text stringlengths 185 73.3k | repo stringlengths 7 100 | path stringlengths 4 146 | language stringclasses 7
values | hash stringlengths 16 16 | score float64 7 8.5 | stars int64 0 237k |
|---|---|---|---|---|---|---|
"""
Given head, the head of a linked list, determine if the
linked list has a cycle in it.
There is a cycle in a linked list if there is some node in
the list that can be reached again by continuously following
the next pointer. Internally, pos is used to denote the
index of the node that tail's next pointer is co... | kantarcise/notebook | Leet_Code/easy/141_Linked_List_Cycle.py | .py | 1f0bced30f421f12 | 7.48 | 8 |
"""
Given a string s of zeros and ones, return the maximum score
after splitting the string into two non-empty
substrings (i.e. left substring and right substring).
The score after splitting a string is the number of zeros
in the left substring plus the number of
ones in the right substring.
Example 1:
Input: s ... | kantarcise/notebook | Leet_Code/easy/1422_Maximum_Score_After_Splitting_a_String.py | .py | f513225fc1f5ac56 | 7.48 | 8 |
"""
You are given the array paths, where paths[i] = [cityAi, cityBi] means there exists a
direct path going from cityAi to cityBi. Return the destination city, that is, the
city without any path outgoing to another city.
It is guaranteed that the graph of paths forms a line without any
loop, therefore, there will b... | kantarcise/notebook | Leet_Code/easy/1436_Destination_City.py | .py | f8da4393dd0f020b | 7.48 | 8 |
"""
Given the array of integers nums, you will choose two different indices i and
j of that array. Return the maximum value of (nums[i]-1)*(nums[j]-1).
Example 1:
Input: nums = [3,4,5,2]
Output: 12
Explanation: If you choose the indices i=1 and j=2 (indexed from 0), you will
get the maximum value, that is, (nums[1... | kantarcise/notebook | Leet_Code/easy/1464_Maximum_Product of_Two_Elements_in_an_Array.py | .py | 0706a1911d5816a3 | 7.48 | 8 |
"""
Write a function to find the longest common
prefix string amongst an array of strings.
If there is no common prefix, return an empty string "".
Example 1:
Input: strs = ["flower","flow","flight"]
Output: "fl"
Example 2:
Input: strs = ["dog","racecar","car"]
Output: ""
Explan... | kantarcise/notebook | Leet_Code/easy/14_Longest_Common_Prefix.py | .py | 125744129300489d | 7.48 | 8 |
"""
Given an array of integers nums, return
the number of good pairs.
A pair (i, j) is called good if nums[i] == nums[j] and i < j.
Example 1:
Input: nums = [1,2,3,1,1,3]
Output: 4
Explanation:
There are 4 good pairs (0,3), (0,4), (3,4), (2,5) 0-indexed.
Example 2:
Input: nums = [1,1,1,1]
Output: 6
Explanation... | kantarcise/notebook | Leet_Code/easy/1512_Number_of_Good_Pairs.py | .py | 44702d147672fe64 | 7.48 | 8 |
"""
Given a string s of lower and upper case English letters.
A good string is a string which doesn't have two adjacent
characters s[i] and s[i + 1] where:
0 <= i <= s.length - 2
s[i] is a lower-case letter and s[i + 1] is the same
letter but in upper-case or vice-versa.
To make the string good, yo... | kantarcise/notebook | Leet_Code/easy/1544_Make_The_String_Great.py | .py | a04e6aaf1a8b1e9d | 7.48 | 8 |
"""
Given an integer n, add a dot (".") as the
thousands separator and return it in string format.
Example 1:
Input: n = 987
Output: "987"
Example 2:
Input: n = 1234
Output: "1.234"
Constraints:
0 <= n <= 2^31 - 1
"""
from collections import deque
class Solution:
def thousandSepa... | kantarcise/notebook | Leet_Code/easy/1556_Thousand_Separator.py | .py | b067de0f6a70a5ec | 7.48 | 8 |
"""
Given an m x n binary matrix mat, return the number of
special positions in mat.
A position (i, j) is called special if mat[i][j] == 1 and all
other elements in row i and column j are 0 (rows and
columns are 0-indexed).
Example 1:
Input: mat = [[1,0,0],[0,0,1],[1,0,0]]
Output: 1
Explanation: (1, 2) is a speci... | kantarcise/notebook | Leet_Code/easy/1582_Special_Positions_in_a_Binary_Matrix.py | .py | b573d2f1208757c6 | 7.98 | 8 |
"""
A string is a valid parentheses string (denoted VPS) if
it meets one of the following:
It is an empty string "", or a single character not equal to "(" or ")",
It can be written as AB (A concatenated with B), where A and B are VPS's, or
It can be written as (A), where A is a VPS.
We can similarly define the nest... | kantarcise/notebook | Leet_Code/easy/1614_Maximum_Nesting_Depth_of_the_Parentheses.py | .py | 918cb7e425f31a43 | 7.48 | 8 |
"""
Given a string s, return the length of the longest substring
between two equal characters, excluding the two characters.
If there is no such substring return -1.
A substring is a contiguous sequence of characters within a string.
Example 1:
Input: s = "aa"
Output: 0
Explanation: The optimal substring here is a... | kantarcise/notebook | Leet_Code/easy/1624_Largest_Substring_Between_Two_Equal_Characters.py | .py | 4f3923a0e96b0d7d | 7.48 | 8 |
"""
You own a Goal Parser that can interpret a string command. The command
consists of an alphabet of "G", "()" and/or "(al)" in some order. The Goal
Parser will interpret "G" as the string "G", "()" as the string "o", and "(al)"
as the string "al". The interpreted strings are then concatenated
in the original orde... | kantarcise/notebook | Leet_Code/easy/1678_Goal_Parser_Interpretation.py | .py | 94da955533e60e7b | 7.48 | 8 |
"""
Given an array nums of size n, return the majority element.
The majority element is the element that appears more
than ⌊n / 2⌋ times. You may assume that the majority
element always exists in the array.
Example 1:
Input: nums = [3,2,3]
Output: 3
Example 2:
Input: nums = [2,2,1,1,1,2,2]
Output: 2
Constraint... | kantarcise/notebook | Leet_Code/easy/169_majority_element.py | .py | 47c9a37fae7c724f | 7.48 | 8 |
"""
You are given a string s of even length. Split this string into two
halves of equal lengths, and let a be the first half and b be the second half.
Two strings are alike if they have the same number of vowels
('a', 'e', 'i', 'o', 'u', 'A', 'E', 'I', 'O', 'U'). Notice that s
contains uppercase and lowercase lette... | kantarcise/notebook | Leet_Code/easy/1704_Determine_if_String_Halves_Are_Alike.py | .py | 0bbadf74aab90744 | 7.48 | 8 |
"""
There is a hidden integer array arr that consists of
n non-negative integers.
It was encoded into another integer array encoded of
length n - 1, such that encoded[i] = arr[i] XOR arr[i + 1].
For example, if arr = [1,0,2,1], then encoded = [1,2,3].
You are given the encoded array. You are also given an
intege... | kantarcise/notebook | Leet_Code/easy/1720_Decode_XORed_Array.py | .py | 1139c759402dae86 | 7.48 | 8 |
"""
You are given a string s consisting only of the characters '0'
and '1'. In one operation, you can change any '0' to '1' or vice versa.
The string is called alternating if no two adjacent characters are equal.
For example, the string "010" is alternating, while the string "0100" is not.
Return the minimum number... | kantarcise/notebook | Leet_Code/easy/1758_Minimum_Changes_To_Make_Alternating_Binary_String.py | .py | e311f1771df376fe | 7.48 | 8 |
"""
You are given an array of strings words (0-indexed).
In one operation, pick two distinct indices i and j, where words[i] is
a non-empty string, and move any character from words[i] to any
position in words[j].
Return true if you can make every string in words equal using
any number of operations, and false oth... | kantarcise/notebook | Leet_Code/easy/1897_Redistribute_Characters_to_Make_All_Strings_Equal.py | .py | 8b8f5a4013090d15 | 7.48 | 8 |
"""
The product difference between two pairs (a, b) and (c, d) is defined as (a * b) - (c * d).
For example, the product difference between (5, 6) and (2, 7) is (5 * 6) - (2 * 7) = 16.
Given an integer array nums, choose four distinct indices w, x, y, and z such that
the product difference between pairs (nums[w], nu... | kantarcise/notebook | Leet_Code/easy/1913_Maximum_Product_Difference_Between_Two_Pairs.py | .py | 8772d0f0ab53b3a7 | 7.48 | 8 |
"""
Write a function that takes the binary
representation of a positive integer and
returns the number of set bits it
has (also known as the Hamming weight).
Example 1:
Input: n = 11
Output: 3
Explanation:
The input binary string 1011 has a total of three set bits.
Example 2:
Input: n = ... | kantarcise/notebook | Leet_Code/easy/191_Number_of_1_Bits.py | .py | e7433b49db95a4a7 | 7.48 | 8 |
"""
Given an array of integers nums and an integer target, return
indices of the two numbers such that they add up to target.
You may assume that each input would have exactly
one solution, and you may not use the same
element twice.
You can return the answer in any order.
Example 1:
Input: nums = [2,7,11,15... | kantarcise/notebook | Leet_Code/easy/1_Two_Sum.py | .py | 8915f890407d79b9 | 7.48 | 8 |
"""
Given a 0-indexed string word and a character ch,
reverse the segment of word that starts at index
0 and ends at the index of the first occurrence
of ch (inclusive).
If the character ch does not exist in word, do nothing.
For example, if word = "abcdefd" and ch = "d", then
you should reverse the segment that... | kantarcise/notebook | Leet_Code/easy/2000_Reverse_Prefix_of_Word.py | .py | 1d16260967315be7 | 7.48 | 8 |
"""
There is a programming language with only four operations and one variable X:
++X and X++ increments the value of the variable X by 1.
--X and X-- decrements the value of the variable X by 1.
Initially, the value of X is 0.
Given an array of strings operations containing a list of operations,
return the final va... | kantarcise/notebook | Leet_Code/easy/2011_Final_Value_of_Variable_After_Performing_Operations.py | .py | fa6136a6ab786d12 | 7.48 | 8 |
"""
Write an algorithm to determine if a
number n is happy.
A happy number is a number defined by
the following process:
Starting with any positive integer, replace
the number by the sum of the squares
of its digits.
Repeat the process until the number equals
1 (where it will... | kantarcise/notebook | Leet_Code/easy/202_Happy_Number.py | .py | a6a06062d96c17ae | 7.48 | 8 |
"""
There are n seats and n students in a room.
You are given an array seats of length n, where
seats[i] is the position of the ith seat. You are
also given the array students of length n, where
students[j] is the position of the jth student.
You may perform the following move any number of times:
Increase or dec... | kantarcise/notebook | Leet_Code/easy/2037_Minimum_Number_of_Moves_to_Seat_Everyone.py | .py | d75c9ef7f5dd326c | 7.48 | 8 |
"""
Given two strings s and t, determine if they
are isomorphic.
Two strings s and t are isomorphic if the characters in
s can be replaced to get t.
All occurrences of a character must be replaced with another
character while preserving the order of characters.
No two characters may map to the same character, bu... | kantarcise/notebook | Leet_Code/easy/205_Isomorphic_Strings.py | .py | f7dd9a0c18108681 | 7.48 | 8 |
"""
Given the head of a singly linked list, reverse the
list, and return the reversed list.
Example 1:
Input: head = [1,2,3,4,5]
Output: [5,4,3,2,1]
Example 2:
Input: head = [1,2]
Output: [2,1]
Example 3:
Input: head = []
Output: []
Constraints:
The number of nodes in the list is the range [0, 5000].
-500... | kantarcise/notebook | Leet_Code/easy/206_Reverse_Linked_List.py | .py | 0a2db5439278d107 | 7.48 | 8 |
"""
There are n people in a line queuing to buy tickets, where
the 0th person is at the front of the line and
the (n - 1)th person is at the back of the line.
You are given a 0-indexed integer array tickets of length
n where the number of tickets that the ith person would
like to buy is tickets[i].
Each person ta... | kantarcise/notebook | Leet_Code/easy/2073_Time_Needed_to_Buy_Tickets.py | .py | 3514c3213cc99fda | 7.48 | 8 |
"""
A sentence is a list of words that are separated by a
single space with no leading or trailing spaces.
You are given an array of strings sentences, where
each sentences[i] represents a single sentence.
Return the maximum number of words that
appear in a single sentence.
Example 1:
Input: sentences = ["alice ... | kantarcise/notebook | Leet_Code/easy/2114_Maximum_Number_of_Words_Found_in_Sentences.py | .py | 16110266e3f540fd | 7.48 | 8 |
"""
A string s can be partitioned into groups of
size k using the following procedure:
The first group consists of the first k characters
of the string, the second group consists of the next
k characters of the string, and so on.
Each character can be a part of exactly one group.
For the last group, if the strin... | kantarcise/notebook | Leet_Code/easy/2138_Divide_a_String_Into_Groups_of_Size_k.py | .py | bfb5f73d5868712a | 7.48 | 8 |
"""
Given an integer array nums and an integer k, return true
if there are two distinct indices i and j in the array such
that nums[i] == nums[j] and abs(i - j) <= k.
Example 1:
Input: nums = [1,2,3,1], k = 3
Output: true
Example 2:
Input: nums = [1,0,1,1], k = 1
Output: true
Example 3:
Input: nums = [1,2,3,1,... | kantarcise/notebook | Leet_Code/easy/219_Contains_Duplicate_II.py | .py | d80f8f46196b055c | 7.48 | 8 |
from datetime import datetime, timezone
import boto3
from cloud_governance.cloud_resource_orchestration.clouds.aws.ec2.collect_cro_reports import CollectCROReports
from cloud_governance.cloud_resource_orchestration.clouds.aws.ec2.cost_over_usage import CostOverUsage
from cloud_governance.cloud_resource_orchestration.... | redhat-performance/cloud-governance | cloud_governance/cloud_resource_orchestration/clouds/aws/ec2/run_cro.py | .py | 26b0f4cf61dd7e59 | 7.64 | 18 |
import boto3
import typeguard
from cloud_governance.common.clouds.aws.ec2.ec2_operations import EC2Operations
from cloud_governance.common.jira.jira_operations import JiraOperations
from cloud_governance.common.ldap.ldap_search import LdapSearch
from cloud_governance.common.logger.init_logger import logger
from cloud_... | redhat-performance/cloud-governance | cloud_governance/cloud_resource_orchestration/clouds/aws/ec2/tag_cro_instances.py | .py | 4d73eddcbe1024c1 | 7.64 | 18 |
import json
import tempfile
from abc import ABC
from datetime import datetime
import typeguard
from cloud_governance.cloud_resource_orchestration.clouds.aws.ec2.aws_tagging_operations import AWSTaggingOperations
from cloud_governance.cloud_resource_orchestration.common.abstract_monitor_tickets import AbstractMonito... | redhat-performance/cloud-governance | cloud_governance/cloud_resource_orchestration/clouds/azure/resource_groups/azure_monitor_tickets.py | .py | 1836ed357ca8fec2 | 7.64 | 18 |
import typeguard
from cloud_governance.cloud_resource_orchestration.clouds.common.abstract_tagging_operations import \
AbstractTaggingOperations
from cloud_governance.common.clouds.azure.compute.resource_group_operations import ResourceGroupOperations
from cloud_governance.common.logger.logger_time_stamp import ... | redhat-performance/cloud-governance | cloud_governance/cloud_resource_orchestration/clouds/azure/resource_groups/azure_tagging_operations.py | .py | 065500536636f4ad | 7.64 | 18 |
import logging
from abc import ABC
from datetime import datetime, timedelta, timezone
import typeguard
from cloud_governance.cloud_resource_orchestration.clouds.aws.ec2.cost_over_usage import CostOverUsage
from cloud_governance.common.clouds.aws.iam.iam_operations import IAMOperations
from cloud_governance.common.ela... | redhat-performance/cloud-governance | cloud_governance/cloud_resource_orchestration/clouds/common/abstract_collect_cro_reports.py | .py | d78ec2ca2156965a | 7.64 | 18 |
from abc import ABC, abstractmethod
class AbstractTaggingOperations(ABC):
"""
This class is abstract tagging operations to all the clouds
"""
def __init__(self):
super().__init__()
@abstractmethod
def get_resources_list(self, tag_name: str, tag_value: str = ''):
raise NotImpl... | redhat-performance/cloud-governance | cloud_governance/cloud_resource_orchestration/clouds/common/abstract_tagging_operations.py | .py | 196c9d76b9ce940a | 7.14 | 18 |
from cloud_governance.cloud_resource_orchestration.common.run_cro import RunCRO
from cloud_governance.common.jira.jira import logger
from cloud_governance.common.logger.logger_time_stamp import logger_time_stamp
from cloud_governance.main.environment_variables import environment_variables
class CloudMonitor:
"""
... | redhat-performance/cloud-governance | cloud_governance/cloud_resource_orchestration/monitor/cloud_monitor.py | .py | 78b510a908e1d095 | 7.64 | 18 |
import re
from datetime import datetime
from typing import Union
from cloud_governance.main.environment_variables import environment_variables
_ISO_DATETIME_OFFSET_RE = re.compile(r'[+-]\d{2}:\d{2}$')
def parse_iso_datetime(value: str) -> datetime:
"""
This method parses an ISO 8601 datetime string, tolerat... | redhat-performance/cloud-governance | cloud_governance/cloud_resource_orchestration/utils/common_operations.py | .py | a0ee5bad70e520aa | 7.64 | 18 |
from abc import ABC, abstractmethod
from datetime import datetime, timezone
from cloud_governance.main.environment_variables import environment_variables
class AbstractAthenaOperations(ABC):
CURRENT_DATE = str(datetime.now(tz=timezone.utc).date()).replace("-", "")
def __init__(self):
self.__environ... | redhat-performance/cloud-governance | cloud_governance/common/clouds/aws/athena/abstract_athena_operations.py | .py | e7f80dc6f49d4fa6 | 7.64 | 18 |
import boto3
import typeguard
from cloud_governance.common.clouds.aws.athena.abstract_athena_operations import AbstractAthenaOperations
from cloud_governance.common.logger.init_logger import logger
from cloud_governance.common.logger.logger_time_stamp import logger_time_stamp
class BotoClientAthenaOperations(Abstrac... | redhat-performance/cloud-governance | cloud_governance/common/clouds/aws/athena/boto3_client_athena_operations.py | .py | 87885da42d58bef8 | 7.64 | 18 |
# infections.py
#
# A utility that provides a list of infections (forced internal errors).
# Infections are injected into the application via the environment variable
# 'INFECTIONS', a comma-separated list of infection names.
from typing import Dict, Set
from django.conf import settings
from api.utils import deploym... | xchem/fragalysis-backend | api/infections.py | .py | 2a01b7463a36ae22 | 7.45 | 7 |
# pylint: skip-file
import logging
import os
from dataclasses import dataclass
from pathlib import Path
from typing import Any, Dict, Optional
from wsgiref.util import FileWrapper
import ta_auth_connector
from django.conf import settings
from django.contrib.auth import get_user_model
from django.db.models import Q
fro... | xchem/fragalysis-backend | api/security.py | .py | d4c09da88273a767 | 7.45 | 7 |
import re
import xml.etree.ElementTree as ET
from typing import Optional, Tuple
from django.conf import settings
from django.contrib.auth.models import User
from django.core.exceptions import ObjectDoesNotExist
from django.http import HttpResponse
from fragutils.utils.network_utils import canon_input
from rdkit import... | xchem/fragalysis-backend | api/utils.py | .py | d37d874da9f4dc1d | 7.45 | 7 |
"""Classes to override default OIDCAuthenticationBackend (Keycloak authentication)
"""
import logging
from django.conf import settings
from django.db import IntegrityError, transaction
from mozilla_django_oidc.auth import OIDCAuthenticationBackend
from requests.exceptions import HTTPError
from rest_framework.exception... | xchem/fragalysis-backend | fragalysis/auth.py | .py | 79b567d75855fda5 | 7.45 | 7 |
# Classes/Methods to override default OIDC Views (Keycloak authentication)
from django.conf import settings
from django.http import JsonResponse
from mozilla_django_oidc.views import OIDCLogoutView
def keycloak_logout(request):
"""Ths method is used to retrieve logout endpoint to also end the keycloak session as ... | xchem/fragalysis-backend | fragalysis/views.py | .py | 6d33f3a49860e26c | 7.45 | 7 |
from django.db import models
from viewer.models import SiteObservation, Target
class HotspotMap(models.Model):
"""
Django model for Hotspot Maps
"""
# The site
# prot_id = models.ForeignKey(Protein, on_delete=models.CASCADE)
site_observation = models.ForeignKey(SiteObservation, on_delete=mod... | xchem/fragalysis-backend | hotspots/models.py | .py | 9d1584f5439640be | 7.45 | 7 |
from django.db import models
from hypothesis.definitions import IntTypes, VectTypes
from viewer.models import Compound, SiteObservation, Target
class TargetResidue(models.Model):
"""Model to store residue information - to curate the probes"""
# The target it relates to
target_id = models.ForeignKey(Targ... | xchem/fragalysis-backend | hypothesis/models.py | .py | 24d95ab955017122 | 7.45 | 7 |
from contextlib import contextmanager
from datetime import datetime, timedelta, timezone
from typing import Any, Generator, Mapping, MutableMapping
from uuid import uuid4
from blinker import ANY
from flask import Flask, Request, current_app
from flask import session as cookie_session
from flask_login import LoginManag... | ONSdigital/eq-questionnaire-runner | app/authentication/authenticator.py | .py | d99f9b742ecf5156 | 7.52 | 10 |
from datetime import datetime, timedelta
from flask import current_app
from structlog import get_logger
from app.data_models.app_models import UsedJtiClaim
from app.helpers.uuid_helper import is_valid_uuid4
from app.storage.errors import ItemAlreadyExistsError
logger = get_logger()
class JtiTokenUsed(Exception):
... | ONSdigital/eq-questionnaire-runner | app/authentication/jti_claim_storage.py | .py | 973fe1836650bf64 | 7.52 | 10 |
from __future__ import annotations
from typing import Iterable, Iterator
from app.data_models.answer import Answer, AnswerDict
AnswerKeyType = tuple[str, str | None]
class AnswerStore:
"""
An object that stores and updates a collection of answers, ready for serialisation
via the Questionnaire Store.
... | ONSdigital/eq-questionnaire-runner | app/data_models/answer_store.py | .py | 1e3926416e9e8980 | 7.52 | 10 |
from typing import Iterable, MutableMapping
from app.data_models.progress import CompletionStatus, Progress, ProgressDict
from app.questionnaire.location import Location, SectionKey
from app.utilities.types import LocationType
class ProgressStore:
"""
An object that stores and updates references to sections ... | ONSdigital/eq-questionnaire-runner | app/data_models/progress_store.py | .py | e7ff2919a379d42c | 7.52 | 10 |
from dataclasses import asdict, dataclass
from typing import Iterable, Iterator, TypedDict, cast
class RelationshipDict(TypedDict, total=False):
list_item_id: str
to_list_item_id: str
relationship: str
@dataclass
class Relationship:
"""
Represents a relationship between two items.
"""
l... | ONSdigital/eq-questionnaire-runner | app/data_models/relationship_store.py | .py | 505ad949a614f226 | 7.52 | 10 |
from __future__ import annotations
from datetime import datetime
from flask import current_app
from jwcrypto.common import base64url_decode
from structlog import get_logger
from app.data_models.app_models import EQSession
from app.data_models.session_data import SessionData
from app.storage.storage_encryption import... | ONSdigital/eq-questionnaire-runner | app/data_models/session_store.py | .py | c9d48a8e994b9181 | 7.52 | 10 |
from __future__ import annotations
from functools import cached_property
from typing import Iterable, Mapping, MutableMapping
from werkzeug.datastructures import ImmutableDict
from app.utilities.make_immutable import make_immutable
from app.utilities.types import (
SupplementaryDataKeyType,
SupplementaryData... | ONSdigital/eq-questionnaire-runner | app/data_models/supplementary_data_store.py | .py | 63abd3d9d862aec4 | 7.52 | 10 |
from typing import Any, Sequence
from wtforms.fields.core import UnboundField
from app.forms.field_handlers.field_handler import FieldHandler
from app.forms.fields import (
MultipleSelectFieldWithDetailAnswer,
SelectFieldWithDetailAnswer,
)
from app.questionnaire.dynamic_answer_options import DynamicAnswerOpt... | ONSdigital/eq-questionnaire-runner | app/forms/field_handlers/select_handlers.py | .py | b2e87491eb1dbae9 | 7.52 | 10 |
from decimal import Decimal, InvalidOperation
from typing import Any, Sequence
from wtforms import DecimalField
from app.helpers.form_helpers import sanitise_number
class DecimalFieldWithSeparator(DecimalField):
"""
The default wtforms field coerces data to an number and raises
cast errors outside of it... | ONSdigital/eq-questionnaire-runner | app/forms/fields/decimal_field_with_separator.py | .py | 57a3b6535438e051 | 7.52 | 10 |
from typing import Any, Sequence
from wtforms import IntegerField
from app.helpers.form_helpers import sanitise_number
class IntegerFieldWithSeparator(IntegerField):
"""
The default wtforms field coerces data to an int and raises
cast errors outside of it's validation chain. In order to stop
the val... | ONSdigital/eq-questionnaire-runner | app/forms/fields/integer_field_with_separator.py | .py | c2e44558799af804 | 7.52 | 10 |
"""
Read from a geo raster the heights for sites using UTM coordinates
"""
import sys
import rasterio as rio
from odmf import db
from odmf.tools import Path as OPath
class RasterReader:
"""
A simple wrapper for raster data for easy access of data
Usage:
>>>dem = RasterReader('test.tif')
>>>print... | jlu-ilr-hydro/odmf | bin/demreader.py | .py | 873753fb039691c7 | 7.42 | 6 |
"""
Imports a PostgreSQL dump into sqlite db for test puroposes
1) make a new odmf instance with `odmf configure` / `odmf db-create`
2) In an interactive session with the source instance run `export_all_tables` to create parquet files for each table
3)
"""
import pandas as pd
from odmf import db
from pathlib import P... | jlu-ilr-hydro/odmf | bin/psql2sqlite.py | .py | fb58f2e56457e3c1 | 7.42 | 6 |
import tables
import pandas as pd
from odmf import db
from sqlalchemy.types import JSON
from sqlalchemy.sql.selectable import Select
import time
from typing import Optional
def now(ago=None):
if ago is None:
return pd.to_datetime('now')
else:
ago = pd.to_timedelta(ago)
return pd.to_dat... | jlu-ilr-hydro/odmf | bin/to_hdf.py | .py | a275823aed3ad9c6 | 7.42 | 6 |
# Parse conf.py in the root directory and check for validity
#
# A more detailed explanation of a valid configuration can be found
# in the documentation
#
import yaml
from pathlib import Path
import sys
import os
from logging import getLogger
from . import prefix, __version__
logger = getLogger(__name__)
class C... | jlu-ilr-hydro/odmf | odmf/config.py | .py | 33875d09e02d2528 | 7.42 | 6 |
"""
Reads a table with lab data using a configuration file (in yaml format)
Example config file:
"""
import typing
import pandas as pd
from .. import db
from ..tools import Path
from .parquet_import import addrecords_dataframe
from .sample_parser import SampleParser
import yaml
example=r"""
driver: read_excel # pan... | jlu-ilr-hydro/odmf | odmf/dataimport/lab_import.py | .py | 754e693cbaff9451 | 7.42 | 6 |
from .base import ImportDescription, ImportColumn
import typing
from .. import db
import pandas as pd
import re
import datetime
from ..config import conf
from odmf.tools import Path
from logging import getLogger
logger = getLogger(__name__)
class DataImportError(RuntimeError):
...
class ColumnDataset:
"""
... | jlu-ilr-hydro/odmf | odmf/dataimport/pandas_import.py | .py | 1034247500ab1387 | 7.42 | 6 |
#!/usr/bin/env python3
"""
Imports parquet file in the record table format into the database, perfoming a couple of checks
Philipp Kraft 2022-06-23
"""
import logging
import pandas as pd
from odmf import db
logger = logging.getLogger(__name__)
def _adjust_columns(df: pd.DataFrame):
"""
Adds and removes colu... | jlu-ilr-hydro/odmf | odmf/dataimport/parquet_import.py | .py | 4cbe6f5bd20f2223 | 7.42 | 6 |
import re
from datetime import datetime
"""
Tools to parse sample names into sites, datasets, datetime values etc.
The parser is defined using a yml file.
Example:
"""
example = r"""
pattern: (\w+?)_([0-9\.]+_[0-9]+\:[0-9]+)_?([\-\+]?[0-9\.]+)?
site:
group: 1
map:
F1: 137
F2: 147
F3: 201
B1: 123
... | jlu-ilr-hydro/odmf | odmf/dataimport/sample_parser.py | .py | 1df39f5489266071 | 7.42 | 6 |
import sqlalchemy as sql
import sqlalchemy.orm as orm
from datetime import datetime
from base64 import b64encode
from io import BytesIO
from PIL import Image as pil
from .base import Base
from ..tools.migrate_db import new_column
from logging import getLogger
logger = getLogger(__name__)
class Image(Base):
__tabl... | jlu-ilr-hydro/odmf | odmf/db/image.py | .py | 1954019cbb7a5770 | 7.42 | 6 |
import sqlalchemy as sql
import sqlalchemy.orm as orm
from datetime import datetime, timedelta
from traceback import format_exc as traceback
from functools import total_ordering
from itertools import chain
from sqlalchemy import ForeignKey
from sqlalchemy_json import NestedMutableJson
from typing import Optional, Lis... | jlu-ilr-hydro/odmf | odmf/db/message.py | .py | 0584156ad311a044 | 7.42 | 6 |
import sqlalchemy as sql
import sqlalchemy.orm as orm
from datetime import datetime, timedelta
import typing
import numpy as np
import pandas as pd
from dataclasses import dataclass
from .base import Base, newid
from .dataset import Dataset
from logging import getLogger
from .message import Topic
logger = getLogger(... | jlu-ilr-hydro/odmf | odmf/db/timeseries.py | .py | d0241eabbd43ef79 | 7.42 | 6 |
"""
A backend to create plots with matplotlib
Each backend needs to implement the function to_image(plot, format, dpi) and to_html(plot).
"""
import datetime
import io
from matplotlib.figure import Axes, Figure
from matplotlib.ticker import MaxNLocator
from matplotlib import pyplot as plt
import numpy as np
from .pl... | jlu-ilr-hydro/odmf | odmf/plot/draw_mpl.py | .py | 6117dc2300dd3d14 | 7.42 | 6 |
"""
Calculates a summary table for a specific timespan, starting from the latest date
"""
import typing
import datetime
import numpy as np
import pandas as pd
from .. import db
def summarize_item(
session, timespan: typing.Optional[pd.Timedelta]=None,
aggregate: str='mean',
name:str = '',
... | jlu-ilr-hydro/odmf | odmf/plot/summary_table.py | .py | 71f6a5e40e36b7b7 | 7.42 | 6 |
from glob import glob
import os
import os.path as op
import typing
import bcrypt
from ..config import conf
import pathlib
from contextlib import contextmanager
__all__ = ['mail', 'Path']
class Path:
def __init__(self, *path: str|typing.Self|pathlib.Path, absolute=False):
self.datapath = op.realpath(conf.... | jlu-ilr-hydro/odmf | odmf/tools/__init__.py | .py | 6c99681774fd3e54 | 7.42 | 6 |
import re
import pandas as pd
def parse_access_log(fn='access.log'):
"""
Reads the access log and returns a dataframe
:param fn:
:return:
"""
pattern = re.compile(r'([0-9\.]*) - (.*?) \[(.*?)\] \"(.*?)\" ([0-9]*) ([0-9\-]*) \"(.*?)\" \"(.*?)\"')
names = 'ip','user','date','request','status... | jlu-ilr-hydro/odmf | odmf/tools/check_login_time.py | .py | 8b375c27a7cbd9c6 | 7.42 | 6 |
from getpass import getpass
import logging
import sys
from typing import List
logger = logging.getLogger(__name__)
from .migrate_db import migrate as migrate_db
def create_all_tables() -> List[str]:
"""
Creates all database table necessary for the database from the codebase
:return: A list of
"""
... | jlu-ilr-hydro/odmf | odmf/tools/create_db.py | .py | f07e6afae591829d | 7.42 | 6 |
'''
Exports the climate datasets as one table with multiple columns
Created on 05.06.2013
@author: kraft-p
'''
import pandas as pd
import typing
import datetime
class DecadeMonthStart(pd._libs.tslibs.offsets.BaseOffset): # noqa
"""
A try to use decades as resample periods, based on this pandas question:
... | jlu-ilr-hydro/odmf | odmf/tools/exportdatasets.py | .py | aa24a39989e61e6f | 7.42 | 6 |
"""
This module provides functions to bulk import database objects from tabular data.
Mainly for sites and datasets, but eventually more like Users, Instruments, etc.
"""
import typing
import pandas as pd
import geopandas as gpd
from shapely import to_geojson
from pathlib import Path
import yaml
from .. import db
f... | jlu-ilr-hydro/odmf | odmf/tools/import_objects.py | .py | bb47cec4248c409d | 7.42 | 6 |
"""
A mail daemon thread. Runs together with the website and sends messages when they are due.
"""
import typing
from datetime import datetime, timedelta
from threading import Timer
import logging
from odmf.config import conf
from odmf.db import session_scope, Job, sql, flex_get, newid
from odmf.db.message import Mes... | jlu-ilr-hydro/odmf | odmf/tools/mail/maildaemon.py | .py | 9124ddb93cf24d78 | 7.42 | 6 |
#
# Copyright (C) 2019 CERN.
#
# inspirehep is free software; you can redistribute it and/or modify it under
# the terms of the MIT License; see LICENSE file for more details.
import structlog
from flask import current_app
from flask_login import current_user
from inspire_schemas.api import load_schema
from inspire_u... | inspirehep/inspirehep | backend/inspirehep/accounts/api.py | .py | 18fe11497ffcb00b | 7.66 | 20 |
#
# Copyright (C) 2019 CERN.
#
# inspirehep is free software; you can redistribute it and/or modify it under
# the terms of the MIT License; see LICENSE file for more details.
from functools import wraps
from flask import abort
from flask_login import current_user
from inspirehep.accounts.roles import Roles
def log... | inspirehep/inspirehep | backend/inspirehep/accounts/decorators.py | .py | be8fd98763dd4e43 | 7.66 | 20 |
#
# This file is part of Invenio.
# Copyright (C) 2016-2018 CERN.
#
# Invenio is free software; you can redistribute it and/or modify it
# under the terms of the MIT License; see LICENSE file for more details.
"""Drop CDS Table"""
import sqlalchemy as sa
from alembic import op
from sqlalchemy_utils import UUIDType
#... | inspirehep/inspirehep | backend/inspirehep/alembic/00e051bc08b2_drop_cds_table.py | .py | c973a530093adef1 | 7.66 | 20 |
#
# This file is part of Invenio.
# Copyright (C) 2016-2018 CERN.
#
# Invenio is free software; you can redistribute it and/or modify it
# under the terms of the MIT License; see LICENSE file for more details.
"""Add index to records authors table"""
from alembic import op
# revision identifiers, used by Alembic.
re... | inspirehep/inspirehep | backend/inspirehep/alembic/020b99d0beb7_add_index_to_records_authors_table.py | .py | fff58045015ef705 | 7.66 | 20 |
#
# This file is part of Invenio.
# Copyright (C) 2016-2018 CERN.
#
# Invenio is free software; you can redistribute it and/or modify it
# under the terms of the MIT License; see LICENSE file for more details.
"""add workflow_record_sources table"""
import sqlalchemy as sa
from alembic import op
from sqlalchemy.diale... | inspirehep/inspirehep | backend/inspirehep/alembic/0ae62076ae0c_add_workflow_record_sources_table.py | .py | ce5718cf98526358 | 7.66 | 20 |
#
# This file is part of Invenio.
# Copyright (C) 2016-2018 CERN.
#
# Invenio is free software; you can redistribute it and/or modify it
# under the terms of the MIT License; see LICENSE file for more details.
"""add journal_literature table"""
import sqlalchemy as sa
from alembic import op
from sqlalchemy_utils.type... | inspirehep/inspirehep | backend/inspirehep/alembic/0d1cf7c4501e_add_journal_literature_table.py | .py | 5625c92888fba21e | 7.66 | 20 |
#
# This file is part of Invenio.
# Copyright (C) 2016-2018 CERN.
#
# Invenio is free software; you can redistribute it and/or modify it
# under the terms of the MIT License; see LICENSE file for more details.
"""add students_advisors table"""
import sqlalchemy as sa
from alembic import op
from sqlalchemy.dialects im... | inspirehep/inspirehep | backend/inspirehep/alembic/232af38d2604_add_students_advisors_table.py | .py | 22e6662593df1d6b | 7.66 | 20 |
#
# This file is part of Invenio.
# Copyright (C) 2016-2018 CERN.
#
# Invenio is free software; you can redistribute it and/or modify it
# under the terms of the MIT License; see LICENSE file for more details.
"""add index to authors_records"""
from alembic import op
# revision identifiers, used by Alembic.
revision... | inspirehep/inspirehep | backend/inspirehep/alembic/2d7ea622feda_add_index_to_authors_records.py | .py | 47729478451190e9 | 7.66 | 20 |
#
# This file is part of Invenio.
# Copyright (C) 2016-2018 CERN.
#
# Invenio is free software; you can redistribute it and/or modify it
# under the terms of the MIT License; see LICENSE file for more details.
"""modify idx_object index in pidstore_pid table"""
from alembic import op
# revision identifiers, used by ... | inspirehep/inspirehep | backend/inspirehep/alembic/318758a589d5_modify_idx_object_index_in_pidstore_pid_.py | .py | 008e1bdc37ca2e95 | 7.66 | 20 |
#
# This file is part of Invenio.
# Copyright (C) 2016-2018 CERN.
#
# Invenio is free software; you can redistribute it and/or modify it
# under the terms of the MIT License; see LICENSE file for more details.
"""update primary key in students advisors"""
import sqlalchemy as sa
from alembic import op
# revision ide... | inspirehep/inspirehep | backend/inspirehep/alembic/35ba3d715114_update_primary_key_in_students_advisors.py | .py | f576c421acdd2809 | 7.66 | 20 |
#
# This file is part of Invenio.
# Copyright (C) 2016-2018 CERN.
#
# Invenio is free software; you can redistribute it and/or modify it
# under the terms of the MIT License; see LICENSE file for more details.
"""update values in AuthorSchemaType"""
from alembic import op
# revision identifiers, used by Alembic.
rev... | inspirehep/inspirehep | backend/inspirehep/alembic/3637cb5551a8_update_values_in_authorschematype.py | .py | 8be22261d0b39f6d | 7.66 | 20 |
#
# This file is part of Invenio.
# Copyright (C) 2016-2018 CERN.
#
# Invenio is free software; you can redistribute it and/or modify it
# under the terms of the MIT License; see LICENSE file for more details.
"""remove_legacy_records_mirror_table"""
import sqlalchemy as sa
from alembic import op
from sqlalchemy.dial... | inspirehep/inspirehep | backend/inspirehep/alembic/3fd6471bb960_remove_legacy_records_mirror_table.py | .py | f7b33b44ba7cf47b | 7.66 | 20 |
#
# This file is part of Invenio.
# Copyright (C) 2016-2018 CERN.
#
# Invenio is free software; you can redistribute it and/or modify it
# under the terms of the MIT License; see LICENSE file for more details.
"""Add CDSRun status model"""
import sqlalchemy as sa
from alembic import op
from sqlalchemy_utils import UU... | inspirehep/inspirehep | backend/inspirehep/alembic/412aeb064d68_add_cdsrun_status_model.py | .py | f2c2402b9090fe3d | 7.66 | 20 |
#
# This file is part of Invenio.
# Copyright (C) 2016-2018 CERN.
#
# Invenio is free software; you can redistribute it and/or modify it
# under the terms of the MIT License; see LICENSE file for more details.
"""Alter records_authors id to big_int"""
import sqlalchemy as sa
from alembic import op
# revision identif... | inspirehep/inspirehep | backend/inspirehep/alembic/41e81f8ee63a_alter_records_authors_id_to_big_int.py | .py | cfc48038750e5a4c | 7.66 | 20 |
#
# This file is part of Invenio.
# Copyright (C) 2016-2018 CERN.
#
# Invenio is free software; you can redistribute it and/or modify it
# under the terms of the MIT License; see LICENSE file for more details.
"""add_inspire_redirection_table"""
import sqlalchemy as sa
from alembic import op
revision = "49a436a179ac... | inspirehep/inspirehep | backend/inspirehep/alembic/49a436a179ac_add_inspire_redirection_table.py | .py | f2ce082cfd92753d | 7.66 | 20 |
#
# This file is part of Invenio.
# Copyright (C) 2016-2018 CERN.
#
# Invenio is free software; you can redistribute it and/or modify it
# under the terms of the MIT License; see LICENSE file for more details.
"""Data collection citations"""
import sqlalchemy as sa
import sqlalchemy_utils
from alembic import op
# re... | inspirehep/inspirehep | backend/inspirehep/alembic/503b34c08b0b_data_collection_citations.py | .py | 23623727f084aae1 | 7.66 | 20 |
#
# Copyright (C) 2019 CERN.
#
# inspirehep is free software; you can redistribute it and/or modify it under
# the terms of the MIT License; see LICENSE file for more details.
"""Add authors to records table and update index on records_citations"""
import sqlalchemy as sa
from alembic import op
from inspirehep.record... | inspirehep/inspirehep | backend/inspirehep/alembic/595c36d68964_add_authors_to_records_table_and_update_.py | .py | 2bbd4c70a07e5662 | 7.66 | 20 |
#
# This file is part of Invenio.
# Copyright (C) 2016-2018 CERN.
#
# Invenio is free software; you can redistribute it and/or modify it
# under the terms of the MIT License; see LICENSE file for more details.
"""Add is_self_citation column to citation_table"""
import sqlalchemy as sa
from alembic import op
# revisi... | inspirehep/inspirehep | backend/inspirehep/alembic/5a0e2405b624_add_citation_type_to_citation_table.py | .py | 6c380003127954cc | 7.66 | 20 |
#
# This file is part of Invenio.
# Copyright (C) 2016-2018 CERN.
#
# Invenio is free software; you can redistribute it and/or modify it
# under the terms of the MIT License; see LICENSE file for more details.
"""Add lecacy_records_mirror table"""
import sqlalchemy as sa
from alembic import op
# revision identifiers... | inspirehep/inspirehep | backend/inspirehep/alembic/5ce9ef759ace_add_lecacy_records_mirror_table.py | .py | 1c8f85b8297f00ae | 7.66 | 20 |
#
# This file is part of Invenio.
# Copyright (C) 2016-2018 CERN.
#
# Invenio is free software; you can redistribute it and/or modify it
# under the terms of the MIT License; see LICENSE file for more details.
"""update constraints in records_authors"""
from alembic import op
# revision identifiers, used by Alembic.... | inspirehep/inspirehep | backend/inspirehep/alembic/72d010d89702_update_constraints_in_records_authors.py | .py | 364615d4da613e8c | 7.66 | 20 |
#
# This file is part of Invenio.
# Copyright (C) 2016-2018 CERN.
#
# Invenio is free software; you can redistribute it and/or modify it
# under the terms of the MIT License; see LICENSE file for more details.
"""remove pid_provider index from pidstore"""
from alembic import op
# revision identifiers, used by Alembi... | inspirehep/inspirehep | backend/inspirehep/alembic/788a3a61a635_remove_pid_provider_index_from_pidstore.py | .py | 802d1af15fab8752 | 7.66 | 20 |
#
# Copyright (C) 2019 CERN.
#
# inspirehep is free software; you can redistribute it and/or modify it under
# the terms of the MIT License; see LICENSE file for more details.
"""Inspirehep initial revision of migrations
which makes db identical like in inspire-next"""
# revision identifiers, used by Alembic.
revisio... | inspirehep/inspirehep | backend/inspirehep/alembic/7be4c8b5c5e8_inspirehep_new_migrations.py | .py | 663cf8987cd25ef9 | 7.66 | 20 |
#
# Copyright (C) 2019 CERN.
#
# inspirehep is free software; you can redistribute it and/or modify it under
# the terms of the MIT License; see LICENSE file for more details.
"""Add indexed to records_citations on is_self_citation column"""
from alembic import op
revision = "8ba47044154a"
down_revision = "5a0e2405b... | inspirehep/inspirehep | backend/inspirehep/alembic/8ba47044154a_add_indexed_to_records_citations_on_is_.py | .py | 3b484309a0f701a4 | 7.66 | 20 |
#
# This file is part of Invenio.
# Copyright (C) 2016-2018 CERN.
#
# Invenio is free software; you can redistribute it and/or modify it
# under the terms of the MIT License; see LICENSE file for more details.
"""add experiment_literature table"""
import sqlalchemy as sa
from alembic import op
from sqlalchemy_utils.... | inspirehep/inspirehep | backend/inspirehep/alembic/afe5f484abcc_add_experiments_literature_table.py | .py | e7c339cac0068fb7 | 7.66 | 20 |
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