text stringlengths 185 73.3k | repo stringlengths 7 100 | path stringlengths 4 146 | language stringclasses 7
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# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under th... | AI4SIM/model-collection | weather-forecast/ecrad-3d-correction/unets/tests/test_dataproc.py | .py | 349b095661643d2f | 8.12 | 16 |
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under th... | AI4SIM/model-collection | weather-forecast/ecrad-3d-correction/unets/tests/test_models.py | .py | 2cbfb54e12d8bec1 | 8.12 | 16 |
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under th... | AI4SIM/model-collection | weather-forecast/ecrad-3d-correction/unets/tests/test_unet.py | .py | 201a3b40876ac49c | 8.12 | 16 |
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under th... | AI4SIM/model-collection | weather-forecast/ecrad-3d-correction/unets/unet.py | .py | a2d89afb8834f9ef | 7.62 | 16 |
"""This module proposes Pytorch style Dataset classes for the gwd use-case."""
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless req... | AI4SIM/model-collection | weather-forecast/gravity-wave-drag/cnns/data.py | .py | 55a695d4c8b22758 | 7.62 | 16 |
import asyncio
import logging
import socket
from datetime import datetime, timedelta
from typing import Optional
class Mutex:
"""A simple mutex mechanism to prevent concurrent synchronization to the same target host."""
DEFAULT_FILEPATH = '~/.livesync_mutex'
def __init__(self, host: str, port: int) -> No... | zauberzeug/livesync | livesync/mutex.py | .py | 08a670df9ee685d1 | 7.66 | 20 |
"""Translate ``.syncignore`` patterns into rsync filter rules, supporting negation (!) prefixes."""
from typing import List
def get_rsync_filter_rules(patterns: List[str]) -> List[str]:
"""Convert .syncignore patterns to rsync filter rules.
Rules are emitted in reverse .syncignore order so rsync's first-matc... | zauberzeug/livesync | livesync/syncignore.py | .py | 131c06940ca45cb2 | 7.66 | 20 |
from datetime import datetime
from typing import Any, Optional
import pendulum
from sqlalchemy import DateTime, TypeDecorator
utc = pendulum.tz.timezone("UTC")
class UtcDateTime(TypeDecorator): # type: ignore[type-arg]
"""
Almost equivalent to :class:`~sqlalchemy.types.DateTime` with
``timezone=True`` ... | Jorricks/DutyBoard | duty_board/alchemy/sqlalchemy_types.py | .py | 90eb8fe6a81328c4 | 7.52 | 10 |
import os
from logging.config import fileConfig
from alembic import context
from sqlalchemy import create_engine
from duty_board.alchemy.settings import Base
from duty_board.models.calendar import Calendar
from duty_board.models.on_call_event import OnCallEvent
from duty_board.models.person import Person
from duty_bo... | Jorricks/DutyBoard | duty_board/alembic/env.py | .py | ea7f03618869807f | 7.52 | 10 |
"""initial version
Revision ID: 9af1232f6bc0
Revises:
Create Date: 2023-11-28 11:13:26.408554
"""
from typing import Sequence, Union
import sqlalchemy as sa
from alembic import op
from duty_board.alchemy.sqlalchemy_types import UtcDateTime
# revision identifiers, used by Alembic.
revision: str = "9af1232f6bc0"
dow... | Jorricks/DutyBoard | duty_board/alembic/versions/2023_11_28_1113-9af1232f6bc0_initial_version.py | .py | 3e53b8af458771ca | 7.52 | 10 |
"""Add field to contain extra information of a Calendar
Revision ID: 2e1f3badfabe
Revises: 9af1232f6bc0
Create Date: 2024-08-31 12:20:01.752969
"""
from typing import Sequence, Union
import sqlalchemy as sa
from alembic import op
# revision identifiers, used by Alembic.
revision: str = "2e1f3badfabe"
down_revision:... | Jorricks/DutyBoard | duty_board/alembic/versions/2024_08_31_1220-2e1f3badfabe_add_field_to_contain_extra_information_.py | .py | 8f5986d015019812 | 7.52 | 10 |
from typing import TYPE_CHECKING
from pendulum.datetime import DateTime
from sqlalchemy import ForeignKey, Integer, String
from sqlalchemy.orm import Mapped, mapped_column, relationship
from duty_board.alchemy.settings import Base
from duty_board.alchemy.sqlalchemy_types import UtcDateTime
from duty_board.models.cale... | Jorricks/DutyBoard | duty_board/models/on_call_event.py | .py | 9f267042fd319d25 | 7.52 | 10 |
import datetime
import logging
from abc import ABC, abstractmethod
from pathlib import Path
from typing import Any, ClassVar, List, Optional, Set
from sqlalchemy.orm import Session as SASession
from duty_board.models.calendar import Calendar
from duty_board.models.person import Person
from duty_board.plugin.helpers.d... | Jorricks/DutyBoard | duty_board/plugin/abstract_plugin.py | .py | d384d563f8e13e5d | 7.52 | 10 |
import logging
from typing import List, Optional, Tuple
import pytz
import requests
from ical_library import client
from ical_library.help_modules import dt_utils
from ical_library.ical_components.v_calendar import VCalendar
from ical_library.ical_components.v_event import VEvent
from ical_library.timeline import Time... | Jorricks/DutyBoard | duty_board/plugin/ical_plugin_mixin.py | .py | bffdc14a7433ad72 | 7.52 | 10 |
import asyncio
import io
import json
import logging
import os
from typing import (
Any,
ClassVar,
Dict,
List,
Mapping,
Optional,
Tuple,
Union,
)
from ldap3.core.exceptions import LDAPExceptionError
from PIL import Image
from sqlalchemy.orm import Session as SASession
from duty_board.mo... | Jorricks/DutyBoard | duty_board/plugin/ldap_plugin_mixin.py | .py | ac773a83717d665a | 7.52 | 10 |
#!/usr/bin/env python
import time
from mininet.net import Mininet
from mininet.log import setLogLevel
from future import standard_library
standard_library.install_aliases()
from subprocess import call as subprocess_call # noqa: E402
def call(args):
subprocess_call(args, shell=True)
def wait_for_cmd_output(hos... | bobuhiro11/mininetlab | mininetlab/ovs_srv6.py | .py | a41dc29b1adc45fa | 7.65 | 19 |
import re
import m2r2
def read(fname):
"""Read a file."""
return open(fname).read()
def absolute_links(txt):
"""Replace relative petab github links by absolute links."""
repo = "petab-dev/libpetab-python"
raw_base = f"(https://raw.githubusercontent.com/{repo}/master/"
embedded_base = f"(htt... | PEtab-dev/libpetab-python | doc/md2rst.py | .py | 799c8519070726fd | 7.63 | 17 |
#!/usr/bin/env python3
"""Command line tool to check for correct format"""
import argparse
import logging
import sys
import typing
import pydantic
from colorama import Fore
from colorama import init as init_colorama
from jsonschema.exceptions import ValidationError as SchemaValidationError
import petab.v1 as petab
... | PEtab-dev/libpetab-python | petab/petablint.py | .py | 2d882e7c957a056d | 7.63 | 17 |
"""Functions performing various calculations."""
import numbers
import operator
from functools import reduce
import numpy as np
import pandas as pd
import sympy as sp
import petab.v1 as petab
from .C import *
from .math import sympify_petab
__all__ = [
"calculate_chi2",
"calculate_chi2_for_table_from_resid... | PEtab-dev/libpetab-python | petab/v1/calculate.py | .py | 1b3da582249d1329 | 7.63 | 17 |
"""PEtab problems consisting of multiple models"""
import os
import pandas as pd
from . import parameters, problem, yaml
from .C import *
__all__ = ["CompositeProblem"]
class CompositeProblem:
"""Representation of a PEtab problem consisting of multiple models
Attributes:
problems:
Lis... | PEtab-dev/libpetab-python | petab/v1/composite_problem.py | .py | 8eff0d0bc5d9b3fe | 7.63 | 17 |
"""Functions operating on the PEtab condition table"""
from collections.abc import Iterable
from pathlib import Path
import numpy as np
import pandas as pd
from . import core, lint
from .C import *
__all__ = [
"create_condition_df",
"get_condition_df",
"get_parametric_overrides",
"write_condition_df... | PEtab-dev/libpetab-python | petab/v1/conditions.py | .py | faab5eb4b8ff2bb6 | 7.63 | 17 |
"""PEtab core functions (or functions that don't fit anywhere else)"""
import logging
import os
import re
from collections.abc import Callable, Iterable, Sequence
from pathlib import Path
from typing import (
Any,
)
from warnings import warn
import numpy as np
import pandas as pd
from pandas.api.types import is_s... | PEtab-dev/libpetab-python | petab/v1/core.py | .py | 512a1d10814b4e2b | 7.63 | 17 |
"""Functionality related to the PEtab entity mapping table"""
# TODO: Move to petab.v2.mapping
from pathlib import Path
import pandas as pd
from . import lint
from .C import *
from .models import Model
__all__ = [
"check_mapping_df",
"get_mapping_df",
"resolve_mapping",
"write_mapping_df",
]
def g... | PEtab-dev/libpetab-python | petab/v1/mapping.py | .py | da1a64105c9183e2 | 7.63 | 17 |
"""PEtab-math to sympy conversion."""
import sympy as sp
from sympy.logic.boolalg import Boolean, BooleanFalse, BooleanTrue
from ._generated.PetabMathExprParser import PetabMathExprParser
from ._generated.PetabMathExprParserVisitor import PetabMathExprParserVisitor
__all__ = ["MathVisitorSympy"]
# Mappings of PEtab... | PEtab-dev/libpetab-python | petab/v1/math/SympyVisitor.py | .py | b1e34c362070a34f | 7.63 | 17 |
"""A PEtab-compatible sympy string-printer."""
import typing
from itertools import chain, islice
import sympy as sp
from sympy.printing.str import StrPrinter
__all__ = ["PetabStrPrinter", "petab_math_str"]
class PetabStrPrinter(StrPrinter):
"""A PEtab-compatible sympy string-printer."""
#: Mapping of symp... | PEtab-dev/libpetab-python | petab/v1/math/printer.py | .py | 4e23fd5f90e0244d | 7.63 | 17 |
"""PEtab math to sympy conversion."""
import numpy as np
import sympy as sp
from antlr4 import CommonTokenStream, InputStream
from antlr4.error.ErrorListener import ErrorListener
from . import petab_math_str
from ._generated.PetabMathExprLexer import PetabMathExprLexer
from ._generated.PetabMathExprParser import Peta... | PEtab-dev/libpetab-python | petab/v1/math/sympify.py | .py | 6f0ab482452aa1dd | 7.63 | 17 |
"""Functions operating on the PEtab measurement table"""
import itertools
import math
import numbers
from pathlib import Path
import numpy as np
import pandas as pd
from . import core, lint, observables
from .C import *
__all__ = [
"assert_overrides_match_parameter_count",
"create_measurement_df",
"get_... | PEtab-dev/libpetab-python | petab/v1/measurements.py | .py | 9233e20d2cf0878e | 7.63 | 17 |
"""BNGL (BioNetGen Language) model support for PEtab.
Adds a ``bngl`` model type, so a PEtab problem declaring ``language: bngl``
can be loaded and validated.
:class:`BnglModel` is backed by :func:`parse_bngl`, a small, dependency-free
BNGL reader. It only reads a model's declared entities -- parameters,
observables,... | PEtab-dev/libpetab-python | petab/v1/models/bngl_model.py | .py | bb5fe162b9496ed3 | 7.63 | 17 |
"""Functions for handling PySB models"""
from __future__ import annotations
import itertools
import re
import sys
from collections.abc import Iterable
from pathlib import Path
from typing import Any
import pysb
from ..._utils import _generate_path
from .. import is_valid_identifier
from . import MODEL_TYPE_PYSB
fro... | PEtab-dev/libpetab-python | petab/v1/models/pysb_model.py | .py | 2be5cdeb979f104a | 7.63 | 17 |
"""Functions for handling SBML models"""
from __future__ import annotations
import itertools
from collections.abc import Iterable
from pathlib import Path
import libsbml
import sympy as sp
from sbmlmath import sbml_math_to_sympy
from ..._utils import _generate_path
from ..sbml import (
get_sbml_model,
is_sb... | PEtab-dev/libpetab-python | petab/v1/models/sbml_model.py | .py | 2eade80bcba1fe38 | 7.63 | 17 |
"""Functions for working with the PEtab observables table"""
import re
from collections import OrderedDict
from pathlib import Path
from typing import Literal
import pandas as pd
from . import core, lint
from .C import *
from .math import sympify_petab
from .models import Model
__all__ = [
"create_observable_df... | PEtab-dev/libpetab-python | petab/v1/observables.py | .py | ea6dd0a8d5603ce3 | 7.63 | 17 |
"""Functions related to prior handling."""
from __future__ import annotations
import copy
from typing import Literal
import numpy as np
import pandas as pd
from ..v1.C import PREEQUILIBRATION_CONDITION_ID
from . import (
ESTIMATE,
LAPLACE,
LIN,
LOG,
LOG10,
LOG_LAPLACE,
LOG_NORMAL,
ME... | PEtab-dev/libpetab-python | petab/v1/priors.py | .py | 96c52d607c48bbde | 7.63 | 17 |
"""Functions related to parameter sampling"""
from collections.abc import Sequence
import numpy as np
import pandas as pd
from .C import *
__all__ = ["sample_from_prior", "sample_parameter_startpoints"]
def sample_from_prior(
prior: tuple[str, list, str, list], n_starts: int
) -> np.array:
"""Creates samp... | PEtab-dev/libpetab-python | petab/v1/sampling.py | .py | eaf8e759a36aaa5a | 7.63 | 17 |
"""Functions for interacting with SBML models"""
import contextlib
import logging
from numbers import Number
from pathlib import Path
from warnings import warn
import libsbml
from pandas.io.common import get_handle, is_file_like, is_url
import petab.v1 as petab
logger = logging.getLogger(__name__)
__all__ = [
"... | PEtab-dev/libpetab-python | petab/v1/sbml.py | .py | 44769698ce32b95c | 7.63 | 17 |
"""Functionality for simplifying PEtab problems"""
from math import nan
import pandas as pd
import petab.v1 as petab
from . import Problem
from .C import *
from .lint import lint_problem
__all__ = [
"condition_parameters_to_parameter_table",
"remove_nan_measurements",
"remove_unused_conditions",
"r... | PEtab-dev/libpetab-python | petab/v1/simplify.py | .py | 8d9c65e1b29e3123 | 7.63 | 17 |
"""PEtab simulator base class and related functions."""
from __future__ import annotations
import abc
import pathlib
import shutil
import tempfile
from warnings import warn
import numpy as np
import pandas as pd
import sympy as sp
import petab.v1 as petab
__all__ = ["Simulator", "sample_noise"]
class Simulator(a... | PEtab-dev/libpetab-python | petab/v1/simulate.py | .py | fd1e2f875bb64b0c | 7.63 | 17 |
"""
Functions for creating an overview report of a PEtab problem
"""
from pathlib import Path
from shutil import copyfile
import pandas as pd
import petab.v1 as petab
from petab.v1.C import (
MEASUREMENT,
OBSERVABLE_ID,
PREEQUILIBRATION_CONDITION_ID,
SIMULATION_CONDITION_ID,
)
__all__ = ["create_rep... | PEtab-dev/libpetab-python | petab/v1/visualize/data_overview.py | .py | 144e77208de50129 | 7.63 | 17 |
"""
This file should contain the functions, which PEtab internally needs for
plotting, but which are not meant to be used by non-developers and should
hence not be directly visible/usable when using `import petab.visualize`.
"""
import pandas as pd
from ..C import *
# for typehints
IdsList = list[str]
NumList = list... | PEtab-dev/libpetab-python | petab/v1/visualize/helper_functions.py | .py | 4601abab9ff07a8b | 7.63 | 17 |
"""Validation of PEtab visualization files"""
from __future__ import annotations
import logging
import pandas as pd
from .. import C, Problem
from ..C import VISUALIZATION_DF_REQUIRED_COLS
logger = logging.getLogger(__name__)
__all__ = ["validate_visualization_df"]
def validate_visualization_df(problem: Problem... | PEtab-dev/libpetab-python | petab/v1/visualize/lint.py | .py | 8759e66403280ef9 | 7.63 | 17 |
"""Code regarding the PEtab YAML config files"""
from __future__ import annotations
import os
from pathlib import Path, PurePosixPath
from typing import Any
from urllib.parse import unquote, urlparse, urlunparse
import jsonschema
import numpy as np
import pandas as pd
import yaml
from pandas.io.common import get_han... | PEtab-dev/libpetab-python | petab/v1/yaml.py | .py | 0398534da6db5d25 | 7.63 | 17 |
# SPDX-FileCopyrightText: 2025 European Centre for Medium-Range Weather Forecasts (ECMWF)
# SPDX-License-Identifier: Apache-2.0
"""Utilities to work with climatologies.
.. seealso:: :py:mod:`earthkit.transforms.climatology`
"""
from dataclasses import dataclass
from typing import Literal, Optional
import numpy as n... | ecmwf/earthkit-climate | src/earthkit/climate/utils/climatology.py | .py | e3b9c4664785592d | 7.42 | 6 |
# SPDX-FileCopyrightText: 2025 European Centre for Medium-Range Weather Forecasts (ECMWF)
# SPDX-License-Identifier: Apache-2.0
"""Shared Pytest fixtures for integration tests."""
from contextlib import nullcontext
from typing import Any, Callable, Optional
import earthkit.data as ekd
import pytest
import xarray as ... | ecmwf/earthkit-climate | tests/integration/conftest.py | .py | 4ce7f2488dbaee6a | 7.92 | 6 |
# SPDX-FileCopyrightText: 2025 European Centre for Medium-Range Weather Forecasts (ECMWF)
# SPDX-License-Identifier: Apache-2.0
import numpy as np
import pytest
import xarray as xr
import earthkit.climate as ekc
@pytest.mark.parametrize("frequency", ["season", "month", "dayofyear"])
def test_upsample_scalar_fails_w... | ecmwf/earthkit-climate | tests/unit/utils/test_climatology.py | .py | 23b1a1f4cf0cefaa | 7.92 | 6 |
# pylint: disable=import-error
"""
Show information about a specific user based on the user's query
Functions:
user_info(query: str) -> str
calculate_lucky_no(birthday: str) -> str
Author: @dilshan-h (https://github.com/dilshan-h)
"""
from functools import lru_cache
import os
import csv
from cryptography.fe... | Dilshan-H/bla-bot | about_user.py | .py | 3935b877d667dbfc | 7.5 | 9 |
# pylint: disable=line-too-long import-error
"""
Get GPA values from results.csv for all users and filter according to the request
Functions:
get_gpa(user_id: str, step: int) -> List[str]
calculate_gpa(user_nic: str) -> str
academic_status(cgpa: float) -> str
Author: @dilshan-h (https://github.com/dilsh... | Dilshan-H/bla-bot | gpa_values.py | .py | 78cfe80f3022b241 | 7.5 | 9 |
# pylint: disable=import-error
"""
Get birthdays for a specific date from a CSV file and return wishes for each user with a random text
Functions:
get_birthdays() -> List[str]
Author: @dilshan-h (https://github.com/dilshan-h)
"""
import os
from typing import List
import csv
from datetime import datetime
from ra... | Dilshan-H/bla-bot | manage_bdays.py | .py | 30f8ca0f23ae8a0e | 7.5 | 9 |
import asyncio
import pytest
from arclet.letoderea.effect import EffectManager
from arclet.letoderea.utils import DisposableList
def test_disposable_list():
objects = [lambda: None for _ in range(5)]
dl = DisposableList(objects[:3])
assert len(dl) == 3
dispose1 = dl.append(objects[3])
assert le... | ArcletProject/Letoderea | tests/test_effect.py | .py | aed58a44508e57ad | 7.02 | 10 |
# abcp.py
"""
Модуль работы с ABCP API.
Поиск товаров через операцию search/batch.
"""
import time
import hashlib
import requests
from utils import (
chunked,
safe_float,
safe_int
)
class ABCPClient:
"""
Клиент для работы с ABCP API.
"""
def __init__(self, host: str, login: str... | maxexplorer/ParserProject | autoparts_api_prices/abcp.py | .py | 85996e4460755911 | 7.45 | 7 |
# autotrade.py
"""
Модуль работы с Autotrade API.
Получение цен и остатков товаров
через метод getStocksAndPrices.
"""
import time
import json
import hashlib
import requests
from utils import (
chunked,
safe_float,
safe_int
)
class AutotradeClient:
"""
Клиент для работы с Autotrade API.
"... | maxexplorer/ParserProject | autoparts_api_prices/autotrade.py | .py | 6e63f573023e5aa0 | 7.45 | 7 |
# froza_client.py
"""
Модуль работы с Froza XML API.
Поиск товаров через search_xml4.php (price_list).
"""
import time
import xml.etree.ElementTree as ET
import requests
from utils import (
safe_float,
safe_int
)
class FrozaClient:
"""
Клиент для работы с Froza API.
"""
def __init__(self... | maxexplorer/ParserProject | autoparts_api_prices/froza_client.py | .py | bb642fb036f0731a | 7.45 | 7 |
import os
import glob
import pandas as pd
def process_excel_file(path: str) -> dict:
"""
Parses the invoice into two blocks:
1) summary: totals from item rows
2) serials: article + serial rows, with blanks for items without serial details
"""
df: pd.DataFrame = pd.read_excel(path, header=None)... | maxexplorer/ParserProject | autoparts_info_excel/main.py | .py | 0ed644d4df5ecbc4 | 7.45 | 7 |
import os
from datetime import datetime
from openpyxl import load_workbook, Workbook
def read_old_articles_data(old_articles_file):
"""Чтение данных из файла 'старые артикулы.xlsx'"""
wb = load_workbook(old_articles_file)
ws = wb.active
articles_dict = {}
for row in ws.iter_rows(min_row=2, max_c... | maxexplorer/ParserProject | autoparts_prices_update/main.py | .py | b1c1b698e9da2607 | 7.45 | 7 |
# parser.py
import re
from aiogram import Bot
from telethon import events
from telegram_client import get_client
class TelegramKeywordParser:
def __init__(self, keywords, stopwords, chats, bot: Bot, chat_id, exceptions, print_dialogs=False):
self.keywords = [kw.lower() for kw in keywords]
self.... | maxexplorer/ParserProject | chat_parser_app/parser.py | .py | 3969df7269c20f4e | 7.45 | 7 |
import os
import re
import glob
import warnings
import requests
import pandas as pd
from datetime import datetime
from bs4 import BeautifulSoup, XMLParsedAsHTMLWarning
from concurrent.futures import ThreadPoolExecutor, as_completed
from requests.exceptions import RequestException, SSLError
warnings.filterwarnings("ig... | maxexplorer/ParserProject | check_website/main.py | .py | 64f4d4cb1915b09e | 7.45 | 7 |
import time
from datetime import datetime
import os
import random
import requests
from bs4 import BeautifulSoup
from pandas import DataFrame, ExcelWriter
start_time = datetime.now()
headers = {
'Accept': '*/*',
'User-Agent': 'Mozilla/5.0 (Windows NT 10.0; Win64; x64) AppleWebKit/537.36'
' ... | maxexplorer/ParserProject | chyi_site/main.py | .py | d0d1ebd944bfba80 | 7.45 | 7 |
# command_processor.py
from macros import macros, command_map
class CommandProcessor:
"""
Класс для обработки команд CSV и генерации блоков G-кода.
Атрибуты:
blocks (List[str]): Список строк G-кода для текущей строки CSV.
commands_in_row (List[str]): Список обработанных команд в строке.
... | maxexplorer/ParserProject | csv_gcode/command_processor.py | .py | f76cab135255e06c | 7.45 | 7 |
# processor.py
import os
import csv
import glob
from typing import List, Tuple
from data import gcode_header
from macros import command_map
from command_processor import CommandProcessor
def process_all_csv(folder: str, output_folder: str) -> None:
"""
Обрабатывает все CSV-файлы в указанной папке и сохраняе... | maxexplorer/ParserProject | csv_gcode/processor.py | .py | 628a9bb38be9ef09 | 7.45 | 7 |
import json
from typing import Any, ClassVar, Optional
class ApiException(Exception):
"""The API Exception that is thrown by the Caplena REST API.
:param type: The type of the error returned.
:param code: A short string that uniquely identifies the reason for this error.
Useful for programmatic e... | caplena/caplena-python | caplena/api/api_exception.py | .py | 54753bee696b235e | 7.48 | 8 |
from typing import Type, Union
from caplena.api import ApiBaseUri, ApiVersion
from caplena.configuration import Configuration
from caplena.controllers import ProjectsController
from caplena.http.http_client import HttpClient, HttpRetry
from caplena.http.requests_http_client import RequestsHttpClient
from caplena.loggi... | caplena/caplena-python | caplena/client.py | .py | 649d61beead6f9de | 7.48 | 8 |
from typing import Any, Dict
class DuplicatedTopicsError(Exception):
"""Exception that is thrown when there are two or more topics with identical names
provided for TTACell.
:param message: A brief human-readable message providing more details about the error
that has occurred. Please note that e... | caplena/caplena-python | caplena/errors.py | .py | c24e68a70a070cf6 | 7.48 | 8 |
import os
import shutil
from libtiff import TIFF # pip install libtiff
from scipy import misc
import random
def tif2png(_src_path, _dst_path):
"""
Usage:
formatting `tif/tiff` files to `jpg/png` files
:param _src_path:
:param _dst_path:
:return:
"""
tif = TIFF.ope... | xiaolanshu/CSCA-U-Net | utils/format_conversion.py | .py | 10803cc891953d99 | 7.62 | 16 |
import torch
import numpy as np
from thop import profile
from thop import clever_format
def clip_gradient(optimizer, grad_clip):
"""
For calibrating misalignment gradient via cliping gradient technique
:param optimizer:
:param grad_clip:
:return:
"""
for group in optimizer.par... | xiaolanshu/CSCA-U-Net | utils/utils.py | .py | b626f51ccef7a044 | 7.62 | 16 |
#!/usr/bin/env python3
# MIT License
#
# Copyright (c) 2020 FABRIC Testbed
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
# to ... | fabric-testbed/fabrictestbed-extensions | fabrictestbed_extensions/editors/abc_topology_editor.py | .py | 481ce49b5b09ce41 | 8 | 9 |
#!/usr/bin/env python3
# MIT License
#
# Copyright (c) 2020 FABRIC Testbed
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
# to ... | fabric-testbed/fabrictestbed-extensions | fabrictestbed_extensions/editors/cytoscape_topology_editor.py | .py | fdf001ebc158d48d | 8 | 9 |
#!/usr/bin/env python3
# MIT License
#
# Copyright (c) 2020 FABRIC Testbed
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
# to ... | fabric-testbed/fabrictestbed-extensions | fabrictestbed_extensions/fablib/artifact.py | .py | 1b786741c2961fef | 8 | 9 |
"""Custom exception types for FABlib.
All exceptions inherit from :class:`FablibException` so callers can
catch the base class. They also inherit from appropriate builtins
(``ValueError``, ``TimeoutError``, ``RuntimeError``) for compatibility
with existing ``except Exception:`` handlers.
"""
class FablibException(E... | fabric-testbed/fabrictestbed-extensions | fabrictestbed_extensions/fablib/exceptions.py | .py | 65a6bf6f70faa16d | 7 | 9 |
#!/usr/bin/env python3
# MIT License
#
# Copyright (c) 2020 FABRIC Testbed
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
# to ... | fabric-testbed/fabrictestbed-extensions | fabrictestbed_extensions/fablib/facility_port.py | .py | a65a8be9bd928eb3 | 8 | 9 |
#!/usr/bin/env python3
# MIT License
#
# Copyright (c) 2020 FABRIC Testbed
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
# to ... | fabric-testbed/fabrictestbed-extensions | fabrictestbed_extensions/fablib/interface.py | .py | 7a4aecbe13ea7b09 | 7 | 9 |
#!/usr/bin/env python3
# MIT License
#
# Copyright (c) 2020 FABRIC Testbed
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
# to ... | fabric-testbed/fabrictestbed-extensions | fabrictestbed_extensions/fablib/switch.py | .py | f2db90701907380f | 8 | 9 |
from __future__ import annotations
import json
from abc import abstractmethod
import jinja2
from fabrictestbed.slice_editor import UserData
from fabrictestbed_extensions.utils.utils import Utils
class TemplateMixin:
"""Mixin providing Jinja2 template rendering for FABRIC resource classes.
Subclasses may o... | fabric-testbed/fabrictestbed-extensions | fabrictestbed_extensions/fablib/template_mixin.py | .py | 117f432db3bc9763 | 8 | 9 |
#!/usr/bin/env python3
# MIT License
#
# Copyright (c) 2020 FABRIC Testbed
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
# to ... | fabric-testbed/fabrictestbed-extensions | fabrictestbed_extensions/fablib/validator.py | .py | 15f83f159bb55624 | 8 | 9 |
#!/usr/bin/env python3
# MIT License
#
# Copyright (c) 2020 FABRIC Testbed
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
# to ... | fabric-testbed/fabrictestbed-extensions | fabrictestbed_extensions/ui/artifact_manager_ui.py | .py | 3da98baa8d2574f3 | 8 | 9 |
#!/usr/bin/env python3
# MIT License
#
# Copyright (c) 2020 FABRIC Testbed
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
# to ... | fabric-testbed/fabrictestbed-extensions | fabrictestbed_extensions/utils/abc_utils.py | .py | 1f4df3ca4f53f961 | 8 | 9 |
# CephFsUtils.py
from __future__ import annotations
import json
import os
import re
from pathlib import Path
from typing import Any, Dict, List, Optional, Tuple
try:
from fabric_ceph_client import CephManagerClient
except Exception:
from fabric_ceph_client.fabric_ceph_client import CephManagerClient
class C... | fabric-testbed/fabrictestbed-extensions | fabrictestbed_extensions/utils/ceph_fs_utils.py | .py | cf30e285733192c9 | 7 | 9 |
#!/usr/bin/env python3
# MIT License
#
# Copyright (c) 2025 FABRIC Testbed
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
# to ... | fabric-testbed/fabrictestbed-extensions | fabrictestbed_extensions/utils/ceph_s3_utils.py | .py | c52d4d70f3a8deb2 | 8 | 9 |
#!/usr/bin/env python3
# MIT License
#
# Copyright (c) 2020 FABRIC Testbed
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
# to ... | fabric-testbed/fabrictestbed-extensions | fabrictestbed_extensions/utils/node.py | .py | 07428f268e425b2c | 8 | 9 |
#!/usr/bin/env python3
# MIT License
#
# Copyright (c) 2020 FABRIC Testbed
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
# to ... | fabric-testbed/fabrictestbed-extensions | fabrictestbed_extensions/utils/slice.py | .py | 35701febd70777bf | 7 | 9 |
import datetime as dt
import ftplib
import time
from functools import lru_cache
from quantilica.core.exceptions import FetchError
from quantilica.core.ftp import FTP_TRANSIENT_ERRORS, MonitoredFTP
from quantilica.core.retry import exponential_delay
try:
_RICH_AVAILABLE = True
except (ModuleNotFoundError, ImportEr... | Quantilica/datasus-fetcher | src/datasus_fetcher/fetcher.py | .py | bec5c6e955a1c359 | 7.45 | 7 |
from .storage import RemoteFile
class Slicer:
"""Filters remote files based on time and regions."""
def __init__(
self,
start_time: str = "",
end_time: str = "",
regions: list[str] | None = None,
) -> None:
"""Initializes the Slicer.
Args:
star... | Quantilica/datasus-fetcher | src/datasus_fetcher/slicer.py | .py | 158573a812f6a54e | 7.45 | 7 |
import datetime as dt
from collections.abc import Generator
from dataclasses import dataclass, field
from pathlib import Path
from quantilica.core.dates import year_month_partition
from quantilica.core.exceptions import ParseError
from quantilica.core.storage import LocalStorage, build_stamped_filename
from . import ... | Quantilica/datasus-fetcher | src/datasus_fetcher/storage.py | .py | 861234bed45afab4 | 7.45 | 7 |
from seleniumbase import BaseCase
class BaseTestCase(BaseCase):
def setUp(self):
super().setUp()
# <<< Run custom code AFTER the super() line >>>
def tearDown(self):
self.save_teardown_screenshot()
if self.has_exception():
# <<< Run custom code if the ... | mdmintz/seleniumbase-examples | examples/boilerplates/base_test_case.py | .py | 1204faf39ad3e745 | 7.09 | 14 |
"""Testing https://developsense.com/calendar/calendar.html"""
from seleniumbase import BaseCase
BaseCase.main(__name__, __file__)
class MyTestClass(BaseCase):
def test_developsense_calendar(self):
self.open("https://developsense.com/calendar/calendar.html")
self.type("#username", "Seleni... | mdmintz/seleniumbase-examples | examples/calendar_test_1.py | .py | 346e9bc23b77aecc | 8.09 | 14 |
import pytest
from seleniumbase import BaseCase
@pytest.mark.ready
class MyTestClass(BaseCase):
def test_demo_site(self):
self.open("https://seleniumbase.io/demo_page")
# Assert the title of the current web page
self.assert_title("Web Testing Page")
# Assert that th... | mdmintz/seleniumbase-examples | examples/test_demo_site.py | .py | d3ab79db805944e3 | 7.09 | 14 |
"""
Testing Drag & Drop on different pages.
"""
from seleniumbase import BaseCase
class DragAndDropTests(BaseCase):
def test_drag_and_drop(self):
self.open("seleniumbase.io")
self.js_click('a[href*="seleniumbase.io/other/drag_and_drop"]')
self.assert_element_not_visible("#div1 img#drag1")
... | mdmintz/seleniumbase-examples | examples/test_drag_and_drop.py | .py | e42277f7c66d8012 | 8.09 | 14 |
"""
This script installs the chromedriver version that matches your Chrome.
On newer versions of Python, you may replace "testdir" with "pytester".
(Run with "pytest")
"""
import subprocess
class TestUpgradeChromedriver:
def basic_run(self, testdir):
testdir.makepyfile(
"""
from se... | mdmintz/seleniumbase-examples | examples/upgrade_chromedriver.py | .py | 628eb0f39b81d9f6 | 7.59 | 14 |
#!/usr/bin/env python3
"""Publish every Markdown file under gists/ to gist.github.com.
Each file becomes one public gist. The mapping from repository path to gist ID
is recorded in gists/published.json and committed back, so a second run updates
the gists it created the first time instead of creating duplicates.
Stan... | rahul-rocket/rahul-rocket | .github/scripts/publish_gists.py | .py | d9e62b7cde856241 | 7.42 | 6 |
#!/usr/bin/env python3
"""Rewrite the Latest Gists section of README.md from the public gists API.
Called by .github/workflows/gists.yml. Writes only between the
<!--START_SECTION:gists--> and <!--END_SECTION:gists--> markers, and leaves the
file untouched when the rendered list is identical to what is already there, ... | rahul-rocket/rahul-rocket | archive/2026-08-07-v4.3.0/scripts/update_gists.py | .py | 13976f7f2f7c73ed | 7.42 | 6 |
# Copyright 2020-2024 Curtin University
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in ... | The-Academic-Observatory/academic-observatory-workflows | academic-observatory-workflows/academic_observatory_workflows/config.py | .py | e145736f3263eb9b | 7.64 | 18 |
# Copyright 2020-2024 Curtin University
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in ... | The-Academic-Observatory/academic-observatory-workflows | academic-observatory-workflows/academic_observatory_workflows/crossref_fundref_telescope/telescope.py | .py | a3b9e10ae968521b | 7.64 | 18 |
import os
from unittest.mock import patch
from typing import List
import shutil
from pathlib import Path
import pendulum
import vcr
from academic_observatory_workflows.config import project_path, TestConfig
from academic_observatory_workflows.crossref_fundref_telescope.release import CrossrefFundrefRelease
from acade... | The-Academic-Observatory/academic-observatory-workflows | academic-observatory-workflows/academic_observatory_workflows/crossref_fundref_telescope/tests/test_tasks.py | .py | 72f1f58be6ed0356 | 8.14 | 18 |
# Copyright 2020-2024 Curtin University
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in ... | The-Academic-Observatory/academic-observatory-workflows | academic-observatory-workflows/academic_observatory_workflows/crossref_fundref_telescope/tests/test_telescope.py | .py | 3ebdffd19930bc73 | 8.14 | 18 |
# Copyright 2020-2024 Curtin University
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in ... | The-Academic-Observatory/academic-observatory-workflows | academic-observatory-workflows/academic_observatory_workflows/crossref_metadata_telescope/tasks.py | .py | 8eb649fa0919bcc0 | 7.64 | 18 |
# Copyright 2020-2024 Curtin University
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in ... | The-Academic-Observatory/academic-observatory-workflows | academic-observatory-workflows/academic_observatory_workflows/crossref_metadata_telescope/telescope.py | .py | 7d76c3560cccec70 | 7.64 | 18 |
# Copyright 2020-2024 Curtin University
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in ... | The-Academic-Observatory/academic-observatory-workflows | academic-observatory-workflows/academic_observatory_workflows/crossref_metadata_telescope/tests/test_tasks.py | .py | 5a727c864fbf2336 | 7.14 | 18 |
# Copyright 2020-2024 Curtin University
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in ... | The-Academic-Observatory/academic-observatory-workflows | academic-observatory-workflows/academic_observatory_workflows/crossref_metadata_telescope/tests/test_telescope.py | .py | 2550d9a2b1f8414b | 8.14 | 18 |
# Copyright 2020-2025 Curtin University
# Copyright 2024-2025 UC Curation Center (California Digital Library)
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licen... | The-Academic-Observatory/academic-observatory-workflows | academic-observatory-workflows/academic_observatory_workflows/datacite_telescope/datacite_transform.py | .py | fa4cb0b283bea8db | 7.64 | 18 |
# Copyright 2020-2024 Curtin University
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in ... | The-Academic-Observatory/academic-observatory-workflows | academic-observatory-workflows/academic_observatory_workflows/doi_workflow/queries.py | .py | eb17e0bdf9bf4360 | 7.64 | 18 |
# Copyright 2020-2024 Curtin University
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in ... | The-Academic-Observatory/academic-observatory-workflows | academic-observatory-workflows/academic_observatory_workflows/doi_workflow/release.py | .py | 7510830f0d8f89a2 | 7.64 | 18 |
# Copyright 2020-2024 Curtin University
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in ... | The-Academic-Observatory/academic-observatory-workflows | academic-observatory-workflows/academic_observatory_workflows/doi_workflow/tasks.py | .py | 07f96944b1b22f1f | 7.64 | 18 |
import os
import unittest
from academic_observatory_workflows.config import project_path
from academic_observatory_workflows.doi_workflow.queries import get_ancestors, ror_to_ror_hierarchy_index
from observatory_platform.files import load_jsonl
FIXTURES_FOLDER = project_path("doi_workflow", "tests", "fixtures")
cla... | The-Academic-Observatory/academic-observatory-workflows | academic-observatory-workflows/academic_observatory_workflows/doi_workflow/tests/test_queries.py | .py | cedc83c114002de1 | 8.14 | 18 |
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