if TYPE_CHECKING:
... | ferocioustoast/AEB | aeb/services/udp_server.py | .py | 974fc88798e7205d | 7.24 | 2 |
# aeb/ui/widgets/inspectors/base.py
"""
Defines the abstract base class for all waveform inspector panels.
"""
from typing import TYPE_CHECKING
from PySide6.QtCore import Signal
from PySide6.QtWidgets import QFrame
if TYPE_CHECKING:
from aeb.app_context import AppContext
from aeb.ui.main_window import MainWin... | ferocioustoast/AEB | aeb/ui/widgets/inspectors/base.py | .py | dec012e05a4e612c | 7.74 | 2 |
# aeb/ui/widgets/inspectors/preset_showcase.py
"""
Defines the PresetShowcase panel for editing Waveform Group metadata.
"""
from typing import TYPE_CHECKING
from PySide6.QtWidgets import (
QFormLayout, QFrame, QLabel, QLineEdit, QScrollArea, QTextEdit,
QVBoxLayout, QWidget
)
from aeb.ui.widgets.inspectors.ba... | ferocioustoast/AEB | aeb/ui/widgets/inspectors/preset_showcase.py | .py | 08ccfb19a30d5e9f | 7.74 | 2 |
import os
import re
import matplotlib.colors as mcolors
import numpy as np
def load_pipeline(folder):
"""Load pipeline configuration from experiment folder."""
pipeline_file = os.path.join(folder, "pipeline.log")
return file2dic(pipeline_file)
# TODO: Extract this
styles = {
0: ("#9ce4f3", "#128099... | LauAvinyo/limblab | archive/_utils.py | .py | b416e24cef0aa4f5 | 7.35 | 4 |
"""
LimbLab Command Line Interface
This module provides the command-line interface for the LimbLab library,
enabling automated processing and analysis of limb development data.
The CLI supports the complete pipeline from raw data to visualization:
1. Create experiment structure
2. Clean and preprocess volume data
3. ... | LauAvinyo/limblab | packages/limblab-cli/limblab_cli/main.py | .py | 5fa2d7afe08b9838 | 7.35 | 4 |
from limblab import clean, get_channel_path, pick_isovalues, save_experiment
from limblab.design import theme
from limblab.params import CleanParams
from PyQt6.QtWidgets import (
QComboBox,
QDoubleSpinBox,
QGroupBox,
QHBoxLayout,
QMessageBox,
QSpinBox,
QVBoxLayout,
QWidget,
)
from vedo i... | LauAvinyo/limblab | packages/limblab-gui/limblab_gui/Controllers/clean_controller.py | .py | 69cc015791b39ca6 | 7.35 | 4 |
import os
from limblab import (
extract_surface,
get_nuclei_channel_path,
pick_isovalue,
)
from limblab.database.crud import save_experiment
from limblab.design import theme
from PyQt6.QtCore import QThread, pyqtSignal, QObject
from PyQt6.QtWidgets import (
QHBoxLayout,
QMessageBox,
QWidget,
)
... | LauAvinyo/limblab | packages/limblab-gui/limblab_gui/Controllers/surface_controller.py | .py | 88b862fe2595339f | 7.35 | 4 |
import pyqtgraph.opengl as gl
from limblab.design import theme
from PyQt6.QtCore import Qt
from PyQt6.QtWidgets import (
QLabel,
QPushButton,
QSizePolicy,
QSlider,
QToolButton,
QVBoxLayout,
QWidget,
)
def create_styled_button(
text: str,
color: str | None = None,
hover_color: ... | LauAvinyo/limblab | packages/limblab-gui/limblab_gui/Controllers/utils.py | .py | de86fe822ee3a818 | 7.35 | 4 |
# pyright: reportOptionalMemberAccess=false
from typing import Callable
from config import *
from limblab.vizutils import *
from PyQt6.QtCore import Qt
from PyQt6.QtWidgets import QMessageBox
class NavigationMixin:
# Types
nav_stack: list
current_screen: Callable | None
menuBar: Callable
# Navi... | LauAvinyo/limblab | packages/limblab-gui/limblab_gui/Mixin/NavigationMixin.py | .py | 43a221f9744b756b | 7.35 | 4 |
import webbrowser
from limblab.design import theme
from PyQt6.QtGui import QAction
from PyQt6.QtWidgets import (
QHBoxLayout,
QLabel,
QMenu,
QScrollArea,
QToolButton,
QVBoxLayout,
QWidget,
)
from utils import create_back_button, create_collapsible_section
from vedo import printc
class Men... | LauAvinyo/limblab | packages/limblab-gui/limblab_gui/menu_utils.py | .py | e1cefef892007763 | 7.35 | 4 |
import webbrowser
import numpy as np
import pyqtgraph.opengl as gl
from config import *
from limblab.design import theme
from PyQt6.QtCore import QObject, Qt, pyqtSignal
from PyQt6.QtGui import QAction, QIcon
from PyQt6.QtWidgets import (
QLabel,
QMenu,
QPushButton,
QSizePolicy,
QSlider,
QTool... | LauAvinyo/limblab | packages/limblab-gui/limblab_gui/utils.py | .py | 4e63c8c280b75a8c | 7.35 | 4 |
import os
import sys
from pathlib import Path
from types import SimpleNamespace
import vtkmodules
from PyQt6.QtWidgets import QApplication, QMenuBar
from vedo import Mesh, Plotter
from vtkmodules.qt.QVTKRenderWindowInteractor import QVTKRenderWindowInteractor
from PyQt6.QtGui import (
QAction)
from limblab.models ... | LauAvinyo/limblab | packages/limblab-gui/limblab_gui/vis_test.py | .py | 286e76dd81c195a7 | 7.85 | 4 |
import limblab
import re
from limblab.models import Experiment
from .crud import save_experiment
import sqlite3
from pathlib import Path
DATABASE_EXPERIMENT_ACTION = {
'Clean': ['clean_path', 'clean_isovalue_min', 'clean_isovalue_max'],
'Surface': ['surface_path', 'surface_isovalue'],
'Stage': ['stage'],
... | LauAvinyo/limblab | packages/limblab/limblab/database/navigation.py | .py | 8892068513cdef8b | 7.35 | 4 |
from __future__ import annotations
import json
from pathlib import Path
from typing import Any
DESIGN_TOKEN_PATH = Path(__file__).with_name("design_tokens.json")
try:
with DESIGN_TOKEN_PATH.open("r", encoding="utf-8") as fp:
DESIGN_TOKENS: dict[str, Any] = json.load(fp)
except FileNotFoundError:
DESI... | LauAvinyo/limblab | packages/limblab/limblab/design.py | .py | e92f4b719b707839 | 7.35 | 4 |
from pathlib import Path
from typing import List, Optional
from sqlalchemy import JSON, Column
from sqlmodel import Field, Relationship, SQLModel
class Channel(SQLModel, table=True):
"""Database table for dynamic image channels."""
id: Optional[int] = Field(default=None, primary_key=True)
experiment_id:... | LauAvinyo/limblab | packages/limblab/limblab/models.py | .py | 7d88d50d8853b2e4 | 7.35 | 4 |
# limblab/tools/surface.py
import os
from pathlib import Path
from typing import Any, Literal, Optional
from vedo import Volume
from vedo.applications import IsosurfaceBrowser
from vedo.pyplot import histogram
from limblab.exceptions import VolumeProcessingError
from limblab.models import Channel, Experiment
from lim... | LauAvinyo/limblab | packages/limblab/limblab/tools/surface.py | .py | 138e2dc482462bb8 | 7.35 | 4 |
import os
from typing import Any, Literal, Optional
import numpy as np
from limblab.design import theme
from limblab.models import Experiment
from limblab.utils import generate_kwargs
from vedo import Line, Plotter, Volume, show
from vedo.pyplot import plot
def _probe(
volume_paths: list[str],
channel_names:... | LauAvinyo/limblab | packages/limblab/limblab/vis/probe.py | .py | d3240da73952880f | 7.35 | 4 |
"""LimbLab Plotter"""
from typing import Any, Literal, Optional
import numpy as np
from limblab.design import theme
from limblab.models import Channel, Experiment
from vedo import Volume, Plotter
from vedo.applications import (
RayCastPlotter,
)
import os
from limblab.utils import generate_kwargs
# TODO:
# This... | LauAvinyo/limblab | packages/limblab/limblab/vis/raycast.py | .py | 1dbe2776e16c3aec | 7.35 | 4 |
"""Tests for backend-aware cache_on_runner command generation."""
# pylint: disable=protected-access
import json
import os
from unittest import mock
from CelebiChrono.utils.metadata import ConfigFile
from Yuki.kernel.container_job import ContainerJob
def _job(machine_id="m1", is_input=False, cache=True):
"""Buil... | CelebiProjects/Yuki | UnitTest/test_cache_on_runner.py | .py | 36c766e2af5326f2 | 7.5 | 0 |
"""Tests for live log collection while a job is running."""
from unittest import mock
from Yuki.kernel.status_constants import CODA, FAILED, IN_MOVEMENT
def _storage(tmp_path):
from Yuki.kernel import impression_storage as ims
s = ims.ImpressionStorage.__new__(ims.ImpressionStorage)
s.project_uuid = "pro... | CelebiProjects/Yuki | UnitTest/test_collect_logs_live.py | .py | ce2de57b0c970c2b | 7.5 | 0 |
"""Tests for ContainerJob output discovery."""
from Yuki.kernel.container_job import ContainerJob
def _make_container(path, machine_id="runner-1"):
c = ContainerJob.__new__(ContainerJob, str(path), machine_id)
c.path = str(path)
c.machine_id = machine_id
return c
def test_outputs_returns_relative_pa... | CelebiProjects/Yuki | UnitTest/test_container_job.py | .py | 8787d71b82c8a583 | 7.5 | 0 |
"""Tests for the `yuki docker` CLI commands (Yuki/main.py)."""
from unittest import mock
from click.testing import CliRunner
from Yuki.main import cli
def _run(args, info_stdout=''):
"""Invoke the CLI with subprocess mocked; info_stdout fakes `docker info` output."""
runner = CliRunner()
with mock.patch... | CelebiProjects/Yuki | UnitTest/test_docker_cli.py | .py | 1e8d202364b3694a | 7.5 | 0 |
"""Tests for the error-log route's offset support."""
from unittest import mock
from Yuki.server.routes import status as status_routes
def _app():
"""Create a minimal Flask app with the status blueprint."""
from flask import Flask
app = Flask(__name__)
app.register_blueprint(status_routes.bp)
ret... | CelebiProjects/Yuki | UnitTest/test_error_log_route.py | .py | 38888786855fe53c | 7.5 | 0 |
"""Tests for the file staging helpers."""
# pylint: disable=protected-access
import json
import os
from Yuki.kernel.file_staging import FileStager, walk_files
def test_walk_files_yields_relative_paths(tmp_path):
"""walk_files yields paths relative to the walked root."""
root = tmp_path / "root"
root.mkdi... | CelebiProjects/Yuki | UnitTest/test_file_staging.py | .py | 92d81b7c90cf07f6 | 7.5 | 0 |
"""Tests for the file_types classification helpers."""
from Yuki.kernel import file_types
def test_is_plot_by_extension():
"""is_plot matches image extensions case-insensitively."""
assert file_types.is_plot("mass.png") is True
assert file_types.is_plot("fit.PDF") is True # case-insensitive
a... | CelebiProjects/Yuki | UnitTest/test_file_types.py | .py | 8890cfc0dddf67c7 | 7.5 | 0 |
"""Tests for the imp-view page listing."""
import os
from unittest import mock
from Yuki.server.routes import status as status_routes
def _stub_config(root):
"""A config shim returning the fixture directory as the job path."""
stub = mock.MagicMock()
stub.get_job_path = lambda p, i: str(root)
return ... | CelebiProjects/Yuki | UnitTest/test_imp_view.py | .py | 839be5d266c1e3bc | 7.5 | 0 |
"""Tests for ReanaWorkflow.upload_file."""
# pylint: disable=protected-access
import os
from unittest import mock
from Yuki.kernel import reana_workflow
class _FakeJob:
"""Minimal job object for upload_file; like a real VJob it has no
use_eos attribute, only the cache_on_runner replacement."""
def __ini... | CelebiProjects/Yuki | UnitTest/test_reana_upload_file.py | .py | 7cffdab269f4f943 | 7.5 | 0 |
"""Tests for ReanaWorkflow file selection and download helpers."""
import os
from unittest import mock
import pytest
from Yuki.kernel import reana_workflow
def _make_wf():
wf = reana_workflow.ReanaWorkflow.__new__(reana_workflow.ReanaWorkflow)
wf.machine_id = "runner-1"
wf.project_uuid = "proj-1"
wf... | CelebiProjects/Yuki | UnitTest/test_reana_workflow_select.py | .py | 4861677a1d481803 | 7.5 | 0 |
"""Tests for submit-time validation of remote-hosted data runner binding."""
import json
from unittest import mock
from Yuki.server import tasks
def _marker(tmp_path, project, impression, host_runner):
marker_dir = tmp_path / ".Yuki" / "Storage" / project / impression
marker_dir.mkdir(parents=True, exist_ok=... | CelebiProjects/Yuki | UnitTest/test_remote_data_validation.py | .py | 7ca1dc6d48c2225c | 7.5 | 0 |
"""Tests for select route handlers."""
from unittest import mock
from Yuki.server.routes import workflow as wf_routes
from Yuki.server.routes import execution as ex_routes
from Yuki.server.routes import upload as up_routes
def test_collect_files_route_passes_spec():
"""collect-files forwards kind and pattern to ... | CelebiProjects/Yuki | UnitTest/test_routes_select.py | .py | fa86ef45dcda20fe | 7.5 | 0 |
"""Tests for listing conda environments on runners."""
import json
import os
import subprocess
import tempfile
from unittest import mock
from CelebiChrono.utils.metadata import ConfigFile
from Yuki.server import runner_probe
from Yuki.server.routes import runner as runner_routes
def _app(bp):
from flask import F... | CelebiProjects/Yuki | UnitTest/test_runner_envs.py | .py | c8f77c5b75d54233 | 7.5 | 0 |
"""Tests for runner capability probing and test-runner endpoints."""
import json
import os
import subprocess
import tempfile
from unittest import mock
from CelebiChrono.utils.metadata import ConfigFile
from Yuki.server import runner_probe
from Yuki.server.routes import runner as runner_routes
def _app(bp):
from ... | CelebiProjects/Yuki | UnitTest/test_runner_probe.py | .py | 2728dc4b458ab1f6 | 7.5 | 0 |
"""Tests for VWorkflow.create backend-type resolution and persistence."""
import json
import os
import tempfile
import unittest
from unittest.mock import MagicMock, patch
from Yuki.kernel.vworkflow import VWorkflow
class TestVWorkflowCreate(unittest.TestCase):
"""Verify the factory picks the right subclass and p... | CelebiProjects/Yuki | UnitTest/test_vworkflow_create.py | .py | 0ee3756e79a69a89 | 7.5 | 0 |
Subsets and Splits
No community queries yet
The top public SQL queries from the community will appear here once available.